pyopenms 2.3.0.1__zip → 2.3.0.2__zip

media/doc/pyenv/py27_bleeding/lib/python2.7/site-packages/pyopenms/version.py

@@ -1 +1 @@
-version='2.3.0.1'
+version='2.3.0.2'

media/doc/pyenv/py27_bleeding/lib/python2.7/site-packages/pyopenms-2.3.0.2-py2.7.egg-info/PKG-INFO

@@ -0,0 +1,106 @@
+Metadata-Version: 1.1
+Name: pyopenms
+Version: 2.3.0.2
+Summary: Python wrapper for C++ LCMS library OpenMS
+Home-page: http://open-ms.de
+Author: Uwe Schmitt
+Author-email: uschmitt@mineway.de
+License: http://opensource.org/licenses/BSD-3-Clause
+Description-Content-Type: UNKNOWN
+Description: 
+        ------------
+        Introduction
+        ------------
+        
+        This package contains Python bindings for a large part of the OpenMS library
+        (http://www.openms.org) for mass spectrometry based proteomics.  It thus
+        provides providing facile access to a feature-rich, open-source algorithm
+        library for mass-spectrometry based proteomics analysis. These Python bindings
+        allow raw access to the data-structures and algorithms implemented in OpenMS,
+        specifically those for file access (mzXML, mzML, TraML, mzIdentML among
+        others), basic signal processing (smoothing, filtering, de-isotoping and
+        peak-picking) and complex data analysis (including label-free, SILAC, iTRAQ and
+        SWATH analysis tools).
+        
+        The pyOpenMS package runs - like OpenMS - on Windows, Linux and OSX.
+        
+        -----------
+        Publication
+        -----------
+        
+        The pyOpenMS bindings are described in the following publication:
+        
+          Rost HL, Schmitt U, Aebersold R and Malmstrom L.
+          pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm library.
+          Proteomics. 2014 Jan;14(1):74-7. doi: 10.1002/pmic.201300246.
+        
+        Please also check `the pyOpenMS homepage`_ for updates and links.
+        
+        ------------
+        Installation
+        ------------
+        
+        We provide binary packages for Python 3.4, 3.5 and 3.6 on Windows (64 bit) and
+        Linux (64 bit) as well as Python 2.7 for Linux, which makes the installation
+        very straightforward with pip.  For other platforms, please refer to the
+        compilation instructions.
+        
+        Binary installation
+        ===================
+        
+        The current binaries require numpy **1.7.x**.  As we distribute the package as
+        binary wheels, you should use *pip* for installation::
+        
+        $ pip install pyopenms
+        
+        Source installation
+        ===================
+        
+        Please use the `the pyOpenMS homepage`_ for instructions on how to build pyOpenMS yourself.
+        
+        ---------------------
+        Questions and Support
+        ---------------------
+        
+        For questions and feature requests, please use `the OpenMS github page`_ which
+        contains a bug tracker, a wiki and describes multiple ways to contact the
+        developers.
+        
+        ------------
+        Testing
+        ------------
+        
+        pyOpenMS provides unittests, they are found under ./pyOpenMS/tests/ and can be
+        executed using nosetests::
+        
+            $ python run_nose.py
+        
+        ------------
+        License
+        ------------
+        
+        pyOpenMS is published under the 3-clause BSD licence, see ./pyOpenMS/License.txt
+        
+        -------------
+        Documentation
+        -------------
+        
+        pyOpenMS follows the `OpenMS documentation`_ very closely. Additionally, there is also a `pyOpenMS
+        Manual <http://proteomics.ethz.ch/pyOpenMS_Manual.pdf>`_ available. The online
+        manual contains a complete record of every wrapped class and function while the
+        documentation of the corresponding class or function can be inferred from the
+        OpenMS online documentation.
+        
+        
+        
+        .. _the pyOpenMS homepage: https://github.com/OpenMS/OpenMS/wiki/pyOpenMS
+        .. _the OpenMS documentation: http://ftp.mi.fu-berlin.de/pub/OpenMS/release-documentation/html/index.html
+        .. _the OpenMS github page: https://github.com/OpenMS/OpenMS/
+        
+        
+Platform: any
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: BSD License
+Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
+Classifier: Topic :: Scientific/Engineering :: Chemistry

media/doc/pyenv/py27_bleeding/lib/python2.7/site-packages/pyopenms-2.3.0.1-py2.7.egg-info/PKG-INFO

@@ -1,27 +0,0 @@
-Metadata-Version: 1.1
-Name: pyopenms
-Version: 2.3.0.1
-Summary: Python wrapper for C++ LCMS library OpenMS
-Home-page: http://open-ms.de
-Author: Uwe Schmitt
-Author-email: uschmitt@mineway.de
-License: http://opensource.org/licenses/BSD-3-Clause
-Description-Content-Type: UNKNOWN
-Description: This package contains Python bindings for a large part of the OpenMS library
-        for mass spectrometry based proteomics.  It thus provides providing facile
-        access to a feature-rich, open-source algorithm library for mass-spectrometry
-        based proteomics analysis. These Python bindings allow raw access to the
-        data-structures and algorithms implemented in OpenMS, specifically those for
-        file access (mzXML, mzML, TraML, mzIdentML among others), basic signal
-        processing (smoothing, filtering, de-isotoping and peak-picking) and complex
-        data analysis (including label-free, SILAC, iTRAQ and SWATH analysis tools).
-        
-        Please see https://github.com/OpenMS/OpenMS/wiki/pyOpenMS for more information.
-        
-        
-Platform: any
-Classifier: Development Status :: 4 - Beta
-Classifier: Intended Audience :: Science/Research
-Classifier: License :: OSI Approved :: BSD License
-Classifier: Topic :: Scientific/Engineering :: Bio-Informatics
-Classifier: Topic :: Scientific/Engineering :: Chemistry