pyobo 0.10.12__py3-none-any.whl → 0.11.1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- pyobo/__init__.py +0 -2
- pyobo/__main__.py +0 -2
- pyobo/api/__init__.py +0 -2
- pyobo/api/alts.py +6 -7
- pyobo/api/hierarchy.py +14 -15
- pyobo/api/metadata.py +3 -4
- pyobo/api/names.py +31 -32
- pyobo/api/properties.py +6 -7
- pyobo/api/relations.py +12 -11
- pyobo/api/species.py +5 -6
- pyobo/api/typedefs.py +1 -3
- pyobo/api/utils.py +61 -5
- pyobo/api/xrefs.py +4 -5
- pyobo/aws.py +3 -5
- pyobo/cli/__init__.py +0 -2
- pyobo/cli/aws.py +0 -2
- pyobo/cli/cli.py +0 -4
- pyobo/cli/database.py +1 -3
- pyobo/cli/lookup.py +0 -2
- pyobo/cli/utils.py +0 -2
- pyobo/constants.py +1 -33
- pyobo/getters.py +19 -26
- pyobo/gilda_utils.py +19 -17
- pyobo/identifier_utils.py +10 -10
- pyobo/mocks.py +5 -6
- pyobo/normalizer.py +24 -24
- pyobo/obographs.py +8 -5
- pyobo/plugins.py +3 -4
- pyobo/py.typed +0 -0
- pyobo/reader.py +19 -21
- pyobo/registries/__init__.py +0 -2
- pyobo/registries/metaregistry.py +6 -8
- pyobo/resource_utils.py +1 -3
- pyobo/resources/__init__.py +0 -2
- pyobo/resources/ncbitaxon.py +2 -3
- pyobo/resources/ro.py +2 -4
- pyobo/resources/so.py +55 -0
- pyobo/resources/so.tsv +2604 -0
- pyobo/sources/README.md +15 -0
- pyobo/sources/__init__.py +0 -2
- pyobo/sources/agrovoc.py +3 -3
- pyobo/sources/antibodyregistry.py +2 -3
- pyobo/sources/biogrid.py +4 -4
- pyobo/sources/ccle.py +3 -4
- pyobo/sources/cgnc.py +1 -3
- pyobo/sources/chebi.py +2 -4
- pyobo/sources/chembl.py +1 -3
- pyobo/sources/civic_gene.py +2 -3
- pyobo/sources/complexportal.py +57 -20
- pyobo/sources/conso.py +2 -4
- pyobo/sources/cpt.py +1 -3
- pyobo/sources/credit.py +1 -1
- pyobo/sources/cvx.py +1 -3
- pyobo/sources/depmap.py +3 -4
- pyobo/sources/dictybase_gene.py +15 -12
- pyobo/sources/drugbank.py +6 -7
- pyobo/sources/drugbank_salt.py +3 -4
- pyobo/sources/drugcentral.py +9 -8
- pyobo/sources/expasy.py +33 -16
- pyobo/sources/famplex.py +3 -5
- pyobo/sources/flybase.py +5 -6
- pyobo/sources/geonames.py +1 -1
- pyobo/sources/gmt_utils.py +5 -6
- pyobo/sources/go.py +4 -6
- pyobo/sources/gwascentral_phenotype.py +1 -3
- pyobo/sources/gwascentral_study.py +2 -3
- pyobo/sources/hgnc.py +30 -26
- pyobo/sources/hgncgenefamily.py +9 -11
- pyobo/sources/icd10.py +3 -4
- pyobo/sources/icd11.py +3 -4
- pyobo/sources/icd_utils.py +6 -7
- pyobo/sources/interpro.py +3 -5
- pyobo/sources/itis.py +1 -3
- pyobo/sources/kegg/__init__.py +0 -2
- pyobo/sources/kegg/api.py +3 -4
- pyobo/sources/kegg/genes.py +3 -4
- pyobo/sources/kegg/genome.py +19 -9
- pyobo/sources/kegg/pathway.py +5 -6
- pyobo/sources/mesh.py +19 -21
- pyobo/sources/mgi.py +1 -3
- pyobo/sources/mirbase.py +13 -9
- pyobo/sources/mirbase_constants.py +0 -2
- pyobo/sources/mirbase_family.py +1 -3
- pyobo/sources/mirbase_mature.py +1 -3
- pyobo/sources/msigdb.py +4 -5
- pyobo/sources/ncbigene.py +3 -5
- pyobo/sources/npass.py +2 -4
- pyobo/sources/omim_ps.py +1 -3
- pyobo/sources/pathbank.py +35 -28
- pyobo/sources/pfam.py +1 -3
- pyobo/sources/pfam_clan.py +1 -3
- pyobo/sources/pid.py +3 -5
- pyobo/sources/pombase.py +7 -6
- pyobo/sources/pubchem.py +2 -3
- pyobo/sources/reactome.py +30 -11
- pyobo/sources/rgd.py +3 -4
- pyobo/sources/rhea.py +7 -8
- pyobo/sources/ror.py +3 -2
- pyobo/sources/selventa/__init__.py +0 -2
- pyobo/sources/selventa/schem.py +1 -3
- pyobo/sources/selventa/scomp.py +1 -3
- pyobo/sources/selventa/sdis.py +1 -3
- pyobo/sources/selventa/sfam.py +1 -3
- pyobo/sources/sgd.py +1 -3
- pyobo/sources/slm.py +29 -17
- pyobo/sources/umls/__init__.py +0 -2
- pyobo/sources/umls/__main__.py +0 -2
- pyobo/sources/umls/get_synonym_types.py +1 -1
- pyobo/sources/umls/umls.py +2 -4
- pyobo/sources/uniprot/__init__.py +0 -2
- pyobo/sources/uniprot/uniprot.py +11 -10
- pyobo/sources/uniprot/uniprot_ptm.py +6 -5
- pyobo/sources/utils.py +3 -5
- pyobo/sources/wikipathways.py +1 -3
- pyobo/sources/zfin.py +20 -9
- pyobo/ssg/__init__.py +3 -2
- pyobo/struct/__init__.py +0 -2
- pyobo/struct/reference.py +22 -23
- pyobo/struct/struct.py +132 -116
- pyobo/struct/typedef.py +14 -10
- pyobo/struct/utils.py +0 -2
- pyobo/utils/__init__.py +0 -2
- pyobo/utils/cache.py +14 -6
- pyobo/utils/io.py +9 -10
- pyobo/utils/iter.py +5 -6
- pyobo/utils/misc.py +1 -3
- pyobo/utils/ndex_utils.py +6 -7
- pyobo/utils/path.py +4 -5
- pyobo/version.py +3 -5
- pyobo/xrefdb/__init__.py +0 -2
- pyobo/xrefdb/canonicalizer.py +27 -18
- pyobo/xrefdb/priority.py +0 -2
- pyobo/xrefdb/sources/__init__.py +3 -4
- pyobo/xrefdb/sources/biomappings.py +0 -2
- pyobo/xrefdb/sources/cbms2019.py +0 -2
- pyobo/xrefdb/sources/chembl.py +0 -2
- pyobo/xrefdb/sources/compath.py +1 -3
- pyobo/xrefdb/sources/famplex.py +3 -5
- pyobo/xrefdb/sources/gilda.py +0 -2
- pyobo/xrefdb/sources/intact.py +5 -5
- pyobo/xrefdb/sources/ncit.py +1 -3
- pyobo/xrefdb/sources/pubchem.py +2 -5
- pyobo/xrefdb/sources/wikidata.py +2 -4
- pyobo/xrefdb/xrefs_pipeline.py +15 -16
- {pyobo-0.10.12.dist-info → pyobo-0.11.1.dist-info}/LICENSE +1 -1
- pyobo-0.11.1.dist-info/METADATA +711 -0
- pyobo-0.11.1.dist-info/RECORD +173 -0
- {pyobo-0.10.12.dist-info → pyobo-0.11.1.dist-info}/WHEEL +1 -1
- pyobo-0.11.1.dist-info/entry_points.txt +2 -0
- pyobo-0.10.12.dist-info/METADATA +0 -499
- pyobo-0.10.12.dist-info/RECORD +0 -169
- pyobo-0.10.12.dist-info/entry_points.txt +0 -15
- {pyobo-0.10.12.dist-info → pyobo-0.11.1.dist-info}/top_level.txt +0 -0
pyobo/resources/so.tsv
ADDED
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0000000 Sequence_Ontology
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0000001 region
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0000002 sequence_secondary_structure
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0000003 G_quartet
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0000004 interior_coding_exon
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0000005 satellite_DNA
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0000006 PCR_product
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0000007 read_pair
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0000008 gene_sensu_your_favorite_organism
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0000009 gene_class
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0000010 protein_coding
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0000011 non_protein_coding
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0000012 scRNA_primary_transcript
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0000013 scRNA
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0000014 INR_motif
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0000015 DPE_motif
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0000016 BREu_motif
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0000017 PSE_motif
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0000018 linkage_group
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0000020 RNA_internal_loop
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0000021 asymmetric_RNA_internal_loop
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0000022 A_minor_RNA_motif
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0000023 K_turn_RNA_motif
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0000024 sarcin_like_RNA_motif
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0000025 symmetric_RNA_internal_loop
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0000026 RNA_junction_loop
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0000027 RNA_hook_turn
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0000028 base_pair
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0000029 WC_base_pair
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0000030 sugar_edge_base_pair
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0000031 aptamer
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0000032 DNA_aptamer
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0000033 RNA_aptamer
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0000034 morpholino_oligo
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0000035 riboswitch
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0000036 matrix_attachment_site
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0000037 locus_control_region
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0000038 match_set
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0000039 match_part
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0000040 genomic_clone
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0000041 sequence_operation
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0000042 pseudogene_attribute
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0000043 processed_pseudogene
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0000044 pseudogene_by_unequal_crossing_over
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0000045 delete
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0000046 insert
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0000047 invert
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0000048 substitute
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0000049 translocate
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0000050 gene_part
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0000051 probe
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0000052 assortment_derived_deficiency
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0000053 sequence_variant_affecting_regulatory_region
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0000054 aneuploid
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0000055 hyperploid
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0000056 hypoploid
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0000057 operator
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0000058 assortment_derived_aneuploid
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0000059 nuclease_binding_site
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0000060 compound_chromosome_arm
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0000061 restriction_enzyme_binding_site
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0000062 deficient_intrachromosomal_transposition
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0000063 deficient_interchromosomal_transposition
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0000064 gene_by_transcript_attribute
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0000065 free_chromosome_arm
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0000066 gene_by_polyadenylation_attribute
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0000067 gene_to_gene_feature
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0000068 overlapping
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0000069 inside_intron
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0000070 inside_intron_antiparallel
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0000071 inside_intron_parallel
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0000072 end_overlapping_gene
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0000073 five_prime_three_prime_overlap
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0000074 five_prime_five_prime_overlap
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0000075 three_prime_three_prime_overlap
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0000076 three_prime_five_prime_overlap
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0000077 antisense
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0000078 polycistronic_transcript
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0000079 dicistronic_transcript
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0000080 operon_member
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0000081 gene_array_member
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0000082 processed_transcript_attribute
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0000083 macronuclear_sequence
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0000084 micronuclear_sequence
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0000085 gene_by_genome_location
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0000086 gene_by_organelle_of_genome
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0000087 nuclear_gene
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0000088 mt_gene
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0000089 kinetoplast_gene
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0000090 plastid_gene
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0000091 apicoplast_gene
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0000092 ct_gene
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0000093 chromoplast_gene
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0000094 cyanelle_gene
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0000095 leucoplast_gene
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0000096 proplastid_gene
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0000097 nucleomorph_gene
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0000098 plasmid_gene
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0000099 proviral_gene
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0000100 endogenous_retroviral_gene
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0000101 transposable_element
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0000102 expressed_sequence_match
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0000103 clone_insert_end
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0000104 polypeptide
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0000105 chromosome_arm
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0000106 non_capped_primary_transcript
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0000107 sequencing_primer
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0000108 mRNA_with_frameshift
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0000109 sequence_variant_obs
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0000110 sequence_feature
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0000111 transposable_element_gene
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0000112 primer
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0000113 proviral_region
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0000114 methylated_cytosine
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0000115 transcript_feature
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0000116 edited
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0000117 transcript_with_readthrough_stop_codon
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0000118 transcript_with_translational_frameshift
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0000119 regulated
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0000120 protein_coding_primary_transcript
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0000121 forward_primer
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0000122 RNA_sequence_secondary_structure
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0000123 transcriptionally_regulated
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0000124 transcriptionally_constitutive
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0000125 transcriptionally_induced
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0000126 transcriptionally_repressed
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0000127 silenced_gene
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0000128 gene_silenced_by_DNA_modification
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0000129 gene_silenced_by_DNA_methylation
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0000130 post_translationally_regulated
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0000131 translationally_regulated
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0000132 reverse_primer
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0000133 epigenetically_modified
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0000134 genomically_imprinted
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0000135 maternally_imprinted
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0000136 paternally_imprinted
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0000137 allelically_excluded
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0000138 gene_rearranged_at_DNA_level
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0000139 ribosome_entry_site
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0000140 attenuator
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0000141 terminator
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0000142 DNA_sequence_secondary_structure
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0000143 assembly_component
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0000144 primary_transcript_attribute
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0000145 recoded_codon
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0000146 capped
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0000147 exon
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0000148 supercontig
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0000149 contig
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0000150 read
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0000151 clone
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0000152 YAC
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0000153 BAC
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0000154 PAC
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0000155 plasmid
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0000156 cosmid
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0000157 phagemid
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0000158 fosmid
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0000159 deletion
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0000160 lambda_clone
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0000161 methylated_adenine
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0000162 splice_site
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0000163 five_prime_cis_splice_site
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0000164 three_prime_cis_splice_site
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0000165 enhancer
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0000166 enhancer_bound_by_factor
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0000167 promoter
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0000168 restriction_enzyme_cut_site
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0000169 RNApol_I_promoter
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0000170 RNApol_II_promoter
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0000171 RNApol_III_promoter
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0000172 CAAT_signal
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0000173 GC_rich_promoter_region
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0000174 TATA_box
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0000175 minus_10_signal
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0000176 minus_35_signal
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0000177 cross_genome_match
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0000178 operon
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0000179 clone_insert_start
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0000180 retrotransposon
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0000181 translated_nucleotide_match
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0000182 DNA_transposon
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0000183 non_transcribed_region
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0000184 U2_intron
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0000185 primary_transcript
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0000186 LTR_retrotransposon
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0000187 repeat_family
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0000188 intron
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0000189 non_LTR_retrotransposon
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0000190 five_prime_intron
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0000191 interior_intron
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0000192 three_prime_intron
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0000193 RFLP_fragment
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0000194 LINE_element
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0000195 coding_exon
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0000196 five_prime_coding_exon_coding_region
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0000197 three_prime_coding_exon_coding_region
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0000198 noncoding_exon
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0000199 translocation
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0000200 five_prime_coding_exon
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0000201 interior_exon
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0000202 three_prime_coding_exon
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0000203 UTR
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0000204 five_prime_UTR
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0000205 three_prime_UTR
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0000206 SINE_element
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0000207 simple_sequence_length_variation
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0000208 terminal_inverted_repeat_element
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0000209 rRNA_primary_transcript
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0000210 tRNA_primary_transcript
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0000211 alanine_tRNA_primary_transcript
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0000212 arginine_tRNA_primary_transcript
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0000213 asparagine_tRNA_primary_transcript
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0000214 aspartic_acid_tRNA_primary_transcript
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0000215 cysteine_tRNA_primary_transcript
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0000216 glutamic_acid_tRNA_primary_transcript
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0000217 glutamine_tRNA_primary_transcript
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0000218 glycine_tRNA_primary_transcript
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0000219 histidine_tRNA_primary_transcript
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0000220 isoleucine_tRNA_primary_transcript
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0000221 leucine_tRNA_primary_transcript
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0000222 lysine_tRNA_primary_transcript
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0000223 methionine_tRNA_primary_transcript
|
|
224
|
+
0000224 phenylalanine_tRNA_primary_transcript
|
|
225
|
+
0000225 proline_tRNA_primary_transcript
|
|
226
|
+
0000226 serine_tRNA_primary_transcript
|
|
227
|
+
0000227 threonine_tRNA_primary_transcript
|
|
228
|
+
0000228 tryptophan_tRNA_primary_transcript
|
|
229
|
+
0000229 tyrosine_tRNA_primary_transcript
|
|
230
|
+
0000230 valine_tRNA_primary_transcript
|
|
231
|
+
0000231 snRNA_primary_transcript
|
|
232
|
+
0000232 snoRNA_primary_transcript
|
|
233
|
+
0000233 mature_transcript
|
|
234
|
+
0000234 mRNA
|
|
235
|
+
0000235 TF_binding_site
|
|
236
|
+
0000236 ORF
|
|
237
|
+
0000237 transcript_attribute
|
|
238
|
+
0000238 foldback_element
|
|
239
|
+
0000239 flanking_region
|
|
240
|
+
0000240 chromosome_variation
|
|
241
|
+
0000241 internal_UTR
|
|
242
|
+
0000242 untranslated_region_polycistronic_mRNA
|
|
243
|
+
0000243 internal_ribosome_entry_site
|
|
244
|
+
0000244 four_cutter_restriction_site
|
|
245
|
+
0000245 mRNA_by_polyadenylation_status
|
|
246
|
+
0000246 polyadenylated
|
|
247
|
+
0000247 mRNA_not_polyadenylated
|
|
248
|
+
0000248 sequence_length_alteration
|
|
249
|
+
0000249 six_cutter_restriction_site
|
|
250
|
+
0000250 modified_RNA_base_feature
|
|
251
|
+
0000251 eight_cutter_restriction_site
|
|
252
|
+
0000252 rRNA
|
|
253
|
+
0000253 tRNA
|
|
254
|
+
0000254 alanyl_tRNA
|
|
255
|
+
0000255 rRNA_small_subunit_primary_transcript
|
|
256
|
+
0000256 asparaginyl_tRNA
|
|
257
|
+
0000257 aspartyl_tRNA
|
|
258
|
+
0000258 cysteinyl_tRNA
|
|
259
|
+
0000259 glutaminyl_tRNA
|
|
260
|
+
0000260 glutamyl_tRNA
|
|
261
|
+
0000261 glycyl_tRNA
|
|
262
|
+
0000262 histidyl_tRNA
|
|
263
|
+
0000263 isoleucyl_tRNA
|
|
264
|
+
0000264 leucyl_tRNA
|
|
265
|
+
0000265 lysyl_tRNA
|
|
266
|
+
0000266 methionyl_tRNA
|
|
267
|
+
0000267 phenylalanyl_tRNA
|
|
268
|
+
0000268 prolyl_tRNA
|
|
269
|
+
0000269 seryl_tRNA
|
|
270
|
+
0000270 threonyl_tRNA
|
|
271
|
+
0000271 tryptophanyl_tRNA
|
|
272
|
+
0000272 tyrosyl_tRNA
|
|
273
|
+
0000273 valyl_tRNA
|
|
274
|
+
0000274 snRNA
|
|
275
|
+
0000275 snoRNA
|
|
276
|
+
0000276 miRNA
|
|
277
|
+
0000277 bound_by_factor
|
|
278
|
+
0000278 transcript_bound_by_nucleic_acid
|
|
279
|
+
0000279 transcript_bound_by_protein
|
|
280
|
+
0000280 engineered_gene
|
|
281
|
+
0000281 engineered_foreign_gene
|
|
282
|
+
0000282 mRNA_with_minus_1_frameshift
|
|
283
|
+
0000283 engineered_foreign_transposable_element_gene
|
|
284
|
+
0000284 type_I_enzyme_restriction_site
|
|
285
|
+
0000285 foreign_gene
|
|
286
|
+
0000286 long_terminal_repeat
|
|
287
|
+
0000287 fusion_gene
|
|
288
|
+
0000288 engineered_fusion_gene
|
|
289
|
+
0000289 microsatellite
|
|
290
|
+
0000290 dinucleotide_repeat_microsatellite_feature
|
|
291
|
+
0000291 trinucleotide_repeat_microsatellite_feature
|
|
292
|
+
0000292 repetitive_element
|
|
293
|
+
0000293 engineered_foreign_repetitive_element
|
|
294
|
+
0000294 inverted_repeat
|
|
295
|
+
0000295 U12_intron
|
|
296
|
+
0000296 origin_of_replication
|
|
297
|
+
0000297 D_loop
|
|
298
|
+
0000298 recombination_feature
|
|
299
|
+
0000299 specific_recombination_site
|
|
300
|
+
0000300 recombination_feature_of_rearranged_gene
|
|
301
|
+
0000301 vertebrate_immune_system_gene_recombination_feature
|
|
302
|
+
0000302 J_gene_recombination_feature
|
|
303
|
+
0000303 clip
|
|
304
|
+
0000304 type_II_enzyme_restriction_site
|
|
305
|
+
0000305 modified_DNA_base
|
|
306
|
+
0000306 methylated_DNA_base_feature
|
|
307
|
+
0000307 CpG_island
|
|
308
|
+
0000308 sequence_feature_locating_method
|
|
309
|
+
0000309 computed_feature
|
|
310
|
+
0000310 predicted_ab_initio_computation
|
|
311
|
+
0000311 computed_feature_by_similarity
|
|
312
|
+
0000312 experimentally_determined
|
|
313
|
+
0000313 stem_loop
|
|
314
|
+
0000314 direct_repeat
|
|
315
|
+
0000315 TSS
|
|
316
|
+
0000316 CDS
|
|
317
|
+
0000317 cDNA_clone
|
|
318
|
+
0000318 start_codon
|
|
319
|
+
0000319 stop_codon
|
|
320
|
+
0000320 intronic_splice_enhancer
|
|
321
|
+
0000321 mRNA_with_plus_1_frameshift
|
|
322
|
+
0000322 nuclease_hypersensitive_site
|
|
323
|
+
0000323 coding_start
|
|
324
|
+
0000324 tag
|
|
325
|
+
0000325 rRNA_large_subunit_primary_transcript
|
|
326
|
+
0000326 SAGE_tag
|
|
327
|
+
0000327 coding_end
|
|
328
|
+
0000328 microarray_oligo
|
|
329
|
+
0000329 mRNA_with_plus_2_frameshift
|
|
330
|
+
0000330 conserved_region
|
|
331
|
+
0000331 STS
|
|
332
|
+
0000332 coding_conserved_region
|
|
333
|
+
0000333 exon_junction
|
|
334
|
+
0000334 nc_conserved_region
|
|
335
|
+
0000335 mRNA_with_minus_2_frameshift
|
|
336
|
+
0000336 pseudogene
|
|
337
|
+
0000337 RNAi_reagent
|
|
338
|
+
0000338 MITE
|
|
339
|
+
0000339 recombination_hotspot
|
|
340
|
+
0000340 chromosome
|
|
341
|
+
0000341 chromosome_band
|
|
342
|
+
0000342 site_specific_recombination_target_region
|
|
343
|
+
0000343 match
|
|
344
|
+
0000344 splice_enhancer
|
|
345
|
+
0000345 EST
|
|
346
|
+
0000346 loxP_site
|
|
347
|
+
0000347 nucleotide_match
|
|
348
|
+
0000348 nucleic_acid
|
|
349
|
+
0000349 protein_match
|
|
350
|
+
0000350 FRT_site
|
|
351
|
+
0000351 synthetic_sequence
|
|
352
|
+
0000352 DNA
|
|
353
|
+
0000353 sequence_assembly
|
|
354
|
+
0000354 group_1_intron_homing_endonuclease_target_region
|
|
355
|
+
0000355 haplotype_block
|
|
356
|
+
0000356 RNA
|
|
357
|
+
0000357 flanked
|
|
358
|
+
0000359 floxed
|
|
359
|
+
0000360 codon
|
|
360
|
+
0000361 FRT_flanked
|
|
361
|
+
0000362 invalidated_by_chimeric_cDNA
|
|
362
|
+
0000363 floxed_gene
|
|
363
|
+
0000364 transposable_element_flanking_region
|
|
364
|
+
0000365 integron
|
|
365
|
+
0000366 insertion_site
|
|
366
|
+
0000367 attI_site
|
|
367
|
+
0000368 transposable_element_insertion_site
|
|
368
|
+
0000369 integrase_coding_region
|
|
369
|
+
0000370 small_regulatory_ncRNA
|
|
370
|
+
0000371 conjugative_transposon
|
|
371
|
+
0000372 enzymatic_RNA
|
|
372
|
+
0000373 recombinationally_inverted_gene
|
|
373
|
+
0000374 ribozyme
|
|
374
|
+
0000375 cytosolic_5_8S_rRNA
|
|
375
|
+
0000376 RNA_6S
|
|
376
|
+
0000377 CsrB_RsmB_RNA
|
|
377
|
+
0000378 DsrA_RNA
|
|
378
|
+
0000379 GcvB_RNA
|
|
379
|
+
0000380 hammerhead_ribozyme
|
|
380
|
+
0000381 group_IIA_intron
|
|
381
|
+
0000382 group_IIB_intron
|
|
382
|
+
0000383 MicF_RNA
|
|
383
|
+
0000384 OxyS_RNA
|
|
384
|
+
0000385 RNase_MRP_RNA
|
|
385
|
+
0000386 RNase_P_RNA
|
|
386
|
+
0000387 RprA_RNA
|
|
387
|
+
0000388 RRE_RNA
|
|
388
|
+
0000389 spot_42_RNA
|
|
389
|
+
0000390 telomerase_RNA
|
|
390
|
+
0000391 U1_snRNA
|
|
391
|
+
0000392 U2_snRNA
|
|
392
|
+
0000393 U4_snRNA
|
|
393
|
+
0000394 U4atac_snRNA
|
|
394
|
+
0000395 U5_snRNA
|
|
395
|
+
0000396 U6_snRNA
|
|
396
|
+
0000397 U6atac_snRNA
|
|
397
|
+
0000398 U11_snRNA
|
|
398
|
+
0000399 U12_snRNA
|
|
399
|
+
0000400 sequence_attribute
|
|
400
|
+
0000401 gene_attribute
|
|
401
|
+
0000402 enhancer_attribute
|
|
402
|
+
0000403 U14_snoRNA
|
|
403
|
+
0000404 vault_RNA
|
|
404
|
+
0000405 Y_RNA
|
|
405
|
+
0000406 twintron
|
|
406
|
+
0000407 cytosolic_18S_rRNA
|
|
407
|
+
0000408 site
|
|
408
|
+
0000409 binding_site
|
|
409
|
+
0000410 protein_binding_site
|
|
410
|
+
0000411 rescue_region
|
|
411
|
+
0000412 restriction_fragment
|
|
412
|
+
0000413 sequence_difference
|
|
413
|
+
0000414 invalidated_by_genomic_contamination
|
|
414
|
+
0000415 invalidated_by_genomic_polyA_primed_cDNA
|
|
415
|
+
0000416 invalidated_by_partial_processing
|
|
416
|
+
0000417 polypeptide_domain
|
|
417
|
+
0000418 signal_peptide
|
|
418
|
+
0000419 mature_protein_region
|
|
419
|
+
0000420 five_prime_terminal_inverted_repeat
|
|
420
|
+
0000421 three_prime_terminal_inverted_repeat
|
|
421
|
+
0000422 U5_LTR_region
|
|
422
|
+
0000423 R_LTR_region
|
|
423
|
+
0000424 U3_LTR_region
|
|
424
|
+
0000425 five_prime_LTR
|
|
425
|
+
0000426 three_prime_LTR
|
|
426
|
+
0000427 R_five_prime_LTR_region
|
|
427
|
+
0000428 U5_five_prime_LTR_region
|
|
428
|
+
0000429 U3_five_prime_LTR_region
|
|
429
|
+
0000430 R_three_prime_LTR_region
|
|
430
|
+
0000431 U3_three_prime_LTR_region
|
|
431
|
+
0000432 U5_three_prime_LTR_region
|
|
432
|
+
0000433 non_LTR_retrotransposon_polymeric_tract
|
|
433
|
+
0000434 target_site_duplication
|
|
434
|
+
0000435 RR_tract
|
|
435
|
+
0000436 ARS
|
|
436
|
+
0000437 assortment_derived_duplication
|
|
437
|
+
0000438 gene_not_polyadenylated
|
|
438
|
+
0000439 inverted_ring_chromosome
|
|
439
|
+
0000440 vector_replicon
|
|
440
|
+
0000441 ss_oligo
|
|
441
|
+
0000442 ds_oligo
|
|
442
|
+
0000443 polymer_attribute
|
|
443
|
+
0000444 three_prime_noncoding_exon
|
|
444
|
+
0000445 five_prime_noncoding_exon
|
|
445
|
+
0000446 UTR_intron
|
|
446
|
+
0000447 five_prime_UTR_intron
|
|
447
|
+
0000448 three_prime_UTR_intron
|
|
448
|
+
0000449 random_sequence
|
|
449
|
+
0000450 interband
|
|
450
|
+
0000451 gene_with_polyadenylated_mRNA
|
|
451
|
+
0000452 transgene_attribute
|
|
452
|
+
0000453 chromosomal_transposition
|
|
453
|
+
0000454 rasiRNA
|
|
454
|
+
0000455 gene_with_mRNA_with_frameshift
|
|
455
|
+
0000456 recombinationally_rearranged_gene
|
|
456
|
+
0000457 interchromosomal_duplication
|
|
457
|
+
0000458 D_gene_segment
|
|
458
|
+
0000459 gene_with_trans_spliced_transcript
|
|
459
|
+
0000460 vertebrate_immunoglobulin_T_cell_receptor_segment
|
|
460
|
+
0000461 inversion_derived_bipartite_deficiency
|
|
461
|
+
0000462 pseudogenic_region
|
|
462
|
+
0000463 encodes_alternately_spliced_transcripts
|
|
463
|
+
0000464 decayed_exon
|
|
464
|
+
0000465 inversion_derived_deficiency_plus_duplication
|
|
465
|
+
0000466 V_gene_segment
|
|
466
|
+
0000467 post_translationally_regulated_by_protein_stability
|
|
467
|
+
0000468 golden_path_fragment
|
|
468
|
+
0000469 post_translationally_regulated_by_protein_modification
|
|
469
|
+
0000470 J_gene_segment
|
|
470
|
+
0000471 autoregulated
|
|
471
|
+
0000472 tiling_path
|
|
472
|
+
0000473 negatively_autoregulated
|
|
473
|
+
0000474 tiling_path_fragment
|
|
474
|
+
0000475 positively_autoregulated
|
|
475
|
+
0000476 contig_read
|
|
476
|
+
0000477 polycistronic_gene
|
|
477
|
+
0000478 C_gene_segment
|
|
478
|
+
0000479 trans_spliced_transcript
|
|
479
|
+
0000480 tiling_path_clone
|
|
480
|
+
0000481 terminal_inverted_repeat
|
|
481
|
+
0000482 vertebrate_immunoglobulin_T_cell_receptor_gene_cluster
|
|
482
|
+
0000483 nc_primary_transcript
|
|
483
|
+
0000484 three_prime_coding_exon_noncoding_region
|
|
484
|
+
0000485 DJ_J_cluster
|
|
485
|
+
0000486 five_prime_coding_exon_noncoding_region
|
|
486
|
+
0000487 VDJ_J_C_cluster
|
|
487
|
+
0000488 VDJ_J_cluster
|
|
488
|
+
0000489 VJ_C_cluster
|
|
489
|
+
0000490 VJ_J_C_cluster
|
|
490
|
+
0000491 VJ_J_cluster
|
|
491
|
+
0000492 D_gene_recombination_feature
|
|
492
|
+
0000493 three_prime_D_heptamer
|
|
493
|
+
0000494 three_prime_D_nonamer
|
|
494
|
+
0000495 three_prime_D_spacer
|
|
495
|
+
0000496 five_prime_D_heptamer
|
|
496
|
+
0000497 five_prime_D_nonamer
|
|
497
|
+
0000498 five_prime_D_spacer
|
|
498
|
+
0000499 virtual_sequence
|
|
499
|
+
0000500 Hoogsteen_base_pair
|
|
500
|
+
0000501 reverse_Hoogsteen_base_pair
|
|
501
|
+
0000502 transcribed_region
|
|
502
|
+
0000503 alternately_spliced_gene_encodeing_one_transcript
|
|
503
|
+
0000504 D_DJ_C_cluster
|
|
504
|
+
0000505 D_DJ_cluster
|
|
505
|
+
0000506 D_DJ_J_C_cluster
|
|
506
|
+
0000507 pseudogenic_exon
|
|
507
|
+
0000508 D_DJ_J_cluster
|
|
508
|
+
0000509 D_J_C_cluster
|
|
509
|
+
0000510 VD_gene_segment
|
|
510
|
+
0000511 J_C_cluster
|
|
511
|
+
0000512 inversion_derived_deficiency_plus_aneuploid
|
|
512
|
+
0000513 J_cluster
|
|
513
|
+
0000514 J_nonamer
|
|
514
|
+
0000515 J_heptamer
|
|
515
|
+
0000516 pseudogenic_transcript
|
|
516
|
+
0000517 J_spacer
|
|
517
|
+
0000518 V_DJ_cluster
|
|
518
|
+
0000519 V_DJ_J_cluster
|
|
519
|
+
0000520 V_VDJ_C_cluster
|
|
520
|
+
0000521 V_VDJ_cluster
|
|
521
|
+
0000522 V_VDJ_J_cluster
|
|
522
|
+
0000523 V_VJ_C_cluster
|
|
523
|
+
0000524 V_VJ_cluster
|
|
524
|
+
0000525 V_VJ_J_cluster
|
|
525
|
+
0000526 V_cluster
|
|
526
|
+
0000527 V_D_DJ_C_cluster
|
|
527
|
+
0000528 V_D_DJ_cluster
|
|
528
|
+
0000529 V_D_DJ_J_C_cluster
|
|
529
|
+
0000530 V_D_DJ_J_cluster
|
|
530
|
+
0000531 V_D_J_C_cluster
|
|
531
|
+
0000532 V_D_J_cluster
|
|
532
|
+
0000533 V_heptamer
|
|
533
|
+
0000534 V_J_cluster
|
|
534
|
+
0000535 V_J_C_cluster
|
|
535
|
+
0000536 V_nonamer
|
|
536
|
+
0000537 V_spacer
|
|
537
|
+
0000538 V_gene_recombination_feature
|
|
538
|
+
0000539 DJ_C_cluster
|
|
539
|
+
0000540 DJ_J_C_cluster
|
|
540
|
+
0000541 VDJ_C_cluster
|
|
541
|
+
0000542 V_DJ_C_cluster
|
|
542
|
+
0000543 alternately_spliced_gene_encoding_greater_than_one_transcript
|
|
543
|
+
0000544 helitron
|
|
544
|
+
0000545 recoding_pseudoknot
|
|
545
|
+
0000546 designed_sequence
|
|
546
|
+
0000547 inversion_derived_bipartite_duplication
|
|
547
|
+
0000548 gene_with_edited_transcript
|
|
548
|
+
0000549 inversion_derived_duplication_plus_aneuploid
|
|
549
|
+
0000550 aneuploid_chromosome
|
|
550
|
+
0000551 polyA_signal_sequence
|
|
551
|
+
0000552 Shine_Dalgarno_sequence
|
|
552
|
+
0000553 polyA_site
|
|
553
|
+
0000554 assortment_derived_deficiency_plus_duplication
|
|
554
|
+
0000555 five_prime_clip
|
|
555
|
+
0000556 five_prime_D_recombination_signal_sequence
|
|
556
|
+
0000557 three_prime_clip
|
|
557
|
+
0000558 C_cluster
|
|
558
|
+
0000559 D_cluster
|
|
559
|
+
0000560 D_J_cluster
|
|
560
|
+
0000561 heptamer_of_recombination_feature_of_vertebrate_immune_system_gene
|
|
561
|
+
0000562 nonamer_of_recombination_feature_of_vertebrate_immune_system_gene
|
|
562
|
+
0000563 vertebrate_immune_system_gene_recombination_spacer
|
|
563
|
+
0000564 V_DJ_J_C_cluster
|
|
564
|
+
0000565 V_VDJ_J_C_cluster
|
|
565
|
+
0000566 V_VJ_J_C_cluster
|
|
566
|
+
0000567 inversion_derived_aneuploid_chromosome
|
|
567
|
+
0000568 bidirectional_promoter
|
|
568
|
+
0000569 retrotransposed
|
|
569
|
+
0000570 three_prime_D_recombination_signal_sequence
|
|
570
|
+
0000571 miRNA_encoding
|
|
571
|
+
0000572 DJ_gene_segment
|
|
572
|
+
0000573 rRNA_encoding
|
|
573
|
+
0000574 VDJ_gene_segment
|
|
574
|
+
0000575 scRNA_encoding
|
|
575
|
+
0000576 VJ_gene_segment
|
|
576
|
+
0000577 centromere
|
|
577
|
+
0000578 snoRNA_encoding
|
|
578
|
+
0000579 edited_transcript_feature
|
|
579
|
+
0000580 methylation_guide_snoRNA_primary_transcript
|
|
580
|
+
0000581 cap
|
|
581
|
+
0000582 rRNA_cleavage_snoRNA_primary_transcript
|
|
582
|
+
0000583 pre_edited_region
|
|
583
|
+
0000584 tmRNA
|
|
584
|
+
0000585 C_D_box_snoRNA_encoding
|
|
585
|
+
0000586 tmRNA_primary_transcript
|
|
586
|
+
0000587 group_I_intron
|
|
587
|
+
0000588 autocatalytically_spliced_intron
|
|
588
|
+
0000589 SRP_RNA_primary_transcript
|
|
589
|
+
0000590 SRP_RNA
|
|
590
|
+
0000591 pseudoknot
|
|
591
|
+
0000592 H_pseudoknot
|
|
592
|
+
0000593 C_D_box_snoRNA
|
|
593
|
+
0000594 H_ACA_box_snoRNA
|
|
594
|
+
0000595 C_D_box_snoRNA_primary_transcript
|
|
595
|
+
0000596 H_ACA_box_snoRNA_primary_transcript
|
|
596
|
+
0000597 transcript_edited_by_U_insertion/deletion
|
|
597
|
+
0000598 edited_by_C_insertion_and_dinucleotide_insertion
|
|
598
|
+
0000599 edited_by_C_to_U_substitution
|
|
599
|
+
0000600 edited_by_A_to_I_substitution
|
|
600
|
+
0000601 edited_by_G_addition
|
|
601
|
+
0000602 guide_RNA
|
|
602
|
+
0000603 group_II_intron
|
|
603
|
+
0000604 editing_block
|
|
604
|
+
0000605 intergenic_region
|
|
605
|
+
0000606 editing_domain
|
|
606
|
+
0000607 unedited_region
|
|
607
|
+
0000608 H_ACA_box_snoRNA_encoding
|
|
608
|
+
0000609 oligo_U_tail
|
|
609
|
+
0000610 polyA_sequence
|
|
610
|
+
0000611 branch_site
|
|
611
|
+
0000612 polypyrimidine_tract
|
|
612
|
+
0000613 bacterial_RNApol_promoter
|
|
613
|
+
0000614 bacterial_terminator
|
|
614
|
+
0000615 terminator_of_type_2_RNApol_III_promoter
|
|
615
|
+
0000616 transcription_end_site
|
|
616
|
+
0000617 RNApol_III_promoter_type_1
|
|
617
|
+
0000618 RNApol_III_promoter_type_2
|
|
618
|
+
0000619 A_box
|
|
619
|
+
0000620 B_box
|
|
620
|
+
0000621 RNApol_III_promoter_type_3
|
|
621
|
+
0000622 C_box
|
|
622
|
+
0000623 snRNA_encoding
|
|
623
|
+
0000624 telomere
|
|
624
|
+
0000625 silencer
|
|
625
|
+
0000626 chromosomal_regulatory_element
|
|
626
|
+
0000627 insulator
|
|
627
|
+
0000628 chromosomal_structural_element
|
|
628
|
+
0000629 five_prime_open_reading_frame
|
|
629
|
+
0000630 upstream_AUG_codon
|
|
630
|
+
0000631 polycistronic_primary_transcript
|
|
631
|
+
0000632 monocistronic_primary_transcript
|
|
632
|
+
0000633 monocistronic_mRNA
|
|
633
|
+
0000634 polycistronic_mRNA
|
|
634
|
+
0000635 mini_exon_donor_RNA
|
|
635
|
+
0000636 spliced_leader_RNA
|
|
636
|
+
0000637 engineered_plasmid
|
|
637
|
+
0000638 transcribed_spacer_region
|
|
638
|
+
0000639 internal_transcribed_spacer_region
|
|
639
|
+
0000640 external_transcribed_spacer_region
|
|
640
|
+
0000641 tetranucleotide_repeat_microsatellite_feature
|
|
641
|
+
0000642 SRP_RNA_encoding
|
|
642
|
+
0000643 minisatellite
|
|
643
|
+
0000644 antisense_RNA
|
|
644
|
+
0000645 antisense_primary_transcript
|
|
645
|
+
0000646 siRNA
|
|
646
|
+
0000647 miRNA_primary_transcript
|
|
647
|
+
0000650 cytosolic_SSU_rRNA
|
|
648
|
+
0000651 cytosolic_LSU_rRNA
|
|
649
|
+
0000652 cytosolic_5S_rRNA
|
|
650
|
+
0000653 cytosolic_28S_rRNA
|
|
651
|
+
0000654 maxicircle_gene
|
|
652
|
+
0000655 ncRNA
|
|
653
|
+
0000656 stRNA_encoding
|
|
654
|
+
0000657 repeat_region
|
|
655
|
+
0000658 dispersed_repeat
|
|
656
|
+
0000659 tmRNA_encoding
|
|
657
|
+
0000660 DNA_invertase_target_sequence
|
|
658
|
+
0000661 intron_attribute
|
|
659
|
+
0000662 spliceosomal_intron
|
|
660
|
+
0000663 tRNA_encoding
|
|
661
|
+
0000664 introgressed_chromosome_region
|
|
662
|
+
0000665 monocistronic_transcript
|
|
663
|
+
0000666 mobile_intron
|
|
664
|
+
0000667 insertion
|
|
665
|
+
0000668 EST_match
|
|
666
|
+
0000669 sequence_rearrangement_feature
|
|
667
|
+
0000670 chromosome_breakage_sequence
|
|
668
|
+
0000671 internal_eliminated_sequence
|
|
669
|
+
0000672 macronucleus_destined_segment
|
|
670
|
+
0000673 transcript
|
|
671
|
+
0000674 non_canonical_splice_site
|
|
672
|
+
0000675 canonical_splice_site
|
|
673
|
+
0000676 canonical_three_prime_splice_site
|
|
674
|
+
0000677 canonical_five_prime_splice_site
|
|
675
|
+
0000678 non_canonical_three_prime_splice_site
|
|
676
|
+
0000679 non_canonical_five_prime_splice_site
|
|
677
|
+
0000680 non_canonical_start_codon
|
|
678
|
+
0000681 aberrant_processed_transcript
|
|
679
|
+
0000682 splicing_feature
|
|
680
|
+
0000683 exonic_splice_enhancer
|
|
681
|
+
0000684 nuclease_sensitive_site
|
|
682
|
+
0000685 DNaseI_hypersensitive_site
|
|
683
|
+
0000686 translocation_element
|
|
684
|
+
0000687 deletion_junction
|
|
685
|
+
0000688 golden_path
|
|
686
|
+
0000689 cDNA_match
|
|
687
|
+
0000690 gene_with_polycistronic_transcript
|
|
688
|
+
0000691 cleaved_initiator_methionine
|
|
689
|
+
0000692 gene_with_dicistronic_transcript
|
|
690
|
+
0000693 gene_with_recoded_mRNA
|
|
691
|
+
0000694 SNP
|
|
692
|
+
0000695 reagent
|
|
693
|
+
0000696 oligo
|
|
694
|
+
0000697 gene_with_stop_codon_read_through
|
|
695
|
+
0000698 gene_with_stop_codon_redefined_as_pyrrolysine
|
|
696
|
+
0000699 junction
|
|
697
|
+
0000700 remark
|
|
698
|
+
0000701 possible_base_call_error
|
|
699
|
+
0000702 possible_assembly_error
|
|
700
|
+
0000703 experimental_result_region
|
|
701
|
+
0000704 gene
|
|
702
|
+
0000705 tandem_repeat
|
|
703
|
+
0000706 trans_splice_acceptor_site
|
|
704
|
+
0000707 trans_splice_donor_site
|
|
705
|
+
0000708 SL1_acceptor_site
|
|
706
|
+
0000709 SL2_acceptor_site
|
|
707
|
+
0000710 gene_with_stop_codon_redefined_as_selenocysteine
|
|
708
|
+
0000711 gene_with_mRNA_recoded_by_translational_bypass
|
|
709
|
+
0000712 gene_with_transcript_with_translational_frameshift
|
|
710
|
+
0000713 DNA_motif
|
|
711
|
+
0000714 nucleotide_motif
|
|
712
|
+
0000715 RNA_motif
|
|
713
|
+
0000716 dicistronic_mRNA
|
|
714
|
+
0000717 reading_frame
|
|
715
|
+
0000718 blocked_reading_frame
|
|
716
|
+
0000719 ultracontig
|
|
717
|
+
0000720 foreign_transposable_element
|
|
718
|
+
0000721 gene_with_dicistronic_primary_transcript
|
|
719
|
+
0000722 gene_with_dicistronic_mRNA
|
|
720
|
+
0000723 iDNA
|
|
721
|
+
0000724 oriT
|
|
722
|
+
0000725 transit_peptide
|
|
723
|
+
0000726 repeat_unit
|
|
724
|
+
0000727 cis_regulatory_module
|
|
725
|
+
0000728 intein
|
|
726
|
+
0000729 intein_containing
|
|
727
|
+
0000730 gap
|
|
728
|
+
0000731 fragmentary
|
|
729
|
+
0000732 predicted
|
|
730
|
+
0000733 feature_attribute
|
|
731
|
+
0000734 exemplar_mRNA
|
|
732
|
+
0000735 sequence_location
|
|
733
|
+
0000736 organelle_sequence
|
|
734
|
+
0000737 mitochondrial_sequence
|
|
735
|
+
0000738 nuclear_sequence
|
|
736
|
+
0000739 nucleomorphic_sequence
|
|
737
|
+
0000740 plastid_sequence
|
|
738
|
+
0000741 kinetoplast
|
|
739
|
+
0000742 maxicircle
|
|
740
|
+
0000743 apicoplast_sequence
|
|
741
|
+
0000744 chromoplast_sequence
|
|
742
|
+
0000745 chloroplast_sequence
|
|
743
|
+
0000746 cyanelle_sequence
|
|
744
|
+
0000747 leucoplast_sequence
|
|
745
|
+
0000748 proplastid_sequence
|
|
746
|
+
0000749 plasmid_location
|
|
747
|
+
0000750 amplification_origin
|
|
748
|
+
0000751 proviral_location
|
|
749
|
+
0000752 gene_group_regulatory_region
|
|
750
|
+
0000753 clone_insert
|
|
751
|
+
0000754 lambda_vector
|
|
752
|
+
0000755 plasmid_vector
|
|
753
|
+
0000756 cDNA
|
|
754
|
+
0000757 single_stranded_cDNA
|
|
755
|
+
0000758 double_stranded_cDNA
|
|
756
|
+
0000759 plasmid_clone
|
|
757
|
+
0000760 YAC_clone
|
|
758
|
+
0000761 phagemid_clone
|
|
759
|
+
0000762 PAC_clone
|
|
760
|
+
0000763 fosmid_clone
|
|
761
|
+
0000764 BAC_clone
|
|
762
|
+
0000765 cosmid_clone
|
|
763
|
+
0000766 pyrrolysyl_tRNA
|
|
764
|
+
0000767 clone_insert_start
|
|
765
|
+
0000768 episome
|
|
766
|
+
0000769 tmRNA_coding_piece
|
|
767
|
+
0000770 tmRNA_acceptor_piece
|
|
768
|
+
0000771 QTL
|
|
769
|
+
0000772 genomic_island
|
|
770
|
+
0000773 pathogenic_island
|
|
771
|
+
0000774 metabolic_island
|
|
772
|
+
0000775 adaptive_island
|
|
773
|
+
0000776 symbiosis_island
|
|
774
|
+
0000777 pseudogenic_rRNA
|
|
775
|
+
0000778 pseudogenic_tRNA
|
|
776
|
+
0000779 engineered_episome
|
|
777
|
+
0000780 transposable_element_attribute
|
|
778
|
+
0000781 transgenic
|
|
779
|
+
0000782 natural
|
|
780
|
+
0000783 engineered
|
|
781
|
+
0000784 foreign
|
|
782
|
+
0000785 cloned_region
|
|
783
|
+
0000786 reagent_attribute
|
|
784
|
+
0000787 clone_attribute
|
|
785
|
+
0000788 cloned
|
|
786
|
+
0000789 validated
|
|
787
|
+
0000790 invalidated
|
|
788
|
+
0000791 cloned_genomic
|
|
789
|
+
0000792 cloned_cDNA
|
|
790
|
+
0000793 engineered_DNA
|
|
791
|
+
0000794 engineered_rescue_region
|
|
792
|
+
0000795 rescue_mini_gene
|
|
793
|
+
0000796 transgenic_transposable_element
|
|
794
|
+
0000797 natural_transposable_element
|
|
795
|
+
0000798 engineered_transposable_element
|
|
796
|
+
0000799 engineered_foreign_transposable_element
|
|
797
|
+
0000800 assortment_derived_duplication
|
|
798
|
+
0000801 assortment_derived_deficiency_plus_duplication
|
|
799
|
+
0000802 assortment_derived_deficiency
|
|
800
|
+
0000803 assortment_derived_aneuploid
|
|
801
|
+
0000804 engineered_region
|
|
802
|
+
0000805 engineered_foreign_region
|
|
803
|
+
0000806 fusion
|
|
804
|
+
0000807 engineered_tag
|
|
805
|
+
0000808 validated_cDNA_clone
|
|
806
|
+
0000809 invalidated_cDNA_clone
|
|
807
|
+
0000810 chimeric_cDNA_clone
|
|
808
|
+
0000811 genomically_contaminated_cDNA_clone
|
|
809
|
+
0000812 polyA_primed_cDNA_clone
|
|
810
|
+
0000813 partially_processed_cDNA_clone
|
|
811
|
+
0000814 rescue
|
|
812
|
+
0000815 mini_gene
|
|
813
|
+
0000816 rescue_gene
|
|
814
|
+
0000817 wild_type
|
|
815
|
+
0000818 wild_type_rescue_gene
|
|
816
|
+
0000819 mitochondrial_chromosome
|
|
817
|
+
0000820 chloroplast_chromosome
|
|
818
|
+
0000821 chromoplast_chromosome
|
|
819
|
+
0000822 cyanelle_chromosome
|
|
820
|
+
0000823 leucoplast_chromosome
|
|
821
|
+
0000824 macronuclear_chromosome
|
|
822
|
+
0000825 micronuclear_chromosome
|
|
823
|
+
0000828 nuclear_chromosome
|
|
824
|
+
0000829 nucleomorphic_chromosome
|
|
825
|
+
0000830 chromosome_part
|
|
826
|
+
0000831 gene_member_region
|
|
827
|
+
0000832 promoter_region
|
|
828
|
+
0000833 transcript_region
|
|
829
|
+
0000834 mature_transcript_region
|
|
830
|
+
0000835 primary_transcript_region
|
|
831
|
+
0000836 mRNA_region
|
|
832
|
+
0000837 UTR_region
|
|
833
|
+
0000838 rRNA_primary_transcript_region
|
|
834
|
+
0000839 polypeptide_region
|
|
835
|
+
0000840 repeat_component
|
|
836
|
+
0000841 spliceosomal_intron_region
|
|
837
|
+
0000842 gene_component_region
|
|
838
|
+
0000843 bacterial_RNApol_promoter_region
|
|
839
|
+
0000844 RNApol_II_promoter_region
|
|
840
|
+
0000845 RNApol_III_promoter_type_1_region
|
|
841
|
+
0000846 RNApol_III_promoter_type_2_region
|
|
842
|
+
0000847 tmRNA_region
|
|
843
|
+
0000848 LTR_component
|
|
844
|
+
0000849 three_prime_LTR_component
|
|
845
|
+
0000850 five_prime_LTR_component
|
|
846
|
+
0000851 CDS_region
|
|
847
|
+
0000852 exon_region
|
|
848
|
+
0000853 homologous_region
|
|
849
|
+
0000854 paralogous_region
|
|
850
|
+
0000855 orthologous_region
|
|
851
|
+
0000856 conserved
|
|
852
|
+
0000857 homologous
|
|
853
|
+
0000858 orthologous
|
|
854
|
+
0000859 paralogous
|
|
855
|
+
0000860 syntenic
|
|
856
|
+
0000861 capped_primary_transcript
|
|
857
|
+
0000862 capped_mRNA
|
|
858
|
+
0000863 mRNA_attribute
|
|
859
|
+
0000864 exemplar
|
|
860
|
+
0000865 frameshift
|
|
861
|
+
0000866 minus_1_frameshift
|
|
862
|
+
0000867 minus_2_frameshift
|
|
863
|
+
0000868 plus_1_frameshift
|
|
864
|
+
0000869 plus_2_framshift
|
|
865
|
+
0000870 trans_spliced
|
|
866
|
+
0000871 polyadenylated_mRNA
|
|
867
|
+
0000872 trans_spliced_mRNA
|
|
868
|
+
0000873 edited_transcript
|
|
869
|
+
0000874 edited_transcript_by_A_to_I_substitution
|
|
870
|
+
0000875 bound_by_protein
|
|
871
|
+
0000876 bound_by_nucleic_acid
|
|
872
|
+
0000877 alternatively_spliced
|
|
873
|
+
0000878 monocistronic
|
|
874
|
+
0000879 dicistronic
|
|
875
|
+
0000880 polycistronic
|
|
876
|
+
0000881 recoded
|
|
877
|
+
0000882 codon_redefined
|
|
878
|
+
0000883 stop_codon_read_through
|
|
879
|
+
0000884 stop_codon_redefined_as_pyrrolysine
|
|
880
|
+
0000885 stop_codon_redefined_as_selenocysteine
|
|
881
|
+
0000886 recoded_by_translational_bypass
|
|
882
|
+
0000887 translationally_frameshifted
|
|
883
|
+
0000888 maternally_imprinted_gene
|
|
884
|
+
0000889 paternally_imprinted_gene
|
|
885
|
+
0000890 post_translationally_regulated_gene
|
|
886
|
+
0000891 negatively_autoregulated_gene
|
|
887
|
+
0000892 positively_autoregulated_gene
|
|
888
|
+
0000893 silenced
|
|
889
|
+
0000894 silenced_by_DNA_modification
|
|
890
|
+
0000895 silenced_by_DNA_methylation
|
|
891
|
+
0000896 translationally_regulated_gene
|
|
892
|
+
0000897 allelically_excluded_gene
|
|
893
|
+
0000898 epigenetically_modified_gene
|
|
894
|
+
0000899 nuclear_mitochondrial
|
|
895
|
+
0000900 processed
|
|
896
|
+
0000901 unequally_crossed_over
|
|
897
|
+
0000902 transgene
|
|
898
|
+
0000903 endogenous_retroviral_sequence
|
|
899
|
+
0000904 rearranged_at_DNA_level
|
|
900
|
+
0000905 status
|
|
901
|
+
0000906 independently_known
|
|
902
|
+
0000907 supported_by_sequence_similarity
|
|
903
|
+
0000908 supported_by_domain_match
|
|
904
|
+
0000909 supported_by_EST_or_cDNA
|
|
905
|
+
0000910 orphan
|
|
906
|
+
0000911 predicted_by_ab_initio_computation
|
|
907
|
+
0000912 asx_turn
|
|
908
|
+
0000913 cloned_cDNA_insert
|
|
909
|
+
0000914 cloned_genomic_insert
|
|
910
|
+
0000915 engineered_insert
|
|
911
|
+
0000916 edit_operation
|
|
912
|
+
0000917 insert_U
|
|
913
|
+
0000918 delete_U
|
|
914
|
+
0000919 substitute_A_to_I
|
|
915
|
+
0000920 insert_C
|
|
916
|
+
0000921 insert_dinucleotide
|
|
917
|
+
0000922 substitute_C_to_U
|
|
918
|
+
0000923 insert_G
|
|
919
|
+
0000924 insert_GC
|
|
920
|
+
0000925 insert_GU
|
|
921
|
+
0000926 insert_CU
|
|
922
|
+
0000927 insert_AU
|
|
923
|
+
0000928 insert_AA
|
|
924
|
+
0000929 edited_mRNA
|
|
925
|
+
0000930 guide_RNA_region
|
|
926
|
+
0000931 anchor_region
|
|
927
|
+
0000932 pre_edited_mRNA
|
|
928
|
+
0000933 intermediate
|
|
929
|
+
0000934 miRNA_target_site
|
|
930
|
+
0000935 edited_CDS
|
|
931
|
+
0000936 vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment
|
|
932
|
+
0000937 vertebrate_immune_system_feature
|
|
933
|
+
0000938 vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster
|
|
934
|
+
0000939 vertebrate_immune_system_gene_recombination_signal_feature
|
|
935
|
+
0000940 recombinationally_rearranged
|
|
936
|
+
0000941 recombinationally_rearranged_vertebrate_immune_system_gene
|
|
937
|
+
0000942 attP_site
|
|
938
|
+
0000943 attB_site
|
|
939
|
+
0000944 attL_site
|
|
940
|
+
0000945 attR_site
|
|
941
|
+
0000946 integration_excision_site
|
|
942
|
+
0000947 resolution_site
|
|
943
|
+
0000948 inversion_site
|
|
944
|
+
0000949 dif_site
|
|
945
|
+
0000950 attC_site
|
|
946
|
+
0000951 eukaryotic_terminator
|
|
947
|
+
0000952 oriV
|
|
948
|
+
0000953 oriC
|
|
949
|
+
0000954 DNA_chromosome
|
|
950
|
+
0000955 double_stranded_DNA_chromosome
|
|
951
|
+
0000956 single_stranded_DNA_chromosome
|
|
952
|
+
0000957 linear_double_stranded_DNA_chromosome
|
|
953
|
+
0000958 circular_double_stranded_DNA_chromosome
|
|
954
|
+
0000959 linear_single_stranded_DNA_chromosome
|
|
955
|
+
0000960 circular_single_stranded_DNA_chromosome
|
|
956
|
+
0000961 RNA_chromosome
|
|
957
|
+
0000962 single_stranded_RNA_chromosome
|
|
958
|
+
0000963 linear_single_stranded_RNA_chromosome
|
|
959
|
+
0000964 linear_double_stranded_RNA_chromosome
|
|
960
|
+
0000965 double_stranded_RNA_chromosome
|
|
961
|
+
0000966 circular_single_stranded_RNA_chromosome
|
|
962
|
+
0000967 circular_double_stranded_RNA_chromosome
|
|
963
|
+
0000968 sequence_replication_mode
|
|
964
|
+
0000969 rolling_circle
|
|
965
|
+
0000970 theta_replication
|
|
966
|
+
0000971 DNA_replication_mode
|
|
967
|
+
0000972 RNA_replication_mode
|
|
968
|
+
0000973 insertion_sequence
|
|
969
|
+
0000975 minicircle_gene
|
|
970
|
+
0000976 cryptic
|
|
971
|
+
0000977 anchor_binding_site
|
|
972
|
+
0000978 template_region
|
|
973
|
+
0000979 gRNA_encoding
|
|
974
|
+
0000980 minicircle
|
|
975
|
+
0000981 rho_dependent_bacterial_terminator
|
|
976
|
+
0000982 rho_independent_bacterial_terminator
|
|
977
|
+
0000983 strand_attribute
|
|
978
|
+
0000984 single
|
|
979
|
+
0000985 double
|
|
980
|
+
0000986 topology_attribute
|
|
981
|
+
0000987 linear
|
|
982
|
+
0000988 circular
|
|
983
|
+
0000989 class_II_RNA
|
|
984
|
+
0000990 class_I_RNA
|
|
985
|
+
0000991 genomic_DNA
|
|
986
|
+
0000992 BAC_cloned_genomic_insert
|
|
987
|
+
0000993 consensus
|
|
988
|
+
0000994 consensus_region
|
|
989
|
+
0000995 consensus_mRNA
|
|
990
|
+
0000996 predicted_gene
|
|
991
|
+
0000997 gene_fragment
|
|
992
|
+
0000998 recursive_splice_site
|
|
993
|
+
0000999 BAC_end
|
|
994
|
+
0001000 cytosolic_16S_rRNA
|
|
995
|
+
0001001 cytosolic_23S_rRNA
|
|
996
|
+
0001002 cytosolic_25S_rRNA
|
|
997
|
+
0001003 solo_LTR
|
|
998
|
+
0001004 low_complexity
|
|
999
|
+
0001005 low_complexity_region
|
|
1000
|
+
0001006 prophage
|
|
1001
|
+
0001007 cryptic_prophage
|
|
1002
|
+
0001008 tetraloop
|
|
1003
|
+
0001009 DNA_constraint_sequence
|
|
1004
|
+
0001010 i_motif
|
|
1005
|
+
0001011 PNA_oligo
|
|
1006
|
+
0001012 DNAzyme
|
|
1007
|
+
0001013 MNP
|
|
1008
|
+
0001014 intron_domain
|
|
1009
|
+
0001015 wobble_base_pair
|
|
1010
|
+
0001016 internal_guide_sequence
|
|
1011
|
+
0001017 silent_mutation
|
|
1012
|
+
0001018 epitope
|
|
1013
|
+
0001019 copy_number_variation
|
|
1014
|
+
0001020 sequence_variant_affecting_copy_number
|
|
1015
|
+
0001021 chromosome_breakpoint
|
|
1016
|
+
0001022 inversion_breakpoint
|
|
1017
|
+
0001023 allele
|
|
1018
|
+
0001024 haplotype
|
|
1019
|
+
0001025 polymorphic_sequence_variant
|
|
1020
|
+
0001026 genome
|
|
1021
|
+
0001027 genotype
|
|
1022
|
+
0001028 diplotype
|
|
1023
|
+
0001029 direction_attribute
|
|
1024
|
+
0001030 forward
|
|
1025
|
+
0001031 reverse
|
|
1026
|
+
0001032 mitochondrial_DNA
|
|
1027
|
+
0001033 chloroplast_DNA
|
|
1028
|
+
0001034 miRtron
|
|
1029
|
+
0001035 piRNA
|
|
1030
|
+
0001036 arginyl_tRNA
|
|
1031
|
+
0001037 mobile_genetic_element
|
|
1032
|
+
0001038 extrachromosomal_mobile_genetic_element
|
|
1033
|
+
0001039 integrated_mobile_genetic_element
|
|
1034
|
+
0001040 integrated_plasmid
|
|
1035
|
+
0001041 viral_sequence
|
|
1036
|
+
0001042 phage_sequence
|
|
1037
|
+
0001043 attCtn_site
|
|
1038
|
+
0001044 nuclear_mt_pseudogene
|
|
1039
|
+
0001045 cointegrated_plasmid
|
|
1040
|
+
0001046 IRLinv_site
|
|
1041
|
+
0001047 IRRinv_site
|
|
1042
|
+
0001048 inversion_site_part
|
|
1043
|
+
0001049 defective_conjugative_transposon
|
|
1044
|
+
0001050 repeat_fragment
|
|
1045
|
+
0001051 nested_region
|
|
1046
|
+
0001052 nested_repeat
|
|
1047
|
+
0001053 nested_transposon
|
|
1048
|
+
0001054 transposon_fragment
|
|
1049
|
+
0001055 transcriptional_cis_regulatory_region
|
|
1050
|
+
0001056 splicing_regulatory_region
|
|
1051
|
+
0001057 enhanceosome
|
|
1052
|
+
0001058 promoter_targeting_sequence
|
|
1053
|
+
0001059 sequence_alteration
|
|
1054
|
+
0001060 sequence_variant
|
|
1055
|
+
0001061 propeptide_cleavage_site
|
|
1056
|
+
0001062 propeptide
|
|
1057
|
+
0001063 immature_peptide_region
|
|
1058
|
+
0001064 active_peptide
|
|
1059
|
+
0001066 compositionally_biased_region_of_peptide
|
|
1060
|
+
0001067 polypeptide_motif
|
|
1061
|
+
0001068 polypeptide_repeat
|
|
1062
|
+
0001070 polypeptide_structural_region
|
|
1063
|
+
0001071 membrane_structure
|
|
1064
|
+
0001072 extramembrane_polypeptide_region
|
|
1065
|
+
0001073 cytoplasmic_polypeptide_region
|
|
1066
|
+
0001074 non_cytoplasmic_polypeptide_region
|
|
1067
|
+
0001075 intramembrane_polypeptide_region
|
|
1068
|
+
0001076 membrane_peptide_loop
|
|
1069
|
+
0001077 transmembrane_polypeptide_region
|
|
1070
|
+
0001078 polypeptide_secondary_structure
|
|
1071
|
+
0001079 polypeptide_structural_motif
|
|
1072
|
+
0001080 coiled_coil
|
|
1073
|
+
0001081 helix_turn_helix
|
|
1074
|
+
0001082 polypeptide_sequencing_information
|
|
1075
|
+
0001083 non_adjacent_residues
|
|
1076
|
+
0001084 non_terminal_residue
|
|
1077
|
+
0001085 sequence_conflict
|
|
1078
|
+
0001086 sequence_uncertainty
|
|
1079
|
+
0001087 cross_link
|
|
1080
|
+
0001088 disulfide_bond
|
|
1081
|
+
0001089 post_translationally_modified_region
|
|
1082
|
+
0001090 covalent_binding_site
|
|
1083
|
+
0001091 non_covalent_binding_site
|
|
1084
|
+
0001092 polypeptide_metal_contact
|
|
1085
|
+
0001093 protein_protein_contact
|
|
1086
|
+
0001094 polypeptide_calcium_ion_contact_site
|
|
1087
|
+
0001095 polypeptide_cobalt_ion_contact_site
|
|
1088
|
+
0001096 polypeptide_copper_ion_contact_site
|
|
1089
|
+
0001097 polypeptide_iron_ion_contact_site
|
|
1090
|
+
0001098 polypeptide_magnesium_ion_contact_site
|
|
1091
|
+
0001099 polypeptide_manganese_ion_contact_site
|
|
1092
|
+
0001100 polypeptide_molybdenum_ion_contact_site
|
|
1093
|
+
0001101 polypeptide_nickel_ion_contact_site
|
|
1094
|
+
0001102 polypeptide_tungsten_ion_contact_site
|
|
1095
|
+
0001103 polypeptide_zinc_ion_contact_site
|
|
1096
|
+
0001104 catalytic_residue
|
|
1097
|
+
0001105 polypeptide_ligand_contact
|
|
1098
|
+
0001106 asx_motif
|
|
1099
|
+
0001107 beta_bulge
|
|
1100
|
+
0001108 beta_bulge_loop
|
|
1101
|
+
0001109 beta_bulge_loop_five
|
|
1102
|
+
0001110 beta_bulge_loop_six
|
|
1103
|
+
0001111 beta_strand
|
|
1104
|
+
0001112 antiparallel_beta_strand
|
|
1105
|
+
0001113 parallel_beta_strand
|
|
1106
|
+
0001114 peptide_helix
|
|
1107
|
+
0001115 left_handed_peptide_helix
|
|
1108
|
+
0001116 right_handed_peptide_helix
|
|
1109
|
+
0001117 alpha_helix
|
|
1110
|
+
0001118 pi_helix
|
|
1111
|
+
0001119 three_ten_helix
|
|
1112
|
+
0001120 polypeptide_nest_motif
|
|
1113
|
+
0001121 polypeptide_nest_left_right_motif
|
|
1114
|
+
0001122 polypeptide_nest_right_left_motif
|
|
1115
|
+
0001123 schellmann_loop
|
|
1116
|
+
0001124 schellmann_loop_seven
|
|
1117
|
+
0001125 schellmann_loop_six
|
|
1118
|
+
0001126 serine_threonine_motif
|
|
1119
|
+
0001127 serine_threonine_staple_motif
|
|
1120
|
+
0001128 polypeptide_turn_motif
|
|
1121
|
+
0001129 asx_turn_left_handed_type_one
|
|
1122
|
+
0001130 asx_turn_left_handed_type_two
|
|
1123
|
+
0001131 asx_turn_right_handed_type_two
|
|
1124
|
+
0001132 asx_turn_right_handed_type_one
|
|
1125
|
+
0001133 beta_turn
|
|
1126
|
+
0001134 beta_turn_left_handed_type_one
|
|
1127
|
+
0001135 beta_turn_left_handed_type_two
|
|
1128
|
+
0001136 beta_turn_right_handed_type_one
|
|
1129
|
+
0001137 beta_turn_right_handed_type_two
|
|
1130
|
+
0001138 gamma_turn
|
|
1131
|
+
0001139 gamma_turn_classic
|
|
1132
|
+
0001140 gamma_turn_inverse
|
|
1133
|
+
0001141 serine_threonine_turn
|
|
1134
|
+
0001142 st_turn_left_handed_type_one
|
|
1135
|
+
0001143 st_turn_left_handed_type_two
|
|
1136
|
+
0001144 st_turn_right_handed_type_one
|
|
1137
|
+
0001145 st_turn_right_handed_type_two
|
|
1138
|
+
0001146 polypeptide_variation_site
|
|
1139
|
+
0001147 natural_variant_site
|
|
1140
|
+
0001148 mutated_variant_site
|
|
1141
|
+
0001149 alternate_sequence_site
|
|
1142
|
+
0001150 beta_turn_type_six
|
|
1143
|
+
0001151 beta_turn_type_six_a
|
|
1144
|
+
0001152 beta_turn_type_six_a_one
|
|
1145
|
+
0001153 beta_turn_type_six_a_two
|
|
1146
|
+
0001154 beta_turn_type_six_b
|
|
1147
|
+
0001155 beta_turn_type_eight
|
|
1148
|
+
0001156 DRE_motif
|
|
1149
|
+
0001157 DMv4_motif
|
|
1150
|
+
0001158 E_box_motif
|
|
1151
|
+
0001159 DMv5_motif
|
|
1152
|
+
0001160 DMv3_motif
|
|
1153
|
+
0001161 DMv2_motif
|
|
1154
|
+
0001162 MTE
|
|
1155
|
+
0001163 INR1_motif
|
|
1156
|
+
0001164 DPE1_motif
|
|
1157
|
+
0001165 DMv1_motif
|
|
1158
|
+
0001166 GAGA_motif
|
|
1159
|
+
0001167 NDM2_motif
|
|
1160
|
+
0001168 NDM3_motif
|
|
1161
|
+
0001169 ds_RNA_viral_sequence
|
|
1162
|
+
0001170 polinton
|
|
1163
|
+
0001171 rRNA_21S
|
|
1164
|
+
0001172 tRNA_region
|
|
1165
|
+
0001173 anticodon_loop
|
|
1166
|
+
0001174 anticodon
|
|
1167
|
+
0001175 CCA_tail
|
|
1168
|
+
0001176 DHU_loop
|
|
1169
|
+
0001177 T_loop
|
|
1170
|
+
0001178 pyrrolysine_tRNA_primary_transcript
|
|
1171
|
+
0001179 U3_snoRNA
|
|
1172
|
+
0001180 AU_rich_element
|
|
1173
|
+
0001181 Bruno_response_element
|
|
1174
|
+
0001182 iron_responsive_element
|
|
1175
|
+
0001183 morpholino_backbone
|
|
1176
|
+
0001184 PNA
|
|
1177
|
+
0001185 enzymatic
|
|
1178
|
+
0001186 ribozymic
|
|
1179
|
+
0001187 pseudouridylation_guide_snoRNA
|
|
1180
|
+
0001188 LNA
|
|
1181
|
+
0001189 LNA_oligo
|
|
1182
|
+
0001190 TNA
|
|
1183
|
+
0001191 TNA_oligo
|
|
1184
|
+
0001192 GNA
|
|
1185
|
+
0001193 GNA_oligo
|
|
1186
|
+
0001194 R_GNA
|
|
1187
|
+
0001195 R_GNA_oligo
|
|
1188
|
+
0001196 S_GNA
|
|
1189
|
+
0001197 S_GNA_oligo
|
|
1190
|
+
0001198 ds_DNA_viral_sequence
|
|
1191
|
+
0001199 ss_RNA_viral_sequence
|
|
1192
|
+
0001200 negative_sense_ssRNA_viral_sequence
|
|
1193
|
+
0001201 positive_sense_ssRNA_viral_sequence
|
|
1194
|
+
0001202 ambisense_ssRNA_viral_sequence
|
|
1195
|
+
0001203 RNA_polymerase_promoter
|
|
1196
|
+
0001204 Phage_RNA_Polymerase_Promoter
|
|
1197
|
+
0001205 SP6_RNA_Polymerase_Promoter
|
|
1198
|
+
0001206 T3_RNA_Polymerase_Promoter
|
|
1199
|
+
0001207 T7_RNA_Polymerase_Promoter
|
|
1200
|
+
0001208 five_prime_EST
|
|
1201
|
+
0001209 three_prime_EST
|
|
1202
|
+
0001210 translational_frameshift
|
|
1203
|
+
0001211 plus_1_translational_frameshift
|
|
1204
|
+
0001212 plus_2_translational_frameshift
|
|
1205
|
+
0001213 group_III_intron
|
|
1206
|
+
0001214 noncoding_region_of_exon
|
|
1207
|
+
0001215 coding_region_of_exon
|
|
1208
|
+
0001216 endonuclease_spliced_intron
|
|
1209
|
+
0001217 protein_coding_gene
|
|
1210
|
+
0001218 transgenic_insertion
|
|
1211
|
+
0001219 retrogene
|
|
1212
|
+
0001220 silenced_by_RNA_interference
|
|
1213
|
+
0001221 silenced_by_histone_modification
|
|
1214
|
+
0001222 silenced_by_histone_methylation
|
|
1215
|
+
0001223 silenced_by_histone_deacetylation
|
|
1216
|
+
0001224 gene_silenced_by_RNA_interference
|
|
1217
|
+
0001225 gene_silenced_by_histone_modification
|
|
1218
|
+
0001226 gene_silenced_by_histone_methylation
|
|
1219
|
+
0001227 gene_silenced_by_histone_deacetylation
|
|
1220
|
+
0001228 dihydrouridine
|
|
1221
|
+
0001229 pseudouridine
|
|
1222
|
+
0001230 inosine
|
|
1223
|
+
0001231 seven_methylguanine
|
|
1224
|
+
0001232 ribothymidine
|
|
1225
|
+
0001233 methylinosine
|
|
1226
|
+
0001234 mobile
|
|
1227
|
+
0001235 replicon
|
|
1228
|
+
0001236 base
|
|
1229
|
+
0001237 amino_acid
|
|
1230
|
+
0001238 major_TSS
|
|
1231
|
+
0001239 minor_TSS
|
|
1232
|
+
0001240 TSS_region
|
|
1233
|
+
0001241 encodes_alternate_transcription_start_sites
|
|
1234
|
+
0001243 miRNA_primary_transcript_region
|
|
1235
|
+
0001244 pre_miRNA
|
|
1236
|
+
0001245 miRNA_stem
|
|
1237
|
+
0001246 miRNA_loop
|
|
1238
|
+
0001247 synthetic_oligo
|
|
1239
|
+
0001248 assembly
|
|
1240
|
+
0001249 fragment_assembly
|
|
1241
|
+
0001250 fingerprint_map
|
|
1242
|
+
0001251 STS_map
|
|
1243
|
+
0001252 RH_map
|
|
1244
|
+
0001253 sonicate_fragment
|
|
1245
|
+
0001254 polyploid
|
|
1246
|
+
0001255 autopolyploid
|
|
1247
|
+
0001256 allopolyploid
|
|
1248
|
+
0001257 homing_endonuclease_binding_site
|
|
1249
|
+
0001258 octamer_motif
|
|
1250
|
+
0001259 apicoplast_chromosome
|
|
1251
|
+
0001260 sequence_collection
|
|
1252
|
+
0001261 overlapping_feature_set
|
|
1253
|
+
0001262 overlapping_EST_set
|
|
1254
|
+
0001263 ncRNA_gene
|
|
1255
|
+
0001264 gRNA_gene
|
|
1256
|
+
0001265 miRNA_gene
|
|
1257
|
+
0001266 scRNA_gene
|
|
1258
|
+
0001267 snoRNA_gene
|
|
1259
|
+
0001268 snRNA_gene
|
|
1260
|
+
0001269 SRP_RNA_gene
|
|
1261
|
+
0001271 tmRNA_gene
|
|
1262
|
+
0001272 tRNA_gene
|
|
1263
|
+
0001273 modified_adenosine
|
|
1264
|
+
0001274 modified_inosine
|
|
1265
|
+
0001275 modified_cytidine
|
|
1266
|
+
0001276 modified_guanosine
|
|
1267
|
+
0001277 modified_uridine
|
|
1268
|
+
0001278 one_methylinosine
|
|
1269
|
+
0001279 one_two_prime_O_dimethylinosine
|
|
1270
|
+
0001280 two_prime_O_methylinosine
|
|
1271
|
+
0001281 three_methylcytidine
|
|
1272
|
+
0001282 five_methylcytidine
|
|
1273
|
+
0001283 two_prime_O_methylcytidine
|
|
1274
|
+
0001284 two_thiocytidine
|
|
1275
|
+
0001285 N4_acetylcytidine
|
|
1276
|
+
0001286 five_formylcytidine
|
|
1277
|
+
0001287 five_two_prime_O_dimethylcytidine
|
|
1278
|
+
0001288 N4_acetyl_2_prime_O_methylcytidine
|
|
1279
|
+
0001289 lysidine
|
|
1280
|
+
0001290 N4_methylcytidine
|
|
1281
|
+
0001291 N4_2_prime_O_dimethylcytidine
|
|
1282
|
+
0001292 five_hydroxymethylcytidine
|
|
1283
|
+
0001293 five_formyl_two_prime_O_methylcytidine
|
|
1284
|
+
0001294 N4_N4_2_prime_O_trimethylcytidine
|
|
1285
|
+
0001295 one_methyladenosine
|
|
1286
|
+
0001296 two_methyladenosine
|
|
1287
|
+
0001297 N6_methyladenosine
|
|
1288
|
+
0001298 two_prime_O_methyladenosine
|
|
1289
|
+
0001299 two_methylthio_N6_methyladenosine
|
|
1290
|
+
0001300 N6_isopentenyladenosine
|
|
1291
|
+
0001301 two_methylthio_N6_isopentenyladenosine
|
|
1292
|
+
0001302 N6_cis_hydroxyisopentenyl_adenosine
|
|
1293
|
+
0001303 two_methylthio_N6_cis_hydroxyisopentenyl_adenosine
|
|
1294
|
+
0001304 N6_glycinylcarbamoyladenosine
|
|
1295
|
+
0001305 N6_threonylcarbamoyladenosine
|
|
1296
|
+
0001306 two_methylthio_N6_threonyl_carbamoyladenosine
|
|
1297
|
+
0001307 N6_methyl_N6_threonylcarbamoyladenosine
|
|
1298
|
+
0001308 N6_hydroxynorvalylcarbamoyladenosine
|
|
1299
|
+
0001309 two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine
|
|
1300
|
+
0001310 two_prime_O_ribosyladenosine_phosphate
|
|
1301
|
+
0001311 N6_N6_dimethyladenosine
|
|
1302
|
+
0001312 N6_2_prime_O_dimethyladenosine
|
|
1303
|
+
0001313 N6_N6_2_prime_O_trimethyladenosine
|
|
1304
|
+
0001314 one_two_prime_O_dimethyladenosine
|
|
1305
|
+
0001315 N6_acetyladenosine
|
|
1306
|
+
0001316 seven_deazaguanosine
|
|
1307
|
+
0001317 queuosine
|
|
1308
|
+
0001318 epoxyqueuosine
|
|
1309
|
+
0001319 galactosyl_queuosine
|
|
1310
|
+
0001320 mannosyl_queuosine
|
|
1311
|
+
0001321 seven_cyano_seven_deazaguanosine
|
|
1312
|
+
0001322 seven_aminomethyl_seven_deazaguanosine
|
|
1313
|
+
0001323 archaeosine
|
|
1314
|
+
0001324 one_methylguanosine
|
|
1315
|
+
0001325 N2_methylguanosine
|
|
1316
|
+
0001326 seven_methylguanosine
|
|
1317
|
+
0001327 two_prime_O_methylguanosine
|
|
1318
|
+
0001328 N2_N2_dimethylguanosine
|
|
1319
|
+
0001329 N2_2_prime_O_dimethylguanosine
|
|
1320
|
+
0001330 N2_N2_2_prime_O_trimethylguanosine
|
|
1321
|
+
0001331 two_prime_O_ribosylguanosine_phosphate
|
|
1322
|
+
0001332 wybutosine
|
|
1323
|
+
0001333 peroxywybutosine
|
|
1324
|
+
0001334 hydroxywybutosine
|
|
1325
|
+
0001335 undermodified_hydroxywybutosine
|
|
1326
|
+
0001336 wyosine
|
|
1327
|
+
0001337 methylwyosine
|
|
1328
|
+
0001338 N2_7_dimethylguanosine
|
|
1329
|
+
0001339 N2_N2_7_trimethylguanosine
|
|
1330
|
+
0001340 one_two_prime_O_dimethylguanosine
|
|
1331
|
+
0001341 four_demethylwyosine
|
|
1332
|
+
0001342 isowyosine
|
|
1333
|
+
0001343 N2_7_2prirme_O_trimethylguanosine
|
|
1334
|
+
0001344 five_methyluridine
|
|
1335
|
+
0001345 two_prime_O_methyluridine
|
|
1336
|
+
0001346 five_two_prime_O_dimethyluridine
|
|
1337
|
+
0001347 one_methylpseudouridine
|
|
1338
|
+
0001348 two_prime_O_methylpseudouridine
|
|
1339
|
+
0001349 two_thiouridine
|
|
1340
|
+
0001350 four_thiouridine
|
|
1341
|
+
0001351 five_methyl_2_thiouridine
|
|
1342
|
+
0001352 two_thio_two_prime_O_methyluridine
|
|
1343
|
+
0001353 three_three_amino_three_carboxypropyl_uridine
|
|
1344
|
+
0001354 five_hydroxyuridine
|
|
1345
|
+
0001355 five_methoxyuridine
|
|
1346
|
+
0001356 uridine_five_oxyacetic_acid
|
|
1347
|
+
0001357 uridine_five_oxyacetic_acid_methyl_ester
|
|
1348
|
+
0001358 five_carboxyhydroxymethyl_uridine
|
|
1349
|
+
0001359 five_carboxyhydroxymethyl_uridine_methyl_ester
|
|
1350
|
+
0001360 five_methoxycarbonylmethyluridine
|
|
1351
|
+
0001361 five_methoxycarbonylmethyl_two_prime_O_methyluridine
|
|
1352
|
+
0001362 five_methoxycarbonylmethyl_two_thiouridine
|
|
1353
|
+
0001363 five_aminomethyl_two_thiouridine
|
|
1354
|
+
0001364 five_methylaminomethyluridine
|
|
1355
|
+
0001365 five_methylaminomethyl_two_thiouridine
|
|
1356
|
+
0001366 five_methylaminomethyl_two_selenouridine
|
|
1357
|
+
0001367 five_carbamoylmethyluridine
|
|
1358
|
+
0001368 five_carbamoylmethyl_two_prime_O_methyluridine
|
|
1359
|
+
0001369 five_carboxymethylaminomethyluridine
|
|
1360
|
+
0001370 five_carboxymethylaminomethyl_two_prime_O_methyluridine
|
|
1361
|
+
0001371 five_carboxymethylaminomethyl_two_thiouridine
|
|
1362
|
+
0001372 three_methyluridine
|
|
1363
|
+
0001373 one_methyl_three_three_amino_three_carboxypropyl_pseudouridine
|
|
1364
|
+
0001374 five_carboxymethyluridine
|
|
1365
|
+
0001375 three_two_prime_O_dimethyluridine
|
|
1366
|
+
0001376 five_methyldihydrouridine
|
|
1367
|
+
0001377 three_methylpseudouridine
|
|
1368
|
+
0001378 five_taurinomethyluridine
|
|
1369
|
+
0001379 five_taurinomethyl_two_thiouridine
|
|
1370
|
+
0001380 five_isopentenylaminomethyl_uridine
|
|
1371
|
+
0001381 five_isopentenylaminomethyl_two_thiouridine
|
|
1372
|
+
0001382 five_isopentenylaminomethyl_two_prime_O_methyluridine
|
|
1373
|
+
0001383 histone_binding_site
|
|
1374
|
+
0001384 CDS_fragment
|
|
1375
|
+
0001385 modified_amino_acid_feature
|
|
1376
|
+
0001386 modified_glycine
|
|
1377
|
+
0001387 modified_L_alanine
|
|
1378
|
+
0001388 modified_L_asparagine
|
|
1379
|
+
0001389 modified_L_aspartic_acid
|
|
1380
|
+
0001390 modified_L_cysteine
|
|
1381
|
+
0001391 modified_L_glutamic_acid
|
|
1382
|
+
0001392 modified_L_threonine
|
|
1383
|
+
0001393 modified_L_tryptophan
|
|
1384
|
+
0001394 modified_L_glutamine
|
|
1385
|
+
0001395 modified_L_methionine
|
|
1386
|
+
0001396 modified_L_isoleucine
|
|
1387
|
+
0001397 modified_L_phenylalanine
|
|
1388
|
+
0001398 modified_L_histidine
|
|
1389
|
+
0001399 modified_L_serine
|
|
1390
|
+
0001400 modified_L_lysine
|
|
1391
|
+
0001401 modified_L_leucine
|
|
1392
|
+
0001402 modified_L_selenocysteine
|
|
1393
|
+
0001403 modified_L_valine
|
|
1394
|
+
0001404 modified_L_proline
|
|
1395
|
+
0001405 modified_L_tyrosine
|
|
1396
|
+
0001406 modified_L_arginine
|
|
1397
|
+
0001407 peptidyl
|
|
1398
|
+
0001408 cleaved_for_gpi_anchor_region
|
|
1399
|
+
0001409 biomaterial_region
|
|
1400
|
+
0001410 experimental_feature
|
|
1401
|
+
0001411 biological_region
|
|
1402
|
+
0001412 topologically_defined_region
|
|
1403
|
+
0001413 translocation_breakpoint
|
|
1404
|
+
0001414 insertion_breakpoint
|
|
1405
|
+
0001415 deletion_breakpoint
|
|
1406
|
+
0001416 five_prime_flanking_region
|
|
1407
|
+
0001417 three_prime_flanking_region
|
|
1408
|
+
0001418 transcribed_fragment
|
|
1409
|
+
0001419 cis_splice_site
|
|
1410
|
+
0001420 trans_splice_site
|
|
1411
|
+
0001421 splice_junction
|
|
1412
|
+
0001422 conformational_switch
|
|
1413
|
+
0001423 dye_terminator_read
|
|
1414
|
+
0001424 pyrosequenced_read
|
|
1415
|
+
0001425 ligation_based_read
|
|
1416
|
+
0001426 polymerase_synthesis_read
|
|
1417
|
+
0001427 cis_regulatory_frameshift_element
|
|
1418
|
+
0001428 expressed_sequence_assembly
|
|
1419
|
+
0001429 DNA_binding_site
|
|
1420
|
+
0001431 cryptic_gene
|
|
1421
|
+
0001432 sequence_variant_affecting_polyadenylation
|
|
1422
|
+
0001433 three_prime_RACE_clone
|
|
1423
|
+
0001434 cassette_pseudogene
|
|
1424
|
+
0001435 alanine
|
|
1425
|
+
0001436 valine
|
|
1426
|
+
0001437 leucine
|
|
1427
|
+
0001438 isoleucine
|
|
1428
|
+
0001439 proline
|
|
1429
|
+
0001440 tryptophan
|
|
1430
|
+
0001441 phenylalanine
|
|
1431
|
+
0001442 methionine
|
|
1432
|
+
0001443 glycine
|
|
1433
|
+
0001444 serine
|
|
1434
|
+
0001445 threonine
|
|
1435
|
+
0001446 tyrosine
|
|
1436
|
+
0001447 cysteine
|
|
1437
|
+
0001448 glutamine
|
|
1438
|
+
0001449 asparagine
|
|
1439
|
+
0001450 lysine
|
|
1440
|
+
0001451 arginine
|
|
1441
|
+
0001452 histidine
|
|
1442
|
+
0001453 aspartic_acid
|
|
1443
|
+
0001454 glutamic_acid
|
|
1444
|
+
0001455 selenocysteine
|
|
1445
|
+
0001456 pyrrolysine
|
|
1446
|
+
0001457 transcribed_cluster
|
|
1447
|
+
0001458 unigene_cluster
|
|
1448
|
+
0001459 CRISPR
|
|
1449
|
+
0001460 insulator_binding_site
|
|
1450
|
+
0001461 enhancer_binding_site
|
|
1451
|
+
0001462 contig_collection
|
|
1452
|
+
0001463 lincRNA
|
|
1453
|
+
0001464 UST
|
|
1454
|
+
0001465 three_prime_UST
|
|
1455
|
+
0001466 five_prime_UST
|
|
1456
|
+
0001467 RST
|
|
1457
|
+
0001468 three_prime_RST
|
|
1458
|
+
0001469 five_prime_RST
|
|
1459
|
+
0001470 UST_match
|
|
1460
|
+
0001471 RST_match
|
|
1461
|
+
0001472 primer_match
|
|
1462
|
+
0001473 miRNA_antiguide
|
|
1463
|
+
0001474 trans_splice_junction
|
|
1464
|
+
0001475 outron
|
|
1465
|
+
0001476 natural_plasmid
|
|
1466
|
+
0001477 gene_trap_construct
|
|
1467
|
+
0001478 promoter_trap_construct
|
|
1468
|
+
0001479 enhancer_trap_construct
|
|
1469
|
+
0001480 PAC_end
|
|
1470
|
+
0001481 RAPD
|
|
1471
|
+
0001482 shadow_enhancer
|
|
1472
|
+
0001483 SNV
|
|
1473
|
+
0001484 X_element_combinatorial_repeat
|
|
1474
|
+
0001485 Y_prime_element
|
|
1475
|
+
0001486 standard_draft
|
|
1476
|
+
0001487 high_quality_draft
|
|
1477
|
+
0001488 improved_high_quality_draft
|
|
1478
|
+
0001489 annotation_directed_improved_draft
|
|
1479
|
+
0001490 noncontiguous_finished
|
|
1480
|
+
0001491 finished_genome
|
|
1481
|
+
0001492 intronic_regulatory_region
|
|
1482
|
+
0001493 centromere_DNA_Element_I
|
|
1483
|
+
0001494 centromere_DNA_Element_II
|
|
1484
|
+
0001495 centromere_DNA_Element_III
|
|
1485
|
+
0001496 telomeric_repeat
|
|
1486
|
+
0001497 X_element
|
|
1487
|
+
0001498 YAC_end
|
|
1488
|
+
0001499 whole_genome_sequence_status
|
|
1489
|
+
0001500 heritable_phenotypic_marker
|
|
1490
|
+
0001501 peptide_collection
|
|
1491
|
+
0001502 high_identity_region
|
|
1492
|
+
0001503 processed_transcript
|
|
1493
|
+
0001504 assortment_derived_variation
|
|
1494
|
+
0001505 reference_genome
|
|
1495
|
+
0001506 variant_genome
|
|
1496
|
+
0001507 variant_collection
|
|
1497
|
+
0001508 alteration_attribute
|
|
1498
|
+
0001509 chromosomal_variation_attribute
|
|
1499
|
+
0001510 intrachromosomal
|
|
1500
|
+
0001511 interchromosomal
|
|
1501
|
+
0001512 insertion_attribute
|
|
1502
|
+
0001513 tandem
|
|
1503
|
+
0001514 direct
|
|
1504
|
+
0001515 inverted
|
|
1505
|
+
0001516 free
|
|
1506
|
+
0001517 inversion_attribute
|
|
1507
|
+
0001518 pericentric
|
|
1508
|
+
0001519 paracentric
|
|
1509
|
+
0001520 translocaton_attribute
|
|
1510
|
+
0001521 reciprocal
|
|
1511
|
+
0001522 insertional
|
|
1512
|
+
0001523 duplication_attribute
|
|
1513
|
+
0001524 chromosomally_aberrant_genome
|
|
1514
|
+
0001525 assembly_error_correction
|
|
1515
|
+
0001526 base_call_error_correction
|
|
1516
|
+
0001527 peptide_localization_signal
|
|
1517
|
+
0001528 nuclear_localization_signal
|
|
1518
|
+
0001529 endosomal_localization_signal
|
|
1519
|
+
0001530 lysosomal_localization_signal
|
|
1520
|
+
0001531 nuclear_export_signal
|
|
1521
|
+
0001532 recombination_signal_sequence
|
|
1522
|
+
0001533 cryptic_splice_site
|
|
1523
|
+
0001534 nuclear_rim_localization_signal
|
|
1524
|
+
0001535 P_TIR_transposon
|
|
1525
|
+
0001536 functional_effect_variant
|
|
1526
|
+
0001537 structural_variant
|
|
1527
|
+
0001538 transcript_function_variant
|
|
1528
|
+
0001539 translational_product_function_variant
|
|
1529
|
+
0001540 level_of_transcript_variant
|
|
1530
|
+
0001541 decreased_transcript_level_variant
|
|
1531
|
+
0001542 increased_transcript_level_variant
|
|
1532
|
+
0001543 transcript_processing_variant
|
|
1533
|
+
0001544 editing_variant
|
|
1534
|
+
0001545 polyadenylation_variant
|
|
1535
|
+
0001546 transcript_stability_variant
|
|
1536
|
+
0001547 decreased_transcript_stability_variant
|
|
1537
|
+
0001548 increased_transcript_stability_variant
|
|
1538
|
+
0001549 transcription_variant
|
|
1539
|
+
0001550 rate_of_transcription_variant
|
|
1540
|
+
0001551 increased_transcription_rate_variant
|
|
1541
|
+
0001552 decreased_transcription_rate_variant
|
|
1542
|
+
0001553 translational_product_level_variant
|
|
1543
|
+
0001554 polypeptide_function_variant
|
|
1544
|
+
0001555 decreased_translational_product_level
|
|
1545
|
+
0001556 increased_translational_product_level
|
|
1546
|
+
0001557 polypeptide_gain_of_function_variant
|
|
1547
|
+
0001558 polypeptide_localization_variant
|
|
1548
|
+
0001559 polypeptide_loss_of_function_variant
|
|
1549
|
+
0001560 inactive_ligand_binding_site
|
|
1550
|
+
0001561 polypeptide_partial_loss_of_function
|
|
1551
|
+
0001562 polypeptide_post_translational_processing_variant
|
|
1552
|
+
0001563 copy_number_change
|
|
1553
|
+
0001564 gene_variant
|
|
1554
|
+
0001565 gene_fusion
|
|
1555
|
+
0001566 regulatory_region_variant
|
|
1556
|
+
0001567 stop_retained_variant
|
|
1557
|
+
0001568 splicing_variant
|
|
1558
|
+
0001569 cryptic_splice_site_variant
|
|
1559
|
+
0001570 cryptic_splice_acceptor
|
|
1560
|
+
0001571 cryptic_splice_donor
|
|
1561
|
+
0001572 exon_loss_variant
|
|
1562
|
+
0001573 intron_gain_variant
|
|
1563
|
+
0001574 splice_acceptor_variant
|
|
1564
|
+
0001575 splice_donor_variant
|
|
1565
|
+
0001576 transcript_variant
|
|
1566
|
+
0001577 complex_transcript_variant
|
|
1567
|
+
0001578 stop_lost
|
|
1568
|
+
0001579 transcript_sequence_variant
|
|
1569
|
+
0001580 coding_sequence_variant
|
|
1570
|
+
0001582 initiator_codon_variant
|
|
1571
|
+
0001583 missense_variant
|
|
1572
|
+
0001585 conservative_missense_variant
|
|
1573
|
+
0001586 non_conservative_missense_variant
|
|
1574
|
+
0001587 stop_gained
|
|
1575
|
+
0001589 frameshift_variant
|
|
1576
|
+
0001590 terminator_codon_variant
|
|
1577
|
+
0001591 frame_restoring_variant
|
|
1578
|
+
0001592 minus_1_frameshift_variant
|
|
1579
|
+
0001593 minus_2_frameshift_variant
|
|
1580
|
+
0001594 plus_1_frameshift_variant
|
|
1581
|
+
0001595 plus_2_frameshift_variant
|
|
1582
|
+
0001596 transcript_secondary_structure_variant
|
|
1583
|
+
0001597 compensatory_transcript_secondary_structure_variant
|
|
1584
|
+
0001598 translational_product_structure_variant
|
|
1585
|
+
0001599 3D_polypeptide_structure_variant
|
|
1586
|
+
0001600 complex_3D_structural_variant
|
|
1587
|
+
0001601 conformational_change_variant
|
|
1588
|
+
0001602 complex_change_of_translational_product_variant
|
|
1589
|
+
0001603 polypeptide_sequence_variant
|
|
1590
|
+
0001604 amino_acid_deletion
|
|
1591
|
+
0001605 amino_acid_insertion
|
|
1592
|
+
0001606 amino_acid_substitution
|
|
1593
|
+
0001607 conservative_amino_acid_substitution
|
|
1594
|
+
0001608 non_conservative_amino_acid_substitution
|
|
1595
|
+
0001609 elongated_polypeptide
|
|
1596
|
+
0001610 elongated_polypeptide_C_terminal
|
|
1597
|
+
0001611 elongated_polypeptide_N_terminal
|
|
1598
|
+
0001612 elongated_in_frame_polypeptide_C_terminal
|
|
1599
|
+
0001613 elongated_out_of_frame_polypeptide_C_terminal
|
|
1600
|
+
0001614 elongated_in_frame_polypeptide_N_terminal_elongation
|
|
1601
|
+
0001615 elongated_out_of_frame_polypeptide_N_terminal
|
|
1602
|
+
0001616 polypeptide_fusion
|
|
1603
|
+
0001617 polypeptide_truncation
|
|
1604
|
+
0001618 inactive_catalytic_site
|
|
1605
|
+
0001619 non_coding_transcript_variant
|
|
1606
|
+
0001620 mature_miRNA_variant
|
|
1607
|
+
0001621 NMD_transcript_variant
|
|
1608
|
+
0001622 UTR_variant
|
|
1609
|
+
0001623 5_prime_UTR_variant
|
|
1610
|
+
0001624 3_prime_UTR_variant
|
|
1611
|
+
0001626 incomplete_terminal_codon_variant
|
|
1612
|
+
0001627 intron_variant
|
|
1613
|
+
0001628 intergenic_variant
|
|
1614
|
+
0001629 splice_site_variant
|
|
1615
|
+
0001630 splice_region_variant
|
|
1616
|
+
0001631 upstream_gene_variant
|
|
1617
|
+
0001632 downstream_gene_variant
|
|
1618
|
+
0001633 5KB_downstream_variant
|
|
1619
|
+
0001634 500B_downstream_variant
|
|
1620
|
+
0001635 5KB_upstream_variant
|
|
1621
|
+
0001636 2KB_upstream_variant
|
|
1622
|
+
0001637 rRNA_gene
|
|
1623
|
+
0001638 piRNA_gene
|
|
1624
|
+
0001639 RNase_P_RNA_gene
|
|
1625
|
+
0001640 RNase_MRP_RNA_gene
|
|
1626
|
+
0001641 lincRNA_gene
|
|
1627
|
+
0001642 mathematically_defined_repeat
|
|
1628
|
+
0001643 telomerase_RNA_gene
|
|
1629
|
+
0001644 targeting_vector
|
|
1630
|
+
0001645 genetic_marker
|
|
1631
|
+
0001646 DArT_marker
|
|
1632
|
+
0001647 kozak_sequence
|
|
1633
|
+
0001648 nested_transposon
|
|
1634
|
+
0001649 nested_repeat
|
|
1635
|
+
0001650 inframe_variant
|
|
1636
|
+
0001653 retinoic_acid_responsive_element
|
|
1637
|
+
0001654 nucleotide_to_protein_binding_site
|
|
1638
|
+
0001655 nucleotide_binding_site
|
|
1639
|
+
0001656 metal_binding_site
|
|
1640
|
+
0001657 ligand_binding_site
|
|
1641
|
+
0001658 nested_tandem_repeat
|
|
1642
|
+
0001659 promoter_element
|
|
1643
|
+
0001660 core_eukaryotic_promoter_element
|
|
1644
|
+
0001661 RNA_polymerase_II_TATA_box
|
|
1645
|
+
0001662 RNA_polymerase_III_TATA_box
|
|
1646
|
+
0001663 BREd_motif
|
|
1647
|
+
0001664 DCE
|
|
1648
|
+
0001665 DCE_SI
|
|
1649
|
+
0001666 DCE_SII
|
|
1650
|
+
0001667 DCE_SIII
|
|
1651
|
+
0001668 proximal_promoter_element
|
|
1652
|
+
0001669 RNApol_II_core_promoter
|
|
1653
|
+
0001670 distal_promoter_element
|
|
1654
|
+
0001671 bacterial_RNApol_promoter_sigma_70_element
|
|
1655
|
+
0001672 bacterial_RNApol_promoter_sigma54_element
|
|
1656
|
+
0001673 minus_12_signal
|
|
1657
|
+
0001674 minus_24_signal
|
|
1658
|
+
0001675 A_box_type_1
|
|
1659
|
+
0001676 A_box_type_2
|
|
1660
|
+
0001677 intermediate_element
|
|
1661
|
+
0001678 regulatory_promoter_element
|
|
1662
|
+
0001679 transcription_regulatory_region
|
|
1663
|
+
0001680 translation_regulatory_region
|
|
1664
|
+
0001681 recombination_regulatory_region
|
|
1665
|
+
0001682 replication_regulatory_region
|
|
1666
|
+
0001683 sequence_motif
|
|
1667
|
+
0001684 experimental_feature_attribute
|
|
1668
|
+
0001685 score
|
|
1669
|
+
0001686 quality_value
|
|
1670
|
+
0001687 restriction_enzyme_recognition_site
|
|
1671
|
+
0001688 restriction_enzyme_cleavage_junction
|
|
1672
|
+
0001689 five_prime_restriction_enzyme_junction
|
|
1673
|
+
0001690 three_prime_restriction_enzyme_junction
|
|
1674
|
+
0001691 blunt_end_restriction_enzyme_cleavage_site
|
|
1675
|
+
0001692 sticky_end_restriction_enzyme_cleavage_site
|
|
1676
|
+
0001693 blunt_end_restriction_enzyme_cleavage_junction
|
|
1677
|
+
0001694 single_strand_restriction_enzyme_cleavage_site
|
|
1678
|
+
0001695 restriction_enzyme_single_strand_overhang
|
|
1679
|
+
0001696 experimentally_defined_binding_region
|
|
1680
|
+
0001697 ChIP_seq_region
|
|
1681
|
+
0001698 ASPE_primer
|
|
1682
|
+
0001699 dCAPS_primer
|
|
1683
|
+
0001700 histone_modification
|
|
1684
|
+
0001701 histone_methylation_site
|
|
1685
|
+
0001702 histone_acetylation_site
|
|
1686
|
+
0001703 H3K9_acetylation_site
|
|
1687
|
+
0001704 H3K14_acetylation_site
|
|
1688
|
+
0001705 H3K4_monomethylation_site
|
|
1689
|
+
0001706 H3K4_trimethylation
|
|
1690
|
+
0001707 H3K9_trimethylation_site
|
|
1691
|
+
0001708 H3K27_monomethylation_site
|
|
1692
|
+
0001709 H3K27_trimethylation_site
|
|
1693
|
+
0001710 H3K79_monomethylation_site
|
|
1694
|
+
0001711 H3K79_dimethylation_site
|
|
1695
|
+
0001712 H3K79_trimethylation_site
|
|
1696
|
+
0001713 H4K20_monomethylation_site
|
|
1697
|
+
0001714 H2BK5_monomethylation_site
|
|
1698
|
+
0001715 ISRE
|
|
1699
|
+
0001716 histone_ubiqitination_site
|
|
1700
|
+
0001717 H2B_ubiquitination_site
|
|
1701
|
+
0001718 H3K18_acetylation_site
|
|
1702
|
+
0001719 H3K23_acetylation_site
|
|
1703
|
+
0001720 epigenetically_modified_region
|
|
1704
|
+
0001721 H3K27_acylation_site
|
|
1705
|
+
0001722 H3K36_monomethylation_site
|
|
1706
|
+
0001723 H3K36_dimethylation_site
|
|
1707
|
+
0001724 H3K36_trimethylation_site
|
|
1708
|
+
0001725 H3K4_dimethylation_site
|
|
1709
|
+
0001726 H3K27_dimethylation_site
|
|
1710
|
+
0001727 H3K9_monomethylation_site
|
|
1711
|
+
0001728 H3K9_dimethylation_site
|
|
1712
|
+
0001729 H4K16_acetylation_site
|
|
1713
|
+
0001730 H4K5_acetylation_site
|
|
1714
|
+
0001731 H4K8_acetylation_site
|
|
1715
|
+
0001732 H3K27_methylation_site
|
|
1716
|
+
0001733 H3K36_methylation_site
|
|
1717
|
+
0001734 H3K4_methylation_site
|
|
1718
|
+
0001735 H3K79_methylation_site
|
|
1719
|
+
0001736 H3K9_methylation_site
|
|
1720
|
+
0001737 histone_acylation_region
|
|
1721
|
+
0001738 H4K_acylation_region
|
|
1722
|
+
0001739 gene_with_non_canonical_start_codon
|
|
1723
|
+
0001740 gene_with_start_codon_CUG
|
|
1724
|
+
0001741 pseudogenic_gene_segment
|
|
1725
|
+
0001742 copy_number_gain
|
|
1726
|
+
0001743 copy_number_loss
|
|
1727
|
+
0001744 UPD
|
|
1728
|
+
0001745 maternal_uniparental_disomy
|
|
1729
|
+
0001746 paternal_uniparental_disomy
|
|
1730
|
+
0001747 open_chromatin_region
|
|
1731
|
+
0001748 SL3_acceptor_site
|
|
1732
|
+
0001749 SL4_acceptor_site
|
|
1733
|
+
0001750 SL5_acceptor_site
|
|
1734
|
+
0001751 SL6_acceptor_site
|
|
1735
|
+
0001752 SL7_acceptor_site
|
|
1736
|
+
0001753 SL8_acceptor_site
|
|
1737
|
+
0001754 SL9_acceptor_site
|
|
1738
|
+
0001755 SL10_acceptor_site
|
|
1739
|
+
0001756 SL11_acceptor_site
|
|
1740
|
+
0001757 SL12_acceptor_site
|
|
1741
|
+
0001758 duplicated_pseudogene
|
|
1742
|
+
0001759 unitary_pseudogene
|
|
1743
|
+
0001760 non_processed_pseudogene
|
|
1744
|
+
0001761 variant_quality
|
|
1745
|
+
0001762 variant_origin
|
|
1746
|
+
0001763 variant_frequency
|
|
1747
|
+
0001764 unique_variant
|
|
1748
|
+
0001765 rare_variant
|
|
1749
|
+
0001766 polymorphic_variant
|
|
1750
|
+
0001767 common_variant
|
|
1751
|
+
0001768 fixed_variant
|
|
1752
|
+
0001769 variant_phenotype
|
|
1753
|
+
0001770 benign_variant
|
|
1754
|
+
0001771 disease_associated_variant
|
|
1755
|
+
0001772 disease_causing_variant
|
|
1756
|
+
0001773 lethal_variant
|
|
1757
|
+
0001774 quantitative_variant
|
|
1758
|
+
0001775 maternal_variant
|
|
1759
|
+
0001776 paternal_variant
|
|
1760
|
+
0001777 somatic_variant
|
|
1761
|
+
0001778 germline_variant
|
|
1762
|
+
0001779 pedigree_specific_variant
|
|
1763
|
+
0001780 population_specific_variant
|
|
1764
|
+
0001781 de_novo_variant
|
|
1765
|
+
0001782 TF_binding_site_variant
|
|
1766
|
+
0001784 complex_structural_alteration
|
|
1767
|
+
0001785 structural_alteration
|
|
1768
|
+
0001786 loss_of_heterozygosity
|
|
1769
|
+
0001787 splice_donor_5th_base_variant
|
|
1770
|
+
0001788 U_box
|
|
1771
|
+
0001789 mating_type_region
|
|
1772
|
+
0001790 paired_end_fragment
|
|
1773
|
+
0001791 exon_variant
|
|
1774
|
+
0001792 non_coding_transcript_exon_variant
|
|
1775
|
+
0001793 clone_end
|
|
1776
|
+
0001794 point_centromere
|
|
1777
|
+
0001795 regional_centromere
|
|
1778
|
+
0001796 regional_centromere_central_core
|
|
1779
|
+
0001797 centromeric_repeat
|
|
1780
|
+
0001798 regional_centromere_inner_repeat_region
|
|
1781
|
+
0001799 regional_centromere_outer_repeat_region
|
|
1782
|
+
0001800 tasiRNA
|
|
1783
|
+
0001801 tasiRNA_primary_transcript
|
|
1784
|
+
0001802 increased_polyadenylation_variant
|
|
1785
|
+
0001803 decreased_polyadenylation_variant
|
|
1786
|
+
0001804 DDB_box
|
|
1787
|
+
0001805 destruction_box
|
|
1788
|
+
0001806 ER_retention_signal
|
|
1789
|
+
0001807 KEN_box
|
|
1790
|
+
0001808 mitochondrial_targeting_signal
|
|
1791
|
+
0001809 signal_anchor
|
|
1792
|
+
0001810 PIP_box
|
|
1793
|
+
0001811 phosphorylation_site
|
|
1794
|
+
0001812 transmembrane_helix
|
|
1795
|
+
0001813 vacuolar_sorting_signal
|
|
1796
|
+
0001814 coding_variant_quality
|
|
1797
|
+
0001815 synonymous
|
|
1798
|
+
0001816 non_synonymous
|
|
1799
|
+
0001817 inframe
|
|
1800
|
+
0001818 protein_altering_variant
|
|
1801
|
+
0001819 synonymous_variant
|
|
1802
|
+
0001820 inframe_indel
|
|
1803
|
+
0001821 inframe_insertion
|
|
1804
|
+
0001822 inframe_deletion
|
|
1805
|
+
0001823 conservative_inframe_insertion
|
|
1806
|
+
0001824 disruptive_inframe_insertion
|
|
1807
|
+
0001825 conservative_inframe_deletion
|
|
1808
|
+
0001826 disruptive_inframe_deletion
|
|
1809
|
+
0001827 mRNA_read
|
|
1810
|
+
0001828 genomic_DNA_read
|
|
1811
|
+
0001829 mRNA_contig
|
|
1812
|
+
0001830 AFLP_fragment
|
|
1813
|
+
0001831 protein_hmm_match
|
|
1814
|
+
0001832 immunoglobulin_region
|
|
1815
|
+
0001833 V_region
|
|
1816
|
+
0001834 C_region
|
|
1817
|
+
0001835 N_region
|
|
1818
|
+
0001836 S_region
|
|
1819
|
+
0001837 mobile_element_insertion
|
|
1820
|
+
0001838 novel_sequence_insertion
|
|
1821
|
+
0001839 CSL_response_element
|
|
1822
|
+
0001840 GATA_box
|
|
1823
|
+
0001841 polymorphic_pseudogene
|
|
1824
|
+
0001842 AP_1_binding_site
|
|
1825
|
+
0001843 CRE
|
|
1826
|
+
0001844 CuRE
|
|
1827
|
+
0001845 DRE
|
|
1828
|
+
0001846 FLEX_element
|
|
1829
|
+
0001847 forkhead_motif
|
|
1830
|
+
0001848 homol_D_box
|
|
1831
|
+
0001849 homol_E_box
|
|
1832
|
+
0001850 HSE
|
|
1833
|
+
0001851 iron_repressed_GATA_element
|
|
1834
|
+
0001852 mating_type_M_box
|
|
1835
|
+
0001853 androgen_response_element
|
|
1836
|
+
0001854 smFISH_probe
|
|
1837
|
+
0001855 MCB
|
|
1838
|
+
0001856 CCAAT_motif
|
|
1839
|
+
0001857 Ace2_UAS
|
|
1840
|
+
0001858 TR_box
|
|
1841
|
+
0001859 STREP_motif
|
|
1842
|
+
0001860 rDNA_intergenic_spacer_element
|
|
1843
|
+
0001861 sterol_regulatory_element
|
|
1844
|
+
0001862 GT_dinucleotide_repeat
|
|
1845
|
+
0001863 GTT_trinucleotide_repeat
|
|
1846
|
+
0001864 Sap1_recognition_motif
|
|
1847
|
+
0001865 CDRE_motif
|
|
1848
|
+
0001866 BAC_read_contig
|
|
1849
|
+
0001867 candidate_gene
|
|
1850
|
+
0001868 positional_candidate_gene
|
|
1851
|
+
0001869 functional_candidate_gene
|
|
1852
|
+
0001870 enhancerRNA
|
|
1853
|
+
0001871 PCB
|
|
1854
|
+
0001872 rearrangement_region
|
|
1855
|
+
0001873 interchromosomal_breakpoint
|
|
1856
|
+
0001874 intrachromosomal_breakpoint
|
|
1857
|
+
0001875 unassigned_supercontig
|
|
1858
|
+
0001876 partial_genomic_sequence_assembly
|
|
1859
|
+
0001877 lncRNA
|
|
1860
|
+
0001878 feature_variant
|
|
1861
|
+
0001879 feature_ablation
|
|
1862
|
+
0001880 feature_amplification
|
|
1863
|
+
0001881 feature_translocation
|
|
1864
|
+
0001882 feature_fusion
|
|
1865
|
+
0001883 transcript_translocation
|
|
1866
|
+
0001884 regulatory_region_translocation
|
|
1867
|
+
0001885 TFBS_translocation
|
|
1868
|
+
0001886 transcript_fusion
|
|
1869
|
+
0001887 regulatory_region_fusion
|
|
1870
|
+
0001888 TFBS_fusion
|
|
1871
|
+
0001889 transcript_amplification
|
|
1872
|
+
0001890 transcript_regulatory_region_fusion
|
|
1873
|
+
0001891 regulatory_region_amplification
|
|
1874
|
+
0001892 TFBS_amplification
|
|
1875
|
+
0001893 transcript_ablation
|
|
1876
|
+
0001894 regulatory_region_ablation
|
|
1877
|
+
0001895 TFBS_ablation
|
|
1878
|
+
0001896 transposable_element_CDS
|
|
1879
|
+
0001897 transposable_element_pseudogene
|
|
1880
|
+
0001898 dg_repeat
|
|
1881
|
+
0001899 dh_repeat
|
|
1882
|
+
0001901 AACCCT_box
|
|
1883
|
+
0001902 splice_region
|
|
1884
|
+
0001904 antisense_lncRNA
|
|
1885
|
+
0001905 regional_centromere_outer_repeat_transcript
|
|
1886
|
+
0001906 feature_truncation
|
|
1887
|
+
0001907 feature_elongation
|
|
1888
|
+
0001908 internal_feature_elongation
|
|
1889
|
+
0001909 frameshift_elongation
|
|
1890
|
+
0001910 frameshift_truncation
|
|
1891
|
+
0001911 copy_number_increase
|
|
1892
|
+
0001912 copy_number_decrease
|
|
1893
|
+
0001913 bacterial_RNApol_promoter_sigma_ecf_element
|
|
1894
|
+
0001914 rDNA_replication_fork_barrier
|
|
1895
|
+
0001915 transcription_start_cluster
|
|
1896
|
+
0001916 CAGE_tag
|
|
1897
|
+
0001917 CAGE_cluster
|
|
1898
|
+
0001918 5_methylcytosine
|
|
1899
|
+
0001919 4_methylcytosine
|
|
1900
|
+
0001920 N6_methyladenine
|
|
1901
|
+
0001921 mitochondrial_contig
|
|
1902
|
+
0001922 mitochondrial_supercontig
|
|
1903
|
+
0001923 TERRA
|
|
1904
|
+
0001924 ARRET
|
|
1905
|
+
0001925 ARIA
|
|
1906
|
+
0001926 anti_ARRET
|
|
1907
|
+
0001927 telomeric_transcript
|
|
1908
|
+
0001928 distal_duplication
|
|
1909
|
+
0001929 mitochondrial_DNA_read
|
|
1910
|
+
0001930 chloroplast_DNA_read
|
|
1911
|
+
0001931 consensus_gDNA
|
|
1912
|
+
0001932 restriction_enzyme_five_prime_single_strand_overhang
|
|
1913
|
+
0001933 restriction_enzyme_three_prime_single_strand_overhang
|
|
1914
|
+
0001934 monomeric_repeat
|
|
1915
|
+
0001935 H3K20_trimethylation_site
|
|
1916
|
+
0001936 H3K36_acetylation_site
|
|
1917
|
+
0001937 H2BK12_acetylation_site
|
|
1918
|
+
0001938 H2AK5_acetylation_site
|
|
1919
|
+
0001939 H4K12_acetylation_site
|
|
1920
|
+
0001940 H2BK120_acetylation_site
|
|
1921
|
+
0001941 H4K91_acetylation_site
|
|
1922
|
+
0001942 H2BK20_acetylation_site
|
|
1923
|
+
0001943 H3K4_acetylation_site
|
|
1924
|
+
0001944 H2AK9_acetylation_site
|
|
1925
|
+
0001945 H3K56_acetylation_site
|
|
1926
|
+
0001946 H2BK15_acetylation_site
|
|
1927
|
+
0001947 H3R2_monomethylation_site
|
|
1928
|
+
0001948 H3R2_dimethylation_site
|
|
1929
|
+
0001949 H4R3_dimethylation_site
|
|
1930
|
+
0001950 H4K4_trimethylation_site
|
|
1931
|
+
0001951 H3K23_dimethylation_site
|
|
1932
|
+
0001952 promoter_flanking_region
|
|
1933
|
+
0001953 restriction_enzyme_assembly_scar
|
|
1934
|
+
0001954 restriction_enzyme_region
|
|
1935
|
+
0001955 protein_stability_element
|
|
1936
|
+
0001956 protease_site
|
|
1937
|
+
0001957 RNA_stability_element
|
|
1938
|
+
0001958 lariat_intron
|
|
1939
|
+
0001959 TCT_motif
|
|
1940
|
+
0001960 5_hydroxymethylcytosine
|
|
1941
|
+
0001961 5_formylcytosine
|
|
1942
|
+
0001962 modified_adenine
|
|
1943
|
+
0001963 modified_cytosine
|
|
1944
|
+
0001964 modified_guanine
|
|
1945
|
+
0001965 8_oxoguanine
|
|
1946
|
+
0001966 5_carboxylcytosine
|
|
1947
|
+
0001967 8_oxoadenine
|
|
1948
|
+
0001968 coding_transcript_variant
|
|
1949
|
+
0001969 coding_transcript_intron_variant
|
|
1950
|
+
0001970 non_coding_transcript_intron_variant
|
|
1951
|
+
0001971 zinc_finger_binding_site
|
|
1952
|
+
0001972 histone_4_acetylation_site
|
|
1953
|
+
0001973 histone_3_acetylation_site
|
|
1954
|
+
0001974 CTCF_binding_site
|
|
1955
|
+
0001975 five_prime_sticky_end_restriction_enzyme_cleavage_site
|
|
1956
|
+
0001976 three_prime_sticky_end_restriction_enzyme_cleavage_site
|
|
1957
|
+
0001977 ribonuclease_site
|
|
1958
|
+
0001978 signature
|
|
1959
|
+
0001979 RNA_stability_element
|
|
1960
|
+
0001980 G_box
|
|
1961
|
+
0001981 L_box
|
|
1962
|
+
0001982 I-box
|
|
1963
|
+
0001983 5_prime_UTR_premature_start_codon_variant
|
|
1964
|
+
0001984 silent_mating_type_cassette_array
|
|
1965
|
+
0001985 Okazaki_fragment
|
|
1966
|
+
0001986 upstream_transcript_variant
|
|
1967
|
+
0001987 downstream_transcript_variant
|
|
1968
|
+
0001988 5_prime_UTR_premature_start_codon_gain_variant
|
|
1969
|
+
0001989 5_prime_UTR_premature_start_codon_loss_variant
|
|
1970
|
+
0001990 five_prime_UTR_premature_start_codon_location_variant
|
|
1971
|
+
0001991 consensus_AFLP_fragment
|
|
1972
|
+
0001992 nonsynonymous_variant
|
|
1973
|
+
0001993 extended_cis_splice_site
|
|
1974
|
+
0001994 intron_base_5
|
|
1975
|
+
0001995 extended_intronic_splice_region_variant
|
|
1976
|
+
0001996 extended_intronic_splice_region
|
|
1977
|
+
0001997 subtelomere
|
|
1978
|
+
0001998 sgRNA
|
|
1979
|
+
0001999 mating_type_region_motif
|
|
1980
|
+
0002001 Y_region
|
|
1981
|
+
0002002 Z1_region
|
|
1982
|
+
0002003 Z2_region
|
|
1983
|
+
0002004 ARS_consensus_sequence
|
|
1984
|
+
0002005 DSR_motif
|
|
1985
|
+
0002006 zinc_repressed_element
|
|
1986
|
+
0002007 MNV
|
|
1987
|
+
0002008 rare_amino_acid_variant
|
|
1988
|
+
0002009 selenocysteine_loss
|
|
1989
|
+
0002010 pyrrolysine_loss
|
|
1990
|
+
0002011 intragenic_variant
|
|
1991
|
+
0002012 start_lost
|
|
1992
|
+
0002013 5_prime_UTR_truncation
|
|
1993
|
+
0002014 5_prime_UTR_elongation
|
|
1994
|
+
0002015 3_prime_UTR_truncation
|
|
1995
|
+
0002016 3_prime_UTR_elongation
|
|
1996
|
+
0002017 conserved_intergenic_variant
|
|
1997
|
+
0002018 conserved_intron_variant
|
|
1998
|
+
0002019 start_retained_variant
|
|
1999
|
+
0002020 boundary_element
|
|
2000
|
+
0002021 mating_type_region_replication_fork_barrier
|
|
2001
|
+
0002022 priRNA
|
|
2002
|
+
0002023 multiplexing_sequence_identifier
|
|
2003
|
+
0002024 W_region
|
|
2004
|
+
0002025 cis_acting_homologous_chromosome_pairing_region
|
|
2005
|
+
0002026 intein_encoding_region
|
|
2006
|
+
0002027 uORF
|
|
2007
|
+
0002028 sORF
|
|
2008
|
+
0002029 tnaORF
|
|
2009
|
+
0002030 X_region
|
|
2010
|
+
0002031 shRNA
|
|
2011
|
+
0002032 moR
|
|
2012
|
+
0002033 loR
|
|
2013
|
+
0002034 miR_encoding_snoRNA_primary_transcript
|
|
2014
|
+
0002035 lncRNA_primary_transcript
|
|
2015
|
+
0002036 miR_encoding_lncRNA_primary_transcript
|
|
2016
|
+
0002037 miR_encoding_tRNA_primary_transcript
|
|
2017
|
+
0002038 shRNA_primary_transcript
|
|
2018
|
+
0002039 miR_encoding_shRNA_primary_transcript
|
|
2019
|
+
0002040 vaultRNA_primary_transcript
|
|
2020
|
+
0002041 miR_encoding_vaultRNA_primary_transcript
|
|
2021
|
+
0002042 Y_RNA_primary_transcript
|
|
2022
|
+
0002043 miR_encoding_Y_RNA_primary_transcript
|
|
2023
|
+
0002044 TCS_element
|
|
2024
|
+
0002045 pheromone_response_element
|
|
2025
|
+
0002046 FRE
|
|
2026
|
+
0002047 transcription_pause_site
|
|
2027
|
+
0002048 disabled_reading_frame
|
|
2028
|
+
0002049 H3K27_acetylation_site
|
|
2029
|
+
0002050 constitutive_promoter
|
|
2030
|
+
0002051 inducible_promoter
|
|
2031
|
+
0002052 dominant_negative_variant
|
|
2032
|
+
0002053 gain_of_function_variant
|
|
2033
|
+
0002054 loss_of_function_variant
|
|
2034
|
+
0002055 null_mutation
|
|
2035
|
+
0002056 intronic_splicing_silencer
|
|
2036
|
+
0002057 intronic_splicing_enhancer
|
|
2037
|
+
0002058 exonic_splicing_silencer
|
|
2038
|
+
0002059 recombination_enhancer
|
|
2039
|
+
0002060 interchromosomal_translocation
|
|
2040
|
+
0002061 intrachromosomal_translocation
|
|
2041
|
+
0002062 complex_chromosomal_rearrangement
|
|
2042
|
+
0002063 Alu_insertion
|
|
2043
|
+
0002064 LINE1_insertion
|
|
2044
|
+
0002065 SVA_insertion
|
|
2045
|
+
0002066 mobile_element_deletion
|
|
2046
|
+
0002067 HERV_deletion
|
|
2047
|
+
0002068 SVA_deletion
|
|
2048
|
+
0002069 LINE1_deletion
|
|
2049
|
+
0002070 Alu_deletion
|
|
2050
|
+
0002071 CDS_supported_by_peptide_spectrum_match
|
|
2051
|
+
0002072 sequence_comparison
|
|
2052
|
+
0002073 no_sequence_alteration
|
|
2053
|
+
0002074 intergenic_1kb_variant
|
|
2054
|
+
0002075 incomplete_transcript_variant
|
|
2055
|
+
0002076 incomplete_transcript_3UTR_variant
|
|
2056
|
+
0002077 incomplete_transcript_5UTR_variant
|
|
2057
|
+
0002078 incomplete_transcript_intronic_variant
|
|
2058
|
+
0002079 incomplete_transcript_splice_region_variant
|
|
2059
|
+
0002080 incomplete_transcript_exonic_variant
|
|
2060
|
+
0002081 incomplete_transcript_CDS
|
|
2061
|
+
0002082 incomplete_transcript_coding_splice_variant
|
|
2062
|
+
0002083 2KB_downstream_variant
|
|
2063
|
+
0002084 exonic_splice_region_variant
|
|
2064
|
+
0002085 unidirectional_gene_fusion
|
|
2065
|
+
0002086 bidirectional_gene_fusion
|
|
2066
|
+
0002087 pseudogenic_CDS
|
|
2067
|
+
0002088 non_coding_transcript_splice_region_variant
|
|
2068
|
+
0002089 3_prime_UTR_exon_variant
|
|
2069
|
+
0002090 3_prime_UTR_intron_variant
|
|
2070
|
+
0002091 5_prime_UTR_intron_variant
|
|
2071
|
+
0002092 5_prime_UTR_exon_variant
|
|
2072
|
+
0002093 structural_interaction_variant
|
|
2073
|
+
0002094 non_allelic_homologous_recombination_region
|
|
2074
|
+
0002095 scaRNA
|
|
2075
|
+
0002096 short_tandem_repeat_variation
|
|
2076
|
+
0002097 vertebrate_immune_system_pseudogene
|
|
2077
|
+
0002098 immunoglobulin_pseudogene
|
|
2078
|
+
0002099 T_cell_receptor_pseudogene
|
|
2079
|
+
0002100 IG_C_pseudogene
|
|
2080
|
+
0002101 IG_J_pseudogene
|
|
2081
|
+
0002102 IG_V_pseudogene
|
|
2082
|
+
0002103 TR_V_pseudogene
|
|
2083
|
+
0002104 TR_J_pseudogene
|
|
2084
|
+
0002105 translated_processed_pseudogene
|
|
2085
|
+
0002106 translated_unprocessed_pseudogene
|
|
2086
|
+
0002107 transcribed_unprocessed_pseudogene
|
|
2087
|
+
0002108 transcribed_unitary_pseudogene
|
|
2088
|
+
0002109 transcribed_processed_pseudogene
|
|
2089
|
+
0002110 polymorphic_pseudogene_with_retained_intron
|
|
2090
|
+
0002111 pseudogene_processed_transcript
|
|
2091
|
+
0002112 coding_transcript_with_retained_intron
|
|
2092
|
+
0002113 lncRNA_with_retained_intron
|
|
2093
|
+
0002114 NMD_transcript
|
|
2094
|
+
0002115 pseudogenic_transcript_with_retained_intron
|
|
2095
|
+
0002116 polymorphic_pseudogene_processed_transcript
|
|
2096
|
+
0002117 <new term>
|
|
2097
|
+
0002118 NMD_polymorphic_pseudogene_transcript
|
|
2098
|
+
0002119 allelic_frequency
|
|
2099
|
+
0002120 three_prime_overlapping_ncrna
|
|
2100
|
+
0002121 vertebrate_immune_system_gene
|
|
2101
|
+
0002122 immunoglobulin_gene
|
|
2102
|
+
0002123 IG_C_gene
|
|
2103
|
+
0002124 IG_D_gene
|
|
2104
|
+
0002125 IG_J_gene
|
|
2105
|
+
0002126 IG_V_gene
|
|
2106
|
+
0002127 lncRNA_gene
|
|
2107
|
+
0002128 mt_rRNA
|
|
2108
|
+
0002129 mt_tRNA
|
|
2109
|
+
0002130 NSD_transcript
|
|
2110
|
+
0002131 sense_intronic_lncRNA
|
|
2111
|
+
0002132 sense_overlap_lncRNA
|
|
2112
|
+
0002133 T_cell_receptor_gene
|
|
2113
|
+
0002134 TR_C_Gene
|
|
2114
|
+
0002135 TR_D_Gene
|
|
2115
|
+
0002136 TR_J_Gene
|
|
2116
|
+
0002137 TR_V_Gene
|
|
2117
|
+
0002138 predicted_transcript
|
|
2118
|
+
0002139 unconfirmed_transcript
|
|
2119
|
+
0002140 early_origin_of_replication
|
|
2120
|
+
0002141 late_origin_of_replication
|
|
2121
|
+
0002142 histone_2A_acetylation_site
|
|
2122
|
+
0002143 histone_2B_acetylation_site
|
|
2123
|
+
0002144 histone_2AZ_acetylation_site
|
|
2124
|
+
0002145 H2AZK4_acetylation_site
|
|
2125
|
+
0002146 H2AZK7_acetylation_site
|
|
2126
|
+
0002147 H2AZK11_acetylation_site
|
|
2127
|
+
0002148 H2AZK13_acetylation_site
|
|
2128
|
+
0002149 H2AZK15_acetylation_site
|
|
2129
|
+
0002150 AUG_initiated_uORF
|
|
2130
|
+
0002151 non_AUG_initiated_uORF
|
|
2131
|
+
0002152 genic_downstream_transcript_variant
|
|
2132
|
+
0002153 genic_upstream_transcript_variant
|
|
2133
|
+
0002154 mitotic_recombination_region
|
|
2134
|
+
0002155 meiotic_recombination_region
|
|
2135
|
+
0002156 CArG_box
|
|
2136
|
+
0002157 Mat2P
|
|
2137
|
+
0002158 Mat3M
|
|
2138
|
+
0002159 SHP_box
|
|
2139
|
+
0002160 sequence_length_variant
|
|
2140
|
+
0002161 short_tandem_repeat_change
|
|
2141
|
+
0002162 short_tandem_repeat_expansion
|
|
2142
|
+
0002163 short_tandem_repeat_contraction
|
|
2143
|
+
0002164 H2BK5_acetylation_site
|
|
2144
|
+
0002165 trinucleotide_repeat_expansion
|
|
2145
|
+
0002166 ref_miRNA
|
|
2146
|
+
0002167 isomiR
|
|
2147
|
+
0002168 RNA_thermometer
|
|
2148
|
+
0002169 splice_polypyrimidine_tract_variant
|
|
2149
|
+
0002170 splice_donor_region_variant
|
|
2150
|
+
0002171 telomeric_D_loop
|
|
2151
|
+
0002172 sequence_alteration_artifact
|
|
2152
|
+
0002173 indel_artifact
|
|
2153
|
+
0002174 deletion_artifact
|
|
2154
|
+
0002175 insertion_artifact
|
|
2155
|
+
0002176 substitution_artifact
|
|
2156
|
+
0002177 duplication_artifact
|
|
2157
|
+
0002178 SNV_artifact
|
|
2158
|
+
0002179 MNV_artifact
|
|
2159
|
+
0002180 enzymatic_RNA_gene
|
|
2160
|
+
0002181 ribozyme_gene
|
|
2161
|
+
0002182 antisense_lncRNA_gene
|
|
2162
|
+
0002183 sense_overlap_lncRNA_gene
|
|
2163
|
+
0002184 sense_intronic_lncRNA_gene
|
|
2164
|
+
0002185 bidirectional_promoter_lncRNA_gene
|
|
2165
|
+
0002186 mutational_hotspot
|
|
2166
|
+
0002187 HERV_insertion
|
|
2167
|
+
0002188 functional_gene_region
|
|
2168
|
+
0002189 allelic_pseudogene
|
|
2169
|
+
0002190 enhancer_blocking_element
|
|
2170
|
+
0002191 imprinting_control_region
|
|
2171
|
+
0002192 flanking_repeat
|
|
2172
|
+
0002193 processed_pseudogenic_rRNA
|
|
2173
|
+
0002194 unprocessed_pseudogenic_rRNA
|
|
2174
|
+
0002195 unitary_pseudogenic_rRNA
|
|
2175
|
+
0002196 allelic_pseudogenic_rRNA
|
|
2176
|
+
0002197 processed_pseudogenic_tRNA
|
|
2177
|
+
0002198 unprocessed_pseudogenic_tRNA
|
|
2178
|
+
0002199 unitary_pseudogenic_tRNA
|
|
2179
|
+
0002200 allelic_pseudogenic_tRNA
|
|
2180
|
+
0002201 terminal_repeat
|
|
2181
|
+
0002202 repeat_instability_region
|
|
2182
|
+
0002203 replication_start_site
|
|
2183
|
+
0002204 nucleotide_cleavage_site
|
|
2184
|
+
0002205 response_element
|
|
2185
|
+
0002206 sequence_source
|
|
2186
|
+
0002207 UNAAAC_motif
|
|
2187
|
+
0002208 long_terminal_repeat_transcript
|
|
2188
|
+
0002209 genomic_DNA_contig
|
|
2189
|
+
0002210 presence_absence_variation
|
|
2190
|
+
0002211 circular_plasmid
|
|
2191
|
+
0002212 linear_plasmid
|
|
2192
|
+
0002213 transcription_termination_signal
|
|
2193
|
+
0002214 redundant_inserted_stop_gained
|
|
2194
|
+
0002215 Zas1_recognition_motif
|
|
2195
|
+
0002216 Pho7_binding_site
|
|
2196
|
+
0002217 unspecified_indel
|
|
2197
|
+
0002218 functionally_abnormal
|
|
2198
|
+
0002219 functionally_normal
|
|
2199
|
+
0002220 function_uncertain_variant
|
|
2200
|
+
0002221 eukaryotic_promoter
|
|
2201
|
+
0002222 prokaryotic_promoter
|
|
2202
|
+
0002223 inert_DNA_spacer
|
|
2203
|
+
0002224 2A_self_cleaving_peptide_region
|
|
2204
|
+
0002225 LOZ1_response_element
|
|
2205
|
+
0002226 group_IIC_intron
|
|
2206
|
+
0002227 CDS_extension
|
|
2207
|
+
0002228 CDS_five_prime_extension
|
|
2208
|
+
0002229 CDS_three_prime_extension
|
|
2209
|
+
0002230 CAAX_box
|
|
2210
|
+
0002231 self_cleaving_ribozyme
|
|
2211
|
+
0002232 selection_marker
|
|
2212
|
+
0002233 homologous_chromosome_recognition_and_pairing_locus
|
|
2213
|
+
0002234 pumilio_response_element
|
|
2214
|
+
0002235 SUMO_interaction_motif
|
|
2215
|
+
0002236 cytosolic_rRNA_18S_gene
|
|
2216
|
+
0002237 cytosolic_rRNA_16S_gene
|
|
2217
|
+
0002238 cytosolic_rRNA_5S_gene
|
|
2218
|
+
0002239 cytosolic_rRNA_28S_gene
|
|
2219
|
+
0002240 cytosolic_rRNA_5_8S_gene
|
|
2220
|
+
0002241 rRNA_21S_gene
|
|
2221
|
+
0002242 cytosolic_rRNA_25S_gene
|
|
2222
|
+
0002243 cytosolic_rRNA_23S_gene
|
|
2223
|
+
0002244 partially_duplicated_transcript
|
|
2224
|
+
0002245 five_prime_duplicated_transcript
|
|
2225
|
+
0002246 three_prime_duplicated_transcript
|
|
2226
|
+
0002247 sncRNA
|
|
2227
|
+
0002248 spurious_protein
|
|
2228
|
+
0002249 mature_protein_region_of_CDS
|
|
2229
|
+
0002250 propeptide_region_of_CDS
|
|
2230
|
+
0002251 signal_peptide_region_of_CDS
|
|
2231
|
+
0002252 transit_peptide_region_of_CDS
|
|
2232
|
+
0002253 stem_loop_region
|
|
2233
|
+
0002254 loop
|
|
2234
|
+
0002255 stem
|
|
2235
|
+
0002256 non_complimentary_stem
|
|
2236
|
+
0002257 knob
|
|
2237
|
+
0002258 teb1_recognition_motif
|
|
2238
|
+
0002259 polyA_site_cluster
|
|
2239
|
+
0002260 LARD
|
|
2240
|
+
0002261 TRIM
|
|
2241
|
+
0002262 Watson_strand
|
|
2242
|
+
0002263 Crick_strand
|
|
2243
|
+
0002264 Copia_LTR_retrotransposon
|
|
2244
|
+
0002265 Gypsy_LTR_retrotransposon
|
|
2245
|
+
0002266 Bel_Pao_LTR_retrotransposon
|
|
2246
|
+
0002267 Retrovirus_LTR_retrotransposon
|
|
2247
|
+
0002268 Endogenous_Retrovirus_LTR_retrotransposon
|
|
2248
|
+
0002269 R2_LINE_retrotransposon
|
|
2249
|
+
0002270 RTE_LINE_retrotransposon
|
|
2250
|
+
0002271 Jockey_LINE_retrotransposon
|
|
2251
|
+
0002272 L1_LINE_retrotransposon
|
|
2252
|
+
0002273 I_LINE_retrotransposon
|
|
2253
|
+
0002274 tRNA_SINE_retrotransposon
|
|
2254
|
+
0002275 7SL_SINE_retrotransposon
|
|
2255
|
+
0002276 5S_SINE_retrotransposon
|
|
2256
|
+
0002277 Crypton_YR_transposon
|
|
2257
|
+
0002278 Tc1_Mariner_TIR_transposon
|
|
2258
|
+
0002279 hAT_TIR_transposon
|
|
2259
|
+
0002280 Mutator_TIR_transposon
|
|
2260
|
+
0002281 Merlin_TIR_transposon
|
|
2261
|
+
0002282 Transib_TIR_transposon
|
|
2262
|
+
0002283 piggyBac_TIR_transposon
|
|
2263
|
+
0002284 PIF_Harbinger_TIR_transposon
|
|
2264
|
+
0002285 CACTA_TIR_transposon
|
|
2265
|
+
0002286 YR_retrotransposon
|
|
2266
|
+
0002287 DIRS_YR_retrotransposon
|
|
2267
|
+
0002288 Ngaro_YR_retrotransposon
|
|
2268
|
+
0002289 Viper_YR_retrotransposon
|
|
2269
|
+
0002290 Penelope_retrotransposon
|
|
2270
|
+
0002291 circular_ncRNA
|
|
2271
|
+
0002292 circular_mRNA
|
|
2272
|
+
0002293 mitochondrial_control_region
|
|
2273
|
+
0002294 mitochondrial_D_loop
|
|
2274
|
+
0002295 transcription_factor_regulatory_site
|
|
2275
|
+
0002296 TFRS_module
|
|
2276
|
+
0002297 TFRS_collection
|
|
2277
|
+
0002298 simple_operon
|
|
2278
|
+
0002299 complex_operon
|
|
2279
|
+
0002300 unit_of_gene_expression
|
|
2280
|
+
0002301 transcription_unit
|
|
2281
|
+
0002302 simple_regulon
|
|
2282
|
+
0002303 complex_regulon
|
|
2283
|
+
0002304 topologically_associated_domain
|
|
2284
|
+
0002305 topologically_associated_domain_boundary
|
|
2285
|
+
0002306 chromatin_regulatory_region
|
|
2286
|
+
0002307 DNA_loop
|
|
2287
|
+
0002308 DNA_loop_anchor
|
|
2288
|
+
0002309 core_promoter_element
|
|
2289
|
+
0002310 cryptic_promoter
|
|
2290
|
+
0002311 viral_promoter
|
|
2291
|
+
0002312 core_prokaryotic_promoter_element
|
|
2292
|
+
0002313 core_viral_promoter_element
|
|
2293
|
+
0002314 altered_gene_product_level
|
|
2294
|
+
0002315 increased_gene_product_level
|
|
2295
|
+
0002316 decreased_gene_product_level
|
|
2296
|
+
0002317 absent_gene_product
|
|
2297
|
+
0002318 altered_gene_product_sequence
|
|
2298
|
+
0002319 NMD_triggering_variant
|
|
2299
|
+
0002320 NMD_escaping_variant
|
|
2300
|
+
0002321 stop_gained_NMD_triggering
|
|
2301
|
+
0002322 stop_gained_NMD_escaping
|
|
2302
|
+
0002323 frameshift_variant_NMD_triggering
|
|
2303
|
+
0002324 frameshift_variant_NMD_escaping
|
|
2304
|
+
0002325 splice_donor_variant_NMD_triggering
|
|
2305
|
+
0002326 splice_donor_variant_NMD_escaping
|
|
2306
|
+
0002327 splice_acceptor_variant_NMD_triggering
|
|
2307
|
+
0002328 splice_acceptor_variant_NMD_escaping
|
|
2308
|
+
0002329 minus_1_translational_frameshift
|
|
2309
|
+
0002330 minus_2_translational_frameshift
|
|
2310
|
+
0002331 accessible_DNA_region
|
|
2311
|
+
0002332 epigenomically_modified_region
|
|
2312
|
+
0002333 amber_stop_codon
|
|
2313
|
+
0002334 ochre_stop_codon
|
|
2314
|
+
0002335 opal_stop_codon
|
|
2315
|
+
0002336 cytosolic_rRNA_2S_gene
|
|
2316
|
+
0002337 cytosolic_2S_rRNA
|
|
2317
|
+
0002338 U7_snRNA
|
|
2318
|
+
0002339 scaRNA_gene
|
|
2319
|
+
0002340 RNA_7SK
|
|
2320
|
+
0002341 RNA_7SK_gene
|
|
2321
|
+
0002342 sncRNA_gene
|
|
2322
|
+
0002343 cytosolic_rRNA
|
|
2323
|
+
0002344 mt_SSU_rRNA
|
|
2324
|
+
0002345 mt_LSU_rRNA
|
|
2325
|
+
0002346 plastid_rRNA
|
|
2326
|
+
0002347 plastid_SSU_rRNA
|
|
2327
|
+
0002348 plastid_LSU_rRNA
|
|
2328
|
+
0002349 fragile_site
|
|
2329
|
+
0002350 common_fragile_site
|
|
2330
|
+
0002351 rare_fragile_site
|
|
2331
|
+
0002352 sisRNA
|
|
2332
|
+
0002353 sbRNA_gene
|
|
2333
|
+
0002354 sbRNA
|
|
2334
|
+
0002355 hpRNA_gene
|
|
2335
|
+
0002356 hpRNA
|
|
2336
|
+
0002357 biosynthetic_gene_cluster
|
|
2337
|
+
0002358 vault_RNA_gene
|
|
2338
|
+
0002359 Y_RNA_gene
|
|
2339
|
+
0002360 cytosolic_rRNA_gene
|
|
2340
|
+
0002361 cytosolic_LSU_rRNA_gene
|
|
2341
|
+
0002362 cytosolic_SSU_rRNA_gene
|
|
2342
|
+
0002363 mt_rRNA_gene
|
|
2343
|
+
0002364 mt_LSU_rRNA_gene
|
|
2344
|
+
0002365 mt_SSU_rRNA_gene
|
|
2345
|
+
0002366 plastid_rRNA_gene
|
|
2346
|
+
0002367 plastid_LSU_rRNA_gene
|
|
2347
|
+
0002368 plastid_SSU_rRNA_gene
|
|
2348
|
+
0002369 C_D_box_scaRNA
|
|
2349
|
+
0002370 H_ACA_box_scaRNA
|
|
2350
|
+
0002371 C-D_H_ACA_box_scaRNA
|
|
2351
|
+
0002372 C_D_box_scaRNA_gene
|
|
2352
|
+
0002373 H_ACA_box_scaRNA_gene
|
|
2353
|
+
0002374 C-D_H_ACA_box_scaRNA_gene
|
|
2354
|
+
0002375 C_D_box_snoRNA_gene
|
|
2355
|
+
0002376 H_ACA_box_snoRNA_gene
|
|
2356
|
+
0002377 U14_snoRNA_gene
|
|
2357
|
+
0002378 U3_snoRNA_gene
|
|
2358
|
+
0002379 methylation_guide_snoRNA_gene
|
|
2359
|
+
0002380 pseudouridylation_guide_snoRNA_gene
|
|
2360
|
+
0002381 bidirectional_promoter_lncRNA
|
|
2361
|
+
0002382 range_extender_element
|
|
2362
|
+
00000000002382 5_prime_UTR_uORF_variant
|
|
2363
|
+
0002383 oncogenic_variant
|
|
2364
|
+
0005836 regulatory_region
|
|
2365
|
+
0005837 U14_snoRNA_primary_transcript
|
|
2366
|
+
0005841 methylation_guide_snoRNA
|
|
2367
|
+
0005843 rRNA_cleavage_RNA
|
|
2368
|
+
0005845 exon_of_single_exon_gene
|
|
2369
|
+
0005847 cassette_array_member
|
|
2370
|
+
0005848 gene_cassette_member
|
|
2371
|
+
0005849 gene_subarray_member
|
|
2372
|
+
0005850 primer_binding_site
|
|
2373
|
+
0005851 gene_array
|
|
2374
|
+
0005852 gene_subarray
|
|
2375
|
+
0005853 gene_cassette
|
|
2376
|
+
0005854 gene_cassette_array
|
|
2377
|
+
0005855 gene_group
|
|
2378
|
+
0005856 selenocysteine_tRNA_primary_transcript
|
|
2379
|
+
0005857 selenocysteinyl_tRNA
|
|
2380
|
+
0005858 syntenic_region
|
|
2381
|
+
0100001 biochemical_region_of_peptide
|
|
2382
|
+
0100002 molecular_contact_region
|
|
2383
|
+
0100003 intrinsically_unstructured_polypeptide_region
|
|
2384
|
+
0100004 catmat_left_handed_three
|
|
2385
|
+
0100005 catmat_left_handed_four
|
|
2386
|
+
0100006 catmat_right_handed_three
|
|
2387
|
+
0100007 catmat_right_handed_four
|
|
2388
|
+
0100008 alpha_beta_motif
|
|
2389
|
+
0100009 lipoprotein_signal_peptide
|
|
2390
|
+
0100010 no_output
|
|
2391
|
+
0100011 cleaved_peptide_region
|
|
2392
|
+
0100012 peptide_coil
|
|
2393
|
+
0100013 hydrophobic_region_of_peptide
|
|
2394
|
+
0100014 n_terminal_region
|
|
2395
|
+
0100015 c_terminal_region
|
|
2396
|
+
0100016 central_hydrophobic_region_of_signal_peptide
|
|
2397
|
+
0100017 polypeptide_conserved_motif
|
|
2398
|
+
0100018 polypeptide_binding_motif
|
|
2399
|
+
0100019 polypeptide_catalytic_motif
|
|
2400
|
+
0100020 polypeptide_DNA_contact
|
|
2401
|
+
0100021 polypeptide_conserved_region
|
|
2402
|
+
1000002 substitution
|
|
2403
|
+
1000005 complex_substitution
|
|
2404
|
+
1000008 point_mutation
|
|
2405
|
+
1000009 transition
|
|
2406
|
+
1000010 pyrimidine_transition
|
|
2407
|
+
1000011 C_to_T_transition
|
|
2408
|
+
1000012 C_to_T_transition_at_pCpG_site
|
|
2409
|
+
1000013 T_to_C_transition
|
|
2410
|
+
1000014 purine_transition
|
|
2411
|
+
1000015 A_to_G_transition
|
|
2412
|
+
1000016 G_to_A_transition
|
|
2413
|
+
1000017 transversion
|
|
2414
|
+
1000018 pyrimidine_to_purine_transversion
|
|
2415
|
+
1000019 C_to_A_transversion
|
|
2416
|
+
1000020 C_to_G_transversion
|
|
2417
|
+
1000021 T_to_A_transversion
|
|
2418
|
+
1000022 T_to_G_transversion
|
|
2419
|
+
1000023 purine_to_pyrimidine_transversion
|
|
2420
|
+
1000024 A_to_C_transversion
|
|
2421
|
+
1000025 A_to_T_transversion
|
|
2422
|
+
1000026 G_to_C_transversion
|
|
2423
|
+
1000027 G_to_T_transversion
|
|
2424
|
+
1000028 intrachromosomal_mutation
|
|
2425
|
+
1000029 chromosomal_deletion
|
|
2426
|
+
1000030 chromosomal_inversion
|
|
2427
|
+
1000031 interchromosomal_mutation
|
|
2428
|
+
1000032 delins
|
|
2429
|
+
1000035 duplication
|
|
2430
|
+
1000036 inversion
|
|
2431
|
+
1000037 chromosomal_duplication
|
|
2432
|
+
1000038 intrachromosomal_duplication
|
|
2433
|
+
1000039 direct_tandem_duplication
|
|
2434
|
+
1000040 inverted_tandem_duplication
|
|
2435
|
+
1000041 intrachromosomal_transposition
|
|
2436
|
+
1000042 compound_chromosome
|
|
2437
|
+
1000043 Robertsonian_fusion
|
|
2438
|
+
1000044 chromosomal_translocation
|
|
2439
|
+
1000045 ring_chromosome
|
|
2440
|
+
1000046 pericentric_inversion
|
|
2441
|
+
1000047 paracentric_inversion
|
|
2442
|
+
1000048 reciprocal_chromosomal_translocation
|
|
2443
|
+
1000049 sequence_variation_affecting_transcript
|
|
2444
|
+
1000050 sequence_variant_causing_no_change_in_transcript
|
|
2445
|
+
1000054 sequence_variation_affecting_coding_sequence
|
|
2446
|
+
1000055 sequence_variant_causing_initiator_codon_change_in_transcript
|
|
2447
|
+
1000056 sequence_variant_causing_amino_acid_coding_codon_change_in_transcript
|
|
2448
|
+
1000057 sequence_variant_causing_synonymous_codon_change_in_transcript
|
|
2449
|
+
1000058 sequence_variant_causing_non_synonymous_codon_change_in_transcript
|
|
2450
|
+
1000059 sequence_variant_causing_missense_codon_change_in_transcript
|
|
2451
|
+
1000060 sequence_variant_causing_conservative_missense_codon_change_in_transcript
|
|
2452
|
+
1000061 sequence_variant_causing_nonconservative_missense_codon_change_in_transcript
|
|
2453
|
+
1000062 sequence_variant_causing_nonsense_codon_change_in_transcript
|
|
2454
|
+
1000063 sequence_variant_causing_terminator_codon_change_in_transcript
|
|
2455
|
+
1000064 sequence_variation_affecting_reading_frame
|
|
2456
|
+
1000065 frameshift_sequence_variation
|
|
2457
|
+
1000066 sequence_variant_causing_plus_1_frameshift_mutation
|
|
2458
|
+
1000067 sequence_variant_causing_minus_1_frameshift
|
|
2459
|
+
1000068 sequence_variant_causing_plus_2_frameshift
|
|
2460
|
+
1000069 sequence_variant_causing_minus_2_frameshift
|
|
2461
|
+
1000070 sequence_variant_affecting_transcript_processing
|
|
2462
|
+
1000071 sequence_variant_affecting_splicing
|
|
2463
|
+
1000072 sequence_variant_affecting_splice_donor
|
|
2464
|
+
1000073 sequence_variant_affecting_splice_acceptor
|
|
2465
|
+
1000074 sequence_variant_causing_cryptic_splice_activation
|
|
2466
|
+
1000075 sequence_variant_affecting_editing
|
|
2467
|
+
1000076 sequence_variant_affecting_transcription
|
|
2468
|
+
1000078 sequence_variant_decreasing_rate_of_transcription
|
|
2469
|
+
1000079 sequence_variation_affecting_transcript_sequence
|
|
2470
|
+
1000080 sequence_variant_increasing_rate_of_transcription
|
|
2471
|
+
1000081 sequence_variant_affecting_rate_of_transcription
|
|
2472
|
+
1000082 sequence variant_affecting_transcript_stability
|
|
2473
|
+
1000083 sequence_variant_increasing_transcript_stability
|
|
2474
|
+
1000084 sequence_variant_decreasing_transcript_stability
|
|
2475
|
+
1000085 sequence_variation_affecting_level_of_transcript
|
|
2476
|
+
1000086 sequence_variation_decreasing_level_of_transcript
|
|
2477
|
+
1000087 sequence_variation_increasing_level_of_transcript
|
|
2478
|
+
1000088 sequence_variant_affecting_translational_product
|
|
2479
|
+
1000089 sequence_variant_causing_no_change_of_translational_product
|
|
2480
|
+
1000092 sequence_variant_causing_complex_change_of_translational_product
|
|
2481
|
+
1000093 sequence_variant_causing_amino_acid_substitution
|
|
2482
|
+
1000094 sequence_variant_causing_conservative_amino_acid_substitution
|
|
2483
|
+
1000095 sequence_variant_causing_nonconservative_amino_acid_substitution
|
|
2484
|
+
1000096 sequence_variant_causing_amino_acid_insertion
|
|
2485
|
+
1000097 sequence_variant_causing_amino_acid_deletion
|
|
2486
|
+
1000098 sequence_variant_causing_polypeptide_truncation
|
|
2487
|
+
1000099 sequence_variant_causing_polypeptide_elongation
|
|
2488
|
+
1000100 mutation_causing_polypeptide_N_terminal_elongation
|
|
2489
|
+
1000101 mutation_causing_polypeptide_C_terminal_elongation
|
|
2490
|
+
1000102 sequence_variant_affecting_level_of_translational_product
|
|
2491
|
+
1000103 sequence_variant_decreasing_level_of_translation_product
|
|
2492
|
+
1000104 sequence_variant_increasing_level_of_translation_product
|
|
2493
|
+
1000105 sequence_variant_affecting_polypeptide_amino_acid_sequence
|
|
2494
|
+
1000106 mutation_causing_inframe_polypeptide_N_terminal_elongation
|
|
2495
|
+
1000107 mutation_causing_out_of_frame_polypeptide_N_terminal_elongation
|
|
2496
|
+
1000108 mutaton_causing_inframe_polypeptide_C_terminal_elongation
|
|
2497
|
+
1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation
|
|
2498
|
+
1000110 frame_restoring_sequence_variant
|
|
2499
|
+
1000111 sequence_variant_affecting_3D_structure_of_polypeptide
|
|
2500
|
+
1000112 sequence_variant_causing_no_3D_structural_change
|
|
2501
|
+
1000115 sequence_variant_causing_complex_3D_structural_change
|
|
2502
|
+
1000116 sequence_variant_causing_conformational_change
|
|
2503
|
+
1000117 sequence_variant_affecting_polypeptide_function
|
|
2504
|
+
1000118 sequence_variant_causing_loss_of_function_of_polypeptide
|
|
2505
|
+
1000119 sequence_variant_causing_inactive_ligand_binding_site
|
|
2506
|
+
1000120 sequence_variant_causing_inactive_catalytic_site
|
|
2507
|
+
1000121 sequence_variant_causing_polypeptide_localization_change
|
|
2508
|
+
1000122 sequence_variant_causing_polypeptide_post_translational_processing_change
|
|
2509
|
+
1000123 polypeptide_post_translational_processing_affected
|
|
2510
|
+
1000124 sequence_variant_causing_partial_loss_of_function_of_polypeptide
|
|
2511
|
+
1000125 sequence_variant_causing_gain_of_function_of_polypeptide
|
|
2512
|
+
1000126 sequence_variant_affecting_transcript_secondary_structure
|
|
2513
|
+
1000127 sequence_variant_causing_compensatory_transcript_secondary_structure_mutation
|
|
2514
|
+
1000132 sequence_variant_effect
|
|
2515
|
+
1000134 sequence_variant_causing_polypeptide_fusion
|
|
2516
|
+
1000136 autosynaptic_chromosome
|
|
2517
|
+
1000138 homo_compound_chromosome
|
|
2518
|
+
1000140 hetero_compound_chromosome
|
|
2519
|
+
1000141 chromosome_fission
|
|
2520
|
+
1000142 dextrosynaptic_chromosome
|
|
2521
|
+
1000143 laevosynaptic_chromosome
|
|
2522
|
+
1000144 free_duplication
|
|
2523
|
+
1000145 free_ring_duplication
|
|
2524
|
+
1000147 deficient_translocation
|
|
2525
|
+
1000148 inversion_cum_translocation
|
|
2526
|
+
1000149 bipartite_duplication
|
|
2527
|
+
1000150 cyclic_translocation
|
|
2528
|
+
1000151 bipartite_inversion
|
|
2529
|
+
1000152 uninverted_insertional_duplication
|
|
2530
|
+
1000153 inverted_insertional_duplication
|
|
2531
|
+
1000154 insertional_duplication
|
|
2532
|
+
1000155 interchromosomal_transposition
|
|
2533
|
+
1000156 inverted_interchromosomal_transposition
|
|
2534
|
+
1000157 uninverted_interchromosomal_transposition
|
|
2535
|
+
1000158 inverted_intrachromosomal_transposition
|
|
2536
|
+
1000159 uninverted_intrachromosomal_transposition
|
|
2537
|
+
1000160 unoriented_insertional_duplication
|
|
2538
|
+
1000161 unoriented_interchromosomal_transposition
|
|
2539
|
+
1000162 unoriented_intrachromosomal_transposition
|
|
2540
|
+
1000170 uncharacterized_chromosomal_mutation
|
|
2541
|
+
1000171 deficient_inversion
|
|
2542
|
+
1000173 tandem_duplication
|
|
2543
|
+
1000175 partially_characterized_chromosomal_mutation
|
|
2544
|
+
1000180 sequence_variant_affecting_gene_structure
|
|
2545
|
+
1000181 sequence_variant_causing_gene_fusion
|
|
2546
|
+
1000182 chromosome_number_variation
|
|
2547
|
+
1000183 chromosome_structure_variation
|
|
2548
|
+
1000184 sequence_variant_causes_exon_loss
|
|
2549
|
+
1000185 sequence_variant_causes_intron_gain
|
|
2550
|
+
1000186 sequence_variant_causing_cryptic_splice_donor_activation
|
|
2551
|
+
1001186 sequence_variant_causing_cryptic_splice_acceptor_activation
|
|
2552
|
+
1001187 alternatively_spliced_transcript
|
|
2553
|
+
1001188 encodes_1_polypeptide
|
|
2554
|
+
1001189 encodes_greater_than_1_polypeptide
|
|
2555
|
+
1001190 encodes_different_polypeptides_different_stop
|
|
2556
|
+
1001191 encodes_overlapping_peptides_different_start
|
|
2557
|
+
1001192 encodes_disjoint_polypeptides
|
|
2558
|
+
1001193 encodes_overlapping_polypeptides_different_start_and_stop
|
|
2559
|
+
1001194 alternatively_spliced_gene_encoding_greater_than_1_polypeptide_coding_regions_overlapping
|
|
2560
|
+
1001195 encodes_overlapping_peptides
|
|
2561
|
+
1001196 cryptogene
|
|
2562
|
+
1001197 dicistronic_primary_transcript
|
|
2563
|
+
1001217 member_of_regulon
|
|
2564
|
+
1001244 alternatively_spliced_transcript_encoding_greater_than_1_polypeptide_different_start_codon_different_stop_codon_coding_regions_non_overlapping
|
|
2565
|
+
1001246 CDS_independently_known
|
|
2566
|
+
1001247 orphan_CDS
|
|
2567
|
+
1001249 CDS_supported_by_domain_match_data
|
|
2568
|
+
1001251 CDS_supported_by_sequence_similarity_data
|
|
2569
|
+
1001254 CDS_predicted
|
|
2570
|
+
1001255 status_of_coding_sequence
|
|
2571
|
+
1001259 CDS_supported_by_EST_or_cDNA_data
|
|
2572
|
+
1001260 internal_Shine_Dalgarno_sequence
|
|
2573
|
+
1001261 recoded_mRNA
|
|
2574
|
+
1001262 minus_1_translationally_frameshifted
|
|
2575
|
+
1001263 plus_1_translationally_frameshifted
|
|
2576
|
+
1001264 mRNA_recoded_by_translational_bypass
|
|
2577
|
+
1001265 mRNA_recoded_by_codon_redefinition
|
|
2578
|
+
1001266 stop_codon_redefinition_as_selenocysteine
|
|
2579
|
+
1001267 stop_codon_readthrough
|
|
2580
|
+
1001268 recoding_stimulatory_region
|
|
2581
|
+
1001269 four_bp_start_codon
|
|
2582
|
+
1001270 stop_codon_redefinition_as_pyrrolysine
|
|
2583
|
+
1001271 archaeal_intron
|
|
2584
|
+
1001272 tRNA_intron
|
|
2585
|
+
1001273 CTG_start_codon
|
|
2586
|
+
1001274 SECIS_element
|
|
2587
|
+
1001275 retron
|
|
2588
|
+
1001277 three_prime_recoding_site
|
|
2589
|
+
1001279 three_prime_stem_loop_structure
|
|
2590
|
+
1001280 five_prime_recoding_site
|
|
2591
|
+
1001281 flanking_three_prime_quadruplet_recoding_signal
|
|
2592
|
+
1001282 UAG_stop_codon_signal
|
|
2593
|
+
1001283 UAA_stop_codon_signal
|
|
2594
|
+
1001284 regulon
|
|
2595
|
+
1001285 UGA_stop_codon_signal
|
|
2596
|
+
1001286 three_prime_repeat_recoding_signal
|
|
2597
|
+
1001287 distant_three_prime_recoding_signal
|
|
2598
|
+
1001288 stop_codon_signal
|
|
2599
|
+
2000061 databank_entry
|
|
2600
|
+
3000000 gene_segment
|
|
2601
|
+
00000010002382 5_prime_UTR_uORF_stop_codon_variant
|
|
2602
|
+
00000020002382 5_prime_UTR_uORF_frameshift_variant
|
|
2603
|
+
00000030002382 5_prime_UTR_uORF_stop_codon_gain_variant
|
|
2604
|
+
00000040002382 5_prime_UTR_uORF_stop_codon_loss_variant
|