pynamicalsys 1.4.0__py3-none-any.whl → 1.4.5__py3-none-any.whl

pynamicalsys/__version__.py

@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
 commit_id: COMMIT_ID
 __commit_id__: COMMIT_ID
 
-__version__ = version = '1.4.0'
-__version_tuple__ = version_tuple = (1, 4, 0)
+__version__ = version = '1.4.5'
+__version_tuple__ = version_tuple = (1, 4, 5)
 
 __commit_id__ = commit_id = None

pynamicalsys/continuous_time/chaotic_indicators.py

@@ -657,7 +657,7 @@ def recurrence_time_entropy(
     # Prepare output
     result = [rte]
     if config.return_final_state:
-        result.append(points[-1])
+        result.append(points[-1, 1:])
     if config.return_recmat:
         result.append(recmat)
     if config.return_p:

pynamicalsys/core/hamiltonian_systems.py

@@ -440,14 +440,15 @@ class HamiltonianSystem:
             Value at which the section is taken.
         crossing : {-1, 0, 1}, default=1
             Direction of crossing:
-            -1 : downward
-             0 : all crossings
-             1 : upward
+
+            - -1 : downward
+            - 0 : all crossings
+            - 1 : upward
 
         Returns
         -------
         section_points : ndarray
-            Points of the trajectory lying on the Poincaré section.
+            Points of the trajectory lying on the Poincaré section. The first column is the time of each crossing.
 
         Raises
         ------

pynamicalsys/discrete_time/dynamical_indicators.py

@@ -1122,12 +1122,10 @@ def finite_time_hurst_exponent(
 
     # Compute Hurst exponent for each window
     for i in range(num_windows):
-        result = hurst_exponent(
-            u, parameters, finite_time, mapping, wmin=wmin, return_last=True
-        )
-        H_values[i] = result[: len(u)]
-        phase_space_points[i] = u
-        u = result[len(u) :]
+        time_series = generate_trajectory(u, parameters, finite_time, mapping)
+        H_values[i] = hurst_exponent(time_series, wmin=wmin)
+        phase_space_points[i] = time_series[-1, :]
+        u = time_series[-1, :]
 
     if return_points:
         return H_values, phase_space_points

pynamicalsys/hamiltonian_systems/chaotic_indicators.py

@@ -591,7 +591,7 @@ def recurrence_time_entropy(
     # Prepare output
     result = [rte]
     if config.return_final_state:
-        result.append(points[-1])
+        result.append(points[-1, 1:])
     if config.return_recmat:
         result.append(recmat)
     if config.return_p:

pynamicalsys/hamiltonian_systems/trajectory_analysis.py

@@ -270,11 +270,11 @@ def ensemble_poincare_section(
 
     Returns
     -------
-    section_points : NDArray[np.float64], shape (num_ic, num_intersections, 2*dof)
-        Poincaré section points for each initial condition.
+    section_points : NDArray[np.float64], shape (num_ic, num_intersections, 2*dof + 1)
+        Poincaré section points for each initial condition with the first column being the time at each crossing.
     """
     num_ic, dof = q.shape
-    section_points = np.zeros((num_ic, num_intersections, 2 * dof))
+    section_points = np.zeros((num_ic, num_intersections, 2 * dof + 1))
     for i in prange(num_ic):
         section_points[i] = generate_poincare_section(
             q[i],

{pynamicalsys-1.4.0.dist-info → pynamicalsys-1.4.5.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pynamicalsys
-Version: 1.4.0
+Version: 1.4.5
 Summary: A Python toolkit for the analysis of dynamical systems
 Author-email: Matheus Rolim Sales <rolim.sales.m@gmail.com>
 License:                     GNU GENERAL PUBLIC LICENSE
@@ -677,7 +677,6 @@ License:                     GNU GENERAL PUBLIC LICENSE
         the library.  If this is what you want to do, use the GNU Lesser General
         Public License instead of this License.  But first, please read
         <https://www.gnu.org/licenses/why-not-lgpl.html>.
-Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
 Classifier: Programming Language :: Python :: 3
 Classifier: Programming Language :: Python :: 3.8
 Classifier: Operating System :: OS Independent

{pynamicalsys-1.4.0.dist-info → pynamicalsys-1.4.5.dist-info}/RECORD

@@ -1,12 +1,12 @@
 pynamicalsys/__init__.py,sha256=ioId1lT3XdGTyBeYOFAX8XzppO0tH2HXlshZudYZ6wY,1308
-pynamicalsys/__version__.py,sha256=qX8_mGjWClM0QeMyVAByaVXEA4Pk87fxkFSMEQx9-KM,704
+pynamicalsys/__version__.py,sha256=7G9-bEM2We1bnjZC9ru0QUBgnh6LvXm4YzU-ii-Z34M,704
 pynamicalsys/common/__init__.py,sha256=W4OESm7TA-EUTGUOtIgBgvSd1n80Mgl0KA2dCkw8yIw,721
 pynamicalsys/common/basin_analysis.py,sha256=teGEOMPPOdzKNZsN0_OvkzBlcV-UOANRjcdFyI2-FLM,5473
 pynamicalsys/common/recurrence_quantification_analysis.py,sha256=WQDFwM1aCJJuaATTVNsHzCXode53lzG_PqPoHmBcprs,14344
 pynamicalsys/common/time_series_metrics.py,sha256=A5vJV21knNe3ZSeJWBRMly8Wgx0IRGWVE7yMRPAjbZM,2708
 pynamicalsys/common/utils.py,sha256=KexTurkehh_O7TR38iiBEnUVAAvqGRpwbxVKsqLDA4A,10268
 pynamicalsys/continuous_time/__init__.py,sha256=W4OESm7TA-EUTGUOtIgBgvSd1n80Mgl0KA2dCkw8yIw,721
-pynamicalsys/continuous_time/chaotic_indicators.py,sha256=Srsk8F1jYFcPYUF-QWtH2tEN96T_TORBYVsvbAa61YU,19678
+pynamicalsys/continuous_time/chaotic_indicators.py,sha256=FtHiS6kZStb_OOnWkHLGPsPE7AhUq4HmrAjo-hKCU94,19682
 pynamicalsys/continuous_time/models.py,sha256=doObl0Sd5AwdRKtT-ibvXMa2RJUmQf_Ralt201RcA9s,5879
 pynamicalsys/continuous_time/numerical_integrators.py,sha256=loIzJenp04ZWiukCK3oCs8vn9BeEcxckDO58B7QRKTo,9600
 pynamicalsys/continuous_time/trajectory_analysis.py,sha256=uwWFLMkfDmL-ZSgEfk-5UHMfuCWMQLLXsNhfRS33BjE,17448
@@ -15,22 +15,22 @@ pynamicalsys/core/__init__.py,sha256=W4OESm7TA-EUTGUOtIgBgvSd1n80Mgl0KA2dCkw8yIw
 pynamicalsys/core/basin_metrics.py,sha256=sqSj-UCzBQdRaTvOBtzo8SCgJN90T3GiWy4nlLsbg5c,7604
 pynamicalsys/core/continuous_dynamical_systems.py,sha256=fqcHUgW43cFW-fDm3XWvsdbn0z1DQW2OMq_1zrWmd0A,75107
 pynamicalsys/core/discrete_dynamical_systems.py,sha256=zNTuLkdN28U7iqRkNoYf5QLgre3n8TNGqZz7WxrKOpI,146129
-pynamicalsys/core/hamiltonian_systems.py,sha256=0KT7tg__TwCR6HGDy062U8MZL823eCopwuwj1kUmie4,40668
+pynamicalsys/core/hamiltonian_systems.py,sha256=WkYVs7dzhCacUUagL3iVc3PMEP7YHiCY0tF2wI0Bfdg,40720
 pynamicalsys/core/plot_styler.py,sha256=sVX_rb1HSt340U3zyPlXojylhma9cKCOgYirMIge18M,5647
 pynamicalsys/core/time_series_metrics.py,sha256=_-5iyAR7YBMbcnk9kKkwyyE0D9MiIQ1TizH2JAkt_bQ,7613
 pynamicalsys/discrete_time/__init__.py,sha256=W4OESm7TA-EUTGUOtIgBgvSd1n80Mgl0KA2dCkw8yIw,721
-pynamicalsys/discrete_time/dynamical_indicators.py,sha256=2AgAoOfShVxF5B4d4ZNh3XtIcDenpk19GhD0F_82crQ,48548
+pynamicalsys/discrete_time/dynamical_indicators.py,sha256=QMwJWYALdjLv0-mkCZNmFacCg_WHS2gg9WuBCeyINC0,48548
 pynamicalsys/discrete_time/models.py,sha256=8mw7jrjMLDxKF7qtRyOAIf6zRu7koX43epdzSbqwi1o,10732
 pynamicalsys/discrete_time/trajectory_analysis.py,sha256=z9obMDO62pvUQI1xVikAVo5m6BiyMu7Rmvt3uhKiuYg,48549
 pynamicalsys/discrete_time/transport.py,sha256=CyRiF5ZNLQVUgHbFANH9wIGJuMTOyPRg9Q67_3C8zFM,14417
 pynamicalsys/discrete_time/validators.py,sha256=sk5PuQ6vxNj6ReqIfBTb2iQqlgY0SUkndS56xcp3w_w,10013
 pynamicalsys/hamiltonian_systems/__init__.py,sha256=W4OESm7TA-EUTGUOtIgBgvSd1n80Mgl0KA2dCkw8yIw,721
-pynamicalsys/hamiltonian_systems/chaotic_indicators.py,sha256=MfYbf2iBYk5PRAuBJVp38o2fWs0Fxnb78DExtWoI4Zo,18839
+pynamicalsys/hamiltonian_systems/chaotic_indicators.py,sha256=oekaZLEaLM_DEcy2PLhgD7tPr1pmvO1abrkr2BMdHvQ,18843
 pynamicalsys/hamiltonian_systems/models.py,sha256=l0QWdaQ9xEWNcMXDDl8FiEcqYXQ5E0zbRQPPqfDDrG4,2181
 pynamicalsys/hamiltonian_systems/numerical_integrators.py,sha256=9T_BLJ8BXIydQ_YuqWO04O6jCuRI9koe1Y7_BcioP-I,8725
-pynamicalsys/hamiltonian_systems/trajectory_analysis.py,sha256=ZSZ9Y0mZOZscWLlAvup-8kSw6054bUj4ohJ1M45VxEg,10179
+pynamicalsys/hamiltonian_systems/trajectory_analysis.py,sha256=R_q8ITEJZ_g5VgWynrHlGttYa2j8NH4gQus7_I2MPm0,10241
 pynamicalsys/hamiltonian_systems/validators.py,sha256=qj4lV4E5wte4PHhXPAWuXG71THCCvuv-x_b_N8LTxSM,3832
-pynamicalsys-1.4.0.dist-info/METADATA,sha256=fm3KhDszb0-Gyif3jECFkV-X8fBa44wU-lmBTjjY7F0,47127
-pynamicalsys-1.4.0.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
-pynamicalsys-1.4.0.dist-info/top_level.txt,sha256=1AqoHXye_hGRkvqu4KY0SdEuNTgqf3xyTlV8xhiJJFU,13
-pynamicalsys-1.4.0.dist-info/RECORD,,
+pynamicalsys-1.4.5.dist-info/METADATA,sha256=sr7m3Ugn16YkrDsOloru8h052hWRVs4Af_CzhjusEbw,47040
+pynamicalsys-1.4.5.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
+pynamicalsys-1.4.5.dist-info/top_level.txt,sha256=1AqoHXye_hGRkvqu4KY0SdEuNTgqf3xyTlV8xhiJJFU,13
+pynamicalsys-1.4.5.dist-info/RECORD,,