pymetadata 0.5.4__py3-none-any.whl → 0.5.5__py3-none-any.whl
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- pymetadata/__init__.py +1 -1
- pymetadata/core/annotation.py +110 -52
- pymetadata/identifiers/registry.py +0 -202
- pymetadata/metadata/eco.py +882 -301
- {pymetadata-0.5.4.dist-info → pymetadata-0.5.5.dist-info}/METADATA +7 -7
- {pymetadata-0.5.4.dist-info → pymetadata-0.5.5.dist-info}/RECORD +8 -8
- {pymetadata-0.5.4.dist-info → pymetadata-0.5.5.dist-info}/WHEEL +0 -0
- {pymetadata-0.5.4.dist-info → pymetadata-0.5.5.dist-info}/licenses/LICENSE +0 -0
pymetadata/metadata/eco.py
CHANGED
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@@ -4,7 +4,7 @@ from typing import Union, Optional
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from enum import Enum
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-
ECOType = Union[str,
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ECOType = Union[str, "ECO"]
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_terms = {
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"ECO_0000000": "evidence",
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@@ -593,7 +593,6 @@ _terms = {
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"ECO_0001557": "polyADP-ribosylation assay evidence",
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"ECO_0001558": "protein kinase assay evidence",
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"ECO_0001559": "sumoylation assay evidence",
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"ECO_000156": "single-cell RNA-sequencing evidence used in automatic assertion",
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"ECO_0001560": "single-cell RNA-sequencing evidence",
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"ECO_0001561": "translation assay evidence",
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"ECO_0001562": "ubiquitination assay evidence",
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@@ -1232,6 +1231,7 @@ _terms = {
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"ECO_0006404": "experimentally evolved mutant phenotypic evidence",
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"ECO_0006405": "experimentally evolved mutant phenotypic evidence used in automatic assertion",
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"ECO_0006406": "experimentally evolved mutant phenotypic evidence used in manual assertion",
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"ECO_0006407": "single-cell RNA-sequencing evidence used in automatic assertion",
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"ECO_0007000": "high throughput mutant phenotypic evidence",
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"ECO_0007001": "high throughput mutant phenotypic evidence used in manual assertion",
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"ECO_0007002": "high throughput genetic interaction phenotypic evidence",
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@@ -2629,7 +2629,9 @@ class ECO(str, Enum):
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# automatically integrated combinatorial evidence used in automatic assertion
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ECO_0000053 = "ECO_0000053"
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AUTOMATICALLY_INTEGRATED_COMBINATORIAL_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
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AUTOMATICALLY_INTEGRATED_COMBINATORIAL_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
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"ECO_0000053"
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)
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# double mutant phenotypic evidence
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ECO_0000054 = "ECO_0000054"
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@@ -2917,7 +2919,9 @@ class ECO(str, Enum):
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# in vitro recombinant protein transcription reconstitution assay evidence
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ECO_0000152 = "ECO_0000152"
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-
IN_VITRO_RECOMBINANT_PROTEIN_TRANSCRIPTION_RECONSTITUTION_ASSAY_EVIDENCE =
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IN_VITRO_RECOMBINANT_PROTEIN_TRANSCRIPTION_RECONSTITUTION_ASSAY_EVIDENCE = (
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"ECO_0000152"
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)
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# heterologous protein expression evidence
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ECO_0000154 = "ECO_0000154"
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@@ -3181,11 +3185,15 @@ class ECO(str, Enum):
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# automatically integrated combinatorial evidence used in manual assertion
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ECO_0000245 = "ECO_0000245"
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AUTOMATICALLY_INTEGRATED_COMBINATORIAL_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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AUTOMATICALLY_INTEGRATED_COMBINATORIAL_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000245"
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)
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# obsolete computational combinatorial evidence used in automatic assertion
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ECO_0000246 = "ECO_0000246"
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OBSOLETE_COMPUTATIONAL_COMBINATORIAL_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
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OBSOLETE_COMPUTATIONAL_COMBINATORIAL_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
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"ECO_0000246"
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)
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# sequence alignment evidence used in manual assertion
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ECO_0000247 = "ECO_0000247"
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@@ -3237,7 +3245,9 @@ class ECO(str, Enum):
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# match to InterPro member signature evidence used in automatic assertion
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ECO_0000259 = "ECO_0000259"
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MATCH_TO_INTERPRO_MEMBER_SIGNATURE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
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MATCH_TO_INTERPRO_MEMBER_SIGNATURE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
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"ECO_0000259"
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)
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# match to InterPro member signature evidence used in manual assertion
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ECO_0000260 = "ECO_0000260"
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@@ -3297,7 +3307,9 @@ class ECO(str, Enum):
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# differential methylation hybridization evidence used in manual assertion
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ECO_0000274 = "ECO_0000274"
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DIFFERENTIAL_METHYLATION_HYBRIDIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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DIFFERENTIAL_METHYLATION_HYBRIDIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000274"
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)
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# expression microarray evidence used in manual assertion
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ECO_0000275 = "ECO_0000275"
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@@ -3329,7 +3341,9 @@ class ECO(str, Enum):
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# spatial pattern of protein expression evidence used in manual assertion
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ECO_0000283 = "ECO_0000283"
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SPATIAL_PATTERN_OF_PROTEIN_EXPRESSION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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SPATIAL_PATTERN_OF_PROTEIN_EXPRESSION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000283"
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)
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# protein expression evidence used in manual assertion
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ECO_0000284 = "ECO_0000284"
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@@ -3349,7 +3363,9 @@ class ECO(str, Enum):
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# spatial pattern of transcript expression evidence used in manual assertion
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ECO_0000289 = "ECO_0000289"
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SPATIAL_PATTERN_OF_TRANSCRIPT_EXPRESSION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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SPATIAL_PATTERN_OF_TRANSCRIPT_EXPRESSION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000289"
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)
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# subtractive hybridization evidence used in manual assertion
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ECO_0000290 = "ECO_0000290"
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@@ -3365,7 +3381,9 @@ class ECO(str, Enum):
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# systematic evolution of ligands by exponential amplification evidence
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ECO_0000293 = "ECO_0000293"
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SYSTEMATIC_EVOLUTION_OF_LIGANDS_BY_EXPONENTIAL_AMPLIFICATION_EVIDENCE =
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SYSTEMATIC_EVOLUTION_OF_LIGANDS_BY_EXPONENTIAL_AMPLIFICATION_EVIDENCE = (
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"ECO_0000293"
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)
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# bacterial one-hybrid evidence
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ECO_0000294 = "ECO_0000294"
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@@ -3401,7 +3419,9 @@ class ECO(str, Enum):
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# author statement supported by traceable reference used in manual assertion
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ECO_0000304 = "ECO_0000304"
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AUTHOR_STATEMENT_SUPPORTED_BY_TRACEABLE_REFERENCE_USED_IN_MANUAL_ASSERTION =
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AUTHOR_STATEMENT_SUPPORTED_BY_TRACEABLE_REFERENCE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000304"
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)
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# curator inference used in manual assertion
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ECO_0000305 = "ECO_0000305"
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@@ -3409,7 +3429,9 @@ class ECO(str, Enum):
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# inference from background scientific knowledge used in manual assertion
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ECO_0000306 = "ECO_0000306"
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INFERENCE_FROM_BACKGROUND_SCIENTIFIC_KNOWLEDGE_USED_IN_MANUAL_ASSERTION =
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INFERENCE_FROM_BACKGROUND_SCIENTIFIC_KNOWLEDGE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000306"
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)
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3414
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# no evidence data found used in manual assertion
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ECO_0000307 = "ECO_0000307"
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@@ -3469,7 +3491,9 @@ class ECO(str, Enum):
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# rapid divergence from ancestral sequence evidence used in manual assertion
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ECO_0000321 = "ECO_0000321"
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RAPID_DIVERGENCE_FROM_ANCESTRAL_SEQUENCE_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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RAPID_DIVERGENCE_FROM_ANCESTRAL_SEQUENCE_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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"ECO_0000321"
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)
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3473
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# imported manually asserted information used in automatic assertion
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ECO_0000322 = "ECO_0000322"
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@@ -3477,7 +3501,9 @@ class ECO(str, Enum):
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# imported automatically asserted information used in automatic assertion
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ECO_0000323 = "ECO_0000323"
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3480
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-
IMPORTED_AUTOMATICALLY_ASSERTED_INFORMATION_USED_IN_AUTOMATIC_ASSERTION =
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3504
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IMPORTED_AUTOMATICALLY_ASSERTED_INFORMATION_USED_IN_AUTOMATIC_ASSERTION = (
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"ECO_0000323"
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3506
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)
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3481
3507
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# imaging assay evidence
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ECO_0000324 = "ECO_0000324"
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@@ -3557,11 +3583,15 @@ class ECO(str, Enum):
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# full support of intron positions by RNA-sequencing alignment evidence
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ECO_0000343 = "ECO_0000343"
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3560
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-
FULL_SUPPORT_OF_INTRON_POSITIONS_BY_RNA_SEQUENCING_ALIGNMENT_EVIDENCE =
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3586
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+
FULL_SUPPORT_OF_INTRON_POSITIONS_BY_RNA_SEQUENCING_ALIGNMENT_EVIDENCE = (
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3587
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+
"ECO_0000343"
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3588
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+
)
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3561
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3562
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# partial support of intron positions by RNA-sequencing alignment evidence
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3563
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ECO_0000344 = "ECO_0000344"
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3564
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-
PARTIAL_SUPPORT_OF_INTRON_POSITIONS_BY_RNA_SEQUENCING_ALIGNMENT_EVIDENCE =
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3592
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+
PARTIAL_SUPPORT_OF_INTRON_POSITIONS_BY_RNA_SEQUENCING_ALIGNMENT_EVIDENCE = (
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3593
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+
"ECO_0000344"
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3594
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+
)
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3565
3595
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3566
3596
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# single exon transcript confirmation via alignment evidence
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3567
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ECO_0000345 = "ECO_0000345"
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@@ -4161,7 +4191,9 @@ class ECO(str, Enum):
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4161
4191
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4162
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# terminal deoxynucleotidyl transferase dUTP nick end labeling assay evidence
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4163
4193
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ECO_0001133 = "ECO_0001133"
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4164
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-
TERMINAL_DEOXYNUCLEOTIDYL_TRANSFERASE_DUTP_NICK_END_LABELING_ASSAY_EVIDENCE =
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4194
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+
TERMINAL_DEOXYNUCLEOTIDYL_TRANSFERASE_DUTP_NICK_END_LABELING_ASSAY_EVIDENCE = (
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4195
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+
"ECO_0001133"
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4196
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)
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4165
4197
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|
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4166
4198
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# urine test evidence
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4167
4199
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ECO_0001134 = "ECO_0001134"
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@@ -4209,7 +4241,9 @@ class ECO(str, Enum):
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4209
4241
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4210
4242
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# allograft transplantation phenotypic evidence used in manual assertion
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4211
4243
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ECO_0001146 = "ECO_0001146"
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4212
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-
ALLOGRAFT_TRANSPLANTATION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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4244
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+
ALLOGRAFT_TRANSPLANTATION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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4245
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+
"ECO_0001146"
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4246
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+
)
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4213
4247
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4214
4248
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# anion-exchange chromatography evidence used in manual assertion
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4215
4249
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ECO_0001147 = "ECO_0001147"
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@@ -4245,7 +4279,9 @@ class ECO(str, Enum):
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4245
4279
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4246
4280
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# bromodeoxyuridine incorporation assay evidence used in manual assertion
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4247
4281
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ECO_0001155 = "ECO_0001155"
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4248
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-
BROMODEOXYURIDINE_INCORPORATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
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4282
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+
BROMODEOXYURIDINE_INCORPORATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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4283
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+
"ECO_0001155"
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4284
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+
)
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4249
4285
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|
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4250
4286
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# caspase assay evidence used in manual assertion
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4251
4287
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ECO_0001156 = "ECO_0001156"
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@@ -4265,7 +4301,9 @@ class ECO(str, Enum):
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4265
4301
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4266
4302
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# chemiluminescence-linked immunoassay evidence used in manual assertion
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4267
4303
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ECO_0001160 = "ECO_0001160"
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4268
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-
CHEMILUMINESCENCE_LINKED_IMMUNOASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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4304
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+
CHEMILUMINESCENCE_LINKED_IMMUNOASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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4305
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"ECO_0001160"
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4306
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+
)
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4269
4307
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4270
4308
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# chimeric protein phenotypic evidence used in manual assertion
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4271
4309
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ECO_0001161 = "ECO_0001161"
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@@ -4301,7 +4339,9 @@ class ECO(str, Enum):
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4301
4339
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4302
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# constitutively active mutant protein evidence used in manual assertion
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4303
4341
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ECO_0001169 = "ECO_0001169"
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4304
|
-
CONSTITUTIVELY_ACTIVE_MUTANT_PROTEIN_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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4342
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+
CONSTITUTIVELY_ACTIVE_MUTANT_PROTEIN_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
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4343
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+
"ECO_0001169"
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4344
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+
)
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4305
4345
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4306
4346
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# cross-linking evidence used in manual assertion
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4307
4347
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ECO_0001170 = "ECO_0001170"
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@@ -4321,7 +4361,9 @@ class ECO(str, Enum):
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4321
4361
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4322
4362
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# 4',6-diamidino-2-phenylindole staining evidence used in manual assertion
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4323
4363
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ECO_0001174 = "ECO_0001174"
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4324
|
-
_4__6_DIAMIDINO_2_PHENYLINDOLE_STAINING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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4364
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+
_4__6_DIAMIDINO_2_PHENYLINDOLE_STAINING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
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4365
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+
"ECO_0001174"
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4366
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+
)
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4325
4367
|
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4326
4368
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# deletion mutation phenotypic evidence used in manual assertion
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4327
4369
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ECO_0001175 = "ECO_0001175"
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@@ -4337,7 +4379,9 @@ class ECO(str, Enum):
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4337
4379
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4338
4380
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# dominant-negative mutant phenotypic evidence used in manual assertion
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4339
4381
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ECO_0001179 = "ECO_0001179"
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4340
|
-
DOMINANT_NEGATIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
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4382
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+
DOMINANT_NEGATIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
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4383
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+
"ECO_0001179"
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4384
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+
)
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4341
4385
|
|
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4342
4386
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# eTag assay evidence used in manual assertion
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4343
4387
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ECO_0001180 = "ECO_0001180"
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@@ -4353,7 +4397,9 @@ class ECO(str, Enum):
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4353
4397
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|
|
4354
4398
|
# fluorescence resonance energy transfer evidence used in manual assertion
|
|
4355
4399
|
ECO_0001183 = "ECO_0001183"
|
|
4356
|
-
FLUORESCENCE_RESONANCE_ENERGY_TRANSFER_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4400
|
+
FLUORESCENCE_RESONANCE_ENERGY_TRANSFER_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4401
|
+
"ECO_0001183"
|
|
4402
|
+
)
|
|
4357
4403
|
|
|
4358
4404
|
# gel-filtration evidence used in manual assertion
|
|
4359
4405
|
ECO_0001184 = "ECO_0001184"
|
|
@@ -4425,7 +4471,9 @@ class ECO(str, Enum):
|
|
|
4425
4471
|
|
|
4426
4472
|
# in vitro polyADP-ribosylation assay evidence used in manual assertion
|
|
4427
4473
|
ECO_0001201 = "ECO_0001201"
|
|
4428
|
-
IN_VITRO_POLYADP_RIBOSYLATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4474
|
+
IN_VITRO_POLYADP_RIBOSYLATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4475
|
+
"ECO_0001201"
|
|
4476
|
+
)
|
|
4429
4477
|
|
|
4430
4478
|
# in vitro protein kinase assay evidence used in manual assertion
|
|
4431
4479
|
ECO_0001202 = "ECO_0001202"
|
|
@@ -4585,7 +4633,9 @@ class ECO(str, Enum):
|
|
|
4585
4633
|
|
|
4586
4634
|
# nucleotide analog incorporation assay evidence used in manual assertion
|
|
4587
4635
|
ECO_0001241 = "ECO_0001241"
|
|
4588
|
-
NUCLEOTIDE_ANALOG_INCORPORATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4636
|
+
NUCLEOTIDE_ANALOG_INCORPORATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4637
|
+
"ECO_0001241"
|
|
4638
|
+
)
|
|
4589
4639
|
|
|
4590
4640
|
# phage display evidence used in manual assertion
|
|
4591
4641
|
ECO_0001242 = "ECO_0001242"
|
|
@@ -4657,7 +4707,9 @@ class ECO(str, Enum):
|
|
|
4657
4707
|
|
|
4658
4708
|
# syngeneic transplantation experiment evidence used in manual assertion
|
|
4659
4709
|
ECO_0001259 = "ECO_0001259"
|
|
4660
|
-
SYNGENEIC_TRANSPLANTATION_EXPERIMENT_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4710
|
+
SYNGENEIC_TRANSPLANTATION_EXPERIMENT_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4711
|
+
"ECO_0001259"
|
|
4712
|
+
)
|
|
4661
4713
|
|
|
4662
4714
|
# xenotransplantation phenotypic evidence used in manual assertion
|
|
4663
4715
|
ECO_0001260 = "ECO_0001260"
|
|
@@ -4677,7 +4729,9 @@ class ECO(str, Enum):
|
|
|
4677
4729
|
|
|
4678
4730
|
# tryptic phosphopeptide mapping assay evidence used in manual assertion
|
|
4679
4731
|
ECO_0001265 = "ECO_0001265"
|
|
4680
|
-
TRYPTIC_PHOSPHOPEPTIDE_MAPPING_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4732
|
+
TRYPTIC_PHOSPHOPEPTIDE_MAPPING_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4733
|
+
"ECO_0001265"
|
|
4734
|
+
)
|
|
4681
4735
|
|
|
4682
4736
|
# transgenic organism evidence used in manual assertion
|
|
4683
4737
|
ECO_0001266 = "ECO_0001266"
|
|
@@ -4697,7 +4751,9 @@ class ECO(str, Enum):
|
|
|
4697
4751
|
|
|
4698
4752
|
# restriction landmark genomic scanning evidence used in manual assertion
|
|
4699
4753
|
ECO_0001270 = "ECO_0001270"
|
|
4700
|
-
RESTRICTION_LANDMARK_GENOMIC_SCANNING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4754
|
+
RESTRICTION_LANDMARK_GENOMIC_SCANNING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4755
|
+
"ECO_0001270"
|
|
4756
|
+
)
|
|
4701
4757
|
|
|
4702
4758
|
# resonant mirror biosensor evidence used in manual assertion
|
|
4703
4759
|
ECO_0001271 = "ECO_0001271"
|
|
@@ -4705,7 +4761,9 @@ class ECO(str, Enum):
|
|
|
4705
4761
|
|
|
4706
4762
|
# high-performance liquid chromatography evidence used in manual assertion
|
|
4707
4763
|
ECO_0001272 = "ECO_0001272"
|
|
4708
|
-
HIGH_PERFORMANCE_LIQUID_CHROMATOGRAPHY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
4764
|
+
HIGH_PERFORMANCE_LIQUID_CHROMATOGRAPHY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
4765
|
+
"ECO_0001272"
|
|
4766
|
+
)
|
|
4709
4767
|
|
|
4710
4768
|
# ectopic expression evidence used in manual assertion
|
|
4711
4769
|
ECO_0001273 = "ECO_0001273"
|
|
@@ -4779,10 +4837,6 @@ class ECO(str, Enum):
|
|
|
4779
4837
|
ECO_0001559 = "ECO_0001559"
|
|
4780
4838
|
SUMOYLATION_ASSAY_EVIDENCE = "ECO_0001559"
|
|
4781
4839
|
|
|
4782
|
-
# single-cell RNA-sequencing evidence used in automatic assertion
|
|
4783
|
-
ECO_000156 = "ECO_000156"
|
|
4784
|
-
SINGLE_CELL_RNA_SEQUENCING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = "ECO_000156"
|
|
4785
|
-
|
|
4786
4840
|
# single-cell RNA-sequencing evidence
|
|
4787
4841
|
ECO_0001560 = "ECO_0001560"
|
|
4788
4842
|
SINGLE_CELL_RNA_SEQUENCING_EVIDENCE = "ECO_0001560"
|
|
@@ -4805,7 +4859,9 @@ class ECO(str, Enum):
|
|
|
4805
4859
|
|
|
4806
4860
|
# quantitative reverse transcription polymerase chain reaction evidence
|
|
4807
4861
|
ECO_0001566 = "ECO_0001566"
|
|
4808
|
-
QUANTITATIVE_REVERSE_TRANSCRIPTION_POLYMERASE_CHAIN_REACTION_EVIDENCE =
|
|
4862
|
+
QUANTITATIVE_REVERSE_TRANSCRIPTION_POLYMERASE_CHAIN_REACTION_EVIDENCE = (
|
|
4863
|
+
"ECO_0001566"
|
|
4864
|
+
)
|
|
4809
4865
|
|
|
4810
4866
|
# quantitative reverse transcription polymerase chain reaction evidence used in manual assertion
|
|
4811
4867
|
ECO_0001567 = "ECO_0001567"
|
|
@@ -4961,7 +5017,9 @@ class ECO(str, Enum):
|
|
|
4961
5017
|
|
|
4962
5018
|
# electrophoretic mobility shift assay evidence used in manual assertion
|
|
4963
5019
|
ECO_0001807 = "ECO_0001807"
|
|
4964
|
-
ELECTROPHORETIC_MOBILITY_SHIFT_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5020
|
+
ELECTROPHORETIC_MOBILITY_SHIFT_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5021
|
+
"ECO_0001807"
|
|
5022
|
+
)
|
|
4965
5023
|
|
|
4966
5024
|
# reverse transcription polymerase chain reaction evidence used in manual assertion
|
|
4967
5025
|
ECO_0001808 = "ECO_0001808"
|
|
@@ -4981,7 +5039,9 @@ class ECO(str, Enum):
|
|
|
4981
5039
|
|
|
4982
5040
|
# genomic systematic evolution of ligands by exponential amplification evidence
|
|
4983
5041
|
ECO_0001812 = "ECO_0001812"
|
|
4984
|
-
GENOMIC_SYSTEMATIC_EVOLUTION_OF_LIGANDS_BY_EXPONENTIAL_AMPLIFICATION_EVIDENCE =
|
|
5042
|
+
GENOMIC_SYSTEMATIC_EVOLUTION_OF_LIGANDS_BY_EXPONENTIAL_AMPLIFICATION_EVIDENCE = (
|
|
5043
|
+
"ECO_0001812"
|
|
5044
|
+
)
|
|
4985
5045
|
|
|
4986
5046
|
# heteronuclear single quantum coherence spectroscopy evidence
|
|
4987
5047
|
ECO_0001813 = "ECO_0001813"
|
|
@@ -4989,7 +5049,9 @@ class ECO(str, Enum):
|
|
|
4989
5049
|
|
|
4990
5050
|
# methidiumpropyl-ethylenediaminetetraacetic acid iron (II) footprinting evidence
|
|
4991
5051
|
ECO_0001814 = "ECO_0001814"
|
|
4992
|
-
METHIDIUMPROPYL_ETHYLENEDIAMINETETRAACETIC_ACID_IRON__II__FOOTPRINTING_EVIDENCE =
|
|
5052
|
+
METHIDIUMPROPYL_ETHYLENEDIAMINETETRAACETIC_ACID_IRON__II__FOOTPRINTING_EVIDENCE = (
|
|
5053
|
+
"ECO_0001814"
|
|
5054
|
+
)
|
|
4993
5055
|
|
|
4994
5056
|
# copper-phenanthroline footprinting evidence
|
|
4995
5057
|
ECO_0001815 = "ECO_0001815"
|
|
@@ -5041,7 +5103,9 @@ class ECO(str, Enum):
|
|
|
5041
5103
|
|
|
5042
5104
|
# inference of sequence features from visual inspection used in manual assertion
|
|
5043
5105
|
ECO_0001828 = "ECO_0001828"
|
|
5044
|
-
INFERENCE_OF_SEQUENCE_FEATURES_FROM_VISUAL_INSPECTION_USED_IN_MANUAL_ASSERTION =
|
|
5106
|
+
INFERENCE_OF_SEQUENCE_FEATURES_FROM_VISUAL_INSPECTION_USED_IN_MANUAL_ASSERTION = (
|
|
5107
|
+
"ECO_0001828"
|
|
5108
|
+
)
|
|
5045
5109
|
|
|
5046
5110
|
# ferric uptake regulator titration assay evidence
|
|
5047
5111
|
ECO_0001829 = "ECO_0001829"
|
|
@@ -5089,7 +5153,9 @@ class ECO(str, Enum):
|
|
|
5089
5153
|
|
|
5090
5154
|
# colorimetric in situ hybridization evidence used in automatic assertion
|
|
5091
5155
|
ECO_0001840 = "ECO_0001840"
|
|
5092
|
-
COLORIMETRIC_IN_SITU_HYBRIDIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5156
|
+
COLORIMETRIC_IN_SITU_HYBRIDIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5157
|
+
"ECO_0001840"
|
|
5158
|
+
)
|
|
5093
5159
|
|
|
5094
5160
|
# colorimetric in situ hybridization evidence used in manual assertion
|
|
5095
5161
|
ECO_0001841 = "ECO_0001841"
|
|
@@ -5101,11 +5167,15 @@ class ECO(str, Enum):
|
|
|
5101
5167
|
|
|
5102
5168
|
# random mutagenesis of specific target DNA evidence used in automatic assertion
|
|
5103
5169
|
ECO_0001843 = "ECO_0001843"
|
|
5104
|
-
RANDOM_MUTAGENESIS_OF_SPECIFIC_TARGET_DNA_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5170
|
+
RANDOM_MUTAGENESIS_OF_SPECIFIC_TARGET_DNA_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5171
|
+
"ECO_0001843"
|
|
5172
|
+
)
|
|
5105
5173
|
|
|
5106
5174
|
# random mutagenesis of specific target DNA evidence used in manual assertion
|
|
5107
5175
|
ECO_0001844 = "ECO_0001844"
|
|
5108
|
-
RANDOM_MUTAGENESIS_OF_SPECIFIC_TARGET_DNA_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5176
|
+
RANDOM_MUTAGENESIS_OF_SPECIFIC_TARGET_DNA_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5177
|
+
"ECO_0001844"
|
|
5178
|
+
)
|
|
5109
5179
|
|
|
5110
5180
|
# cell population optical density evidence
|
|
5111
5181
|
ECO_0001845 = "ECO_0001845"
|
|
@@ -5313,7 +5383,9 @@ class ECO(str, Enum):
|
|
|
5313
5383
|
|
|
5314
5384
|
# obsolete computationally derived logical inference used in automatic assertion
|
|
5315
5385
|
ECO_0005539 = "ECO_0005539"
|
|
5316
|
-
OBSOLETE_COMPUTATIONALLY_DERIVED_LOGICAL_INFERENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5386
|
+
OBSOLETE_COMPUTATIONALLY_DERIVED_LOGICAL_INFERENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5387
|
+
"ECO_0005539"
|
|
5388
|
+
)
|
|
5317
5389
|
|
|
5318
5390
|
# obsolete computationally derived logical inference from automatic assertion used in automatic assertion
|
|
5319
5391
|
ECO_0005540 = "ECO_0005540"
|
|
@@ -5337,7 +5409,9 @@ class ECO(str, Enum):
|
|
|
5337
5409
|
|
|
5338
5410
|
# biological system reconstruction evidence based on orthology evidence
|
|
5339
5411
|
ECO_0005545 = "ECO_0005545"
|
|
5340
|
-
BIOLOGICAL_SYSTEM_RECONSTRUCTION_EVIDENCE_BASED_ON_ORTHOLOGY_EVIDENCE =
|
|
5412
|
+
BIOLOGICAL_SYSTEM_RECONSTRUCTION_EVIDENCE_BASED_ON_ORTHOLOGY_EVIDENCE = (
|
|
5413
|
+
"ECO_0005545"
|
|
5414
|
+
)
|
|
5341
5415
|
|
|
5342
5416
|
# biological system reconstruction evidence based on paralogy evidence used in manual assertion
|
|
5343
5417
|
ECO_0005546 = "ECO_0005546"
|
|
@@ -5481,7 +5555,9 @@ class ECO(str, Enum):
|
|
|
5481
5555
|
|
|
5482
5556
|
# enzyme-linked immunoabsorbent assay evidence used in manual assertion
|
|
5483
5557
|
ECO_0005581 = "ECO_0005581"
|
|
5484
|
-
ENZYME_LINKED_IMMUNOABSORBENT_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5558
|
+
ENZYME_LINKED_IMMUNOABSORBENT_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5559
|
+
"ECO_0005581"
|
|
5560
|
+
)
|
|
5485
5561
|
|
|
5486
5562
|
# cell-detached outside-out single-channel recording evidence
|
|
5487
5563
|
ECO_0005582 = "ECO_0005582"
|
|
@@ -5525,7 +5601,9 @@ class ECO(str, Enum):
|
|
|
5525
5601
|
|
|
5526
5602
|
# immunogold labelling electron microscopy assay evidence used in manual assertion
|
|
5527
5603
|
ECO_0005592 = "ECO_0005592"
|
|
5528
|
-
IMMUNOGOLD_LABELLING_ELECTRON_MICROSCOPY_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5604
|
+
IMMUNOGOLD_LABELLING_ELECTRON_MICROSCOPY_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5605
|
+
"ECO_0005592"
|
|
5606
|
+
)
|
|
5529
5607
|
|
|
5530
5608
|
# immunodetection assay evidence
|
|
5531
5609
|
ECO_0005593 = "ECO_0005593"
|
|
@@ -5537,7 +5615,9 @@ class ECO(str, Enum):
|
|
|
5537
5615
|
|
|
5538
5616
|
# immunoperoxidase immunolocalization evidence used in manual assertion
|
|
5539
5617
|
ECO_0005595 = "ECO_0005595"
|
|
5540
|
-
IMMUNOPEROXIDASE_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5618
|
+
IMMUNOPEROXIDASE_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5619
|
+
"ECO_0005595"
|
|
5620
|
+
)
|
|
5541
5621
|
|
|
5542
5622
|
# immunoperoxidase immunolocalization electron microscopy evidence
|
|
5543
5623
|
ECO_0005596 = "ECO_0005596"
|
|
@@ -5561,7 +5641,9 @@ class ECO(str, Enum):
|
|
|
5561
5641
|
|
|
5562
5642
|
# immunofluorescence confocal microscopy evidence used in manual assertion
|
|
5563
5643
|
ECO_0005601 = "ECO_0005601"
|
|
5564
|
-
IMMUNOFLUORESCENCE_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5644
|
+
IMMUNOFLUORESCENCE_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5645
|
+
"ECO_0005601"
|
|
5646
|
+
)
|
|
5565
5647
|
|
|
5566
5648
|
# protein mass spectrometry evidence
|
|
5567
5649
|
ECO_0005603 = "ECO_0005603"
|
|
@@ -5613,11 +5695,15 @@ class ECO(str, Enum):
|
|
|
5613
5695
|
|
|
5614
5696
|
# alkaline phosphatase reporter gene assay evidence used in manual assertion
|
|
5615
5697
|
ECO_0005615 = "ECO_0005615"
|
|
5616
|
-
ALKALINE_PHOSPHATASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5698
|
+
ALKALINE_PHOSPHATASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5699
|
+
"ECO_0005615"
|
|
5700
|
+
)
|
|
5617
5701
|
|
|
5618
5702
|
# beta-galactosidase reporter gene assay evidence used in manual assertion
|
|
5619
5703
|
ECO_0005616 = "ECO_0005616"
|
|
5620
|
-
BETA_GALACTOSIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5704
|
+
BETA_GALACTOSIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5705
|
+
"ECO_0005616"
|
|
5706
|
+
)
|
|
5621
5707
|
|
|
5622
5708
|
# chloramphenicol acetyltransferase reporter gene assay evidence used in manual assertion
|
|
5623
5709
|
ECO_0005617 = "ECO_0005617"
|
|
@@ -5625,11 +5711,15 @@ class ECO(str, Enum):
|
|
|
5625
5711
|
|
|
5626
5712
|
# chromatin immunoprecipitation-chip evidence used in automatic assertion
|
|
5627
5713
|
ECO_0005618 = "ECO_0005618"
|
|
5628
|
-
CHROMATIN_IMMUNOPRECIPITATION_CHIP_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5714
|
+
CHROMATIN_IMMUNOPRECIPITATION_CHIP_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5715
|
+
"ECO_0005618"
|
|
5716
|
+
)
|
|
5629
5717
|
|
|
5630
5718
|
# chromatin immunoprecipitation- exonuclease evidence used in automatic assertion
|
|
5631
5719
|
ECO_0005619 = "ECO_0005619"
|
|
5632
|
-
CHROMATIN_IMMUNOPRECIPITATION__EXONUCLEASE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5720
|
+
CHROMATIN_IMMUNOPRECIPITATION__EXONUCLEASE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5721
|
+
"ECO_0005619"
|
|
5722
|
+
)
|
|
5633
5723
|
|
|
5634
5724
|
# chromatin immunoprecipitation-PCR evidence used in manual assertion
|
|
5635
5725
|
ECO_0005620 = "ECO_0005620"
|
|
@@ -5637,7 +5727,9 @@ class ECO(str, Enum):
|
|
|
5637
5727
|
|
|
5638
5728
|
# chromatin immunoprecipitation-seq evidence used in automatic assertion
|
|
5639
5729
|
ECO_0005621 = "ECO_0005621"
|
|
5640
|
-
CHROMATIN_IMMUNOPRECIPITATION_SEQ_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5730
|
+
CHROMATIN_IMMUNOPRECIPITATION_SEQ_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5731
|
+
"ECO_0005621"
|
|
5732
|
+
)
|
|
5641
5733
|
|
|
5642
5734
|
# comparative genomics motif search evidence used in manual assertion
|
|
5643
5735
|
ECO_0005622 = "ECO_0005622"
|
|
@@ -5645,7 +5737,9 @@ class ECO(str, Enum):
|
|
|
5645
5737
|
|
|
5646
5738
|
# comparative genomics motif search evidence used in automatic assertion
|
|
5647
5739
|
ECO_0005623 = "ECO_0005623"
|
|
5648
|
-
COMPARATIVE_GENOMICS_MOTIF_SEARCH_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5740
|
+
COMPARATIVE_GENOMICS_MOTIF_SEARCH_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5741
|
+
"ECO_0005623"
|
|
5742
|
+
)
|
|
5649
5743
|
|
|
5650
5744
|
# consensus search evidence used in manual assertion
|
|
5651
5745
|
ECO_0005624 = "ECO_0005624"
|
|
@@ -5661,7 +5755,9 @@ class ECO(str, Enum):
|
|
|
5661
5755
|
|
|
5662
5756
|
# DNA adenine methyltransferase identification evidence used in manual assertion
|
|
5663
5757
|
ECO_0005627 = "ECO_0005627"
|
|
5664
|
-
DNA_ADENINE_METHYLTRANSFERASE_IDENTIFICATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5758
|
+
DNA_ADENINE_METHYLTRANSFERASE_IDENTIFICATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5759
|
+
"ECO_0005627"
|
|
5760
|
+
)
|
|
5665
5761
|
|
|
5666
5762
|
# DNA adenine methyltransferase identification evidence used in automatic assertion
|
|
5667
5763
|
ECO_0005628 = "ECO_0005628"
|
|
@@ -5673,7 +5769,9 @@ class ECO(str, Enum):
|
|
|
5673
5769
|
|
|
5674
5770
|
# cDNA to DNA expression microarray evidence used in automatic assertion
|
|
5675
5771
|
ECO_0005630 = "ECO_0005630"
|
|
5676
|
-
CDNA_TO_DNA_EXPRESSION_MICROARRAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5772
|
+
CDNA_TO_DNA_EXPRESSION_MICROARRAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5773
|
+
"ECO_0005630"
|
|
5774
|
+
)
|
|
5677
5775
|
|
|
5678
5776
|
# DNAse footprinting evidence used in manual assertion
|
|
5679
5777
|
ECO_0005631 = "ECO_0005631"
|
|
@@ -5685,7 +5783,9 @@ class ECO(str, Enum):
|
|
|
5685
5783
|
|
|
5686
5784
|
# ferric uptake regulator titration assay evidence used in manual assertion
|
|
5687
5785
|
ECO_0005633 = "ECO_0005633"
|
|
5688
|
-
FERRIC_UPTAKE_REGULATOR_TITRATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5786
|
+
FERRIC_UPTAKE_REGULATOR_TITRATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5787
|
+
"ECO_0005633"
|
|
5788
|
+
)
|
|
5689
5789
|
|
|
5690
5790
|
# genomic systematic evolution of ligands by exponential amplification evidence used in manual assertion
|
|
5691
5791
|
ECO_0005634 = "ECO_0005634"
|
|
@@ -5697,7 +5797,9 @@ class ECO(str, Enum):
|
|
|
5697
5797
|
|
|
5698
5798
|
# green fluorescent protein reporter gene assay evidence used in manual assertion
|
|
5699
5799
|
ECO_0005636 = "ECO_0005636"
|
|
5700
|
-
GREEN_FLUORESCENT_PROTEIN_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5800
|
+
GREEN_FLUORESCENT_PROTEIN_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5801
|
+
"ECO_0005636"
|
|
5802
|
+
)
|
|
5701
5803
|
|
|
5702
5804
|
# green fluorescent protein reporter gene assay evidence used in automatic assertion
|
|
5703
5805
|
ECO_0005637 = "ECO_0005637"
|
|
@@ -5713,11 +5815,15 @@ class ECO(str, Enum):
|
|
|
5713
5815
|
|
|
5714
5816
|
# glutathione S-transferase pull-down assay evidence used in manual assertion
|
|
5715
5817
|
ECO_0005640 = "ECO_0005640"
|
|
5716
|
-
GLUTATHIONE_S_TRANSFERASE_PULL_DOWN_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5818
|
+
GLUTATHIONE_S_TRANSFERASE_PULL_DOWN_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5819
|
+
"ECO_0005640"
|
|
5820
|
+
)
|
|
5717
5821
|
|
|
5718
5822
|
# beta-glucuronidase reporter gene assay evidence used in manual assertion
|
|
5719
5823
|
ECO_0005641 = "ECO_0005641"
|
|
5720
|
-
BETA_GLUCURONIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5824
|
+
BETA_GLUCURONIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5825
|
+
"ECO_0005641"
|
|
5826
|
+
)
|
|
5721
5827
|
|
|
5722
5828
|
# heteronuclear single quantum coherence spectroscopy evidence used in manual assertion
|
|
5723
5829
|
ECO_0005642 = "ECO_0005642"
|
|
@@ -5733,11 +5839,15 @@ class ECO(str, Enum):
|
|
|
5733
5839
|
|
|
5734
5840
|
# interferometric reflectance imaging sensor evidence used in manual assertion
|
|
5735
5841
|
ECO_0005645 = "ECO_0005645"
|
|
5736
|
-
INTERFEROMETRIC_REFLECTANCE_IMAGING_SENSOR_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5842
|
+
INTERFEROMETRIC_REFLECTANCE_IMAGING_SENSOR_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5843
|
+
"ECO_0005645"
|
|
5844
|
+
)
|
|
5737
5845
|
|
|
5738
5846
|
# interferometric reflectance imaging sensor evidence used in automatic assertion
|
|
5739
5847
|
ECO_0005646 = "ECO_0005646"
|
|
5740
|
-
INTERFEROMETRIC_REFLECTANCE_IMAGING_SENSOR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
5848
|
+
INTERFEROMETRIC_REFLECTANCE_IMAGING_SENSOR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
5849
|
+
"ECO_0005646"
|
|
5850
|
+
)
|
|
5741
5851
|
|
|
5742
5852
|
# isothermal titration calorimetry evidence used in manual assertion
|
|
5743
5853
|
ECO_0005647 = "ECO_0005647"
|
|
@@ -5749,7 +5859,9 @@ class ECO(str, Enum):
|
|
|
5749
5859
|
|
|
5750
5860
|
# machine learning prediction of motif instance evidence used in manual assertion
|
|
5751
5861
|
ECO_0005649 = "ECO_0005649"
|
|
5752
|
-
MACHINE_LEARNING_PREDICTION_OF_MOTIF_INSTANCE_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5862
|
+
MACHINE_LEARNING_PREDICTION_OF_MOTIF_INSTANCE_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5863
|
+
"ECO_0005649"
|
|
5864
|
+
)
|
|
5753
5865
|
|
|
5754
5866
|
# machine learning prediction of motif instance evidence used in automatic assertion
|
|
5755
5867
|
ECO_0005650 = "ECO_0005650"
|
|
@@ -5777,7 +5889,9 @@ class ECO(str, Enum):
|
|
|
5777
5889
|
|
|
5778
5890
|
# methylation interference footprinting evidence used in manual assertion
|
|
5779
5891
|
ECO_0005656 = "ECO_0005656"
|
|
5780
|
-
METHYLATION_INTERFERENCE_FOOTPRINTING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5892
|
+
METHYLATION_INTERFERENCE_FOOTPRINTING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5893
|
+
"ECO_0005656"
|
|
5894
|
+
)
|
|
5781
5895
|
|
|
5782
5896
|
# primer extension assay evidence used in manual assertion
|
|
5783
5897
|
ECO_0005657 = "ECO_0005657"
|
|
@@ -5785,7 +5899,9 @@ class ECO(str, Enum):
|
|
|
5785
5899
|
|
|
5786
5900
|
# position-specific scoring matrix motif search evidence used in manual assertion
|
|
5787
5901
|
ECO_0005658 = "ECO_0005658"
|
|
5788
|
-
POSITION_SPECIFIC_SCORING_MATRIX_MOTIF_SEARCH_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5902
|
+
POSITION_SPECIFIC_SCORING_MATRIX_MOTIF_SEARCH_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5903
|
+
"ECO_0005658"
|
|
5904
|
+
)
|
|
5789
5905
|
|
|
5790
5906
|
# position-specific scoring matrix motif search evidence used in automatic assertion
|
|
5791
5907
|
ECO_0005659 = "ECO_0005659"
|
|
@@ -5793,7 +5909,9 @@ class ECO(str, Enum):
|
|
|
5793
5909
|
|
|
5794
5910
|
# quantitative polymerase chain reaction evidence used in manual assertion
|
|
5795
5911
|
ECO_0005660 = "ECO_0005660"
|
|
5796
|
-
QUANTITATIVE_POLYMERASE_CHAIN_REACTION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5912
|
+
QUANTITATIVE_POLYMERASE_CHAIN_REACTION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5913
|
+
"ECO_0005660"
|
|
5914
|
+
)
|
|
5797
5915
|
|
|
5798
5916
|
# rapid amplification of cDNA ends polymerase chain reaction evidence used in manual assertion
|
|
5799
5917
|
ECO_0005661 = "ECO_0005661"
|
|
@@ -5813,7 +5931,9 @@ class ECO(str, Enum):
|
|
|
5813
5931
|
|
|
5814
5932
|
# site-directed mutagenesis phenotypic evidence used in manual assertion
|
|
5815
5933
|
ECO_0005667 = "ECO_0005667"
|
|
5816
|
-
SITE_DIRECTED_MUTAGENESIS_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5934
|
+
SITE_DIRECTED_MUTAGENESIS_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5935
|
+
"ECO_0005667"
|
|
5936
|
+
)
|
|
5817
5937
|
|
|
5818
5938
|
# survival rate analysis evidence used in manual assertion
|
|
5819
5939
|
ECO_0005668 = "ECO_0005668"
|
|
@@ -5841,7 +5961,9 @@ class ECO(str, Enum):
|
|
|
5841
5961
|
|
|
5842
5962
|
# ad-hoc qualitative phenotype observation evidence used in manual assertion
|
|
5843
5963
|
ECO_0005674 = "ECO_0005674"
|
|
5844
|
-
AD_HOC_QUALITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5964
|
+
AD_HOC_QUALITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5965
|
+
"ECO_0005674"
|
|
5966
|
+
)
|
|
5845
5967
|
|
|
5846
5968
|
# ad-hoc quantitative phenotype observation evidence
|
|
5847
5969
|
ECO_0005675 = "ECO_0005675"
|
|
@@ -5849,7 +5971,9 @@ class ECO(str, Enum):
|
|
|
5849
5971
|
|
|
5850
5972
|
# ad-hoc quantitative phenotype observation evidence used in manual assertion
|
|
5851
5973
|
ECO_0005676 = "ECO_0005676"
|
|
5852
|
-
AD_HOC_QUANTITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
5974
|
+
AD_HOC_QUANTITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
5975
|
+
"ECO_0005676"
|
|
5976
|
+
)
|
|
5853
5977
|
|
|
5854
5978
|
# dilution assay evidence
|
|
5855
5979
|
ECO_0005800 = "ECO_0005800"
|
|
@@ -5905,7 +6029,9 @@ class ECO(str, Enum):
|
|
|
5905
6029
|
|
|
5906
6030
|
# chromatin immunoprecipitation- exonuclease evidence used in manual assertion
|
|
5907
6031
|
ECO_0006008 = "ECO_0006008"
|
|
5908
|
-
CHROMATIN_IMMUNOPRECIPITATION__EXONUCLEASE_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6032
|
+
CHROMATIN_IMMUNOPRECIPITATION__EXONUCLEASE_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6033
|
+
"ECO_0006008"
|
|
6034
|
+
)
|
|
5909
6035
|
|
|
5910
6036
|
# chromatin immunoprecipitation-seq evidence used in manual assertion
|
|
5911
6037
|
ECO_0006009 = "ECO_0006009"
|
|
@@ -5949,7 +6075,9 @@ class ECO(str, Enum):
|
|
|
5949
6075
|
|
|
5950
6076
|
# inference based on individual clinical experience used in manual assertion
|
|
5951
6077
|
ECO_0006019 = "ECO_0006019"
|
|
5952
|
-
INFERENCE_BASED_ON_INDIVIDUAL_CLINICAL_EXPERIENCE_USED_IN_MANUAL_ASSERTION =
|
|
6078
|
+
INFERENCE_BASED_ON_INDIVIDUAL_CLINICAL_EXPERIENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6079
|
+
"ECO_0006019"
|
|
6080
|
+
)
|
|
5953
6081
|
|
|
5954
6082
|
# biofilm formation assay evidence
|
|
5955
6083
|
ECO_0006020 = "ECO_0006020"
|
|
@@ -6021,7 +6149,9 @@ class ECO(str, Enum):
|
|
|
6021
6149
|
|
|
6022
6150
|
# genetically encoded fluorescent sensor evidence used in manual assertion
|
|
6023
6151
|
ECO_0006037 = "ECO_0006037"
|
|
6024
|
-
GENETICALLY_ENCODED_FLUORESCENT_SENSOR_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6152
|
+
GENETICALLY_ENCODED_FLUORESCENT_SENSOR_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6153
|
+
"ECO_0006037"
|
|
6154
|
+
)
|
|
6025
6155
|
|
|
6026
6156
|
# genetically encoded fluorescent electrophysiology assay evidence
|
|
6027
6157
|
ECO_0006038 = "ECO_0006038"
|
|
@@ -6033,7 +6163,9 @@ class ECO(str, Enum):
|
|
|
6033
6163
|
|
|
6034
6164
|
# genetically encoded fluorescent ion concentration sensor assay evidence
|
|
6035
6165
|
ECO_0006040 = "ECO_0006040"
|
|
6036
|
-
GENETICALLY_ENCODED_FLUORESCENT_ION_CONCENTRATION_SENSOR_ASSAY_EVIDENCE =
|
|
6166
|
+
GENETICALLY_ENCODED_FLUORESCENT_ION_CONCENTRATION_SENSOR_ASSAY_EVIDENCE = (
|
|
6167
|
+
"ECO_0006040"
|
|
6168
|
+
)
|
|
6037
6169
|
|
|
6038
6170
|
# genetically encoded fluorescent ion concentration sensor assay evidence used in manual assertion
|
|
6039
6171
|
ECO_0006041 = "ECO_0006041"
|
|
@@ -6057,7 +6189,9 @@ class ECO(str, Enum):
|
|
|
6057
6189
|
|
|
6058
6190
|
# single-unit extracellular recording evidence used in manual assertion
|
|
6059
6191
|
ECO_0006046 = "ECO_0006046"
|
|
6060
|
-
SINGLE_UNIT_EXTRACELLULAR_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6192
|
+
SINGLE_UNIT_EXTRACELLULAR_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6193
|
+
"ECO_0006046"
|
|
6194
|
+
)
|
|
6061
6195
|
|
|
6062
6196
|
# field potential recording evidence
|
|
6063
6197
|
ECO_0006047 = "ECO_0006047"
|
|
@@ -6117,7 +6251,9 @@ class ECO(str, Enum):
|
|
|
6117
6251
|
|
|
6118
6252
|
# immunofluorescence wide-field microscopy evidence used in manual assertion
|
|
6119
6253
|
ECO_0006061 = "ECO_0006061"
|
|
6120
|
-
IMMUNOFLUORESCENCE_WIDE_FIELD_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6254
|
+
IMMUNOFLUORESCENCE_WIDE_FIELD_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6255
|
+
"ECO_0006061"
|
|
6256
|
+
)
|
|
6121
6257
|
|
|
6122
6258
|
# wide-field fluorescence microscopy evidence used in manual assertion
|
|
6123
6259
|
ECO_0006062 = "ECO_0006062"
|
|
@@ -6141,7 +6277,9 @@ class ECO(str, Enum):
|
|
|
6141
6277
|
|
|
6142
6278
|
# fluorescence recovery after photobleaching evidence used in manual assertion
|
|
6143
6279
|
ECO_0006067 = "ECO_0006067"
|
|
6144
|
-
FLUORESCENCE_RECOVERY_AFTER_PHOTOBLEACHING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6280
|
+
FLUORESCENCE_RECOVERY_AFTER_PHOTOBLEACHING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6281
|
+
"ECO_0006067"
|
|
6282
|
+
)
|
|
6145
6283
|
|
|
6146
6284
|
# RNA-sequencing evidence used in manual assertion
|
|
6147
6285
|
ECO_0006068 = "ECO_0006068"
|
|
@@ -6157,7 +6295,9 @@ class ECO(str, Enum):
|
|
|
6157
6295
|
|
|
6158
6296
|
# immuno-labelling electron microscopy evidence used in manual assertion
|
|
6159
6297
|
ECO_0006071 = "ECO_0006071"
|
|
6160
|
-
IMMUNO_LABELLING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6298
|
+
IMMUNO_LABELLING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6299
|
+
"ECO_0006071"
|
|
6300
|
+
)
|
|
6161
6301
|
|
|
6162
6302
|
# immunofluorescence super resolution microscopy evidence
|
|
6163
6303
|
ECO_0006072 = "ECO_0006072"
|
|
@@ -6165,7 +6305,9 @@ class ECO(str, Enum):
|
|
|
6165
6305
|
|
|
6166
6306
|
# immunofluorescence super resolution microscopy evidence used in manual assertion
|
|
6167
6307
|
ECO_0006073 = "ECO_0006073"
|
|
6168
|
-
IMMUNOFLUORESCENCE_SUPER_RESOLUTION_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6308
|
+
IMMUNOFLUORESCENCE_SUPER_RESOLUTION_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6309
|
+
"ECO_0006073"
|
|
6310
|
+
)
|
|
6169
6311
|
|
|
6170
6312
|
# co-purification evidence used in manual assertion
|
|
6171
6313
|
ECO_0006074 = "ECO_0006074"
|
|
@@ -6193,7 +6335,9 @@ class ECO(str, Enum):
|
|
|
6193
6335
|
|
|
6194
6336
|
# split-ubiquitin functional complementation evidence used in manual assertion
|
|
6195
6337
|
ECO_0006080 = "ECO_0006080"
|
|
6196
|
-
SPLIT_UBIQUITIN_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6338
|
+
SPLIT_UBIQUITIN_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6339
|
+
"ECO_0006080"
|
|
6340
|
+
)
|
|
6197
6341
|
|
|
6198
6342
|
# far-Western blotting evidence used in manual assertion
|
|
6199
6343
|
ECO_0006081 = "ECO_0006081"
|
|
@@ -6233,7 +6377,9 @@ class ECO(str, Enum):
|
|
|
6233
6377
|
|
|
6234
6378
|
# protein-oligonucleotide microarray binding evidence used in manual assertion
|
|
6235
6379
|
ECO_0006090 = "ECO_0006090"
|
|
6236
|
-
PROTEIN_OLIGONUCLEOTIDE_MICROARRAY_BINDING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6380
|
+
PROTEIN_OLIGONUCLEOTIDE_MICROARRAY_BINDING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6381
|
+
"ECO_0006090"
|
|
6382
|
+
)
|
|
6237
6383
|
|
|
6238
6384
|
# functional complementation evidence used in manual assertion
|
|
6239
6385
|
ECO_0006091 = "ECO_0006091"
|
|
@@ -6249,7 +6395,9 @@ class ECO(str, Enum):
|
|
|
6249
6395
|
|
|
6250
6396
|
# suppressor/enhancer interaction phenotypic evidence used in manual assertion
|
|
6251
6397
|
ECO_0006094 = "ECO_0006094"
|
|
6252
|
-
SUPPRESSOR_ENHANCER_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6398
|
+
SUPPRESSOR_ENHANCER_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6399
|
+
"ECO_0006094"
|
|
6400
|
+
)
|
|
6253
6401
|
|
|
6254
6402
|
# double mutant phenotypic evidence used in manual assertion
|
|
6255
6403
|
ECO_0006095 = "ECO_0006095"
|
|
@@ -6269,7 +6417,9 @@ class ECO(str, Enum):
|
|
|
6269
6417
|
|
|
6270
6418
|
# temperature-sensitive mutant phenotypic evidence used in manual assertion
|
|
6271
6419
|
ECO_0006099 = "ECO_0006099"
|
|
6272
|
-
TEMPERATURE_SENSITIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6420
|
+
TEMPERATURE_SENSITIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6421
|
+
"ECO_0006099"
|
|
6422
|
+
)
|
|
6273
6423
|
|
|
6274
6424
|
# recessive mutant phenotype evidence
|
|
6275
6425
|
ECO_0006100 = "ECO_0006100"
|
|
@@ -6321,11 +6471,15 @@ class ECO(str, Enum):
|
|
|
6321
6471
|
|
|
6322
6472
|
# density functional theory simulation evidence used in manual assertion
|
|
6323
6473
|
ECO_0006145 = "ECO_0006145"
|
|
6324
|
-
DENSITY_FUNCTIONAL_THEORY_SIMULATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6474
|
+
DENSITY_FUNCTIONAL_THEORY_SIMULATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6475
|
+
"ECO_0006145"
|
|
6476
|
+
)
|
|
6325
6477
|
|
|
6326
6478
|
# density functional theory simulation evidence used in automatic assertion
|
|
6327
6479
|
ECO_0006146 = "ECO_0006146"
|
|
6328
|
-
DENSITY_FUNCTIONAL_THEORY_SIMULATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6480
|
+
DENSITY_FUNCTIONAL_THEORY_SIMULATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6481
|
+
"ECO_0006146"
|
|
6482
|
+
)
|
|
6329
6483
|
|
|
6330
6484
|
# documented statement evidence
|
|
6331
6485
|
ECO_0006151 = "ECO_0006151"
|
|
@@ -6353,11 +6507,15 @@ class ECO(str, Enum):
|
|
|
6353
6507
|
|
|
6354
6508
|
# self-reported individual's statement evidence used in manual assertion
|
|
6355
6509
|
ECO_0006157 = "ECO_0006157"
|
|
6356
|
-
SELF_REPORTED_INDIVIDUAL_S_STATEMENT_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6510
|
+
SELF_REPORTED_INDIVIDUAL_S_STATEMENT_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6511
|
+
"ECO_0006157"
|
|
6512
|
+
)
|
|
6357
6513
|
|
|
6358
6514
|
# self-reported individual's statement evidence used in automatic assertion
|
|
6359
6515
|
ECO_0006158 = "ECO_0006158"
|
|
6360
|
-
SELF_REPORTED_INDIVIDUAL_S_STATEMENT_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6516
|
+
SELF_REPORTED_INDIVIDUAL_S_STATEMENT_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6517
|
+
"ECO_0006158"
|
|
6518
|
+
)
|
|
6361
6519
|
|
|
6362
6520
|
# self-reported patient statement evidence used in manual assertion
|
|
6363
6521
|
ECO_0006159 = "ECO_0006159"
|
|
@@ -6381,11 +6539,15 @@ class ECO(str, Enum):
|
|
|
6381
6539
|
|
|
6382
6540
|
# nuclear magnetic resonance spectroscopy evidence used in automatic assertion
|
|
6383
6541
|
ECO_0006164 = "ECO_0006164"
|
|
6384
|
-
NUCLEAR_MAGNETIC_RESONANCE_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6542
|
+
NUCLEAR_MAGNETIC_RESONANCE_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6543
|
+
"ECO_0006164"
|
|
6544
|
+
)
|
|
6385
6545
|
|
|
6386
6546
|
# nuclear magnetic resonance spectroscopy evidence used in manual assertion
|
|
6387
6547
|
ECO_0006165 = "ECO_0006165"
|
|
6388
|
-
NUCLEAR_MAGNETIC_RESONANCE_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6548
|
+
NUCLEAR_MAGNETIC_RESONANCE_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6549
|
+
"ECO_0006165"
|
|
6550
|
+
)
|
|
6389
6551
|
|
|
6390
6552
|
# nuclear magnetic resonance imaging evidence
|
|
6391
6553
|
ECO_0006166 = "ECO_0006166"
|
|
@@ -6393,7 +6555,9 @@ class ECO(str, Enum):
|
|
|
6393
6555
|
|
|
6394
6556
|
# nuclear magnetic resonance imaging evidence used in automatic assertion
|
|
6395
6557
|
ECO_0006167 = "ECO_0006167"
|
|
6396
|
-
NUCLEAR_MAGNETIC_RESONANCE_IMAGING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6558
|
+
NUCLEAR_MAGNETIC_RESONANCE_IMAGING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6559
|
+
"ECO_0006167"
|
|
6560
|
+
)
|
|
6397
6561
|
|
|
6398
6562
|
# nuclear magnetic resonance imaging evidence used in manual assertion
|
|
6399
6563
|
ECO_0006168 = "ECO_0006168"
|
|
@@ -6405,15 +6569,21 @@ class ECO(str, Enum):
|
|
|
6405
6569
|
|
|
6406
6570
|
# quantitative western immunoblotting evidence used in manual assertion
|
|
6407
6571
|
ECO_0006170 = "ECO_0006170"
|
|
6408
|
-
QUANTITATIVE_WESTERN_IMMUNOBLOTTING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6572
|
+
QUANTITATIVE_WESTERN_IMMUNOBLOTTING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6573
|
+
"ECO_0006170"
|
|
6574
|
+
)
|
|
6409
6575
|
|
|
6410
6576
|
# quantitative western immunoblotting evidence used in automatic assertion
|
|
6411
6577
|
ECO_0006171 = "ECO_0006171"
|
|
6412
|
-
QUANTITATIVE_WESTERN_IMMUNOBLOTTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6578
|
+
QUANTITATIVE_WESTERN_IMMUNOBLOTTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6579
|
+
"ECO_0006171"
|
|
6580
|
+
)
|
|
6413
6581
|
|
|
6414
6582
|
# mixed support of intron positions by RNA-sequencing alignment evidence
|
|
6415
6583
|
ECO_0006172 = "ECO_0006172"
|
|
6416
|
-
MIXED_SUPPORT_OF_INTRON_POSITIONS_BY_RNA_SEQUENCING_ALIGNMENT_EVIDENCE =
|
|
6584
|
+
MIXED_SUPPORT_OF_INTRON_POSITIONS_BY_RNA_SEQUENCING_ALIGNMENT_EVIDENCE = (
|
|
6585
|
+
"ECO_0006172"
|
|
6586
|
+
)
|
|
6417
6587
|
|
|
6418
6588
|
# mixed support of intron positions by RNA-sequencing alignment evidence used in automatic assertion
|
|
6419
6589
|
ECO_0006173 = "ECO_0006173"
|
|
@@ -6473,11 +6643,15 @@ class ECO(str, Enum):
|
|
|
6473
6643
|
|
|
6474
6644
|
# X-ray crystallography-based structural model with missing residue coordinates
|
|
6475
6645
|
ECO_0006187 = "ECO_0006187"
|
|
6476
|
-
X_RAY_CRYSTALLOGRAPHY_BASED_STRUCTURAL_MODEL_WITH_MISSING_RESIDUE_COORDINATES =
|
|
6646
|
+
X_RAY_CRYSTALLOGRAPHY_BASED_STRUCTURAL_MODEL_WITH_MISSING_RESIDUE_COORDINATES = (
|
|
6647
|
+
"ECO_0006187"
|
|
6648
|
+
)
|
|
6477
6649
|
|
|
6478
6650
|
# X-ray crystallography-based structural model with high relative B-factor values
|
|
6479
6651
|
ECO_0006188 = "ECO_0006188"
|
|
6480
|
-
X_RAY_CRYSTALLOGRAPHY_BASED_STRUCTURAL_MODEL_WITH_HIGH_RELATIVE_B_FACTOR_VALUES =
|
|
6652
|
+
X_RAY_CRYSTALLOGRAPHY_BASED_STRUCTURAL_MODEL_WITH_HIGH_RELATIVE_B_FACTOR_VALUES = (
|
|
6653
|
+
"ECO_0006188"
|
|
6654
|
+
)
|
|
6481
6655
|
|
|
6482
6656
|
# cryogenic electron microscopy-based structural model with missing residue coordinates
|
|
6483
6657
|
ECO_0006189 = "ECO_0006189"
|
|
@@ -6517,11 +6691,15 @@ class ECO(str, Enum):
|
|
|
6517
6691
|
|
|
6518
6692
|
# proton-based nuclear magnetic resonance evidence used in manual assertion
|
|
6519
6693
|
ECO_0006198 = "ECO_0006198"
|
|
6520
|
-
PROTON_BASED_NUCLEAR_MAGNETIC_RESONANCE_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6694
|
+
PROTON_BASED_NUCLEAR_MAGNETIC_RESONANCE_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6695
|
+
"ECO_0006198"
|
|
6696
|
+
)
|
|
6521
6697
|
|
|
6522
6698
|
# proton-based nuclear magnetic resonance evidence used in automatic assertion
|
|
6523
6699
|
ECO_0006199 = "ECO_0006199"
|
|
6524
|
-
PROTON_BASED_NUCLEAR_MAGNETIC_RESONANCE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6700
|
+
PROTON_BASED_NUCLEAR_MAGNETIC_RESONANCE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6701
|
+
"ECO_0006199"
|
|
6702
|
+
)
|
|
6525
6703
|
|
|
6526
6704
|
# circular dichroism evidence used in manual assertion
|
|
6527
6705
|
ECO_0006200 = "ECO_0006200"
|
|
@@ -6533,11 +6711,15 @@ class ECO(str, Enum):
|
|
|
6533
6711
|
|
|
6534
6712
|
# synchrotron radiation circular dichroism evidence used in manual assertion
|
|
6535
6713
|
ECO_0006202 = "ECO_0006202"
|
|
6536
|
-
SYNCHROTRON_RADIATION_CIRCULAR_DICHROISM_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6714
|
+
SYNCHROTRON_RADIATION_CIRCULAR_DICHROISM_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6715
|
+
"ECO_0006202"
|
|
6716
|
+
)
|
|
6537
6717
|
|
|
6538
6718
|
# synchrotron radiation circular dichroism evidence used in automatic assertion
|
|
6539
6719
|
ECO_0006203 = "ECO_0006203"
|
|
6540
|
-
SYNCHROTRON_RADIATION_CIRCULAR_DICHROISM_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6720
|
+
SYNCHROTRON_RADIATION_CIRCULAR_DICHROISM_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6721
|
+
"ECO_0006203"
|
|
6722
|
+
)
|
|
6541
6723
|
|
|
6542
6724
|
# far-UV circular dichroism evidence used in manual assertion
|
|
6543
6725
|
ECO_0006204 = "ECO_0006204"
|
|
@@ -6637,11 +6819,15 @@ class ECO(str, Enum):
|
|
|
6637
6819
|
|
|
6638
6820
|
# Fourier-transform infrared spectroscopy evidence used in manual assertion
|
|
6639
6821
|
ECO_0006228 = "ECO_0006228"
|
|
6640
|
-
FOURIER_TRANSFORM_INFRARED_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6822
|
+
FOURIER_TRANSFORM_INFRARED_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6823
|
+
"ECO_0006228"
|
|
6824
|
+
)
|
|
6641
6825
|
|
|
6642
6826
|
# Fourier-transform infrared spectroscopy evidence used in automatic assertion
|
|
6643
6827
|
ECO_0006229 = "ECO_0006229"
|
|
6644
|
-
FOURIER_TRANSFORM_INFRARED_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6828
|
+
FOURIER_TRANSFORM_INFRARED_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6829
|
+
"ECO_0006229"
|
|
6830
|
+
)
|
|
6645
6831
|
|
|
6646
6832
|
# heat capacity-based evidence used in manual assertion
|
|
6647
6833
|
ECO_0006230 = "ECO_0006230"
|
|
@@ -6657,7 +6843,9 @@ class ECO(str, Enum):
|
|
|
6657
6843
|
|
|
6658
6844
|
# differential scanning calorimetry evidence used in automatic assertion
|
|
6659
6845
|
ECO_0006233 = "ECO_0006233"
|
|
6660
|
-
DIFFERENTIAL_SCANNING_CALORIMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6846
|
+
DIFFERENTIAL_SCANNING_CALORIMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6847
|
+
"ECO_0006233"
|
|
6848
|
+
)
|
|
6661
6849
|
|
|
6662
6850
|
# selective antibody-based structural conformation evidence used in manual assertion
|
|
6663
6851
|
ECO_0006234 = "ECO_0006234"
|
|
@@ -6693,15 +6881,21 @@ class ECO(str, Enum):
|
|
|
6693
6881
|
|
|
6694
6882
|
# galactokinase reporter gene assay evidence used in automatic assertion
|
|
6695
6883
|
ECO_0006242 = "ECO_0006242"
|
|
6696
|
-
GALACTOKINASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6884
|
+
GALACTOKINASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6885
|
+
"ECO_0006242"
|
|
6886
|
+
)
|
|
6697
6887
|
|
|
6698
6888
|
# polyadenylated transcript 3'-end-sequencing evidence used in manual assertion
|
|
6699
6889
|
ECO_0006243 = "ECO_0006243"
|
|
6700
|
-
POLYADENYLATED_TRANSCRIPT_3__END_SEQUENCING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
6890
|
+
POLYADENYLATED_TRANSCRIPT_3__END_SEQUENCING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
6891
|
+
"ECO_0006243"
|
|
6892
|
+
)
|
|
6701
6893
|
|
|
6702
6894
|
# polyadenylated transcript 3'-end-sequencing evidence used in automatic assertion
|
|
6703
6895
|
ECO_0006244 = "ECO_0006244"
|
|
6704
|
-
POLYADENYLATED_TRANSCRIPT_3__END_SEQUENCING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
6896
|
+
POLYADENYLATED_TRANSCRIPT_3__END_SEQUENCING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
6897
|
+
"ECO_0006244"
|
|
6898
|
+
)
|
|
6705
6899
|
|
|
6706
6900
|
# colony boundary assay evidence used in manual assertion
|
|
6707
6901
|
ECO_0006245 = "ECO_0006245"
|
|
@@ -6741,7 +6935,9 @@ class ECO(str, Enum):
|
|
|
6741
6935
|
|
|
6742
6936
|
# site-directed spin-labelling electron paramagnetic resonance evidence
|
|
6743
6937
|
ECO_0006254 = "ECO_0006254"
|
|
6744
|
-
SITE_DIRECTED_SPIN_LABELLING_ELECTRON_PARAMAGNETIC_RESONANCE_EVIDENCE =
|
|
6938
|
+
SITE_DIRECTED_SPIN_LABELLING_ELECTRON_PARAMAGNETIC_RESONANCE_EVIDENCE = (
|
|
6939
|
+
"ECO_0006254"
|
|
6940
|
+
)
|
|
6745
6941
|
|
|
6746
6942
|
# deglycosylation assay evidence
|
|
6747
6943
|
ECO_0006255 = "ECO_0006255"
|
|
@@ -6849,11 +7045,15 @@ class ECO(str, Enum):
|
|
|
6849
7045
|
|
|
6850
7046
|
# rotary shadowing electron microscopy evidence used in manual assertion
|
|
6851
7047
|
ECO_0006281 = "ECO_0006281"
|
|
6852
|
-
ROTARY_SHADOWING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7048
|
+
ROTARY_SHADOWING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7049
|
+
"ECO_0006281"
|
|
7050
|
+
)
|
|
6853
7051
|
|
|
6854
7052
|
# rotary shadowing electron microscopy evidence used in automatic assertion
|
|
6855
7053
|
ECO_0006282 = "ECO_0006282"
|
|
6856
|
-
ROTARY_SHADOWING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7054
|
+
ROTARY_SHADOWING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7055
|
+
"ECO_0006282"
|
|
7056
|
+
)
|
|
6857
7057
|
|
|
6858
7058
|
# electrospray ionization fourier transform ion cyclotron resonance mass spectrometry evidence used in manual assertion
|
|
6859
7059
|
ECO_0006283 = "ECO_0006283"
|
|
@@ -6897,15 +7097,21 @@ class ECO(str, Enum):
|
|
|
6897
7097
|
|
|
6898
7098
|
# protein fragment functional complementation evidence used in manual assertion
|
|
6899
7099
|
ECO_0006293 = "ECO_0006293"
|
|
6900
|
-
PROTEIN_FRAGMENT_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7100
|
+
PROTEIN_FRAGMENT_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7101
|
+
"ECO_0006293"
|
|
7102
|
+
)
|
|
6901
7103
|
|
|
6902
7104
|
# protein fragment functional complementation evidence used in automatic assertion
|
|
6903
7105
|
ECO_0006294 = "ECO_0006294"
|
|
6904
|
-
PROTEIN_FRAGMENT_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7106
|
+
PROTEIN_FRAGMENT_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7107
|
+
"ECO_0006294"
|
|
7108
|
+
)
|
|
6905
7109
|
|
|
6906
7110
|
# beta galactosidase functional complementation evidence used in manual assertion
|
|
6907
7111
|
ECO_0006295 = "ECO_0006295"
|
|
6908
|
-
BETA_GALACTOSIDASE_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7112
|
+
BETA_GALACTOSIDASE_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7113
|
+
"ECO_0006295"
|
|
7114
|
+
)
|
|
6909
7115
|
|
|
6910
7116
|
# beta galactosidase functional complementation evidence used in automatic assertion
|
|
6911
7117
|
ECO_0006296 = "ECO_0006296"
|
|
@@ -6913,11 +7119,15 @@ class ECO(str, Enum):
|
|
|
6913
7119
|
|
|
6914
7120
|
# GAL4-VP16 functional complementation evidence used in manual assertion
|
|
6915
7121
|
ECO_0006297 = "ECO_0006297"
|
|
6916
|
-
GAL4_VP16_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7122
|
+
GAL4_VP16_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7123
|
+
"ECO_0006297"
|
|
7124
|
+
)
|
|
6917
7125
|
|
|
6918
7126
|
# GAL4-VP16 functional complementation evidence used in automatic assertion
|
|
6919
7127
|
ECO_0006298 = "ECO_0006298"
|
|
6920
|
-
GAL4_VP16_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7128
|
+
GAL4_VP16_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7129
|
+
"ECO_0006298"
|
|
7130
|
+
)
|
|
6921
7131
|
|
|
6922
7132
|
# Raman spectroscopy evidence used in manual assertion
|
|
6923
7133
|
ECO_0006299 = "ECO_0006299"
|
|
@@ -6949,7 +7159,9 @@ class ECO(str, Enum):
|
|
|
6949
7159
|
|
|
6950
7160
|
# native protein gel electrophoresis evidence used in automatic assertion
|
|
6951
7161
|
ECO_0006306 = "ECO_0006306"
|
|
6952
|
-
NATIVE_PROTEIN_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7162
|
+
NATIVE_PROTEIN_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7163
|
+
"ECO_0006306"
|
|
7164
|
+
)
|
|
6953
7165
|
|
|
6954
7166
|
# turbidity measurement evidence used in manual assertion
|
|
6955
7167
|
ECO_0006307 = "ECO_0006307"
|
|
@@ -6993,11 +7205,15 @@ class ECO(str, Enum):
|
|
|
6993
7205
|
|
|
6994
7206
|
# temperature-induced protein unfolding evidence used in manual assertion
|
|
6995
7207
|
ECO_0006317 = "ECO_0006317"
|
|
6996
|
-
TEMPERATURE_INDUCED_PROTEIN_UNFOLDING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7208
|
+
TEMPERATURE_INDUCED_PROTEIN_UNFOLDING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7209
|
+
"ECO_0006317"
|
|
7210
|
+
)
|
|
6997
7211
|
|
|
6998
7212
|
# temperature-induced protein unfolding evidence used in automatic assertion
|
|
6999
7213
|
ECO_0006318 = "ECO_0006318"
|
|
7000
|
-
TEMPERATURE_INDUCED_PROTEIN_UNFOLDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7214
|
+
TEMPERATURE_INDUCED_PROTEIN_UNFOLDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7215
|
+
"ECO_0006318"
|
|
7216
|
+
)
|
|
7001
7217
|
|
|
7002
7218
|
# cell aggregation evidence used in manual assertion
|
|
7003
7219
|
ECO_0006319 = "ECO_0006319"
|
|
@@ -7149,7 +7365,9 @@ class ECO(str, Enum):
|
|
|
7149
7365
|
|
|
7150
7366
|
# thioflavin T based fluorescence spectroscopy evidence used in manual assertion
|
|
7151
7367
|
ECO_0006356 = "ECO_0006356"
|
|
7152
|
-
THIOFLAVIN_T_BASED_FLUORESCENCE_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7368
|
+
THIOFLAVIN_T_BASED_FLUORESCENCE_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7369
|
+
"ECO_0006356"
|
|
7370
|
+
)
|
|
7153
7371
|
|
|
7154
7372
|
# thioflavin T based fluorescence spectroscopy evidence used in automatic assertion
|
|
7155
7373
|
ECO_0006357 = "ECO_0006357"
|
|
@@ -7161,15 +7379,21 @@ class ECO(str, Enum):
|
|
|
7161
7379
|
|
|
7162
7380
|
# differential scanning fluorimetry evidence used in automatic assertion
|
|
7163
7381
|
ECO_0006359 = "ECO_0006359"
|
|
7164
|
-
DIFFERENTIAL_SCANNING_FLUORIMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7382
|
+
DIFFERENTIAL_SCANNING_FLUORIMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7383
|
+
"ECO_0006359"
|
|
7384
|
+
)
|
|
7165
7385
|
|
|
7166
7386
|
# fluorescence correlation spectroscopy evidence used in manual assertion
|
|
7167
7387
|
ECO_0006360 = "ECO_0006360"
|
|
7168
|
-
FLUORESCENCE_CORRELATION_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7388
|
+
FLUORESCENCE_CORRELATION_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7389
|
+
"ECO_0006360"
|
|
7390
|
+
)
|
|
7169
7391
|
|
|
7170
7392
|
# fluorescence correlation spectroscopy evidence used in automatic assertion
|
|
7171
7393
|
ECO_0006361 = "ECO_0006361"
|
|
7172
|
-
FLUORESCENCE_CORRELATION_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7394
|
+
FLUORESCENCE_CORRELATION_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7395
|
+
"ECO_0006361"
|
|
7396
|
+
)
|
|
7173
7397
|
|
|
7174
7398
|
# intrinsic fluorescence-based protein conformation evidence used in manual assertion
|
|
7175
7399
|
ECO_0006362 = "ECO_0006362"
|
|
@@ -7181,11 +7405,15 @@ class ECO(str, Enum):
|
|
|
7181
7405
|
|
|
7182
7406
|
# stopped-flow fluorescence spectroscopy evidence used in manual assertion
|
|
7183
7407
|
ECO_0006364 = "ECO_0006364"
|
|
7184
|
-
STOPPED_FLOW_FLUORESCENCE_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7408
|
+
STOPPED_FLOW_FLUORESCENCE_SPECTROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7409
|
+
"ECO_0006364"
|
|
7410
|
+
)
|
|
7185
7411
|
|
|
7186
7412
|
# stopped-flow fluorescence spectroscopy evidence used in automatic assertion
|
|
7187
7413
|
ECO_0006365 = "ECO_0006365"
|
|
7188
|
-
STOPPED_FLOW_FLUORESCENCE_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7414
|
+
STOPPED_FLOW_FLUORESCENCE_SPECTROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7415
|
+
"ECO_0006365"
|
|
7416
|
+
)
|
|
7189
7417
|
|
|
7190
7418
|
# temperature jump relaxation evidence used in manual assertion
|
|
7191
7419
|
ECO_0006366 = "ECO_0006366"
|
|
@@ -7201,7 +7429,9 @@ class ECO(str, Enum):
|
|
|
7201
7429
|
|
|
7202
7430
|
# computational structure modeling evidence used in automatic assertion
|
|
7203
7431
|
ECO_0006369 = "ECO_0006369"
|
|
7204
|
-
COMPUTATIONAL_STRUCTURE_MODELING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7432
|
+
COMPUTATIONAL_STRUCTURE_MODELING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7433
|
+
"ECO_0006369"
|
|
7434
|
+
)
|
|
7205
7435
|
|
|
7206
7436
|
# structural ensemble generation evidence used in manual assertion
|
|
7207
7437
|
ECO_0006370 = "ECO_0006370"
|
|
@@ -7265,7 +7495,9 @@ class ECO(str, Enum):
|
|
|
7265
7495
|
|
|
7266
7496
|
# host-surrogate penetration assay evidence used in automatic assertion
|
|
7267
7497
|
ECO_0006385 = "ECO_0006385"
|
|
7268
|
-
HOST_SURROGATE_PENETRATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7498
|
+
HOST_SURROGATE_PENETRATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7499
|
+
"ECO_0006385"
|
|
7500
|
+
)
|
|
7269
7501
|
|
|
7270
7502
|
# host penetration assay evidence used in manual assertion
|
|
7271
7503
|
ECO_0006386 = "ECO_0006386"
|
|
@@ -7281,7 +7513,9 @@ class ECO(str, Enum):
|
|
|
7281
7513
|
|
|
7282
7514
|
# iodine-125-labeled ligand binding evidence used in automatic assertion
|
|
7283
7515
|
ECO_0006389 = "ECO_0006389"
|
|
7284
|
-
IODINE_125_LABELED_LIGAND_BINDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7516
|
+
IODINE_125_LABELED_LIGAND_BINDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7517
|
+
"ECO_0006389"
|
|
7518
|
+
)
|
|
7285
7519
|
|
|
7286
7520
|
# bio-layer interferometry evidence used in manual assertion
|
|
7287
7521
|
ECO_0006390 = "ECO_0006390"
|
|
@@ -7329,11 +7563,19 @@ class ECO(str, Enum):
|
|
|
7329
7563
|
|
|
7330
7564
|
# experimentally evolved mutant phenotypic evidence used in automatic assertion
|
|
7331
7565
|
ECO_0006405 = "ECO_0006405"
|
|
7332
|
-
EXPERIMENTALLY_EVOLVED_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
7566
|
+
EXPERIMENTALLY_EVOLVED_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
7567
|
+
"ECO_0006405"
|
|
7568
|
+
)
|
|
7333
7569
|
|
|
7334
7570
|
# experimentally evolved mutant phenotypic evidence used in manual assertion
|
|
7335
7571
|
ECO_0006406 = "ECO_0006406"
|
|
7336
|
-
EXPERIMENTALLY_EVOLVED_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7572
|
+
EXPERIMENTALLY_EVOLVED_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7573
|
+
"ECO_0006406"
|
|
7574
|
+
)
|
|
7575
|
+
|
|
7576
|
+
# single-cell RNA-sequencing evidence used in automatic assertion
|
|
7577
|
+
ECO_0006407 = "ECO_0006407"
|
|
7578
|
+
SINGLE_CELL_RNA_SEQUENCING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = "ECO_0006407"
|
|
7337
7579
|
|
|
7338
7580
|
# high throughput mutant phenotypic evidence
|
|
7339
7581
|
ECO_0007000 = "ECO_0007000"
|
|
@@ -7349,7 +7591,9 @@ class ECO(str, Enum):
|
|
|
7349
7591
|
|
|
7350
7592
|
# high throughput genetic interaction phenotypic evidence used in manual assertion
|
|
7351
7593
|
ECO_0007003 = "ECO_0007003"
|
|
7352
|
-
HIGH_THROUGHPUT_GENETIC_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7594
|
+
HIGH_THROUGHPUT_GENETIC_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7595
|
+
"ECO_0007003"
|
|
7596
|
+
)
|
|
7353
7597
|
|
|
7354
7598
|
# high throughput direct assay evidence
|
|
7355
7599
|
ECO_0007004 = "ECO_0007004"
|
|
@@ -7453,7 +7697,9 @@ class ECO(str, Enum):
|
|
|
7453
7697
|
|
|
7454
7698
|
# viral hemagglutination inhibition assay evidence used in manual assertion
|
|
7455
7699
|
ECO_0007030 = "ECO_0007030"
|
|
7456
|
-
VIRAL_HEMAGGLUTINATION_INHIBITION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7700
|
+
VIRAL_HEMAGGLUTINATION_INHIBITION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7701
|
+
"ECO_0007030"
|
|
7702
|
+
)
|
|
7457
7703
|
|
|
7458
7704
|
# compement fixation assay evidence
|
|
7459
7705
|
ECO_0007031 = "ECO_0007031"
|
|
@@ -7541,7 +7787,9 @@ class ECO(str, Enum):
|
|
|
7541
7787
|
|
|
7542
7788
|
# transmitted light brightfied mircoscopy evidence used in manual assertion
|
|
7543
7789
|
ECO_0007052 = "ECO_0007052"
|
|
7544
|
-
TRANSMITTED_LIGHT_BRIGHTFIED_MIRCOSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7790
|
+
TRANSMITTED_LIGHT_BRIGHTFIED_MIRCOSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7791
|
+
"ECO_0007052"
|
|
7792
|
+
)
|
|
7545
7793
|
|
|
7546
7794
|
# koehler illumination microscopy evidence
|
|
7547
7795
|
ECO_0007053 = "ECO_0007053"
|
|
@@ -7557,7 +7805,9 @@ class ECO(str, Enum):
|
|
|
7557
7805
|
|
|
7558
7806
|
# differential interference contrast microscopy evidence used in manual assertion
|
|
7559
7807
|
ECO_0007056 = "ECO_0007056"
|
|
7560
|
-
DIFFERENTIAL_INTERFERENCE_CONTRAST_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7808
|
+
DIFFERENTIAL_INTERFERENCE_CONTRAST_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7809
|
+
"ECO_0007056"
|
|
7810
|
+
)
|
|
7561
7811
|
|
|
7562
7812
|
# extended field laser confocal microscopy evidence
|
|
7563
7813
|
ECO_0007057 = "ECO_0007057"
|
|
@@ -7565,7 +7815,9 @@ class ECO(str, Enum):
|
|
|
7565
7815
|
|
|
7566
7816
|
# extended field laser confocal microscopy evidence used in manual assertion
|
|
7567
7817
|
ECO_0007058 = "ECO_0007058"
|
|
7568
|
-
EXTENDED_FIELD_LASER_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7818
|
+
EXTENDED_FIELD_LASER_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7819
|
+
"ECO_0007058"
|
|
7820
|
+
)
|
|
7569
7821
|
|
|
7570
7822
|
# confocal laser scanning microscopy evidence
|
|
7571
7823
|
ECO_0007059 = "ECO_0007059"
|
|
@@ -7605,7 +7857,9 @@ class ECO(str, Enum):
|
|
|
7605
7857
|
|
|
7606
7858
|
# colony papillation assay phenotypic evidence used in manual assertion
|
|
7607
7859
|
ECO_0007068 = "ECO_0007068"
|
|
7608
|
-
COLONY_PAPILLATION_ASSAY_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7860
|
+
COLONY_PAPILLATION_ASSAY_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7861
|
+
"ECO_0007068"
|
|
7862
|
+
)
|
|
7609
7863
|
|
|
7610
7864
|
# crystal violet staining evidence
|
|
7611
7865
|
ECO_0007069 = "ECO_0007069"
|
|
@@ -7701,7 +7955,9 @@ class ECO(str, Enum):
|
|
|
7701
7955
|
|
|
7702
7956
|
# voucher specimen phenotypic analysis evidence used in manual assertion
|
|
7703
7957
|
ECO_0007093 = "ECO_0007093"
|
|
7704
|
-
VOUCHER_SPECIMEN_PHENOTYPIC_ANALYSIS_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7958
|
+
VOUCHER_SPECIMEN_PHENOTYPIC_ANALYSIS_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7959
|
+
"ECO_0007093"
|
|
7960
|
+
)
|
|
7705
7961
|
|
|
7706
7962
|
# positional similarity evidence used in manual assertion
|
|
7707
7963
|
ECO_0007094 = "ECO_0007094"
|
|
@@ -7729,7 +7985,9 @@ class ECO(str, Enum):
|
|
|
7729
7985
|
|
|
7730
7986
|
# methylation-specific polymerase chain reaction evidence used in manual assertion
|
|
7731
7987
|
ECO_0007100 = "ECO_0007100"
|
|
7732
|
-
METHYLATION_SPECIFIC_POLYMERASE_CHAIN_REACTION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
7988
|
+
METHYLATION_SPECIFIC_POLYMERASE_CHAIN_REACTION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
7989
|
+
"ECO_0007100"
|
|
7990
|
+
)
|
|
7733
7991
|
|
|
7734
7992
|
# southern hybridization evidence used in manual assertion
|
|
7735
7993
|
ECO_0007101 = "ECO_0007101"
|
|
@@ -7741,7 +7999,9 @@ class ECO(str, Enum):
|
|
|
7741
7999
|
|
|
7742
8000
|
# epitope-tagged protein immunolocalization evidence used in manual assertion
|
|
7743
8001
|
ECO_0007103 = "ECO_0007103"
|
|
7744
|
-
EPITOPE_TAGGED_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8002
|
+
EPITOPE_TAGGED_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8003
|
+
"ECO_0007103"
|
|
8004
|
+
)
|
|
7745
8005
|
|
|
7746
8006
|
# co-fractionation evidence used in manual assertion
|
|
7747
8007
|
ECO_0007104 = "ECO_0007104"
|
|
@@ -7757,11 +8017,15 @@ class ECO(str, Enum):
|
|
|
7757
8017
|
|
|
7758
8018
|
# beta-glucuronidase fusion protein localization evidence used in manual assertion
|
|
7759
8019
|
ECO_0007108 = "ECO_0007108"
|
|
7760
|
-
BETA_GLUCURONIDASE_FUSION_PROTEIN_LOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8020
|
+
BETA_GLUCURONIDASE_FUSION_PROTEIN_LOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8021
|
+
"ECO_0007108"
|
|
8022
|
+
)
|
|
7761
8023
|
|
|
7762
8024
|
# beta-galactosidase fusion protein localization evidence used in manual assertion
|
|
7763
8025
|
ECO_0007109 = "ECO_0007109"
|
|
7764
|
-
BETA_GALACTOSIDASE_FUSION_PROTEIN_LOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8026
|
+
BETA_GALACTOSIDASE_FUSION_PROTEIN_LOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8027
|
+
"ECO_0007109"
|
|
8028
|
+
)
|
|
7765
8029
|
|
|
7766
8030
|
# thin layer chromatography evidence used in manual assertion
|
|
7767
8031
|
ECO_0007110 = "ECO_0007110"
|
|
@@ -7785,7 +8049,9 @@ class ECO(str, Enum):
|
|
|
7785
8049
|
|
|
7786
8050
|
# two-electrode voltage clamp recording evidence used in manual assertion
|
|
7787
8051
|
ECO_0007115 = "ECO_0007115"
|
|
7788
|
-
TWO_ELECTRODE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8052
|
+
TWO_ELECTRODE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8053
|
+
"ECO_0007115"
|
|
8054
|
+
)
|
|
7789
8055
|
|
|
7790
8056
|
# biochemical trait analysis evidence used in manual assertion
|
|
7791
8057
|
ECO_0007116 = "ECO_0007116"
|
|
@@ -7861,7 +8127,9 @@ class ECO(str, Enum):
|
|
|
7861
8127
|
|
|
7862
8128
|
# environmental perturbation phenotypic evidence used in manual assertion
|
|
7863
8129
|
ECO_0007136 = "ECO_0007136"
|
|
7864
|
-
ENVIRONMENTAL_PERTURBATION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8130
|
+
ENVIRONMENTAL_PERTURBATION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8131
|
+
"ECO_0007136"
|
|
8132
|
+
)
|
|
7865
8133
|
|
|
7866
8134
|
# tissue ablation phenotypic evidence used in manual assertion
|
|
7867
8135
|
ECO_0007137 = "ECO_0007137"
|
|
@@ -7877,11 +8145,15 @@ class ECO(str, Enum):
|
|
|
7877
8145
|
|
|
7878
8146
|
# green fluorescent protein immunolocalization evidence used in manual assertion
|
|
7879
8147
|
ECO_0007142 = "ECO_0007142"
|
|
7880
|
-
GREEN_FLUORESCENT_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8148
|
+
GREEN_FLUORESCENT_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8149
|
+
"ECO_0007142"
|
|
8150
|
+
)
|
|
7881
8151
|
|
|
7882
8152
|
# beta-galactosidase protein immunolocalization evidence used in manual assertion
|
|
7883
8153
|
ECO_0007143 = "ECO_0007143"
|
|
7884
|
-
BETA_GALACTOSIDASE_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8154
|
+
BETA_GALACTOSIDASE_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8155
|
+
"ECO_0007143"
|
|
8156
|
+
)
|
|
7885
8157
|
|
|
7886
8158
|
# cap analysis of gene expression evidence used in manual assertion
|
|
7887
8159
|
ECO_0007144 = "ECO_0007144"
|
|
@@ -7889,7 +8161,9 @@ class ECO(str, Enum):
|
|
|
7889
8161
|
|
|
7890
8162
|
# nano-cap analysis of gene expression evidence used in manual assertion
|
|
7891
8163
|
ECO_0007145 = "ECO_0007145"
|
|
7892
|
-
NANO_CAP_ANALYSIS_OF_GENE_EXPRESSION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8164
|
+
NANO_CAP_ANALYSIS_OF_GENE_EXPRESSION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8165
|
+
"ECO_0007145"
|
|
8166
|
+
)
|
|
7893
8167
|
|
|
7894
8168
|
# particle size and count assay evidence used in manual assertion
|
|
7895
8169
|
ECO_0007146 = "ECO_0007146"
|
|
@@ -7905,7 +8179,9 @@ class ECO(str, Enum):
|
|
|
7905
8179
|
|
|
7906
8180
|
# two-dimensional agarose gel electrophoresis evidence used in manual assertion
|
|
7907
8181
|
ECO_0007149 = "ECO_0007149"
|
|
7908
|
-
TWO_DIMENSIONAL_AGAROSE_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8182
|
+
TWO_DIMENSIONAL_AGAROSE_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8183
|
+
"ECO_0007149"
|
|
8184
|
+
)
|
|
7909
8185
|
|
|
7910
8186
|
# plasmid maintenance assay evidence used in manual assertion
|
|
7911
8187
|
ECO_0007150 = "ECO_0007150"
|
|
@@ -7913,7 +8189,9 @@ class ECO(str, Enum):
|
|
|
7913
8189
|
|
|
7914
8190
|
# specific protein inhibition by antibody evidence used in manual assertion
|
|
7915
8191
|
ECO_0007151 = "ECO_0007151"
|
|
7916
|
-
SPECIFIC_PROTEIN_INHIBITION_BY_ANTIBODY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8192
|
+
SPECIFIC_PROTEIN_INHIBITION_BY_ANTIBODY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8193
|
+
"ECO_0007151"
|
|
8194
|
+
)
|
|
7917
8195
|
|
|
7918
8196
|
# single exon transcript confirmation via alignment evidence used in manual assertion
|
|
7919
8197
|
ECO_0007152 = "ECO_0007152"
|
|
@@ -7933,7 +8211,9 @@ class ECO(str, Enum):
|
|
|
7933
8211
|
|
|
7934
8212
|
# biological target-disease association via drug evidence used in manual assertion
|
|
7935
8213
|
ECO_0007156 = "ECO_0007156"
|
|
7936
|
-
BIOLOGICAL_TARGET_DISEASE_ASSOCIATION_VIA_DRUG_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8214
|
+
BIOLOGICAL_TARGET_DISEASE_ASSOCIATION_VIA_DRUG_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8215
|
+
"ECO_0007156"
|
|
8216
|
+
)
|
|
7937
8217
|
|
|
7938
8218
|
# cell staining evidence used in manual assertion
|
|
7939
8219
|
ECO_0007157 = "ECO_0007157"
|
|
@@ -7941,7 +8221,9 @@ class ECO(str, Enum):
|
|
|
7941
8221
|
|
|
7942
8222
|
# obsolete visual sequence inspection evidence used in manual assertion
|
|
7943
8223
|
ECO_0007158 = "ECO_0007158"
|
|
7944
|
-
OBSOLETE_VISUAL_SEQUENCE_INSPECTION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8224
|
+
OBSOLETE_VISUAL_SEQUENCE_INSPECTION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8225
|
+
"ECO_0007158"
|
|
8226
|
+
)
|
|
7945
8227
|
|
|
7946
8228
|
# ATP bioluminescence assay evidence used in manual assertion
|
|
7947
8229
|
ECO_0007159 = "ECO_0007159"
|
|
@@ -7973,7 +8255,9 @@ class ECO(str, Enum):
|
|
|
7973
8255
|
|
|
7974
8256
|
# repeat expansion mutation phenotypic evidence used in manual assertion
|
|
7975
8257
|
ECO_0007166 = "ECO_0007166"
|
|
7976
|
-
REPEAT_EXPANSION_MUTATION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8258
|
+
REPEAT_EXPANSION_MUTATION_PHENOTYPIC_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8259
|
+
"ECO_0007166"
|
|
8260
|
+
)
|
|
7977
8261
|
|
|
7978
8262
|
# splice site mutation phenotypic evidence used in manual assertion
|
|
7979
8263
|
ECO_0007167 = "ECO_0007167"
|
|
@@ -8013,7 +8297,9 @@ class ECO(str, Enum):
|
|
|
8013
8297
|
|
|
8014
8298
|
# cell-attached single-channel recording evidence used in manual assertion
|
|
8015
8299
|
ECO_0007176 = "ECO_0007176"
|
|
8016
|
-
CELL_ATTACHED_SINGLE_CHANNEL_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8300
|
+
CELL_ATTACHED_SINGLE_CHANNEL_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8301
|
+
"ECO_0007176"
|
|
8302
|
+
)
|
|
8017
8303
|
|
|
8018
8304
|
# cell-detached inside-out single-channel recording evidence used in manual assertion
|
|
8019
8305
|
ECO_0007177 = "ECO_0007177"
|
|
@@ -8033,7 +8319,9 @@ class ECO(str, Enum):
|
|
|
8033
8319
|
|
|
8034
8320
|
# cut-open oocyte voltage clamp recording evidence used in manual assertion
|
|
8035
8321
|
ECO_0007181 = "ECO_0007181"
|
|
8036
|
-
CUT_OPEN_OOCYTE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8322
|
+
CUT_OPEN_OOCYTE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8323
|
+
"ECO_0007181"
|
|
8324
|
+
)
|
|
8037
8325
|
|
|
8038
8326
|
# macropatch voltage clamp recording evidence used in manual assertion
|
|
8039
8327
|
ECO_0007182 = "ECO_0007182"
|
|
@@ -8061,15 +8349,21 @@ class ECO(str, Enum):
|
|
|
8061
8349
|
|
|
8062
8350
|
# obsolete inference from experimental data evidence used in manual assertion
|
|
8063
8351
|
ECO_0007189 = "ECO_0007189"
|
|
8064
|
-
OBSOLETE_INFERENCE_FROM_EXPERIMENTAL_DATA_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8352
|
+
OBSOLETE_INFERENCE_FROM_EXPERIMENTAL_DATA_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8353
|
+
"ECO_0007189"
|
|
8354
|
+
)
|
|
8065
8355
|
|
|
8066
8356
|
# obsolete inference from phenotype manipulation evidence used in manual assertion
|
|
8067
8357
|
ECO_0007190 = "ECO_0007190"
|
|
8068
|
-
OBSOLETE_INFERENCE_FROM_PHENOTYPE_MANIPULATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
8358
|
+
OBSOLETE_INFERENCE_FROM_PHENOTYPE_MANIPULATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
8359
|
+
"ECO_0007190"
|
|
8360
|
+
)
|
|
8069
8361
|
|
|
8070
8362
|
# inference by association of genotype from phenotype used in manual assertion
|
|
8071
8363
|
ECO_0007191 = "ECO_0007191"
|
|
8072
|
-
INFERENCE_BY_ASSOCIATION_OF_GENOTYPE_FROM_PHENOTYPE_USED_IN_MANUAL_ASSERTION =
|
|
8364
|
+
INFERENCE_BY_ASSOCIATION_OF_GENOTYPE_FROM_PHENOTYPE_USED_IN_MANUAL_ASSERTION = (
|
|
8365
|
+
"ECO_0007191"
|
|
8366
|
+
)
|
|
8073
8367
|
|
|
8074
8368
|
# motility assay evidence used in manual assertion
|
|
8075
8369
|
ECO_0007192 = "ECO_0007192"
|
|
@@ -8077,7 +8371,9 @@ class ECO(str, Enum):
|
|
|
8077
8371
|
|
|
8078
8372
|
# loss-of-function mutant phenotype evidence used in automatic assertion
|
|
8079
8373
|
ECO_0007193 = "ECO_0007193"
|
|
8080
|
-
LOSS_OF_FUNCTION_MUTANT_PHENOTYPE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8374
|
+
LOSS_OF_FUNCTION_MUTANT_PHENOTYPE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8375
|
+
"ECO_0007193"
|
|
8376
|
+
)
|
|
8081
8377
|
|
|
8082
8378
|
# structural similarity evidence used in automatic assertion
|
|
8083
8379
|
ECO_0007194 = "ECO_0007194"
|
|
@@ -8085,11 +8381,15 @@ class ECO(str, Enum):
|
|
|
8085
8381
|
|
|
8086
8382
|
# gain-of-function mutant phenotypic evidence used in automatic assertion
|
|
8087
8383
|
ECO_0007196 = "ECO_0007196"
|
|
8088
|
-
GAIN_OF_FUNCTION_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8384
|
+
GAIN_OF_FUNCTION_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8385
|
+
"ECO_0007196"
|
|
8386
|
+
)
|
|
8089
8387
|
|
|
8090
8388
|
# voucher specimen phenotypic analysis evidence used in automatic assertion
|
|
8091
8389
|
ECO_0007197 = "ECO_0007197"
|
|
8092
|
-
VOUCHER_SPECIMEN_PHENOTYPIC_ANALYSIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8390
|
+
VOUCHER_SPECIMEN_PHENOTYPIC_ANALYSIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8391
|
+
"ECO_0007197"
|
|
8392
|
+
)
|
|
8093
8393
|
|
|
8094
8394
|
# positional similarity evidence used in automatic assertion
|
|
8095
8395
|
ECO_0007198 = "ECO_0007198"
|
|
@@ -8125,11 +8425,15 @@ class ECO(str, Enum):
|
|
|
8125
8425
|
|
|
8126
8426
|
# intermethylated site amplification evidence used in automatic assertion
|
|
8127
8427
|
ECO_0007206 = "ECO_0007206"
|
|
8128
|
-
INTERMETHYLATED_SITE_AMPLIFICATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8428
|
+
INTERMETHYLATED_SITE_AMPLIFICATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8429
|
+
"ECO_0007206"
|
|
8430
|
+
)
|
|
8129
8431
|
|
|
8130
8432
|
# epitope-tagged protein immunolocalization evidence used in automatic assertion
|
|
8131
8433
|
ECO_0007207 = "ECO_0007207"
|
|
8132
|
-
EPITOPE_TAGGED_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8434
|
+
EPITOPE_TAGGED_PROTEIN_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8435
|
+
"ECO_0007207"
|
|
8436
|
+
)
|
|
8133
8437
|
|
|
8134
8438
|
# co-fractionation evidence used in automatic assertion
|
|
8135
8439
|
ECO_0007208 = "ECO_0007208"
|
|
@@ -8173,7 +8477,9 @@ class ECO(str, Enum):
|
|
|
8173
8477
|
|
|
8174
8478
|
# two-electrode voltage clamp recording evidence used in automatic assertion
|
|
8175
8479
|
ECO_0007219 = "ECO_0007219"
|
|
8176
|
-
TWO_ELECTRODE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8480
|
+
TWO_ELECTRODE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8481
|
+
"ECO_0007219"
|
|
8482
|
+
)
|
|
8177
8483
|
|
|
8178
8484
|
# biochemical trait analysis evidence used in automatic assertion
|
|
8179
8485
|
ECO_0007220 = "ECO_0007220"
|
|
@@ -8225,7 +8531,9 @@ class ECO(str, Enum):
|
|
|
8225
8531
|
|
|
8226
8532
|
# chromatin immunoprecipitation-qPCR evidence used in automatic assertion
|
|
8227
8533
|
ECO_0007233 = "ECO_0007233"
|
|
8228
|
-
CHROMATIN_IMMUNOPRECIPITATION_QPCR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8534
|
+
CHROMATIN_IMMUNOPRECIPITATION_QPCR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8535
|
+
"ECO_0007233"
|
|
8536
|
+
)
|
|
8229
8537
|
|
|
8230
8538
|
# 4C evidence used in automatic assertion
|
|
8231
8539
|
ECO_0007234 = "ECO_0007234"
|
|
@@ -8249,7 +8557,9 @@ class ECO(str, Enum):
|
|
|
8249
8557
|
|
|
8250
8558
|
# environmental perturbation phenotypic evidence used in automatic assertion
|
|
8251
8559
|
ECO_0007240 = "ECO_0007240"
|
|
8252
|
-
ENVIRONMENTAL_PERTURBATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8560
|
+
ENVIRONMENTAL_PERTURBATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8561
|
+
"ECO_0007240"
|
|
8562
|
+
)
|
|
8253
8563
|
|
|
8254
8564
|
# tissue ablation phenotypic evidence used in automatic assertion
|
|
8255
8565
|
ECO_0007241 = "ECO_0007241"
|
|
@@ -8277,7 +8587,9 @@ class ECO(str, Enum):
|
|
|
8277
8587
|
|
|
8278
8588
|
# nano-cap analysis of gene expression evidence used in automatic assertion
|
|
8279
8589
|
ECO_0007249 = "ECO_0007249"
|
|
8280
|
-
NANO_CAP_ANALYSIS_OF_GENE_EXPRESSION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8590
|
+
NANO_CAP_ANALYSIS_OF_GENE_EXPRESSION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8591
|
+
"ECO_0007249"
|
|
8592
|
+
)
|
|
8281
8593
|
|
|
8282
8594
|
# particle size and count assay evidence used in automatic assertion
|
|
8283
8595
|
ECO_0007250 = "ECO_0007250"
|
|
@@ -8289,11 +8601,15 @@ class ECO(str, Enum):
|
|
|
8289
8601
|
|
|
8290
8602
|
# pulsed-field gel electrophoresis evidence used in automatic assertion
|
|
8291
8603
|
ECO_0007252 = "ECO_0007252"
|
|
8292
|
-
PULSED_FIELD_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8604
|
+
PULSED_FIELD_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8605
|
+
"ECO_0007252"
|
|
8606
|
+
)
|
|
8293
8607
|
|
|
8294
8608
|
# two-dimensional agarose gel electrophoresis evidence used in automatic assertion
|
|
8295
8609
|
ECO_0007253 = "ECO_0007253"
|
|
8296
|
-
TWO_DIMENSIONAL_AGAROSE_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8610
|
+
TWO_DIMENSIONAL_AGAROSE_GEL_ELECTROPHORESIS_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8611
|
+
"ECO_0007253"
|
|
8612
|
+
)
|
|
8297
8613
|
|
|
8298
8614
|
# plasmid maintenance assay evidence used in automatic assertion
|
|
8299
8615
|
ECO_0007254 = "ECO_0007254"
|
|
@@ -8301,7 +8617,9 @@ class ECO(str, Enum):
|
|
|
8301
8617
|
|
|
8302
8618
|
# specific protein inhibition by antibody evidence used in automatic assertion
|
|
8303
8619
|
ECO_0007255 = "ECO_0007255"
|
|
8304
|
-
SPECIFIC_PROTEIN_INHIBITION_BY_ANTIBODY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8620
|
+
SPECIFIC_PROTEIN_INHIBITION_BY_ANTIBODY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8621
|
+
"ECO_0007255"
|
|
8622
|
+
)
|
|
8305
8623
|
|
|
8306
8624
|
# single exon transcript confirmation via alignment evidence used in automatic assertion
|
|
8307
8625
|
ECO_0007256 = "ECO_0007256"
|
|
@@ -8329,7 +8647,9 @@ class ECO(str, Enum):
|
|
|
8329
8647
|
|
|
8330
8648
|
# obsolete visual sequence inspection evidence used in automatic assertion
|
|
8331
8649
|
ECO_0007262 = "ECO_0007262"
|
|
8332
|
-
OBSOLETE_VISUAL_SEQUENCE_INSPECTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8650
|
+
OBSOLETE_VISUAL_SEQUENCE_INSPECTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8651
|
+
"ECO_0007262"
|
|
8652
|
+
)
|
|
8333
8653
|
|
|
8334
8654
|
# ATP bioluminescence assay evidence used in automatic assertion
|
|
8335
8655
|
ECO_0007263 = "ECO_0007263"
|
|
@@ -8361,7 +8681,9 @@ class ECO(str, Enum):
|
|
|
8361
8681
|
|
|
8362
8682
|
# repeat expansion mutation phenotypic evidence used in automatic assertion
|
|
8363
8683
|
ECO_0007270 = "ECO_0007270"
|
|
8364
|
-
REPEAT_EXPANSION_MUTATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8684
|
+
REPEAT_EXPANSION_MUTATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8685
|
+
"ECO_0007270"
|
|
8686
|
+
)
|
|
8365
8687
|
|
|
8366
8688
|
# splice site mutation phenotypic evidence used in automatic assertion
|
|
8367
8689
|
ECO_0007271 = "ECO_0007271"
|
|
@@ -8369,7 +8691,9 @@ class ECO(str, Enum):
|
|
|
8369
8691
|
|
|
8370
8692
|
# translocation mutation phenotypic evidence used in automatic assertion
|
|
8371
8693
|
ECO_0007272 = "ECO_0007272"
|
|
8372
|
-
TRANSLOCATION_MUTATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8694
|
+
TRANSLOCATION_MUTATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8695
|
+
"ECO_0007272"
|
|
8696
|
+
)
|
|
8373
8697
|
|
|
8374
8698
|
# in-gel protein kinase assay evidence used in automatic assertion
|
|
8375
8699
|
ECO_0007273 = "ECO_0007273"
|
|
@@ -8397,11 +8721,15 @@ class ECO(str, Enum):
|
|
|
8397
8721
|
|
|
8398
8722
|
# whole-cell voltage clamp recording evidence used in automatic assertion
|
|
8399
8723
|
ECO_0007279 = "ECO_0007279"
|
|
8400
|
-
WHOLE_CELL_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8724
|
+
WHOLE_CELL_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8725
|
+
"ECO_0007279"
|
|
8726
|
+
)
|
|
8401
8727
|
|
|
8402
8728
|
# cell-attached single-channel recording evidence used in automatic assertion
|
|
8403
8729
|
ECO_0007280 = "ECO_0007280"
|
|
8404
|
-
CELL_ATTACHED_SINGLE_CHANNEL_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8730
|
+
CELL_ATTACHED_SINGLE_CHANNEL_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8731
|
+
"ECO_0007280"
|
|
8732
|
+
)
|
|
8405
8733
|
|
|
8406
8734
|
# cell-detached inside-out single-channel recording evidence used in automatic assertion
|
|
8407
8735
|
ECO_0007281 = "ECO_0007281"
|
|
@@ -8413,7 +8741,9 @@ class ECO(str, Enum):
|
|
|
8413
8741
|
|
|
8414
8742
|
# electroencephalography recording evidence used in automatic assertion
|
|
8415
8743
|
ECO_0007283 = "ECO_0007283"
|
|
8416
|
-
ELECTROENCEPHALOGRAPHY_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8744
|
+
ELECTROENCEPHALOGRAPHY_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8745
|
+
"ECO_0007283"
|
|
8746
|
+
)
|
|
8417
8747
|
|
|
8418
8748
|
# cell-detached outside-out single-channel recording evidence used in automatic assertion
|
|
8419
8749
|
ECO_0007284 = "ECO_0007284"
|
|
@@ -8421,11 +8751,15 @@ class ECO(str, Enum):
|
|
|
8421
8751
|
|
|
8422
8752
|
# cut-open oocyte voltage clamp recording evidence used in automatic assertion
|
|
8423
8753
|
ECO_0007285 = "ECO_0007285"
|
|
8424
|
-
CUT_OPEN_OOCYTE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8754
|
+
CUT_OPEN_OOCYTE_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8755
|
+
"ECO_0007285"
|
|
8756
|
+
)
|
|
8425
8757
|
|
|
8426
8758
|
# macropatch voltage clamp recording evidence used in automatic assertion
|
|
8427
8759
|
ECO_0007286 = "ECO_0007286"
|
|
8428
|
-
MACROPATCH_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8760
|
+
MACROPATCH_VOLTAGE_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8761
|
+
"ECO_0007286"
|
|
8762
|
+
)
|
|
8429
8763
|
|
|
8430
8764
|
# protein mass spectrometry evidence used in automatic assertion
|
|
8431
8765
|
ECO_0007288 = "ECO_0007288"
|
|
@@ -8449,7 +8783,9 @@ class ECO(str, Enum):
|
|
|
8449
8783
|
|
|
8450
8784
|
# obsolete inference from experimental data evidence used in automatic assertion
|
|
8451
8785
|
ECO_0007293 = "ECO_0007293"
|
|
8452
|
-
OBSOLETE_INFERENCE_FROM_EXPERIMENTAL_DATA_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8786
|
+
OBSOLETE_INFERENCE_FROM_EXPERIMENTAL_DATA_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8787
|
+
"ECO_0007293"
|
|
8788
|
+
)
|
|
8453
8789
|
|
|
8454
8790
|
# obsolete inference from phenotype manipulation evidence used in automatic assertion
|
|
8455
8791
|
ECO_0007294 = "ECO_0007294"
|
|
@@ -8457,7 +8793,9 @@ class ECO(str, Enum):
|
|
|
8457
8793
|
|
|
8458
8794
|
# inference by association of genotype from phenotype used in automatic assertion
|
|
8459
8795
|
ECO_0007295 = "ECO_0007295"
|
|
8460
|
-
INFERENCE_BY_ASSOCIATION_OF_GENOTYPE_FROM_PHENOTYPE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8796
|
+
INFERENCE_BY_ASSOCIATION_OF_GENOTYPE_FROM_PHENOTYPE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8797
|
+
"ECO_0007295"
|
|
8798
|
+
)
|
|
8461
8799
|
|
|
8462
8800
|
# motility assay evidence used in automatic assertion
|
|
8463
8801
|
ECO_0007296 = "ECO_0007296"
|
|
@@ -8477,7 +8815,9 @@ class ECO(str, Enum):
|
|
|
8477
8815
|
|
|
8478
8816
|
# cRNA to DNA expression microarray evidence used in automatic assertion
|
|
8479
8817
|
ECO_0007300 = "ECO_0007300"
|
|
8480
|
-
CRNA_TO_DNA_EXPRESSION_MICROARRAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8818
|
+
CRNA_TO_DNA_EXPRESSION_MICROARRAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8819
|
+
"ECO_0007300"
|
|
8820
|
+
)
|
|
8481
8821
|
|
|
8482
8822
|
# expression microarray evidence used in automatic assertion
|
|
8483
8823
|
ECO_0007301 = "ECO_0007301"
|
|
@@ -8485,7 +8825,9 @@ class ECO(str, Enum):
|
|
|
8485
8825
|
|
|
8486
8826
|
# differential methylation hybridization evidence used in automatic assertion
|
|
8487
8827
|
ECO_0007302 = "ECO_0007302"
|
|
8488
|
-
DIFFERENTIAL_METHYLATION_HYBRIDIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8828
|
+
DIFFERENTIAL_METHYLATION_HYBRIDIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8829
|
+
"ECO_0007302"
|
|
8830
|
+
)
|
|
8489
8831
|
|
|
8490
8832
|
# transcript expression evidence used in automatic assertion
|
|
8491
8833
|
ECO_0007303 = "ECO_0007303"
|
|
@@ -8501,7 +8843,9 @@ class ECO(str, Enum):
|
|
|
8501
8843
|
|
|
8502
8844
|
# qualitative western immunoblotting evidence used in automatic assertion
|
|
8503
8845
|
ECO_0007306 = "ECO_0007306"
|
|
8504
|
-
QUALITATIVE_WESTERN_IMMUNOBLOTTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8846
|
+
QUALITATIVE_WESTERN_IMMUNOBLOTTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8847
|
+
"ECO_0007306"
|
|
8848
|
+
)
|
|
8505
8849
|
|
|
8506
8850
|
# direct assay evidence used in automatic assertion
|
|
8507
8851
|
ECO_0007307 = "ECO_0007307"
|
|
@@ -8521,11 +8865,15 @@ class ECO(str, Enum):
|
|
|
8521
8865
|
|
|
8522
8866
|
# spatial pattern of protein expression evidence used in automatic assertion
|
|
8523
8867
|
ECO_0007312 = "ECO_0007312"
|
|
8524
|
-
SPATIAL_PATTERN_OF_PROTEIN_EXPRESSION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8868
|
+
SPATIAL_PATTERN_OF_PROTEIN_EXPRESSION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8869
|
+
"ECO_0007312"
|
|
8870
|
+
)
|
|
8525
8871
|
|
|
8526
8872
|
# DNA to cDNA expression microarray evidence used in automatic assertion
|
|
8527
8873
|
ECO_0007313 = "ECO_0007313"
|
|
8528
|
-
DNA_TO_CDNA_EXPRESSION_MICROARRAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8874
|
+
DNA_TO_CDNA_EXPRESSION_MICROARRAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8875
|
+
"ECO_0007313"
|
|
8876
|
+
)
|
|
8529
8877
|
|
|
8530
8878
|
# differential hybridization evidence used in automatic assertion
|
|
8531
8879
|
ECO_0007314 = "ECO_0007314"
|
|
@@ -8541,7 +8889,9 @@ class ECO(str, Enum):
|
|
|
8541
8889
|
|
|
8542
8890
|
# spatial pattern of transcript expression evidence used in automatic assertion
|
|
8543
8891
|
ECO_0007317 = "ECO_0007317"
|
|
8544
|
-
SPATIAL_PATTERN_OF_TRANSCRIPT_EXPRESSION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8892
|
+
SPATIAL_PATTERN_OF_TRANSCRIPT_EXPRESSION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8893
|
+
"ECO_0007317"
|
|
8894
|
+
)
|
|
8545
8895
|
|
|
8546
8896
|
# subtractive hybridization evidence used in automatic assertion
|
|
8547
8897
|
ECO_0007318 = "ECO_0007318"
|
|
@@ -8553,11 +8903,15 @@ class ECO(str, Enum):
|
|
|
8553
8903
|
|
|
8554
8904
|
# author statement without traceable support used in automatic assertion
|
|
8555
8905
|
ECO_0007320 = "ECO_0007320"
|
|
8556
|
-
AUTHOR_STATEMENT_WITHOUT_TRACEABLE_SUPPORT_USED_IN_AUTOMATIC_ASSERTION =
|
|
8906
|
+
AUTHOR_STATEMENT_WITHOUT_TRACEABLE_SUPPORT_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8907
|
+
"ECO_0007320"
|
|
8908
|
+
)
|
|
8557
8909
|
|
|
8558
8910
|
# author statement supported by traceable reference used in automatic assertion
|
|
8559
8911
|
ECO_0007321 = "ECO_0007321"
|
|
8560
|
-
AUTHOR_STATEMENT_SUPPORTED_BY_TRACEABLE_REFERENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8912
|
+
AUTHOR_STATEMENT_SUPPORTED_BY_TRACEABLE_REFERENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8913
|
+
"ECO_0007321"
|
|
8914
|
+
)
|
|
8561
8915
|
|
|
8562
8916
|
# curator inference used in automatic assertion
|
|
8563
8917
|
ECO_0007322 = "ECO_0007322"
|
|
@@ -8565,7 +8919,9 @@ class ECO(str, Enum):
|
|
|
8565
8919
|
|
|
8566
8920
|
# inference from background scientific knowledge used in automatic assertion
|
|
8567
8921
|
ECO_0007323 = "ECO_0007323"
|
|
8568
|
-
INFERENCE_FROM_BACKGROUND_SCIENTIFIC_KNOWLEDGE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8922
|
+
INFERENCE_FROM_BACKGROUND_SCIENTIFIC_KNOWLEDGE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8923
|
+
"ECO_0007323"
|
|
8924
|
+
)
|
|
8569
8925
|
|
|
8570
8926
|
# no evidence data found used in automatic assertion
|
|
8571
8927
|
ECO_0007324 = "ECO_0007324"
|
|
@@ -8597,7 +8953,9 @@ class ECO(str, Enum):
|
|
|
8597
8953
|
|
|
8598
8954
|
# rapid divergence from ancestral sequence evidence used in automatic assertion
|
|
8599
8955
|
ECO_0007331 = "ECO_0007331"
|
|
8600
|
-
RAPID_DIVERGENCE_FROM_ANCESTRAL_SEQUENCE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8956
|
+
RAPID_DIVERGENCE_FROM_ANCESTRAL_SEQUENCE_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8957
|
+
"ECO_0007331"
|
|
8958
|
+
)
|
|
8601
8959
|
|
|
8602
8960
|
# physical interaction evidence used in automatic assertion
|
|
8603
8961
|
ECO_0007332 = "ECO_0007332"
|
|
@@ -8625,11 +8983,15 @@ class ECO(str, Enum):
|
|
|
8625
8983
|
|
|
8626
8984
|
# [3H]-thymidine incorporation assay evidence used in automatic assertion
|
|
8627
8985
|
ECO_0007338 = "ECO_0007338"
|
|
8628
|
-
_3H__THYMIDINE_INCORPORATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8986
|
+
_3H__THYMIDINE_INCORPORATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8987
|
+
"ECO_0007338"
|
|
8988
|
+
)
|
|
8629
8989
|
|
|
8630
8990
|
# [3H]arachidonic acid release assay evidence used in automatic assertion
|
|
8631
8991
|
ECO_0007339 = "ECO_0007339"
|
|
8632
|
-
_3H_ARACHIDONIC_ACID_RELEASE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
8992
|
+
_3H_ARACHIDONIC_ACID_RELEASE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
8993
|
+
"ECO_0007339"
|
|
8994
|
+
)
|
|
8633
8995
|
|
|
8634
8996
|
# adhesion assay evidence used in automatic assertion
|
|
8635
8997
|
ECO_0007340 = "ECO_0007340"
|
|
@@ -8645,7 +9007,9 @@ class ECO(str, Enum):
|
|
|
8645
9007
|
|
|
8646
9008
|
# allograft transplantation phenotypic evidence used in automatic assertion
|
|
8647
9009
|
ECO_0007343 = "ECO_0007343"
|
|
8648
|
-
ALLOGRAFT_TRANSPLANTATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9010
|
+
ALLOGRAFT_TRANSPLANTATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9011
|
+
"ECO_0007343"
|
|
9012
|
+
)
|
|
8649
9013
|
|
|
8650
9014
|
# anion-exchange chromatography evidence used in automatic assertion
|
|
8651
9015
|
ECO_0007344 = "ECO_0007344"
|
|
@@ -8685,11 +9049,15 @@ class ECO(str, Enum):
|
|
|
8685
9049
|
|
|
8686
9050
|
# bromodeoxyuridine incorporation assay evidence used in automatic assertion
|
|
8687
9051
|
ECO_0007353 = "ECO_0007353"
|
|
8688
|
-
BROMODEOXYURIDINE_INCORPORATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9052
|
+
BROMODEOXYURIDINE_INCORPORATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9053
|
+
"ECO_0007353"
|
|
9054
|
+
)
|
|
8689
9055
|
|
|
8690
9056
|
# nucleotide analog incorporation assay evidence used in automatic assertion
|
|
8691
9057
|
ECO_0007354 = "ECO_0007354"
|
|
8692
|
-
NUCLEOTIDE_ANALOG_INCORPORATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9058
|
+
NUCLEOTIDE_ANALOG_INCORPORATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9059
|
+
"ECO_0007354"
|
|
9060
|
+
)
|
|
8693
9061
|
|
|
8694
9062
|
# caspase assay evidence used in automatic assertion
|
|
8695
9063
|
ECO_0007355 = "ECO_0007355"
|
|
@@ -8709,7 +9077,9 @@ class ECO(str, Enum):
|
|
|
8709
9077
|
|
|
8710
9078
|
# chemiluminescence-linked immunoassay evidence used in automatic assertion
|
|
8711
9079
|
ECO_0007359 = "ECO_0007359"
|
|
8712
|
-
CHEMILUMINESCENCE_LINKED_IMMUNOASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9080
|
+
CHEMILUMINESCENCE_LINKED_IMMUNOASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9081
|
+
"ECO_0007359"
|
|
9082
|
+
)
|
|
8713
9083
|
|
|
8714
9084
|
# chimeric protein phenotypic evidence used in automatic assertion
|
|
8715
9085
|
ECO_0007360 = "ECO_0007360"
|
|
@@ -8757,7 +9127,9 @@ class ECO(str, Enum):
|
|
|
8757
9127
|
|
|
8758
9128
|
# constitutively active mutant protein evidence used in automatic assertion
|
|
8759
9129
|
ECO_0007371 = "ECO_0007371"
|
|
8760
|
-
CONSTITUTIVELY_ACTIVE_MUTANT_PROTEIN_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9130
|
+
CONSTITUTIVELY_ACTIVE_MUTANT_PROTEIN_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9131
|
+
"ECO_0007371"
|
|
9132
|
+
)
|
|
8761
9133
|
|
|
8762
9134
|
# cross-linking evidence used in automatic assertion
|
|
8763
9135
|
ECO_0007372 = "ECO_0007372"
|
|
@@ -8785,7 +9157,9 @@ class ECO(str, Enum):
|
|
|
8785
9157
|
|
|
8786
9158
|
# 4',6-diamidino-2-phenylindole staining evidence used in automatic assertion
|
|
8787
9159
|
ECO_0007378 = "ECO_0007378"
|
|
8788
|
-
_4__6_DIAMIDINO_2_PHENYLINDOLE_STAINING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9160
|
+
_4__6_DIAMIDINO_2_PHENYLINDOLE_STAINING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9161
|
+
"ECO_0007378"
|
|
9162
|
+
)
|
|
8789
9163
|
|
|
8790
9164
|
# deletion mutation phenotypic evidence used in automatic assertion
|
|
8791
9165
|
ECO_0007379 = "ECO_0007379"
|
|
@@ -8801,7 +9175,9 @@ class ECO(str, Enum):
|
|
|
8801
9175
|
|
|
8802
9176
|
# dominant-negative mutant phenotypic evidence used in automatic assertion
|
|
8803
9177
|
ECO_0007382 = "ECO_0007382"
|
|
8804
|
-
DOMINANT_NEGATIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9178
|
+
DOMINANT_NEGATIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9179
|
+
"ECO_0007382"
|
|
9180
|
+
)
|
|
8805
9181
|
|
|
8806
9182
|
# eTag assay evidence used in automatic assertion
|
|
8807
9183
|
ECO_0007383 = "ECO_0007383"
|
|
@@ -8817,11 +9193,15 @@ class ECO(str, Enum):
|
|
|
8817
9193
|
|
|
8818
9194
|
# fluorescence in situ hybridization evidence used in automatic assertion
|
|
8819
9195
|
ECO_0007386 = "ECO_0007386"
|
|
8820
|
-
FLUORESCENCE_IN_SITU_HYBRIDIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9196
|
+
FLUORESCENCE_IN_SITU_HYBRIDIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9197
|
+
"ECO_0007386"
|
|
9198
|
+
)
|
|
8821
9199
|
|
|
8822
9200
|
# fluorescence resonance energy transfer evidence used in automatic assertion
|
|
8823
9201
|
ECO_0007387 = "ECO_0007387"
|
|
8824
|
-
FLUORESCENCE_RESONANCE_ENERGY_TRANSFER_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9202
|
+
FLUORESCENCE_RESONANCE_ENERGY_TRANSFER_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9203
|
+
"ECO_0007387"
|
|
9204
|
+
)
|
|
8825
9205
|
|
|
8826
9206
|
# gel-filtration evidence used in automatic assertion
|
|
8827
9207
|
ECO_0007388 = "ECO_0007388"
|
|
@@ -8889,7 +9269,9 @@ class ECO(str, Enum):
|
|
|
8889
9269
|
|
|
8890
9270
|
# in vitro polyADP-ribosylation assay evidence used in automatic assertion
|
|
8891
9271
|
ECO_0007404 = "ECO_0007404"
|
|
8892
|
-
IN_VITRO_POLYADP_RIBOSYLATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9272
|
+
IN_VITRO_POLYADP_RIBOSYLATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9273
|
+
"ECO_0007404"
|
|
9274
|
+
)
|
|
8893
9275
|
|
|
8894
9276
|
# in vitro protein kinase assay evidence used in automatic assertion
|
|
8895
9277
|
ECO_0007405 = "ECO_0007405"
|
|
@@ -9029,7 +9411,9 @@ class ECO(str, Enum):
|
|
|
9029
9411
|
|
|
9030
9412
|
# multiplex bead-based immunoassay evidence used in automatic assertion
|
|
9031
9413
|
ECO_0007439 = "ECO_0007439"
|
|
9032
|
-
MULTIPLEX_BEAD_BASED_IMMUNOASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9414
|
+
MULTIPLEX_BEAD_BASED_IMMUNOASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9415
|
+
"ECO_0007439"
|
|
9416
|
+
)
|
|
9033
9417
|
|
|
9034
9418
|
# natural variation mutant evidence used in automatic assertion
|
|
9035
9419
|
ECO_0007440 = "ECO_0007440"
|
|
@@ -9109,7 +9493,9 @@ class ECO(str, Enum):
|
|
|
9109
9493
|
|
|
9110
9494
|
# syngeneic transplantation experiment evidence used in automatic assertion
|
|
9111
9495
|
ECO_0007459 = "ECO_0007459"
|
|
9112
|
-
SYNGENEIC_TRANSPLANTATION_EXPERIMENT_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9496
|
+
SYNGENEIC_TRANSPLANTATION_EXPERIMENT_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9497
|
+
"ECO_0007459"
|
|
9498
|
+
)
|
|
9113
9499
|
|
|
9114
9500
|
# xenotransplantation phenotypic evidence used in automatic assertion
|
|
9115
9501
|
ECO_0007460 = "ECO_0007460"
|
|
@@ -9129,7 +9515,9 @@ class ECO(str, Enum):
|
|
|
9129
9515
|
|
|
9130
9516
|
# tryptic phosphopeptide mapping assay evidence used in automatic assertion
|
|
9131
9517
|
ECO_0007464 = "ECO_0007464"
|
|
9132
|
-
TRYPTIC_PHOSPHOPEPTIDE_MAPPING_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9518
|
+
TRYPTIC_PHOSPHOPEPTIDE_MAPPING_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9519
|
+
"ECO_0007464"
|
|
9520
|
+
)
|
|
9133
9521
|
|
|
9134
9522
|
# transgenic organism evidence used in automatic assertion
|
|
9135
9523
|
ECO_0007465 = "ECO_0007465"
|
|
@@ -9153,7 +9541,9 @@ class ECO(str, Enum):
|
|
|
9153
9541
|
|
|
9154
9542
|
# restriction landmark genomic scanning evidence used in automatic assertion
|
|
9155
9543
|
ECO_0007470 = "ECO_0007470"
|
|
9156
|
-
RESTRICTION_LANDMARK_GENOMIC_SCANNING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9544
|
+
RESTRICTION_LANDMARK_GENOMIC_SCANNING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9545
|
+
"ECO_0007470"
|
|
9546
|
+
)
|
|
9157
9547
|
|
|
9158
9548
|
# resonant mirror biosensor evidence used in automatic assertion
|
|
9159
9549
|
ECO_0007471 = "ECO_0007471"
|
|
@@ -9161,7 +9551,9 @@ class ECO(str, Enum):
|
|
|
9161
9551
|
|
|
9162
9552
|
# high-performance liquid chromatography evidence used in automatic assertion
|
|
9163
9553
|
ECO_0007472 = "ECO_0007472"
|
|
9164
|
-
HIGH_PERFORMANCE_LIQUID_CHROMATOGRAPHY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9554
|
+
HIGH_PERFORMANCE_LIQUID_CHROMATOGRAPHY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9555
|
+
"ECO_0007472"
|
|
9556
|
+
)
|
|
9165
9557
|
|
|
9166
9558
|
# ectopic expression evidence used in automatic assertion
|
|
9167
9559
|
ECO_0007473 = "ECO_0007473"
|
|
@@ -9169,7 +9561,9 @@ class ECO(str, Enum):
|
|
|
9169
9561
|
|
|
9170
9562
|
# electrophoretic mobility shift assay evidence used in automatic assertion
|
|
9171
9563
|
ECO_0007474 = "ECO_0007474"
|
|
9172
|
-
ELECTROPHORETIC_MOBILITY_SHIFT_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9564
|
+
ELECTROPHORETIC_MOBILITY_SHIFT_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9565
|
+
"ECO_0007474"
|
|
9566
|
+
)
|
|
9173
9567
|
|
|
9174
9568
|
# reverse transcription polymerase chain reaction evidence used in automatic assertion
|
|
9175
9569
|
ECO_0007475 = "ECO_0007475"
|
|
@@ -9177,7 +9571,9 @@ class ECO(str, Enum):
|
|
|
9177
9571
|
|
|
9178
9572
|
# in vivo polyADP-ribosylation assay evidence used in automatic assertion
|
|
9179
9573
|
ECO_0007476 = "ECO_0007476"
|
|
9180
|
-
IN_VIVO_POLYADP_RIBOSYLATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9574
|
+
IN_VIVO_POLYADP_RIBOSYLATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9575
|
+
"ECO_0007476"
|
|
9576
|
+
)
|
|
9181
9577
|
|
|
9182
9578
|
# DNA dot blot assay evidence used in automatic assertion
|
|
9183
9579
|
ECO_0007477 = "ECO_0007477"
|
|
@@ -9225,11 +9621,15 @@ class ECO(str, Enum):
|
|
|
9225
9621
|
|
|
9226
9622
|
# enzyme-linked immunoabsorbent assay evidence used in automatic assertion
|
|
9227
9623
|
ECO_0007488 = "ECO_0007488"
|
|
9228
|
-
ENZYME_LINKED_IMMUNOABSORBENT_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9624
|
+
ENZYME_LINKED_IMMUNOABSORBENT_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9625
|
+
"ECO_0007488"
|
|
9626
|
+
)
|
|
9229
9627
|
|
|
9230
9628
|
# high throughput mass spectrometry evidence used in automatic assertion
|
|
9231
9629
|
ECO_0007489 = "ECO_0007489"
|
|
9232
|
-
HIGH_THROUGHPUT_MASS_SPECTROMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9630
|
+
HIGH_THROUGHPUT_MASS_SPECTROMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9631
|
+
"ECO_0007489"
|
|
9632
|
+
)
|
|
9233
9633
|
|
|
9234
9634
|
# confocal microscopy evidence used in automatic assertion
|
|
9235
9635
|
ECO_0007490 = "ECO_0007490"
|
|
@@ -9249,7 +9649,9 @@ class ECO(str, Enum):
|
|
|
9249
9649
|
|
|
9250
9650
|
# immunoperoxidase immunolocalization evidence used in automatic assertion
|
|
9251
9651
|
ECO_0007494 = "ECO_0007494"
|
|
9252
|
-
IMMUNOPEROXIDASE_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9652
|
+
IMMUNOPEROXIDASE_IMMUNOLOCALIZATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9653
|
+
"ECO_0007494"
|
|
9654
|
+
)
|
|
9253
9655
|
|
|
9254
9656
|
# immunoperoxidase immunolocalization electron microscopy evidence used in automatic assertion
|
|
9255
9657
|
ECO_0007495 = "ECO_0007495"
|
|
@@ -9257,7 +9659,9 @@ class ECO(str, Enum):
|
|
|
9257
9659
|
|
|
9258
9660
|
# immunofluorescence confocal microscopy evidence used in automatic assertion
|
|
9259
9661
|
ECO_0007496 = "ECO_0007496"
|
|
9260
|
-
IMMUNOFLUORESCENCE_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9662
|
+
IMMUNOFLUORESCENCE_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9663
|
+
"ECO_0007496"
|
|
9664
|
+
)
|
|
9261
9665
|
|
|
9262
9666
|
# immunofluorescence evidence used in automatic assertion
|
|
9263
9667
|
ECO_0007497 = "ECO_0007497"
|
|
@@ -9269,11 +9673,15 @@ class ECO(str, Enum):
|
|
|
9269
9673
|
|
|
9270
9674
|
# alkaline phosphatase reporter gene assay evidence used in automatic assertion
|
|
9271
9675
|
ECO_0007499 = "ECO_0007499"
|
|
9272
|
-
ALKALINE_PHOSPHATASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9676
|
+
ALKALINE_PHOSPHATASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9677
|
+
"ECO_0007499"
|
|
9678
|
+
)
|
|
9273
9679
|
|
|
9274
9680
|
# beta-galactosidase reporter gene assay evidence used in automatic assertion
|
|
9275
9681
|
ECO_0007500 = "ECO_0007500"
|
|
9276
|
-
BETA_GALACTOSIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9682
|
+
BETA_GALACTOSIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9683
|
+
"ECO_0007500"
|
|
9684
|
+
)
|
|
9277
9685
|
|
|
9278
9686
|
# chloramphenicol acetyltransferase reporter gene assay evidence used in automatic assertion
|
|
9279
9687
|
ECO_0007501 = "ECO_0007501"
|
|
@@ -9281,7 +9689,9 @@ class ECO(str, Enum):
|
|
|
9281
9689
|
|
|
9282
9690
|
# chromatin immunoprecipitation-PCR evidence used in automatic assertion
|
|
9283
9691
|
ECO_0007502 = "ECO_0007502"
|
|
9284
|
-
CHROMATIN_IMMUNOPRECIPITATION_PCR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9692
|
+
CHROMATIN_IMMUNOPRECIPITATION_PCR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9693
|
+
"ECO_0007502"
|
|
9694
|
+
)
|
|
9285
9695
|
|
|
9286
9696
|
# immunoprecipitation evidence used in automatic assertion
|
|
9287
9697
|
ECO_0007503 = "ECO_0007503"
|
|
@@ -9289,7 +9699,9 @@ class ECO(str, Enum):
|
|
|
9289
9699
|
|
|
9290
9700
|
# copper-phenanthroline footprinting evidence used in automatic assertion
|
|
9291
9701
|
ECO_0007504 = "ECO_0007504"
|
|
9292
|
-
COPPER_PHENANTHROLINE_FOOTPRINTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9702
|
+
COPPER_PHENANTHROLINE_FOOTPRINTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9703
|
+
"ECO_0007504"
|
|
9704
|
+
)
|
|
9293
9705
|
|
|
9294
9706
|
# nucleic acid binding evidence used in automatic assertion
|
|
9295
9707
|
ECO_0007505 = "ECO_0007505"
|
|
@@ -9309,7 +9721,9 @@ class ECO(str, Enum):
|
|
|
9309
9721
|
|
|
9310
9722
|
# ferric uptake regulator titration assay evidence used in automatic assertion
|
|
9311
9723
|
ECO_0007509 = "ECO_0007509"
|
|
9312
|
-
FERRIC_UPTAKE_REGULATOR_TITRATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9724
|
+
FERRIC_UPTAKE_REGULATOR_TITRATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9725
|
+
"ECO_0007509"
|
|
9726
|
+
)
|
|
9313
9727
|
|
|
9314
9728
|
# systematic evolution of ligands by exponential amplification evidence used in automatic assertion
|
|
9315
9729
|
ECO_0007510 = "ECO_0007510"
|
|
@@ -9317,11 +9731,15 @@ class ECO(str, Enum):
|
|
|
9317
9731
|
|
|
9318
9732
|
# glutathione S-transferase pull-down assay evidence used in automatic assertion
|
|
9319
9733
|
ECO_0007511 = "ECO_0007511"
|
|
9320
|
-
GLUTATHIONE_S_TRANSFERASE_PULL_DOWN_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9734
|
+
GLUTATHIONE_S_TRANSFERASE_PULL_DOWN_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9735
|
+
"ECO_0007511"
|
|
9736
|
+
)
|
|
9321
9737
|
|
|
9322
9738
|
# beta-glucuronidase reporter gene assay evidence used in automatic assertion
|
|
9323
9739
|
ECO_0007512 = "ECO_0007512"
|
|
9324
|
-
BETA_GLUCURONIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9740
|
+
BETA_GLUCURONIDASE_REPORTER_GENE_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9741
|
+
"ECO_0007512"
|
|
9742
|
+
)
|
|
9325
9743
|
|
|
9326
9744
|
# heteronuclear single quantum coherence spectroscopy evidence used in automatic assertion
|
|
9327
9745
|
ECO_0007513 = "ECO_0007513"
|
|
@@ -9333,7 +9751,9 @@ class ECO(str, Enum):
|
|
|
9333
9751
|
|
|
9334
9752
|
# isothermal titration calorimetry evidence used in automatic assertion
|
|
9335
9753
|
ECO_0007515 = "ECO_0007515"
|
|
9336
|
-
ISOTHERMAL_TITRATION_CALORIMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9754
|
+
ISOTHERMAL_TITRATION_CALORIMETRY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9755
|
+
"ECO_0007515"
|
|
9756
|
+
)
|
|
9337
9757
|
|
|
9338
9758
|
# luciferase reporter gene assay evidence used in automatic assertion
|
|
9339
9759
|
ECO_0007516 = "ECO_0007516"
|
|
@@ -9349,7 +9769,9 @@ class ECO(str, Enum):
|
|
|
9349
9769
|
|
|
9350
9770
|
# methylation interference footprinting evidence used in automatic assertion
|
|
9351
9771
|
ECO_0007519 = "ECO_0007519"
|
|
9352
|
-
METHYLATION_INTERFERENCE_FOOTPRINTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9772
|
+
METHYLATION_INTERFERENCE_FOOTPRINTING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9773
|
+
"ECO_0007519"
|
|
9774
|
+
)
|
|
9353
9775
|
|
|
9354
9776
|
# primer extension assay evidence used in automatic assertion
|
|
9355
9777
|
ECO_0007520 = "ECO_0007520"
|
|
@@ -9357,7 +9779,9 @@ class ECO(str, Enum):
|
|
|
9357
9779
|
|
|
9358
9780
|
# quantitative polymerase chain reaction evidence used in automatic assertion
|
|
9359
9781
|
ECO_0007521 = "ECO_0007521"
|
|
9360
|
-
QUANTITATIVE_POLYMERASE_CHAIN_REACTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9782
|
+
QUANTITATIVE_POLYMERASE_CHAIN_REACTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9783
|
+
"ECO_0007521"
|
|
9784
|
+
)
|
|
9361
9785
|
|
|
9362
9786
|
# rapid amplification of cDNA ends polymerase chain reaction evidence used in automatic assertion
|
|
9363
9787
|
ECO_0007522 = "ECO_0007522"
|
|
@@ -9369,7 +9793,9 @@ class ECO(str, Enum):
|
|
|
9369
9793
|
|
|
9370
9794
|
# site-directed mutagenesis phenotypic evidence used in automatic assertion
|
|
9371
9795
|
ECO_0007524 = "ECO_0007524"
|
|
9372
|
-
SITE_DIRECTED_MUTAGENESIS_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9796
|
+
SITE_DIRECTED_MUTAGENESIS_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9797
|
+
"ECO_0007524"
|
|
9798
|
+
)
|
|
9373
9799
|
|
|
9374
9800
|
# survival rate analysis evidence used in automatic assertion
|
|
9375
9801
|
ECO_0007525 = "ECO_0007525"
|
|
@@ -9385,11 +9811,15 @@ class ECO(str, Enum):
|
|
|
9385
9811
|
|
|
9386
9812
|
# ad-hoc qualitative phenotype observation evidence used in automatic assertion
|
|
9387
9813
|
ECO_0007528 = "ECO_0007528"
|
|
9388
|
-
AD_HOC_QUALITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9814
|
+
AD_HOC_QUALITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9815
|
+
"ECO_0007528"
|
|
9816
|
+
)
|
|
9389
9817
|
|
|
9390
9818
|
# ad-hoc quantitative phenotype observation evidence used in automatic assertion
|
|
9391
9819
|
ECO_0007529 = "ECO_0007529"
|
|
9392
|
-
AD_HOC_QUANTITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9820
|
+
AD_HOC_QUANTITATIVE_PHENOTYPE_OBSERVATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9821
|
+
"ECO_0007529"
|
|
9822
|
+
)
|
|
9393
9823
|
|
|
9394
9824
|
# cell transfection experiment evidence used in automatic assertion
|
|
9395
9825
|
ECO_0007530 = "ECO_0007530"
|
|
@@ -9425,7 +9855,9 @@ class ECO(str, Enum):
|
|
|
9425
9855
|
|
|
9426
9856
|
# whole-cell patch-clamp recording evidence used in automatic assertion
|
|
9427
9857
|
ECO_0007538 = "ECO_0007538"
|
|
9428
|
-
WHOLE_CELL_PATCH_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9858
|
+
WHOLE_CELL_PATCH_CLAMP_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9859
|
+
"ECO_0007538"
|
|
9860
|
+
)
|
|
9429
9861
|
|
|
9430
9862
|
# author statement supported from referenced clinical study used in automatic assertion
|
|
9431
9863
|
ECO_0007539 = "ECO_0007539"
|
|
@@ -9433,7 +9865,9 @@ class ECO(str, Enum):
|
|
|
9433
9865
|
|
|
9434
9866
|
# inference based on individual clinical experience used in automatic assertion
|
|
9435
9867
|
ECO_0007540 = "ECO_0007540"
|
|
9436
|
-
INFERENCE_BASED_ON_INDIVIDUAL_CLINICAL_EXPERIENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9868
|
+
INFERENCE_BASED_ON_INDIVIDUAL_CLINICAL_EXPERIENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9869
|
+
"ECO_0007540"
|
|
9870
|
+
)
|
|
9437
9871
|
|
|
9438
9872
|
# biofilm formation assay evidence used in automatic assertion
|
|
9439
9873
|
ECO_0007541 = "ECO_0007541"
|
|
@@ -9469,7 +9903,9 @@ class ECO(str, Enum):
|
|
|
9469
9903
|
|
|
9470
9904
|
# genetically encoded fluorescent sensor evidence used in automatic assertion
|
|
9471
9905
|
ECO_0007549 = "ECO_0007549"
|
|
9472
|
-
GENETICALLY_ENCODED_FLUORESCENT_SENSOR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9906
|
+
GENETICALLY_ENCODED_FLUORESCENT_SENSOR_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9907
|
+
"ECO_0007549"
|
|
9908
|
+
)
|
|
9473
9909
|
|
|
9474
9910
|
# genetically encoded fluorescent electrophysiology assay evidence used in automatic assertion
|
|
9475
9911
|
ECO_0007550 = "ECO_0007550"
|
|
@@ -9489,7 +9925,9 @@ class ECO(str, Enum):
|
|
|
9489
9925
|
|
|
9490
9926
|
# single-unit extracellular recording evidence used in automatic assertion
|
|
9491
9927
|
ECO_0007554 = "ECO_0007554"
|
|
9492
|
-
SINGLE_UNIT_EXTRACELLULAR_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9928
|
+
SINGLE_UNIT_EXTRACELLULAR_RECORDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9929
|
+
"ECO_0007554"
|
|
9930
|
+
)
|
|
9493
9931
|
|
|
9494
9932
|
# field potential recording evidence used in automatic assertion
|
|
9495
9933
|
ECO_0007555 = "ECO_0007555"
|
|
@@ -9513,11 +9951,15 @@ class ECO(str, Enum):
|
|
|
9513
9951
|
|
|
9514
9952
|
# immunofluorescence wide-field microscopy evidence used in automatic assertion
|
|
9515
9953
|
ECO_0007560 = "ECO_0007560"
|
|
9516
|
-
IMMUNOFLUORESCENCE_WIDE_FIELD_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9954
|
+
IMMUNOFLUORESCENCE_WIDE_FIELD_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9955
|
+
"ECO_0007560"
|
|
9956
|
+
)
|
|
9517
9957
|
|
|
9518
9958
|
# wide-field fluorescence microscopy evidence used in automatic assertion
|
|
9519
9959
|
ECO_0007561 = "ECO_0007561"
|
|
9520
|
-
WIDE_FIELD_FLUORESCENCE_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9960
|
+
WIDE_FIELD_FLUORESCENCE_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9961
|
+
"ECO_0007561"
|
|
9962
|
+
)
|
|
9521
9963
|
|
|
9522
9964
|
# over expression analysis evidence used in automatic assertion
|
|
9523
9965
|
ECO_0007562 = "ECO_0007562"
|
|
@@ -9529,11 +9971,15 @@ class ECO(str, Enum):
|
|
|
9529
9971
|
|
|
9530
9972
|
# fluorescence recovery after photobleaching evidence used in automatic assertion
|
|
9531
9973
|
ECO_0007564 = "ECO_0007564"
|
|
9532
|
-
FLUORESCENCE_RECOVERY_AFTER_PHOTOBLEACHING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9974
|
+
FLUORESCENCE_RECOVERY_AFTER_PHOTOBLEACHING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9975
|
+
"ECO_0007564"
|
|
9976
|
+
)
|
|
9533
9977
|
|
|
9534
9978
|
# immuno-labelling electron microscopy evidence used in automatic assertion
|
|
9535
9979
|
ECO_0007565 = "ECO_0007565"
|
|
9536
|
-
IMMUNO_LABELLING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9980
|
+
IMMUNO_LABELLING_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9981
|
+
"ECO_0007565"
|
|
9982
|
+
)
|
|
9537
9983
|
|
|
9538
9984
|
# immunofluorescence super resolution microscopy evidence used in automatic assertion
|
|
9539
9985
|
ECO_0007566 = "ECO_0007566"
|
|
@@ -9549,7 +9995,9 @@ class ECO(str, Enum):
|
|
|
9549
9995
|
|
|
9550
9996
|
# split-ubiquitin functional complementation evidence used in automatic assertion
|
|
9551
9997
|
ECO_0007569 = "ECO_0007569"
|
|
9552
|
-
SPLIT_UBIQUITIN_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
9998
|
+
SPLIT_UBIQUITIN_FUNCTIONAL_COMPLEMENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
9999
|
+
"ECO_0007569"
|
|
10000
|
+
)
|
|
9553
10001
|
|
|
9554
10002
|
# far-Western blotting evidence used in automatic assertion
|
|
9555
10003
|
ECO_0007570 = "ECO_0007570"
|
|
@@ -9581,7 +10029,9 @@ class ECO(str, Enum):
|
|
|
9581
10029
|
|
|
9582
10030
|
# protein-oligonucleotide microarray binding evidence used in automatic assertion
|
|
9583
10031
|
ECO_0007577 = "ECO_0007577"
|
|
9584
|
-
PROTEIN_OLIGONUCLEOTIDE_MICROARRAY_BINDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10032
|
+
PROTEIN_OLIGONUCLEOTIDE_MICROARRAY_BINDING_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10033
|
+
"ECO_0007577"
|
|
10034
|
+
)
|
|
9585
10035
|
|
|
9586
10036
|
# functional complementation evidence used in automatic assertion
|
|
9587
10037
|
ECO_0007578 = "ECO_0007578"
|
|
@@ -9597,7 +10047,9 @@ class ECO(str, Enum):
|
|
|
9597
10047
|
|
|
9598
10048
|
# suppressor/enhancer interaction phenotypic evidence used in automatic assertion
|
|
9599
10049
|
ECO_0007581 = "ECO_0007581"
|
|
9600
|
-
SUPPRESSOR_ENHANCER_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10050
|
+
SUPPRESSOR_ENHANCER_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10051
|
+
"ECO_0007581"
|
|
10052
|
+
)
|
|
9601
10053
|
|
|
9602
10054
|
# double mutant phenotypic evidence used in automatic assertion
|
|
9603
10055
|
ECO_0007582 = "ECO_0007582"
|
|
@@ -9605,7 +10057,9 @@ class ECO(str, Enum):
|
|
|
9605
10057
|
|
|
9606
10058
|
# epistatic interaction phenotypic evidence used in automatic assertion
|
|
9607
10059
|
ECO_0007583 = "ECO_0007583"
|
|
9608
|
-
EPISTATIC_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10060
|
+
EPISTATIC_INTERACTION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10061
|
+
"ECO_0007583"
|
|
10062
|
+
)
|
|
9609
10063
|
|
|
9610
10064
|
# functional complementation in heterologous system evidence used in automatic assertion
|
|
9611
10065
|
ECO_0007584 = "ECO_0007584"
|
|
@@ -9613,7 +10067,9 @@ class ECO(str, Enum):
|
|
|
9613
10067
|
|
|
9614
10068
|
# temperature-sensitive mutant phenotypic evidence used in automatic assertion
|
|
9615
10069
|
ECO_0007585 = "ECO_0007585"
|
|
9616
|
-
TEMPERATURE_SENSITIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10070
|
+
TEMPERATURE_SENSITIVE_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10071
|
+
"ECO_0007585"
|
|
10072
|
+
)
|
|
9617
10073
|
|
|
9618
10074
|
# recessive mutant phenotype evidence used in automatic assertion
|
|
9619
10075
|
ECO_0007586 = "ECO_0007586"
|
|
@@ -9621,7 +10077,9 @@ class ECO(str, Enum):
|
|
|
9621
10077
|
|
|
9622
10078
|
# high throughput mutant phenotypic evidence used in automatic assertion
|
|
9623
10079
|
ECO_0007587 = "ECO_0007587"
|
|
9624
|
-
HIGH_THROUGHPUT_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10080
|
+
HIGH_THROUGHPUT_MUTANT_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10081
|
+
"ECO_0007587"
|
|
10082
|
+
)
|
|
9625
10083
|
|
|
9626
10084
|
# high throughput genetic interaction phenotypic evidence used in automatic assertion
|
|
9627
10085
|
ECO_0007588 = "ECO_0007588"
|
|
@@ -9633,7 +10091,9 @@ class ECO(str, Enum):
|
|
|
9633
10091
|
|
|
9634
10092
|
# high throughput expression pattern evidence used in automatic assertion
|
|
9635
10093
|
ECO_0007590 = "ECO_0007590"
|
|
9636
|
-
HIGH_THROUGHPUT_EXPRESSION_PATTERN_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10094
|
+
HIGH_THROUGHPUT_EXPRESSION_PATTERN_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10095
|
+
"ECO_0007590"
|
|
10096
|
+
)
|
|
9637
10097
|
|
|
9638
10098
|
# radioligand binding assay evidence used in automatic assertion
|
|
9639
10099
|
ECO_0007591 = "ECO_0007591"
|
|
@@ -9677,7 +10137,9 @@ class ECO(str, Enum):
|
|
|
9677
10137
|
|
|
9678
10138
|
# viral hemagglutination inhibition assay evidence used in automatic assertion
|
|
9679
10139
|
ECO_0007601 = "ECO_0007601"
|
|
9680
|
-
VIRAL_HEMAGGLUTINATION_INHIBITION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10140
|
+
VIRAL_HEMAGGLUTINATION_INHIBITION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10141
|
+
"ECO_0007601"
|
|
10142
|
+
)
|
|
9681
10143
|
|
|
9682
10144
|
# compement fixation assay evidence used in automatic assertion
|
|
9683
10145
|
ECO_0007602 = "ECO_0007602"
|
|
@@ -9705,7 +10167,9 @@ class ECO(str, Enum):
|
|
|
9705
10167
|
|
|
9706
10168
|
# transmission electron microscopy evidence used in automatic assertion
|
|
9707
10169
|
ECO_0007608 = "ECO_0007608"
|
|
9708
|
-
TRANSMISSION_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10170
|
+
TRANSMISSION_ELECTRON_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10171
|
+
"ECO_0007608"
|
|
10172
|
+
)
|
|
9709
10173
|
|
|
9710
10174
|
# scanning electron microscopy evidence used in automatic assertion
|
|
9711
10175
|
ECO_0007609 = "ECO_0007609"
|
|
@@ -9721,7 +10185,9 @@ class ECO(str, Enum):
|
|
|
9721
10185
|
|
|
9722
10186
|
# transmitted light brightfied mircoscopy evidence used in automatic assertion
|
|
9723
10187
|
ECO_0007612 = "ECO_0007612"
|
|
9724
|
-
TRANSMITTED_LIGHT_BRIGHTFIED_MIRCOSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10188
|
+
TRANSMITTED_LIGHT_BRIGHTFIED_MIRCOSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10189
|
+
"ECO_0007612"
|
|
10190
|
+
)
|
|
9725
10191
|
|
|
9726
10192
|
# koehler illumination microscopy evidence used in automatic assertion
|
|
9727
10193
|
ECO_0007613 = "ECO_0007613"
|
|
@@ -9733,11 +10199,15 @@ class ECO(str, Enum):
|
|
|
9733
10199
|
|
|
9734
10200
|
# extended field laser confocal microscopy evidence used in automatic assertion
|
|
9735
10201
|
ECO_0007615 = "ECO_0007615"
|
|
9736
|
-
EXTENDED_FIELD_LASER_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10202
|
+
EXTENDED_FIELD_LASER_CONFOCAL_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10203
|
+
"ECO_0007615"
|
|
10204
|
+
)
|
|
9737
10205
|
|
|
9738
10206
|
# confocal laser scanning microscopy evidence used in automatic assertion
|
|
9739
10207
|
ECO_0007616 = "ECO_0007616"
|
|
9740
|
-
CONFOCAL_LASER_SCANNING_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10208
|
+
CONFOCAL_LASER_SCANNING_MICROSCOPY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10209
|
+
"ECO_0007616"
|
|
10210
|
+
)
|
|
9741
10211
|
|
|
9742
10212
|
# light scattering evidence used in automatic assertion
|
|
9743
10213
|
ECO_0007617 = "ECO_0007617"
|
|
@@ -9753,7 +10223,9 @@ class ECO(str, Enum):
|
|
|
9753
10223
|
|
|
9754
10224
|
# colony papillation assay phenotypic evidence used in automatic assertion
|
|
9755
10225
|
ECO_0007620 = "ECO_0007620"
|
|
9756
|
-
COLONY_PAPILLATION_ASSAY_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10226
|
+
COLONY_PAPILLATION_ASSAY_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10227
|
+
"ECO_0007620"
|
|
10228
|
+
)
|
|
9757
10229
|
|
|
9758
10230
|
# crystal violet staining evidence used in automatic assertion
|
|
9759
10231
|
ECO_0007621 = "ECO_0007621"
|
|
@@ -9805,7 +10277,9 @@ class ECO(str, Enum):
|
|
|
9805
10277
|
|
|
9806
10278
|
# transcriptional activation assay evidence used in automatic assertion
|
|
9807
10279
|
ECO_0007633 = "ECO_0007633"
|
|
9808
|
-
TRANSCRIPTIONAL_ACTIVATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10280
|
+
TRANSCRIPTIONAL_ACTIVATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10281
|
+
"ECO_0007633"
|
|
10282
|
+
)
|
|
9809
10283
|
|
|
9810
10284
|
# experimental phenotypic evidence used in manual assertion
|
|
9811
10285
|
ECO_0007634 = "ECO_0007634"
|
|
@@ -9897,7 +10371,9 @@ class ECO(str, Enum):
|
|
|
9897
10371
|
|
|
9898
10372
|
# manually integrated combinatorial experimental evidence used in manual assertion
|
|
9899
10373
|
ECO_0007656 = "ECO_0007656"
|
|
9900
|
-
MANUALLY_INTEGRATED_COMBINATORIAL_EXPERIMENTAL_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
10374
|
+
MANUALLY_INTEGRATED_COMBINATORIAL_EXPERIMENTAL_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
10375
|
+
"ECO_0007656"
|
|
10376
|
+
)
|
|
9901
10377
|
|
|
9902
10378
|
# manually integrated combinatorial experimental evidence used in automatic assertion
|
|
9903
10379
|
ECO_0007657 = "ECO_0007657"
|
|
@@ -9921,7 +10397,9 @@ class ECO(str, Enum):
|
|
|
9921
10397
|
|
|
9922
10398
|
# manually integrated combinatorial computational and experimental evidence
|
|
9923
10399
|
ECO_0007662 = "ECO_0007662"
|
|
9924
|
-
MANUALLY_INTEGRATED_COMBINATORIAL_COMPUTATIONAL_AND_EXPERIMENTAL_EVIDENCE =
|
|
10400
|
+
MANUALLY_INTEGRATED_COMBINATORIAL_COMPUTATIONAL_AND_EXPERIMENTAL_EVIDENCE = (
|
|
10401
|
+
"ECO_0007662"
|
|
10402
|
+
)
|
|
9925
10403
|
|
|
9926
10404
|
# manually integrated combinatorial computational and experimental evidence used in manual assertion
|
|
9927
10405
|
ECO_0007663 = "ECO_0007663"
|
|
@@ -9933,7 +10411,9 @@ class ECO(str, Enum):
|
|
|
9933
10411
|
|
|
9934
10412
|
# automatically integrated combinatorial computational and experimental evidence
|
|
9935
10413
|
ECO_0007665 = "ECO_0007665"
|
|
9936
|
-
AUTOMATICALLY_INTEGRATED_COMBINATORIAL_COMPUTATIONAL_AND_EXPERIMENTAL_EVIDENCE =
|
|
10414
|
+
AUTOMATICALLY_INTEGRATED_COMBINATORIAL_COMPUTATIONAL_AND_EXPERIMENTAL_EVIDENCE = (
|
|
10415
|
+
"ECO_0007665"
|
|
10416
|
+
)
|
|
9937
10417
|
|
|
9938
10418
|
# automatically integrated combinatorial computational and experimental evidence used in manual assertion
|
|
9939
10419
|
ECO_0007666 = "ECO_0007666"
|
|
@@ -9969,7 +10449,9 @@ class ECO(str, Enum):
|
|
|
9969
10449
|
|
|
9970
10450
|
# manually integrated combinatorial evidence used in automatic assertion
|
|
9971
10451
|
ECO_0007676 = "ECO_0007676"
|
|
9972
|
-
MANUALLY_INTEGRATED_COMBINATORIAL_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10452
|
+
MANUALLY_INTEGRATED_COMBINATORIAL_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10453
|
+
"ECO_0007676"
|
|
10454
|
+
)
|
|
9973
10455
|
|
|
9974
10456
|
# combinatorial computational evidence
|
|
9975
10457
|
ECO_0007677 = "ECO_0007677"
|
|
@@ -10049,7 +10531,9 @@ class ECO(str, Enum):
|
|
|
10049
10531
|
|
|
10050
10532
|
# DNA synthesis cell proliferation assay evidence used in manual assertion
|
|
10051
10533
|
ECO_0007697 = "ECO_0007697"
|
|
10052
|
-
DNA_SYNTHESIS_CELL_PROLIFERATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
10534
|
+
DNA_SYNTHESIS_CELL_PROLIFERATION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
10535
|
+
"ECO_0007697"
|
|
10536
|
+
)
|
|
10053
10537
|
|
|
10054
10538
|
# apoptotic assay evidence used in manual assertion
|
|
10055
10539
|
ECO_0007698 = "ECO_0007698"
|
|
@@ -10153,7 +10637,9 @@ class ECO(str, Enum):
|
|
|
10153
10637
|
|
|
10154
10638
|
# in vitro transcription reconstitution assay evidence used in manual assertion
|
|
10155
10639
|
ECO_0007723 = "ECO_0007723"
|
|
10156
|
-
IN_VITRO_TRANSCRIPTION_RECONSTITUTION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
10640
|
+
IN_VITRO_TRANSCRIPTION_RECONSTITUTION_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
10641
|
+
"ECO_0007723"
|
|
10642
|
+
)
|
|
10157
10643
|
|
|
10158
10644
|
# localization evidence used in manual assertion
|
|
10159
10645
|
ECO_0007724 = "ECO_0007724"
|
|
@@ -10193,7 +10679,9 @@ class ECO(str, Enum):
|
|
|
10193
10679
|
|
|
10194
10680
|
# high throughput nucleotide sequencing assay evidence used in manual assertion
|
|
10195
10681
|
ECO_0007734 = "ECO_0007734"
|
|
10196
|
-
HIGH_THROUGHPUT_NUCLEOTIDE_SEQUENCING_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
10682
|
+
HIGH_THROUGHPUT_NUCLEOTIDE_SEQUENCING_ASSAY_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
10683
|
+
"ECO_0007734"
|
|
10684
|
+
)
|
|
10197
10685
|
|
|
10198
10686
|
# structure determination evidence used in manual assertion
|
|
10199
10687
|
ECO_0007735 = "ECO_0007735"
|
|
@@ -10229,7 +10717,9 @@ class ECO(str, Enum):
|
|
|
10229
10717
|
|
|
10230
10718
|
# combinatorial computational and experimental evidence used in manual assertion
|
|
10231
10719
|
ECO_0007744 = "ECO_0007744"
|
|
10232
|
-
COMBINATORIAL_COMPUTATIONAL_AND_EXPERIMENTAL_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
10720
|
+
COMBINATORIAL_COMPUTATIONAL_AND_EXPERIMENTAL_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
10721
|
+
"ECO_0007744"
|
|
10722
|
+
)
|
|
10233
10723
|
|
|
10234
10724
|
# combinatorial experimental evidence used in manual assertion
|
|
10235
10725
|
ECO_0007745 = "ECO_0007745"
|
|
@@ -10273,7 +10763,9 @@ class ECO(str, Enum):
|
|
|
10273
10763
|
|
|
10274
10764
|
# curator inference from MedlinePlus encyclopedia used in manual assertion
|
|
10275
10765
|
ECO_0007755 = "ECO_0007755"
|
|
10276
|
-
CURATOR_INFERENCE_FROM_MEDLINEPLUS_ENCYCLOPEDIA_USED_IN_MANUAL_ASSERTION =
|
|
10766
|
+
CURATOR_INFERENCE_FROM_MEDLINEPLUS_ENCYCLOPEDIA_USED_IN_MANUAL_ASSERTION = (
|
|
10767
|
+
"ECO_0007755"
|
|
10768
|
+
)
|
|
10277
10769
|
|
|
10278
10770
|
# curator inference from Britannica used in manual assertion
|
|
10279
10771
|
ECO_0007756 = "ECO_0007756"
|
|
@@ -10297,7 +10789,9 @@ class ECO(str, Enum):
|
|
|
10297
10789
|
|
|
10298
10790
|
# curator inference from MedlinePlus dictionary used in manual assertion
|
|
10299
10791
|
ECO_0007761 = "ECO_0007761"
|
|
10300
|
-
CURATOR_INFERENCE_FROM_MEDLINEPLUS_DICTIONARY_USED_IN_MANUAL_ASSERTION =
|
|
10792
|
+
CURATOR_INFERENCE_FROM_MEDLINEPLUS_DICTIONARY_USED_IN_MANUAL_ASSERTION = (
|
|
10793
|
+
"ECO_0007761"
|
|
10794
|
+
)
|
|
10301
10795
|
|
|
10302
10796
|
# curator inference from Oxford Dictionary used in manual assertion
|
|
10303
10797
|
ECO_0007762 = "ECO_0007762"
|
|
@@ -10305,7 +10799,9 @@ class ECO(str, Enum):
|
|
|
10305
10799
|
|
|
10306
10800
|
# curator inference from Merriam-Webster Dictionary used in manual assertion
|
|
10307
10801
|
ECO_0007763 = "ECO_0007763"
|
|
10308
|
-
CURATOR_INFERENCE_FROM_MERRIAM_WEBSTER_DICTIONARY_USED_IN_MANUAL_ASSERTION =
|
|
10802
|
+
CURATOR_INFERENCE_FROM_MERRIAM_WEBSTER_DICTIONARY_USED_IN_MANUAL_ASSERTION = (
|
|
10803
|
+
"ECO_0007763"
|
|
10804
|
+
)
|
|
10309
10805
|
|
|
10310
10806
|
# reporter gene assay evidence used in automatic assertion
|
|
10311
10807
|
ECO_0007765 = "ECO_0007765"
|
|
@@ -10353,7 +10849,9 @@ class ECO(str, Enum):
|
|
|
10353
10849
|
|
|
10354
10850
|
# DNA synthesis cell proliferation assay evidence used in automatic assertion
|
|
10355
10851
|
ECO_0007776 = "ECO_0007776"
|
|
10356
|
-
DNA_SYNTHESIS_CELL_PROLIFERATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10852
|
+
DNA_SYNTHESIS_CELL_PROLIFERATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10853
|
+
"ECO_0007776"
|
|
10854
|
+
)
|
|
10357
10855
|
|
|
10358
10856
|
# apoptotic assay evidence used in automatic assertion
|
|
10359
10857
|
ECO_0007777 = "ECO_0007777"
|
|
@@ -10465,7 +10963,9 @@ class ECO(str, Enum):
|
|
|
10465
10963
|
|
|
10466
10964
|
# in vitro transcription reconstitution assay evidence used in automatic assertion
|
|
10467
10965
|
ECO_0007804 = "ECO_0007804"
|
|
10468
|
-
IN_VITRO_TRANSCRIPTION_RECONSTITUTION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10966
|
+
IN_VITRO_TRANSCRIPTION_RECONSTITUTION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10967
|
+
"ECO_0007804"
|
|
10968
|
+
)
|
|
10469
10969
|
|
|
10470
10970
|
# substance quantification evidence used in automatic assertion
|
|
10471
10971
|
ECO_0007805 = "ECO_0007805"
|
|
@@ -10489,7 +10989,9 @@ class ECO(str, Enum):
|
|
|
10489
10989
|
|
|
10490
10990
|
# anatomical perturbation phenotypic evidence used in automatic assertion
|
|
10491
10991
|
ECO_0007810 = "ECO_0007810"
|
|
10492
|
-
ANATOMICAL_PERTURBATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
10992
|
+
ANATOMICAL_PERTURBATION_PHENOTYPIC_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
10993
|
+
"ECO_0007810"
|
|
10994
|
+
)
|
|
10493
10995
|
|
|
10494
10996
|
# cleavage arrested development evidence used in automatic assertion
|
|
10495
10997
|
ECO_0007811 = "ECO_0007811"
|
|
@@ -10505,7 +11007,9 @@ class ECO(str, Enum):
|
|
|
10505
11007
|
|
|
10506
11008
|
# high throughput nucleotide sequencing assay evidence used in automatic assertion
|
|
10507
11009
|
ECO_0007814 = "ECO_0007814"
|
|
10508
|
-
HIGH_THROUGHPUT_NUCLEOTIDE_SEQUENCING_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11010
|
+
HIGH_THROUGHPUT_NUCLEOTIDE_SEQUENCING_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11011
|
+
"ECO_0007814"
|
|
11012
|
+
)
|
|
10509
11013
|
|
|
10510
11014
|
# structure determination evidence used in automatic assertion
|
|
10511
11015
|
ECO_0007815 = "ECO_0007815"
|
|
@@ -10557,7 +11061,9 @@ class ECO(str, Enum):
|
|
|
10557
11061
|
|
|
10558
11062
|
# biological system reconstruction evidence used in automatic assertion
|
|
10559
11063
|
ECO_0007827 = "ECO_0007827"
|
|
10560
|
-
BIOLOGICAL_SYSTEM_RECONSTRUCTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11064
|
+
BIOLOGICAL_SYSTEM_RECONSTRUCTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11065
|
+
"ECO_0007827"
|
|
11066
|
+
)
|
|
10561
11067
|
|
|
10562
11068
|
# biological system reconstruction evidence by experimental evidence used in automatic assertion
|
|
10563
11069
|
ECO_0007828 = "ECO_0007828"
|
|
@@ -10577,7 +11083,9 @@ class ECO(str, Enum):
|
|
|
10577
11083
|
|
|
10578
11084
|
# curator inference from authoritative source used in automatic assertion
|
|
10579
11085
|
ECO_0007833 = "ECO_0007833"
|
|
10580
|
-
CURATOR_INFERENCE_FROM_AUTHORITATIVE_SOURCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11086
|
+
CURATOR_INFERENCE_FROM_AUTHORITATIVE_SOURCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11087
|
+
"ECO_0007833"
|
|
11088
|
+
)
|
|
10581
11089
|
|
|
10582
11090
|
# curator inference from encyclopedia used in automatic assertion
|
|
10583
11091
|
ECO_0007834 = "ECO_0007834"
|
|
@@ -10593,7 +11101,9 @@ class ECO(str, Enum):
|
|
|
10593
11101
|
|
|
10594
11102
|
# curator inference from MedlinePlus encyclopedia used in automatic assertion
|
|
10595
11103
|
ECO_0007837 = "ECO_0007837"
|
|
10596
|
-
CURATOR_INFERENCE_FROM_MEDLINEPLUS_ENCYCLOPEDIA_USED_IN_AUTOMATIC_ASSERTION =
|
|
11104
|
+
CURATOR_INFERENCE_FROM_MEDLINEPLUS_ENCYCLOPEDIA_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11105
|
+
"ECO_0007837"
|
|
11106
|
+
)
|
|
10597
11107
|
|
|
10598
11108
|
# curator inference from book used in automatic assertion
|
|
10599
11109
|
ECO_0007838 = "ECO_0007838"
|
|
@@ -10605,11 +11115,15 @@ class ECO(str, Enum):
|
|
|
10605
11115
|
|
|
10606
11116
|
# curator inference from MedlinePlus dictionary used in automatic assertion
|
|
10607
11117
|
ECO_0007840 = "ECO_0007840"
|
|
10608
|
-
CURATOR_INFERENCE_FROM_MEDLINEPLUS_DICTIONARY_USED_IN_AUTOMATIC_ASSERTION =
|
|
11118
|
+
CURATOR_INFERENCE_FROM_MEDLINEPLUS_DICTIONARY_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11119
|
+
"ECO_0007840"
|
|
11120
|
+
)
|
|
10609
11121
|
|
|
10610
11122
|
# curator inference from Merriam-Webster Dictionary used in automatic assertion
|
|
10611
11123
|
ECO_0007841 = "ECO_0007841"
|
|
10612
|
-
CURATOR_INFERENCE_FROM_MERRIAM_WEBSTER_DICTIONARY_USED_IN_AUTOMATIC_ASSERTION =
|
|
11124
|
+
CURATOR_INFERENCE_FROM_MERRIAM_WEBSTER_DICTIONARY_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11125
|
+
"ECO_0007841"
|
|
11126
|
+
)
|
|
10613
11127
|
|
|
10614
11128
|
# curator inference from Oxford Dictionary used in automatic assertion
|
|
10615
11129
|
ECO_0007842 = "ECO_0007842"
|
|
@@ -10617,7 +11131,9 @@ class ECO(str, Enum):
|
|
|
10617
11131
|
|
|
10618
11132
|
# curator inference from journal publication used in automatic assertion
|
|
10619
11133
|
ECO_0007843 = "ECO_0007843"
|
|
10620
|
-
CURATOR_INFERENCE_FROM_JOURNAL_PUBLICATION_USED_IN_AUTOMATIC_ASSERTION =
|
|
11134
|
+
CURATOR_INFERENCE_FROM_JOURNAL_PUBLICATION_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11135
|
+
"ECO_0007843"
|
|
11136
|
+
)
|
|
10621
11137
|
|
|
10622
11138
|
# radioisotope quantification assay evidence
|
|
10623
11139
|
ECO_0007844 = "ECO_0007844"
|
|
@@ -10625,7 +11141,9 @@ class ECO(str, Enum):
|
|
|
10625
11141
|
|
|
10626
11142
|
# radioisotope quantification assay evidence used in automatic assertion
|
|
10627
11143
|
ECO_0007845 = "ECO_0007845"
|
|
10628
|
-
RADIOISOTOPE_QUANTIFICATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11144
|
+
RADIOISOTOPE_QUANTIFICATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11145
|
+
"ECO_0007845"
|
|
11146
|
+
)
|
|
10629
11147
|
|
|
10630
11148
|
# radioisotope quantification assay evidence used in manual assertion
|
|
10631
11149
|
ECO_0007846 = "ECO_0007846"
|
|
@@ -10637,7 +11155,9 @@ class ECO(str, Enum):
|
|
|
10637
11155
|
|
|
10638
11156
|
# fluorescence quantification assay evidence used in automatic assertion
|
|
10639
11157
|
ECO_0007848 = "ECO_0007848"
|
|
10640
|
-
FLUORESCENCE_QUANTIFICATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11158
|
+
FLUORESCENCE_QUANTIFICATION_ASSAY_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11159
|
+
"ECO_0007848"
|
|
11160
|
+
)
|
|
10641
11161
|
|
|
10642
11162
|
# fluorescence quantification assay evidence used in manual assertion
|
|
10643
11163
|
ECO_0007849 = "ECO_0007849"
|
|
@@ -10669,11 +11189,15 @@ class ECO(str, Enum):
|
|
|
10669
11189
|
|
|
10670
11190
|
# deep learning neural network method evidence used in manual assertion
|
|
10671
11191
|
ECO_0008005 = "ECO_0008005"
|
|
10672
|
-
DEEP_LEARNING_NEURAL_NETWORK_METHOD_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
11192
|
+
DEEP_LEARNING_NEURAL_NETWORK_METHOD_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
11193
|
+
"ECO_0008005"
|
|
11194
|
+
)
|
|
10673
11195
|
|
|
10674
11196
|
# deep learning neural network method evidence used in automatic assertion
|
|
10675
11197
|
ECO_0008006 = "ECO_0008006"
|
|
10676
|
-
DEEP_LEARNING_NEURAL_NETWORK_METHOD_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11198
|
+
DEEP_LEARNING_NEURAL_NETWORK_METHOD_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11199
|
+
"ECO_0008006"
|
|
11200
|
+
)
|
|
10677
11201
|
|
|
10678
11202
|
# rule-based machine learning method evidence used in manual assertion
|
|
10679
11203
|
ECO_0008007 = "ECO_0008007"
|
|
@@ -10681,7 +11205,9 @@ class ECO(str, Enum):
|
|
|
10681
11205
|
|
|
10682
11206
|
# rule-based machine learning method evidence used in automatic assertion
|
|
10683
11207
|
ECO_0008008 = "ECO_0008008"
|
|
10684
|
-
RULE_BASED_MACHINE_LEARNING_METHOD_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11208
|
+
RULE_BASED_MACHINE_LEARNING_METHOD_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11209
|
+
"ECO_0008008"
|
|
11210
|
+
)
|
|
10685
11211
|
|
|
10686
11212
|
# single molecule fluorescence in situ hybridization evidence
|
|
10687
11213
|
ECO_0008009 = "ECO_0008009"
|
|
@@ -10709,7 +11235,9 @@ class ECO(str, Enum):
|
|
|
10709
11235
|
|
|
10710
11236
|
# inference of intermediate molecular structure from structure of final molecule
|
|
10711
11237
|
ECO_0008015 = "ECO_0008015"
|
|
10712
|
-
INFERENCE_OF_INTERMEDIATE_MOLECULAR_STRUCTURE_FROM_STRUCTURE_OF_FINAL_MOLECULE =
|
|
11238
|
+
INFERENCE_OF_INTERMEDIATE_MOLECULAR_STRUCTURE_FROM_STRUCTURE_OF_FINAL_MOLECULE = (
|
|
11239
|
+
"ECO_0008015"
|
|
11240
|
+
)
|
|
10713
11241
|
|
|
10714
11242
|
# single molecule fluorescence in situ hybridization evidence used in manual assertion
|
|
10715
11243
|
ECO_0008016 = "ECO_0008016"
|
|
@@ -10753,11 +11281,15 @@ class ECO(str, Enum):
|
|
|
10753
11281
|
|
|
10754
11282
|
# coordinate mapping to geographic property shapefiles used in manual assertion
|
|
10755
11283
|
ECO_0008026 = "ECO_0008026"
|
|
10756
|
-
COORDINATE_MAPPING_TO_GEOGRAPHIC_PROPERTY_SHAPEFILES_USED_IN_MANUAL_ASSERTION =
|
|
11284
|
+
COORDINATE_MAPPING_TO_GEOGRAPHIC_PROPERTY_SHAPEFILES_USED_IN_MANUAL_ASSERTION = (
|
|
11285
|
+
"ECO_0008026"
|
|
11286
|
+
)
|
|
10757
11287
|
|
|
10758
11288
|
# coordinate mapping to geographic property shapefiles used in automatic assertion
|
|
10759
11289
|
ECO_0008027 = "ECO_0008027"
|
|
10760
|
-
COORDINATE_MAPPING_TO_GEOGRAPHIC_PROPERTY_SHAPEFILES_USED_IN_AUTOMATIC_ASSERTION =
|
|
11290
|
+
COORDINATE_MAPPING_TO_GEOGRAPHIC_PROPERTY_SHAPEFILES_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11291
|
+
"ECO_0008027"
|
|
11292
|
+
)
|
|
10761
11293
|
|
|
10762
11294
|
# inference of intermediate molecular structure from structure of final molecule used in manual assertion
|
|
10763
11295
|
ECO_0008028 = "ECO_0008028"
|
|
@@ -10789,7 +11321,9 @@ class ECO(str, Enum):
|
|
|
10789
11321
|
|
|
10790
11322
|
# author inference based on intrinsic disorder prediction used in manual assertion
|
|
10791
11323
|
ECO_0008035 = "ECO_0008035"
|
|
10792
|
-
AUTHOR_INFERENCE_BASED_ON_INTRINSIC_DISORDER_PREDICTION_USED_IN_MANUAL_ASSERTION =
|
|
11324
|
+
AUTHOR_INFERENCE_BASED_ON_INTRINSIC_DISORDER_PREDICTION_USED_IN_MANUAL_ASSERTION = (
|
|
11325
|
+
"ECO_0008035"
|
|
11326
|
+
)
|
|
10793
11327
|
|
|
10794
11328
|
# author inference based on intrinsic disorder prediction used in automatic assertion
|
|
10795
11329
|
ECO_0008036 = "ECO_0008036"
|
|
@@ -10997,11 +11531,15 @@ class ECO(str, Enum):
|
|
|
10997
11531
|
|
|
10998
11532
|
# antibody-specificity based MHC presentation evidence used in manual assertion
|
|
10999
11533
|
ECO_0008087 = "ECO_0008087"
|
|
11000
|
-
ANTIBODY_SPECIFICITY_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
11534
|
+
ANTIBODY_SPECIFICITY_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
11535
|
+
"ECO_0008087"
|
|
11536
|
+
)
|
|
11001
11537
|
|
|
11002
11538
|
# antibody-specificity based MHC presentation evidence used in automatic assertion
|
|
11003
11539
|
ECO_0008088 = "ECO_0008088"
|
|
11004
|
-
ANTIBODY_SPECIFICITY_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11540
|
+
ANTIBODY_SPECIFICITY_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11541
|
+
"ECO_0008088"
|
|
11542
|
+
)
|
|
11005
11543
|
|
|
11006
11544
|
# antibody 10.3.6-specificity based MHC presentation evidence used in manual assertion
|
|
11007
11545
|
ECO_0008089 = "ECO_0008089"
|
|
@@ -11309,11 +11847,15 @@ class ECO(str, Enum):
|
|
|
11309
11847
|
|
|
11310
11848
|
# protein expression-based MHC presentation evidence used in manual assertion
|
|
11311
11849
|
ECO_0008165 = "ECO_0008165"
|
|
11312
|
-
PROTEIN_EXPRESSION_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
11850
|
+
PROTEIN_EXPRESSION_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
11851
|
+
"ECO_0008165"
|
|
11852
|
+
)
|
|
11313
11853
|
|
|
11314
11854
|
# protein expression-based MHC presentation evidence used in automatic assertion
|
|
11315
11855
|
ECO_0008166 = "ECO_0008166"
|
|
11316
|
-
PROTEIN_EXPRESSION_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11856
|
+
PROTEIN_EXPRESSION_BASED_MHC_PRESENTATION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11857
|
+
"ECO_0008166"
|
|
11858
|
+
)
|
|
11317
11859
|
|
|
11318
11860
|
# specific MHC protein expression-based MHC presentation evidence used in manual assertion
|
|
11319
11861
|
ECO_0008167 = "ECO_0008167"
|
|
@@ -11325,11 +11867,15 @@ class ECO(str, Enum):
|
|
|
11325
11867
|
|
|
11326
11868
|
# MHC:ligand binding based MHC restriction evidence used in manual assertion
|
|
11327
11869
|
ECO_0008169 = "ECO_0008169"
|
|
11328
|
-
MHC_LIGAND_BINDING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
11870
|
+
MHC_LIGAND_BINDING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
11871
|
+
"ECO_0008169"
|
|
11872
|
+
)
|
|
11329
11873
|
|
|
11330
11874
|
# MHC:ligand binding based MHC restriction evidence used in automatic assertion
|
|
11331
11875
|
ECO_0008170 = "ECO_0008170"
|
|
11332
|
-
MHC_LIGAND_BINDING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11876
|
+
MHC_LIGAND_BINDING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11877
|
+
"ECO_0008170"
|
|
11878
|
+
)
|
|
11333
11879
|
|
|
11334
11880
|
# MHC complex binding prediction based MHC restriction evidence used in manual assertion
|
|
11335
11881
|
ECO_0008171 = "ECO_0008171"
|
|
@@ -11357,19 +11903,27 @@ class ECO(str, Enum):
|
|
|
11357
11903
|
|
|
11358
11904
|
# MHC-specific blocking based MHC restriction evidence used in manual assertion
|
|
11359
11905
|
ECO_0008177 = "ECO_0008177"
|
|
11360
|
-
MHC_SPECIFIC_BLOCKING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
11906
|
+
MHC_SPECIFIC_BLOCKING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
11907
|
+
"ECO_0008177"
|
|
11908
|
+
)
|
|
11361
11909
|
|
|
11362
11910
|
# MHC-specific blocking based MHC restriction evidence used in automatic assertion
|
|
11363
11911
|
ECO_0008178 = "ECO_0008178"
|
|
11364
|
-
MHC_SPECIFIC_BLOCKING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11912
|
+
MHC_SPECIFIC_BLOCKING_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11913
|
+
"ECO_0008178"
|
|
11914
|
+
)
|
|
11365
11915
|
|
|
11366
11916
|
# specific MHC molecule based MHC restriction evidence used in manual assertion
|
|
11367
11917
|
ECO_0008179 = "ECO_0008179"
|
|
11368
|
-
SPECIFIC_MHC_MOLECULE_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_MANUAL_ASSERTION =
|
|
11918
|
+
SPECIFIC_MHC_MOLECULE_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_MANUAL_ASSERTION = (
|
|
11919
|
+
"ECO_0008179"
|
|
11920
|
+
)
|
|
11369
11921
|
|
|
11370
11922
|
# specific MHC molecule based MHC restriction evidence used in automatic assertion
|
|
11371
11923
|
ECO_0008180 = "ECO_0008180"
|
|
11372
|
-
SPECIFIC_MHC_MOLECULE_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11924
|
+
SPECIFIC_MHC_MOLECULE_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11925
|
+
"ECO_0008180"
|
|
11926
|
+
)
|
|
11373
11927
|
|
|
11374
11928
|
# T cell type based MHC restriction evidence used in manual assertion
|
|
11375
11929
|
ECO_0008181 = "ECO_0008181"
|
|
@@ -11377,7 +11931,9 @@ class ECO(str, Enum):
|
|
|
11377
11931
|
|
|
11378
11932
|
# T cell type based MHC restriction evidence used in automatic assertion
|
|
11379
11933
|
ECO_0008182 = "ECO_0008182"
|
|
11380
|
-
T_CELL_TYPE_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION =
|
|
11934
|
+
T_CELL_TYPE_BASED_MHC_RESTRICTION_EVIDENCE_USED_IN_AUTOMATIC_ASSERTION = (
|
|
11935
|
+
"ECO_0008182"
|
|
11936
|
+
)
|
|
11381
11937
|
|
|
11382
11938
|
# DNA catabolic process, endonucleolytic
|
|
11383
11939
|
GO_0000737 = "GO_0000737"
|
|
@@ -11617,7 +12173,9 @@ class ECO(str, Enum):
|
|
|
11617
12173
|
|
|
11618
12174
|
# cellular component disassembly involved in execution phase of apoptosis
|
|
11619
12175
|
GO_0006921 = "GO_0006921"
|
|
11620
|
-
CELLULAR_COMPONENT_DISASSEMBLY_INVOLVED_IN_EXECUTION_PHASE_OF_APOPTOSIS =
|
|
12176
|
+
CELLULAR_COMPONENT_DISASSEMBLY_INVOLVED_IN_EXECUTION_PHASE_OF_APOPTOSIS = (
|
|
12177
|
+
"GO_0006921"
|
|
12178
|
+
)
|
|
11621
12179
|
|
|
11622
12180
|
# movement of cell or subcellular component
|
|
11623
12181
|
GO_0006928 = "GO_0006928"
|
|
@@ -12685,11 +13243,15 @@ class ECO(str, Enum):
|
|
|
12685
13243
|
|
|
12686
13244
|
# negative regulation of nucleobase-containing compound metabolic process
|
|
12687
13245
|
GO_0045934 = "GO_0045934"
|
|
12688
|
-
NEGATIVE_REGULATION_OF_NUCLEOBASE_CONTAINING_COMPOUND_METABOLIC_PROCESS =
|
|
13246
|
+
NEGATIVE_REGULATION_OF_NUCLEOBASE_CONTAINING_COMPOUND_METABOLIC_PROCESS = (
|
|
13247
|
+
"GO_0045934"
|
|
13248
|
+
)
|
|
12689
13249
|
|
|
12690
13250
|
# positive regulation of nucleobase-containing compound metabolic process
|
|
12691
13251
|
GO_0045935 = "GO_0045935"
|
|
12692
|
-
POSITIVE_REGULATION_OF_NUCLEOBASE_CONTAINING_COMPOUND_METABOLIC_PROCESS =
|
|
13252
|
+
POSITIVE_REGULATION_OF_NUCLEOBASE_CONTAINING_COMPOUND_METABOLIC_PROCESS = (
|
|
13253
|
+
"GO_0045935"
|
|
13254
|
+
)
|
|
12693
13255
|
|
|
12694
13256
|
# heterocycle metabolic process
|
|
12695
13257
|
GO_0046483 = "GO_0046483"
|
|
@@ -13249,11 +13811,15 @@ class ECO(str, Enum):
|
|
|
13249
13811
|
|
|
13250
13812
|
# negative regulation of plasma membrane bounded cell projection assembly
|
|
13251
13813
|
GO_0120033 = "GO_0120033"
|
|
13252
|
-
NEGATIVE_REGULATION_OF_PLASMA_MEMBRANE_BOUNDED_CELL_PROJECTION_ASSEMBLY =
|
|
13814
|
+
NEGATIVE_REGULATION_OF_PLASMA_MEMBRANE_BOUNDED_CELL_PROJECTION_ASSEMBLY = (
|
|
13815
|
+
"GO_0120033"
|
|
13816
|
+
)
|
|
13253
13817
|
|
|
13254
13818
|
# positive regulation of plasma membrane bounded cell projection assembly
|
|
13255
13819
|
GO_0120034 = "GO_0120034"
|
|
13256
|
-
POSITIVE_REGULATION_OF_PLASMA_MEMBRANE_BOUNDED_CELL_PROJECTION_ASSEMBLY =
|
|
13820
|
+
POSITIVE_REGULATION_OF_PLASMA_MEMBRANE_BOUNDED_CELL_PROJECTION_ASSEMBLY = (
|
|
13821
|
+
"GO_0120034"
|
|
13822
|
+
)
|
|
13257
13823
|
|
|
13258
13824
|
# regulation of plasma membrane bounded cell projection organization
|
|
13259
13825
|
GO_0120035 = "GO_0120035"
|
|
@@ -13429,11 +13995,15 @@ class ECO(str, Enum):
|
|
|
13429
13995
|
|
|
13430
13996
|
# negative regulation of tumor necrosis factor superfamily cytokine production
|
|
13431
13997
|
GO_1903556 = "GO_1903556"
|
|
13432
|
-
NEGATIVE_REGULATION_OF_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION =
|
|
13998
|
+
NEGATIVE_REGULATION_OF_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION = (
|
|
13999
|
+
"GO_1903556"
|
|
14000
|
+
)
|
|
13433
14001
|
|
|
13434
14002
|
# positive regulation of tumor necrosis factor superfamily cytokine production
|
|
13435
14003
|
GO_1903557 = "GO_1903557"
|
|
13436
|
-
POSITIVE_REGULATION_OF_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION =
|
|
14004
|
+
POSITIVE_REGULATION_OF_TUMOR_NECROSIS_FACTOR_SUPERFAMILY_CYTOKINE_PRODUCTION = (
|
|
14005
|
+
"GO_1903557"
|
|
14006
|
+
)
|
|
13437
14007
|
|
|
13438
14008
|
# regulation of DNA catabolic process
|
|
13439
14009
|
GO_1903624 = "GO_1903624"
|
|
@@ -14325,7 +14895,9 @@ class ECO(str, Enum):
|
|
|
14325
14895
|
|
|
14326
14896
|
# detection of specific nucleic acid polymers with complementary probes
|
|
14327
14897
|
OBI_0000874 = "OBI_0000874"
|
|
14328
|
-
DETECTION_OF_SPECIFIC_NUCLEIC_ACID_POLYMERS_WITH_COMPLEMENTARY_PROBES =
|
|
14898
|
+
DETECTION_OF_SPECIFIC_NUCLEIC_ACID_POLYMERS_WITH_COMPLEMENTARY_PROBES = (
|
|
14899
|
+
"OBI_0000874"
|
|
14900
|
+
)
|
|
14329
14901
|
|
|
14330
14902
|
# RNA extract
|
|
14331
14903
|
OBI_0000880 = "OBI_0000880"
|
|
@@ -14853,11 +15425,15 @@ class ECO(str, Enum):
|
|
|
14853
15425
|
|
|
14854
15426
|
# assay measuring a binding constant of a B cell epitope:antibody complex
|
|
14855
15427
|
OBI_0001709 = "OBI_0001709"
|
|
14856
|
-
ASSAY_MEASURING_A_BINDING_CONSTANT_OF_A_B_CELL_EPITOPE_ANTIBODY_COMPLEX =
|
|
15428
|
+
ASSAY_MEASURING_A_BINDING_CONSTANT_OF_A_B_CELL_EPITOPE_ANTIBODY_COMPLEX = (
|
|
15429
|
+
"OBI_0001709"
|
|
15430
|
+
)
|
|
14857
15431
|
|
|
14858
15432
|
# 3D molecular structure determination assay of an antigen:antibody complex
|
|
14859
15433
|
OBI_0001721 = "OBI_0001721"
|
|
14860
|
-
_3D_MOLECULAR_STRUCTURE_DETERMINATION_ASSAY_OF_AN_ANTIGEN_ANTIBODY_COMPLEX =
|
|
15434
|
+
_3D_MOLECULAR_STRUCTURE_DETERMINATION_ASSAY_OF_AN_ANTIGEN_ANTIBODY_COMPLEX = (
|
|
15435
|
+
"OBI_0001721"
|
|
15436
|
+
)
|
|
14861
15437
|
|
|
14862
15438
|
# X-ray crystallography assay determining the 3D structure of a B cell epitope:antibody complex
|
|
14863
15439
|
OBI_0001738 = "OBI_0001738"
|
|
@@ -14953,7 +15529,9 @@ class ECO(str, Enum):
|
|
|
14953
15529
|
|
|
14954
15530
|
# 3D molecular structure determination assay of a T cell epitope:MHC:TCR complex
|
|
14955
15531
|
OBI_0001999 = "OBI_0001999"
|
|
14956
|
-
_3D_MOLECULAR_STRUCTURE_DETERMINATION_ASSAY_OF_A_T_CELL_EPITOPE_MHC_TCR_COMPLEX =
|
|
15532
|
+
_3D_MOLECULAR_STRUCTURE_DETERMINATION_ASSAY_OF_A_T_CELL_EPITOPE_MHC_TCR_COMPLEX = (
|
|
15533
|
+
"OBI_0001999"
|
|
15534
|
+
)
|
|
14957
15535
|
|
|
14958
15536
|
# epigenetic modification assay
|
|
14959
15537
|
OBI_0002020 = "OBI_0002020"
|
|
@@ -14973,7 +15551,9 @@ class ECO(str, Enum):
|
|
|
14973
15551
|
|
|
14974
15552
|
# assay measuring a binding constant of a T cell epitope:MHC:TCR complex
|
|
14975
15553
|
OBI_0002059 = "OBI_0002059"
|
|
14976
|
-
ASSAY_MEASURING_A_BINDING_CONSTANT_OF_A_T_CELL_EPITOPE_MHC_TCR_COMPLEX =
|
|
15554
|
+
ASSAY_MEASURING_A_BINDING_CONSTANT_OF_A_T_CELL_EPITOPE_MHC_TCR_COMPLEX = (
|
|
15555
|
+
"OBI_0002059"
|
|
15556
|
+
)
|
|
14977
15557
|
|
|
14978
15558
|
# MHC ligand assay
|
|
14979
15559
|
OBI_0002075 = "OBI_0002075"
|
|
@@ -15792,7 +16372,7 @@ class ECO(str, Enum):
|
|
|
15792
16372
|
USES = "uses"
|
|
15793
16373
|
|
|
15794
16374
|
@staticmethod
|
|
15795
|
-
def get_name(eco:
|
|
16375
|
+
def get_name(eco: "ECO") -> Optional[str]:
|
|
15796
16376
|
"""Get name for term.
|
|
15797
16377
|
|
|
15798
16378
|
:returns: None if term does not exist in ontology.
|
|
@@ -15800,9 +16380,9 @@ class ECO(str, Enum):
|
|
|
15800
16380
|
return _terms.get(eco.value, None)
|
|
15801
16381
|
|
|
15802
16382
|
@classmethod
|
|
15803
|
-
def validate(cls, eco:
|
|
16383
|
+
def validate(cls, eco: "ECOType") -> "ECO":
|
|
15804
16384
|
"""Validate and normalize eco."""
|
|
15805
|
-
term:
|
|
16385
|
+
term: "ECO"
|
|
15806
16386
|
if isinstance(eco, str):
|
|
15807
16387
|
if not eco.startswith("ECO"):
|
|
15808
16388
|
raise ValueError(eco + " is not a ECO id.")
|
|
@@ -15811,14 +16391,15 @@ class ECO(str, Enum):
|
|
|
15811
16391
|
|
|
15812
16392
|
term = getattr(cls, eco)
|
|
15813
16393
|
|
|
15814
|
-
elif isinstance(eco,
|
|
16394
|
+
elif isinstance(eco, "ECO"):
|
|
15815
16395
|
term = eco
|
|
15816
16396
|
else:
|
|
15817
16397
|
raise ValueError
|
|
15818
16398
|
|
|
15819
16399
|
return term
|
|
15820
16400
|
|
|
16401
|
+
|
|
15821
16402
|
__all__ = [
|
|
15822
16403
|
"ECO",
|
|
15823
16404
|
"ECOType",
|
|
15824
|
-
]
|
|
16405
|
+
]
|