pymetadata 0.5.0__py3-none-any.whl
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- pymetadata/__init__.py +14 -0
- pymetadata/cache.py +52 -0
- pymetadata/chebi.py +92 -0
- pymetadata/console.py +18 -0
- pymetadata/core/__init__.py +1 -0
- pymetadata/core/annotation.py +396 -0
- pymetadata/core/creator.py +46 -0
- pymetadata/core/synonym.py +12 -0
- pymetadata/core/xref.py +66 -0
- pymetadata/examples/__init__.py +1 -0
- pymetadata/examples/cache_path_example.py +15 -0
- pymetadata/examples/omex_example.py +46 -0
- pymetadata/examples/results/test_from_files.omex +0 -0
- pymetadata/examples/results/test_from_omex.omex +0 -0
- pymetadata/examples/results/testomex/README.md +3 -0
- pymetadata/examples/results/testomex/manifest.xml +9 -0
- pymetadata/examples/results/testomex/models/omex_comp.xml +174 -0
- pymetadata/examples/results/testomex/models/omex_comp_flat.xml +215 -0
- pymetadata/examples/results/testomex/models/omex_minimal.xml +99 -0
- pymetadata/examples/test.omex +0 -0
- pymetadata/identifiers/__init__.py +1 -0
- pymetadata/identifiers/miriam.py +43 -0
- pymetadata/identifiers/registry.py +397 -0
- pymetadata/log.py +29 -0
- pymetadata/metadata/__init__.py +6 -0
- pymetadata/metadata/eco.py +15918 -0
- pymetadata/metadata/kisao.py +2731 -0
- pymetadata/metadata/sbo.py +3754 -0
- pymetadata/omex.py +771 -0
- pymetadata/omex_v2.py +30 -0
- pymetadata/ontologies/__init__.py +1 -0
- pymetadata/ontologies/ols.py +214 -0
- pymetadata/ontologies/ontology.py +312 -0
- pymetadata/py.typed +0 -0
- pymetadata/resources/chebi_webservice_wsdl.xml +509 -0
- pymetadata/resources/ontologies/README.md +4 -0
- pymetadata/resources/templates/ontology_enum.pytemplate +61 -0
- pymetadata/unichem.py +190 -0
- pymetadata-0.5.0.dist-info/METADATA +154 -0
- pymetadata-0.5.0.dist-info/RECORD +42 -0
- pymetadata-0.5.0.dist-info/WHEEL +4 -0
- pymetadata-0.5.0.dist-info/licenses/LICENSE +7 -0
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"""SBO ontology."""
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from enum import Enum
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from typing import Optional, Union
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SBOType = Union[str, "SBO"]
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_terms = {
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"SBO_0000000": "systems biology representation",
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"SBO_0000001": "rate law",
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"SBO_0000002": "quantitative systems description parameter",
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"SBO_0000003": "participant role",
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"SBO_0000004": "modelling framework",
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"SBO_0000005": "obsolete mathematical expression",
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"SBO_0000006": "obsolete parameter",
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"SBO_0000007": "obsolete participant type",
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"SBO_0000008": "obsolete modelling framework",
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"SBO_0000009": "kinetic constant",
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"SBO_0000010": "reactant",
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"SBO_0000011": "product",
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"SBO_0000012": "mass action rate law",
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"SBO_0000013": "catalyst",
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"SBO_0000014": "enzyme",
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"SBO_0000015": "substrate",
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"SBO_0000016": "unimolecular rate constant",
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"SBO_0000017": "bimolecular rate constant",
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"SBO_0000018": "trimolecular rate constant",
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"SBO_0000019": "modifier",
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"SBO_0000020": "inhibitor",
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"SBO_0000021": "potentiator",
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"SBO_0000022": "forward unimolecular rate constant",
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"SBO_0000023": "forward bimolecular rate constant",
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"SBO_0000024": "forward trimolecular rate constant",
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"SBO_0000025": "catalytic rate constant",
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"SBO_0000026": "new term name",
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"SBO_0000027": "Michaelis constant",
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"SBO_0000028": "enzymatic rate law for irreversible non-modulated non-interacting unireactant enzymes",
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"SBO_0000029": "Henri-Michaelis-Menten rate law",
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"SBO_0000030": "Van Slyke-Cullen rate law",
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"SBO_0000031": "Briggs-Haldane rate law",
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"SBO_0000032": "reverse unimolecular rate constant",
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"SBO_0000033": "reverse bimolecular rate constant",
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"SBO_0000034": "reverse trimolecular rate constant",
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"SBO_0000035": "forward unimolecular rate constant, continuous case",
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"SBO_0000036": "forward bimolecular rate constant, continuous case",
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"SBO_0000037": "forward trimolecular rate constant, continuous case",
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"SBO_0000038": "reverse unimolecular rate constant, continuous case",
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"SBO_0000039": "reverse bimolecular rate constant, continuous case",
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"SBO_0000040": "reverse trimolecular rate constant, continuous case",
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"SBO_0000041": "mass action rate law for irreversible reactions",
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"SBO_0000042": "mass action rate law for reversible reactions",
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"SBO_0000043": "mass action rate law for zeroth order irreversible reactions",
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"SBO_0000044": "mass action rate law for first order irreversible reactions",
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"SBO_0000045": "mass action rate law for second order irreversible reactions",
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"SBO_0000046": "zeroth order rate constant",
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"SBO_0000047": "mass action rate law for zeroth order irreversible reactions, continuous scheme",
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"SBO_0000048": "forward zeroth order rate constant, continuous case",
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"SBO_0000049": "mass action rate law for first order irreversible reactions, continuous scheme",
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"SBO_0000050": "mass action rate law for second order irreversible reactions, one reactant",
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"SBO_0000052": "mass action rate law for second order irreversible reactions, one reactant, continuous scheme",
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"SBO_0000053": "mass action rate law for second order irreversible reactions, two reactants",
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"SBO_0000054": "mass action rate law for second order irreversible reactions, two reactants, continuous scheme",
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"SBO_0000055": "mass action rate law for third order irreversible reactions",
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"SBO_0000056": "mass action rate law for third order irreversible reactions, one reactant",
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"SBO_0000057": "mass action rate law for third order irreversible reactions, one reactant, continuous scheme",
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"SBO_0000058": "mass action rate law for third order irreversible reactions, two reactants",
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"SBO_0000059": "mass action rate law for third order irreversible reactions, two reactants, continuous scheme",
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"SBO_0000060": "mass action rate law for third order irreversible reactions, three reactants",
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"SBO_0000061": "mass action rate law for third order irreversible reactions, three reactants, continuous scheme",
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"SBO_0000062": "continuous framework",
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"SBO_0000063": "discrete framework",
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"SBO_0000064": "mathematical expression",
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"SBO_0000065": "forward zeroth order rate constant, discrete case",
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"SBO_0000066": "forward unimolecular rate constant, discrete case",
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"SBO_0000067": "forward bimolecular rate constant, discrete case",
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"SBO_0000068": "forward trimolecular rate constant, discrete case",
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"SBO_0000069": "mass action rate law for zeroth order reversible reactions",
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"SBO_0000070": "mass action rate law for zeroth order forward, first order reverse, reversible reactions, continuous scheme",
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"SBO_0000071": "mass action rate law for zeroth order forward, second order reverse, reversible reactions, continuous scheme",
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"SBO_0000072": "mass action rate law for zeroth order forward, second order reverse, reversible reactions, one product, continuous scheme",
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"SBO_0000073": "mass action rate law for zeroth order forward, second order reverse, reversible reactions, two products, continuous scheme",
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"SBO_0000074": "mass action rate law for zeroth order forward, third order reverse, reversible reactions, continuous scheme",
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"SBO_0000075": "mass action rate law for zeroth order forward, third order reverse, reversible reactions, one product, continuous scheme",
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"SBO_0000076": "mass action rate law for zeroth order forward, third order reverse, reversible reactions, two products, continuous scheme",
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"SBO_0000077": "mass action rate law for zeroth order forward, third order reverse, reversible reactions, three products, continuous scheme",
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"SBO_0000078": "mass action rate law for first order reversible reactions",
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"SBO_0000079": "mass action rate law for first order forward, zeroth order reverse, reversible reactions, continuous scheme",
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"SBO_0000080": "mass action rate law for first order forward, first order reverse, reversible reactions, continuous scheme",
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"SBO_0000081": "mass action rate law for first order forward, second order reverse, reversible reactions",
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"SBO_0000082": "mass action rate law for first order forward, second order reverse, reversible reactions, one product, continuous scheme",
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"SBO_0000083": "mass action rate law for first order forward, second order reverse, reversible reactions, two products, continuous scheme",
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"SBO_0000084": "mass action rate law for first order forward, third order reverse, reversible reactions",
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"SBO_0000085": "mass action rate law for first order forward, third order reverse, reversible reactions, one product, continuous scheme",
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"SBO_0000086": "mass action rate law for first order forward, third order reverse, reversible reactions, two products, continuous scheme",
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"SBO_0000087": "mass action rate law for first order forward, third order reverse, reversible reactions, three products, continuous scheme",
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"SBO_0000088": "mass action rate law for second order reversible reactions",
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"SBO_0000089": "mass action rate law for second order forward, reversible reactions, one reactant",
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"SBO_0000090": "mass action rate law for second order forward, zeroth order reverse, reversible reactions, one reactant, continuous scheme",
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"SBO_0000091": "mass action rate law for second order forward, first order reverse, reversible reactions, one reactant, continuous scheme",
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"SBO_0000092": "mass action rate law for second order forward, second order reverse, reversible reactions, one reactant",
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"SBO_0000093": "mass action rate law for second order forward, second order reverse, reversible reactions, one reactant, one product, continuous scheme",
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"SBO_0000094": "mass action rate law for second order forward, second order reverse, reversible reactions, two products, continuous scheme",
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"SBO_0000095": "mass action rate law for second order forward, third order reverse, reversible reactions, one reactant",
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"SBO_0000096": "mass action rate law for second order forward, third order reverse, reversible reactions, one reactant, one product, continuous scheme",
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"SBO_0000097": "mass action rate law for second order forward, third order reverse, reversible reactions, one reactant, two products, continuous scheme",
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"SBO_0000098": "mass action rate law for second order forward, third order reverse, reversible reactions, one reactant, three products, continuous scheme",
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"SBO_0000099": "mass action rate law for second order forward, reversible reactions, two reactants",
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"SBO_0000100": "mass action rate law for second order forward, zeroth order reverse, reversible reactions, two reactants, continuous scheme",
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"SBO_0000101": "mass action rate law for second order forward, first order reverse, reversible reactions, two reactants, continuous scheme",
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"SBO_0000102": "mass action rate law for second order forward, second order reverse, reversible reactions, two reactants",
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"SBO_0000103": "mass action rate law for second order forward, second order reverse, reversible reactions, two reactants, one product, continuous scheme",
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"SBO_0000104": "mass action rate law for second order forward, second order reverse, reversible reactions, two reactants, two products, continuous scheme",
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"SBO_0000105": "mass action rate law for second order forward, third order reverse, reversible reactions, two reactants",
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"SBO_0000106": "mass action rate law for second order forward, third order reverse, reversible reactions, two reactants, one product, continuous scheme",
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"SBO_0000107": "mass action rate law for second order forward, third order reverse, reversible reactions, two reactants, two products, continuous scheme",
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"SBO_0000108": "mass action rate law for second order forward, third order reverse, reversible reactions, two reactants, three products, continuous scheme",
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"SBO_0000109": "mass action rate law for third order reversible reactions",
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"SBO_0000110": "mass action rate law for third order forward, reversible reactions, two reactants",
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"SBO_0000111": "mass action rate law for third order forward, zeroth order reverse, reversible reactions, two reactants, continuous scheme",
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"SBO_0000112": "mass action rate law for third order forward, first order reverse, reversible reactions, two reactants, continuous scheme",
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"SBO_0000113": "mass action rate law for third order forward, second order reverse, reversible reactions, two reactants",
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"SBO_0000114": "mass action rate law for third order forward, second order reverse, reversible reactions, two reactants, one product, continuous scheme",
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"SBO_0000115": "mass action rate law for third order forward, second order reverse, reversible reactions, two reactants, two products, continuous scheme",
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"SBO_0000116": "mass action rate law for third order forward, third order reverse, reversible reactions, two reactants",
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"SBO_0000117": "mass action rate law for third order forward, third order reverse, reversible reactions, two reactants, one product, continuous scheme",
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"SBO_0000118": "mass action rate law for third order forward, third order reverse, reversible reactions, two reactants, two products, continuous scheme",
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"SBO_0000119": "mass action rate law for third order forward, third order reverse, reversible reactions, two reactants, three products, continuous scheme",
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"SBO_0000120": "mass action rate law for third order forward, reversible reactions, three reactants",
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"SBO_0000121": "mass action rate law for third order forward, zeroth order reverse, reversible reactions, three reactants, continuous scheme",
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"SBO_0000122": "mass action rate law for third order forward, first order reverse, reversible reactions, three reactants, continuous scheme",
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"SBO_0000123": "mass action rate law for third order forward, second order reverse, reversible reactions, three reactants",
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"SBO_0000124": "mass action rate law for third order forward, second order reverse, reversible reactions, three reactants, one product, continuous scheme",
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"SBO_0000125": "mass action rate law for third order forward, second order reverse, reversible reactions, three reactants, two products, continuous scheme",
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"SBO_0000126": "mass action rate law for third order forward, third order reverse, reversible reactions, three reactants",
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"SBO_0000127": "mass action rate law for third order forward, third order reverse, reversible reactions, three reactants, one product, continuous scheme",
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"SBO_0000128": "mass action rate law for third order forward, third order reverse, reversible reactions, three reactants, two products, continuous scheme",
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"SBO_0000129": "mass action rate law for third order forward, third order reverse, reversible reactions, three reactants, three products, continuous scheme",
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"SBO_0000130": "mass action rate law for third order forward, reversible reactions, one reactant",
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"SBO_0000131": "mass action rate law for third order forward, zeroth order reverse, reversible reactions, one reactant, continuous scheme",
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"SBO_0000132": "mass action rate law for third order forward, first order reverse, reversible reactions, one reactant, continuous scheme",
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"SBO_0000133": "mass action rate law for third order forward, second order reverse, reversible reactions, one reactant",
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"SBO_0000134": "mass action rate law for third order forward, second order reverse, reversible reactions, one reactant, one product, continuous scheme",
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"SBO_0000135": "mass action rate law for third order forward, second order reverse, reversible reactions, one reactant, two products, continuous scheme",
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"SBO_0000136": "mass action rate law for third order forward, third order reverse, reversible reactions, one reactant",
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"SBO_0000137": "mass action rate law for third order forward, third order reverse, reversible reactions, one reactant, one product, continuous scheme",
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"SBO_0000138": "mass action rate law for third order forward, third order reverse, reversible reactions, one reactant, two products, continuous scheme",
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"SBO_0000139": "mass action rate law for third order forward, third order reverse, reversible reactions, one reactant, three products, continuous scheme",
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"SBO_0000140": "mass action rate law for zeroth order irreversible reactions, discrete scheme",
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"SBO_0000141": "mass action rate law for first order irreversible reactions, discrete scheme",
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"SBO_0000142": "mass action rate law for second order irreversible reactions, one reactant, discrete scheme",
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"SBO_0000143": "mass action rate law for second order irreversible reactions, two reactants, discrete scheme",
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"SBO_0000144": "mass action rate law for third order irreversible reactions, one reactant, discrete scheme",
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"SBO_0000145": "mass action rate law for third order irreversible reactions, two reactants, discrete scheme",
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"SBO_0000146": "mass action rate law for third order irreversible reactions, three reactants, discrete scheme",
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"SBO_0000147": "thermodynamic temperature",
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"SBO_0000148": "temperature difference",
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"SBO_0000149": "number of substrates",
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"SBO_0000150": "enzymatic rate law for irreversible non-modulated non-interacting reactant enzymes",
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"SBO_0000151": "enzymatic rate law for irreversible non-modulated non-interacting bireactant enzymes",
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"SBO_0000152": "enzymatic rate law for irreversible non-modulated non-interacting trireactant enzymes",
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"SBO_0000153": "forward rate constant",
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"SBO_0000154": "forward rate constant, continuous case",
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"SBO_0000155": "forward rate constant, discrete case",
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"SBO_0000156": "reverse rate constant",
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"SBO_0000157": "number of reactants",
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"SBO_0000158": "order of a reaction with respect to a reactant",
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"SBO_0000159": "non-integral order rate constant",
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"SBO_0000160": "forward non-integral order rate constant",
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"SBO_0000161": "reverse non-integral order rate constant",
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"SBO_0000162": "forward zeroth order rate constant",
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"SBO_0000163": "mass action rate law for irreversible reactions, continuous scheme",
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"SBO_0000164": "second order irreversible mass action kinetics, continuous scheme",
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"SBO_0000165": "third order irreversible mass action kinetics, continuous scheme",
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"SBO_0000166": "mass action rate law for irreversible reactions, discrete scheme",
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"SBO_0000167": "biochemical or transport reaction",
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"SBO_0000168": "control",
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"SBO_0000169": "inhibition",
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"SBO_0000170": "stimulation",
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"SBO_0000171": "necessary stimulation",
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"SBO_0000172": "catalysis",
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"SBO_0000173": "and",
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"SBO_0000174": "or",
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"SBO_0000175": "xor",
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"SBO_0000176": "biochemical reaction",
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"SBO_0000177": "non-covalent binding",
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"SBO_0000178": "cleavage",
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"SBO_0000179": "degradation",
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"SBO_0000180": "dissociation",
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"SBO_0000181": "conformational transition",
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"SBO_0000182": "conversion",
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+
"SBO_0000183": "transcription",
|
|
193
|
+
"SBO_0000184": "translation",
|
|
194
|
+
"SBO_0000185": "translocation reaction",
|
|
195
|
+
"SBO_0000186": "maximal velocity",
|
|
196
|
+
"SBO_0000187": "Henri-Michaelis-Menten equation, Vmax form",
|
|
197
|
+
"SBO_0000188": "number of biochemical items",
|
|
198
|
+
"SBO_0000189": "number of binding sites",
|
|
199
|
+
"SBO_0000190": "Hill coefficient",
|
|
200
|
+
"SBO_0000191": "Hill constant",
|
|
201
|
+
"SBO_0000192": "Hill-type rate law, generalised form",
|
|
202
|
+
"SBO_0000193": "equilibrium or steady-state constant",
|
|
203
|
+
"SBO_0000194": "pseudo-dissociation constant",
|
|
204
|
+
"SBO_0000195": "Hill-type rate law, microscopic form",
|
|
205
|
+
"SBO_0000196": "concentration of an entity pool",
|
|
206
|
+
"SBO_0000197": "specific concentration of an entity",
|
|
207
|
+
"SBO_0000198": "Hill-type rate law, reduced form",
|
|
208
|
+
"SBO_0000199": "normalised enzymatic rate law for unireactant enzymes",
|
|
209
|
+
"SBO_0000200": "redox reaction",
|
|
210
|
+
"SBO_0000201": "oxidation",
|
|
211
|
+
"SBO_0000202": "reduction",
|
|
212
|
+
"SBO_0000203": "duplication",
|
|
213
|
+
"SBO_0000204": "DNA replication",
|
|
214
|
+
"SBO_0000205": "composite biochemical process",
|
|
215
|
+
"SBO_0000206": "competitive inhibitor",
|
|
216
|
+
"SBO_0000207": "non-competitive inhibitor",
|
|
217
|
+
"SBO_0000208": "acid-base reaction",
|
|
218
|
+
"SBO_0000209": "ionisation",
|
|
219
|
+
"SBO_0000210": "addition of a chemical group",
|
|
220
|
+
"SBO_0000211": "removal of a chemical group",
|
|
221
|
+
"SBO_0000212": "protonation",
|
|
222
|
+
"SBO_0000213": "deprotonation",
|
|
223
|
+
"SBO_0000214": "methylation",
|
|
224
|
+
"SBO_0000215": "acetylation",
|
|
225
|
+
"SBO_0000216": "phosphorylation",
|
|
226
|
+
"SBO_0000217": "glycosylation",
|
|
227
|
+
"SBO_0000218": "palmitoylation",
|
|
228
|
+
"SBO_0000219": "myristoylation",
|
|
229
|
+
"SBO_0000220": "sulfation",
|
|
230
|
+
"SBO_0000221": "prenylation",
|
|
231
|
+
"SBO_0000222": "farnesylation",
|
|
232
|
+
"SBO_0000223": "geranylgeranylation",
|
|
233
|
+
"SBO_0000224": "ubiquitination",
|
|
234
|
+
"SBO_0000225": "delay",
|
|
235
|
+
"SBO_0000226": "density of an entity pool",
|
|
236
|
+
"SBO_0000227": "mass density of an entity",
|
|
237
|
+
"SBO_0000228": "volume density of an entity",
|
|
238
|
+
"SBO_0000229": "area density of an entity",
|
|
239
|
+
"SBO_0000230": "linear density of an entity",
|
|
240
|
+
"SBO_0000231": "occurring entity representation",
|
|
241
|
+
"SBO_0000232": "obsolete event",
|
|
242
|
+
"SBO_0000233": "hydroxylation",
|
|
243
|
+
"SBO_0000234": "logical framework",
|
|
244
|
+
"SBO_0000235": "participant",
|
|
245
|
+
"SBO_0000236": "physical entity representation",
|
|
246
|
+
"SBO_0000237": "logical combination",
|
|
247
|
+
"SBO_0000238": "not",
|
|
248
|
+
"SBO_0000239": "allosteric control",
|
|
249
|
+
"SBO_0000240": "material entity",
|
|
250
|
+
"SBO_0000241": "functional entity",
|
|
251
|
+
"SBO_0000242": "channel",
|
|
252
|
+
"SBO_0000243": "gene",
|
|
253
|
+
"SBO_0000244": "receptor",
|
|
254
|
+
"SBO_0000245": "macromolecule",
|
|
255
|
+
"SBO_0000246": "information macromolecule",
|
|
256
|
+
"SBO_0000247": "simple chemical",
|
|
257
|
+
"SBO_0000248": "chemical macromolecule",
|
|
258
|
+
"SBO_0000249": "polysaccharide",
|
|
259
|
+
"SBO_0000250": "ribonucleic acid",
|
|
260
|
+
"SBO_0000251": "deoxyribonucleic acid",
|
|
261
|
+
"SBO_0000252": "polypeptide chain",
|
|
262
|
+
"SBO_0000253": "non-covalent complex",
|
|
263
|
+
"SBO_0000254": "electrical resistance",
|
|
264
|
+
"SBO_0000255": "physical characteristic",
|
|
265
|
+
"SBO_0000256": "biochemical parameter",
|
|
266
|
+
"SBO_0000257": "conductance",
|
|
267
|
+
"SBO_0000258": "capacitance",
|
|
268
|
+
"SBO_0000259": "voltage",
|
|
269
|
+
"SBO_0000260": "enzymatic rate law for simple competitive inhibition of irreversible unireactant enzymes by one inhibitor",
|
|
270
|
+
"SBO_0000261": "inhibitory constant",
|
|
271
|
+
"SBO_0000262": "enzymatic rate law for simple uncompetitive inhibition of irreversible unireactant enzymes",
|
|
272
|
+
"SBO_0000263": "relative equilibrium constant",
|
|
273
|
+
"SBO_0000264": "relative inhibition constant",
|
|
274
|
+
"SBO_0000265": "enzymatic rate law for simple mixed-type inhibition of irreversible unireactant enzymes",
|
|
275
|
+
"SBO_0000266": "enzymatic rate law for simple irreversible non-competitive inhibition of unireactant enzymes",
|
|
276
|
+
"SBO_0000267": "enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by one inhibitor",
|
|
277
|
+
"SBO_0000268": "enzymatic rate law",
|
|
278
|
+
"SBO_0000269": "enzymatic rate law for unireactant enzymes",
|
|
279
|
+
"SBO_0000270": "enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by exclusive inhibitors",
|
|
280
|
+
"SBO_0000271": "enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by two exclusive inhibitors",
|
|
281
|
+
"SBO_0000272": "number of inhibitors",
|
|
282
|
+
"SBO_0000273": "enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by non-exclusive non-cooperative inhibitors",
|
|
283
|
+
"SBO_0000274": "enzymatic rate law for simple competitive inhibition of irreversible unireactant enzymes by two non-exclusive, non-cooperative inhibitors",
|
|
284
|
+
"SBO_0000275": "enzymatic rate law for mixed-type inhibition of irreversible enzymes by mutually exclusive inhibitors",
|
|
285
|
+
"SBO_0000276": "enzymatic rate law for mixed-type inhibition of irreversible unireactant enzymes by two inhibitors",
|
|
286
|
+
"SBO_0000277": "enzymatic rate law for non-competitive inhibition of irreversible unireactant enzymes by two exclusively binding inhibitors",
|
|
287
|
+
"SBO_0000278": "messenger RNA",
|
|
288
|
+
"SBO_0000279": "pressure",
|
|
289
|
+
"SBO_0000280": "ligand",
|
|
290
|
+
"SBO_0000281": "equilibrium constant",
|
|
291
|
+
"SBO_0000282": "dissociation constant",
|
|
292
|
+
"SBO_0000283": "acid dissociation constant",
|
|
293
|
+
"SBO_0000284": "transporter",
|
|
294
|
+
"SBO_0000285": "material entity of unspecified nature",
|
|
295
|
+
"SBO_0000286": "multimer",
|
|
296
|
+
"SBO_0000287": "EC50",
|
|
297
|
+
"SBO_0000288": "IC50",
|
|
298
|
+
"SBO_0000289": "functional compartment",
|
|
299
|
+
"SBO_0000290": "physical compartment",
|
|
300
|
+
"SBO_0000291": "empty set",
|
|
301
|
+
"SBO_0000292": "spatial continuous framework",
|
|
302
|
+
"SBO_0000293": "non-spatial continuous framework",
|
|
303
|
+
"SBO_0000294": "spatial discrete framework",
|
|
304
|
+
"SBO_0000295": "non-spatial discrete framework",
|
|
305
|
+
"SBO_0000296": "macromolecular complex",
|
|
306
|
+
"SBO_0000297": "protein complex",
|
|
307
|
+
"SBO_0000298": "synthetic chemical compound",
|
|
308
|
+
"SBO_0000299": "metabolite",
|
|
309
|
+
"SBO_0000300": "total concentration of enzyme",
|
|
310
|
+
"SBO_0000301": "total catalytic efficiency",
|
|
311
|
+
"SBO_0000302": "catalytic efficiency",
|
|
312
|
+
"SBO_0000303": "biochemical potential",
|
|
313
|
+
"SBO_0000304": "pH",
|
|
314
|
+
"SBO_0000305": "pOH",
|
|
315
|
+
"SBO_0000306": "pK",
|
|
316
|
+
"SBO_0000307": "pKa",
|
|
317
|
+
"SBO_0000308": "equilibrium or steady-state characteristic",
|
|
318
|
+
"SBO_0000309": "dissociation characteristic",
|
|
319
|
+
"SBO_0000310": "acid dissociation characteristic",
|
|
320
|
+
"SBO_0000311": "heterogeneous nuclear RNA",
|
|
321
|
+
"SBO_0000312": "mature messenger RNA",
|
|
322
|
+
"SBO_0000313": "transfer RNA",
|
|
323
|
+
"SBO_0000314": "ribosomal RNA",
|
|
324
|
+
"SBO_0000315": "ribozyme",
|
|
325
|
+
"SBO_0000316": "microRNA",
|
|
326
|
+
"SBO_0000317": "small interfering RNA",
|
|
327
|
+
"SBO_0000318": "small nuclear RNA",
|
|
328
|
+
"SBO_0000319": "small nucleolar RNA",
|
|
329
|
+
"SBO_0000320": "product catalytic rate constant",
|
|
330
|
+
"SBO_0000321": "substrate catalytic rate constant",
|
|
331
|
+
"SBO_0000322": "Michaelis constant for substrate",
|
|
332
|
+
"SBO_0000323": "Michaelis constant for product",
|
|
333
|
+
"SBO_0000324": "forward maximal velocity",
|
|
334
|
+
"SBO_0000325": "reverse maximal velocity",
|
|
335
|
+
"SBO_0000326": "enzymatic rate law for non-modulated unireactant enzymes",
|
|
336
|
+
"SBO_0000327": "non-macromolecular ion",
|
|
337
|
+
"SBO_0000328": "non-macromolecular radical",
|
|
338
|
+
"SBO_0000329": "transcription start site",
|
|
339
|
+
"SBO_0000330": "dephosphorylation",
|
|
340
|
+
"SBO_0000331": "half-life",
|
|
341
|
+
"SBO_0000332": "half-life of an exponential decay",
|
|
342
|
+
"SBO_0000333": "monoexponential decay rate law",
|
|
343
|
+
"SBO_0000334": "non-coding RNA",
|
|
344
|
+
"SBO_0000335": "gene coding region",
|
|
345
|
+
"SBO_0000336": "interactor",
|
|
346
|
+
"SBO_0000337": "association constant",
|
|
347
|
+
"SBO_0000338": "dissociation rate constant",
|
|
348
|
+
"SBO_0000339": "bimolecular association rate constant",
|
|
349
|
+
"SBO_0000340": "trimolecular association rate constant",
|
|
350
|
+
"SBO_0000341": "association rate constant",
|
|
351
|
+
"SBO_0000342": "molecular or genetic interaction",
|
|
352
|
+
"SBO_0000343": "genetic interaction",
|
|
353
|
+
"SBO_0000344": "molecular interaction",
|
|
354
|
+
"SBO_0000345": "time",
|
|
355
|
+
"SBO_0000346": "temporal measure",
|
|
356
|
+
"SBO_0000347": "duration",
|
|
357
|
+
"SBO_0000348": "exponential time constant",
|
|
358
|
+
"SBO_0000349": "inactivation rate constant",
|
|
359
|
+
"SBO_0000350": "forward reaction velocity",
|
|
360
|
+
"SBO_0000352": "reverse zeroth order rate constant",
|
|
361
|
+
"SBO_0000353": "reverse reaction velocity",
|
|
362
|
+
"SBO_0000354": "informational molecule segment",
|
|
363
|
+
"SBO_0000355": "conservation law",
|
|
364
|
+
"SBO_0000356": "decay constant",
|
|
365
|
+
"SBO_0000357": "biological effect of a perturbation",
|
|
366
|
+
"SBO_0000358": "phenotype",
|
|
367
|
+
"SBO_0000359": "mass conservation law",
|
|
368
|
+
"SBO_0000360": "quantity of an entity pool",
|
|
369
|
+
"SBO_0000361": "amount of an entity pool",
|
|
370
|
+
"SBO_0000362": "concentration conservation law",
|
|
371
|
+
"SBO_0000363": "activation constant",
|
|
372
|
+
"SBO_0000364": "multimer cardinality",
|
|
373
|
+
"SBO_0000365": "forward non-integral order rate constant, continuous case",
|
|
374
|
+
"SBO_0000366": "forward non-integral order rate constant, discrete case",
|
|
375
|
+
"SBO_0000367": "reverse non-integral order rate constant, discrete case",
|
|
376
|
+
"SBO_0000368": "reverse non-integral order rate constant, continuous case",
|
|
377
|
+
"SBO_0000369": "gene regulatory region",
|
|
378
|
+
"SBO_0000370": "Michaelis constant in non-equilibrium situation",
|
|
379
|
+
"SBO_0000371": "Michaelis constant in quasi-steady state situation",
|
|
380
|
+
"SBO_0000372": "Michaelis constant in irreversible situation",
|
|
381
|
+
"SBO_0000373": "Michaelis constant in fast equilibrium situation",
|
|
382
|
+
"SBO_0000374": "relationship",
|
|
383
|
+
"SBO_0000375": "process",
|
|
384
|
+
"SBO_0000376": "hydrolysis",
|
|
385
|
+
"SBO_0000377": "isomerisation",
|
|
386
|
+
"SBO_0000378": "enzymatic rate law for inhibition of irreversible unireactant enzymes by competing substrates",
|
|
387
|
+
"SBO_0000379": "enzymatic rate law for simple competitive inhibition of irreversible unireactant enzymes by two non-exclusive inhibitors",
|
|
388
|
+
"SBO_0000380": "biochemical coefficient",
|
|
389
|
+
"SBO_0000381": "biochemical proportionality coefficient",
|
|
390
|
+
"SBO_0000382": "biochemical exponential coefficient",
|
|
391
|
+
"SBO_0000383": "biochemical cooperative inhibition coefficient",
|
|
392
|
+
"SBO_0000384": "biochemical inhibitory proportionality coefficient",
|
|
393
|
+
"SBO_0000385": "biochemical cooperative inhibitor substrate coefficient",
|
|
394
|
+
"SBO_0000386": "enzymatic rate law for inhibition of irreversible unireactant enzymes by single competing substrate",
|
|
395
|
+
"SBO_0000387": "enzymatic rate law for competitive inhibition of irreversible unireactant enzyme by product",
|
|
396
|
+
"SBO_0000388": "enzymatic rate law for inhibition of irreversible unireactant enzymes by single competing substrate with product inhibition",
|
|
397
|
+
"SBO_0000389": "switch value",
|
|
398
|
+
"SBO_0000390": "boolean switch",
|
|
399
|
+
"SBO_0000391": "steady state expression",
|
|
400
|
+
"SBO_0000392": "equivalence",
|
|
401
|
+
"SBO_0000393": "production",
|
|
402
|
+
"SBO_0000394": "consumption",
|
|
403
|
+
"SBO_0000395": "encapsulating process",
|
|
404
|
+
"SBO_0000396": "uncertain process",
|
|
405
|
+
"SBO_0000397": "omitted process",
|
|
406
|
+
"SBO_0000398": "logical relationship",
|
|
407
|
+
"SBO_0000399": "decarboxylation",
|
|
408
|
+
"SBO_0000400": "decarbonylation",
|
|
409
|
+
"SBO_0000401": "deamination",
|
|
410
|
+
"SBO_0000402": "transfer of a chemical group",
|
|
411
|
+
"SBO_0000403": "transamination",
|
|
412
|
+
"SBO_0000404": "unit of genetic information",
|
|
413
|
+
"SBO_0000405": "perturbing agent",
|
|
414
|
+
"SBO_0000406": "observable",
|
|
415
|
+
"SBO_0000407": "absolute inhibition",
|
|
416
|
+
"SBO_0000408": "biological activity",
|
|
417
|
+
"SBO_0000409": "interaction outcome",
|
|
418
|
+
"SBO_0000410": "implicit compartment",
|
|
419
|
+
"SBO_0000411": "absolute stimulation",
|
|
420
|
+
"SBO_0000413": "positional relationship",
|
|
421
|
+
"SBO_0000414": "cis",
|
|
422
|
+
"SBO_0000415": "trans",
|
|
423
|
+
"SBO_0000416": "true",
|
|
424
|
+
"SBO_0000417": "false",
|
|
425
|
+
"SBO_0000418": "multimer of complexes",
|
|
426
|
+
"SBO_0000419": "multimer of informational molecule segment",
|
|
427
|
+
"SBO_0000420": "multimer of macromolecules",
|
|
428
|
+
"SBO_0000421": "multimer of simple chemicals",
|
|
429
|
+
"SBO_0000422": "isoinhibition constant",
|
|
430
|
+
"SBO_0000423": "pseudo-dissociation constant for product",
|
|
431
|
+
"SBO_0000424": "pseudo-dissociation constant for substrate",
|
|
432
|
+
"SBO_0000425": "reversible Hill-type enzymatic rate law",
|
|
433
|
+
"SBO_0000426": "modulated reversible Hill-type rate law",
|
|
434
|
+
"SBO_0000427": "modulated reversible Hill-type rate law with one modifier",
|
|
435
|
+
"SBO_0000428": "modulated reversible Hill-type rate law with two modifiers",
|
|
436
|
+
"SBO_0000429": "enzymatic rate law for multireactant enzymes",
|
|
437
|
+
"SBO_0000430": "enzymatic rate law for modulated unireactant enzymes",
|
|
438
|
+
"SBO_0000431": "unmodulated reversible Hill-type rate law",
|
|
439
|
+
"SBO_0000432": "irreversible Michaelis Menten rate law for two substrates",
|
|
440
|
+
"SBO_0000433": "Ordered Bi-Bi mechanism rate law",
|
|
441
|
+
"SBO_0000434": "Ordered Bi-Uni mechanism rate law",
|
|
442
|
+
"SBO_0000435": "Ordered Uni-Bi mechanism rate law",
|
|
443
|
+
"SBO_0000436": "Ping Pong Bi-Bi mechanism rate law",
|
|
444
|
+
"SBO_0000437": "reversible Iso Uni-Uni",
|
|
445
|
+
"SBO_0000438": "reversible Uni-Uni",
|
|
446
|
+
"SBO_0000439": "Uni-Uni Reversible using Haldane relationship",
|
|
447
|
+
"SBO_0000440": "enzymatic rate law for irreversible allosteric inhibition",
|
|
448
|
+
"SBO_0000441": "enzymatic rate law for mixed-type inhibition of reversible enzymes by mutually exclusive inhibitors",
|
|
449
|
+
"SBO_0000442": "enzymatic rate law for simple reversible non-competitive inhibition of unireactant enzymes",
|
|
450
|
+
"SBO_0000443": "enzymatic rate law for reversible essential activation",
|
|
451
|
+
"SBO_0000444": "enzymatic rate law for reversible mixed activation",
|
|
452
|
+
"SBO_0000445": "enzymatic rate law for irreversible substrate activation",
|
|
453
|
+
"SBO_0000446": "enzymatic rate law for irrreversible mixed activation",
|
|
454
|
+
"SBO_0000447": "enzymatic rate law for reversible catalytic activation with one activator",
|
|
455
|
+
"SBO_0000448": "enzymatic rate law for reversible specific activation",
|
|
456
|
+
"SBO_0000449": "enzymatic rate law for irreversible catalytic activation with one activator",
|
|
457
|
+
"SBO_0000450": "enzymatic rate law for irreversible specific activation",
|
|
458
|
+
"SBO_0000451": "enzymatic rate law for reversible reactions with competitive inhibition",
|
|
459
|
+
"SBO_0000452": "enzymatic rate law for reversible competitive inhibition by one inhibitor",
|
|
460
|
+
"SBO_0000453": "enzymatic rate law for reversible empirical allosteric inhibition by one inhibitor",
|
|
461
|
+
"SBO_0000454": "enzymatic rate law for reversible substrate inhibition",
|
|
462
|
+
"SBO_0000455": "enzymatic rate law for irreversible substrate inhibition",
|
|
463
|
+
"SBO_0000456": "enzymatic rate law for reversible unireactant enzyme with a single hyperbolic modulator",
|
|
464
|
+
"SBO_0000457": "enzymatic rate law for irreversible unireactant enzyme with a single hyperbolic modulator",
|
|
465
|
+
"SBO_0000458": "enzymatic rate law for simple uncompetitive inhibition of reversible unireactant enzymes",
|
|
466
|
+
"SBO_0000459": "stimulator",
|
|
467
|
+
"SBO_0000460": "enzymatic catalyst",
|
|
468
|
+
"SBO_0000461": "essential activator",
|
|
469
|
+
"SBO_0000462": "non-essential activator",
|
|
470
|
+
"SBO_0000463": "standard biochemical potential",
|
|
471
|
+
"SBO_0000464": "state variable assignment",
|
|
472
|
+
"SBO_0000465": "spatial measure",
|
|
473
|
+
"SBO_0000466": "length",
|
|
474
|
+
"SBO_0000467": "area",
|
|
475
|
+
"SBO_0000468": "volume",
|
|
476
|
+
"SBO_0000469": "containment",
|
|
477
|
+
"SBO_0000470": "mass fraction",
|
|
478
|
+
"SBO_0000471": "molal concentration of an entity",
|
|
479
|
+
"SBO_0000472": "molar concentration of an entity",
|
|
480
|
+
"SBO_0000473": "denotement",
|
|
481
|
+
"SBO_0000474": "convenience function",
|
|
482
|
+
"SBO_0000475": "periodic forcing function",
|
|
483
|
+
"SBO_0000476": "period",
|
|
484
|
+
"SBO_0000477": "phase shift",
|
|
485
|
+
"SBO_0000478": "powered product of Michaelis constant",
|
|
486
|
+
"SBO_0000479": "powered product of substrate Michaelis constants",
|
|
487
|
+
"SBO_0000480": "powered product of product Michaelis constants",
|
|
488
|
+
"SBO_0000481": "stoichiometric coefficient",
|
|
489
|
+
"SBO_0000482": "geometric mean rate constant",
|
|
490
|
+
"SBO_0000483": "forward geometric mean rate constant",
|
|
491
|
+
"SBO_0000484": "reverse geometric mean rate constant",
|
|
492
|
+
"SBO_0000485": "basal rate constant",
|
|
493
|
+
"SBO_0000486": "relative basal rate constant",
|
|
494
|
+
"SBO_0000487": "relative activity function",
|
|
495
|
+
"SBO_0000488": "relative activation function",
|
|
496
|
+
"SBO_0000489": "relative inhibition function",
|
|
497
|
+
"SBO_0000490": "number of products",
|
|
498
|
+
"SBO_0000491": "diffusion coefficient",
|
|
499
|
+
"SBO_0000492": "amplitude",
|
|
500
|
+
"SBO_0000493": "functional domain",
|
|
501
|
+
"SBO_0000494": "binding site",
|
|
502
|
+
"SBO_0000495": "catalytic site",
|
|
503
|
+
"SBO_0000496": "transmembrane domain",
|
|
504
|
+
"SBO_0000497": "ternary switch",
|
|
505
|
+
"SBO_0000498": "relative activity",
|
|
506
|
+
"SBO_0000500": "genetic suppression",
|
|
507
|
+
"SBO_0000501": "genetic enhancement",
|
|
508
|
+
"SBO_0000502": "synthetic lethality",
|
|
509
|
+
"SBO_0000503": "number of entity pool constituents",
|
|
510
|
+
"SBO_0000504": "mass of an entity pool",
|
|
511
|
+
"SBO_0000505": "concentration of enzyme",
|
|
512
|
+
"SBO_0000506": "mass of enzyme",
|
|
513
|
+
"SBO_0000507": "number of an enzyme",
|
|
514
|
+
"SBO_0000508": "number of a reactant",
|
|
515
|
+
"SBO_0000509": "concentration of reactant",
|
|
516
|
+
"SBO_0000510": "mass of reactant",
|
|
517
|
+
"SBO_0000511": "number of a product",
|
|
518
|
+
"SBO_0000512": "concentration of product",
|
|
519
|
+
"SBO_0000513": "mass of product",
|
|
520
|
+
"SBO_0000514": "number of a substrate",
|
|
521
|
+
"SBO_0000515": "concentration of substrate",
|
|
522
|
+
"SBO_0000516": "mass of substrate",
|
|
523
|
+
"SBO_0000517": "number of a modifier",
|
|
524
|
+
"SBO_0000518": "concentration of modifier",
|
|
525
|
+
"SBO_0000519": "mass of modifier",
|
|
526
|
+
"SBO_0000520": "number of an inhibitor",
|
|
527
|
+
"SBO_0000521": "concentration of inhibitor",
|
|
528
|
+
"SBO_0000522": "mass of inhibitor",
|
|
529
|
+
"SBO_0000523": "number of an activator",
|
|
530
|
+
"SBO_0000524": "concentration of activator",
|
|
531
|
+
"SBO_0000525": "mass of activator",
|
|
532
|
+
"SBO_0000526": "protein complex formation",
|
|
533
|
+
"SBO_0000527": "modular rate law",
|
|
534
|
+
"SBO_0000528": "common modular rate law",
|
|
535
|
+
"SBO_0000529": "direct binding modular rate law",
|
|
536
|
+
"SBO_0000530": "simultaneous binding modular rate law",
|
|
537
|
+
"SBO_0000531": "power-law modular rate law",
|
|
538
|
+
"SBO_0000532": "force-dependent modular rate law",
|
|
539
|
+
"SBO_0000533": "specific activator",
|
|
540
|
+
"SBO_0000534": "catalytic activator",
|
|
541
|
+
"SBO_0000535": "binding activator",
|
|
542
|
+
"SBO_0000536": "partial inhibitor",
|
|
543
|
+
"SBO_0000537": "complete inhibitor",
|
|
544
|
+
"SBO_0000538": "ionic permeability",
|
|
545
|
+
"SBO_0000539": "probabilistic parameter",
|
|
546
|
+
"SBO_0000540": "fraction of an entity pool",
|
|
547
|
+
"SBO_0000541": "mole fraction",
|
|
548
|
+
"SBO_0000542": "basic reproductive ratio",
|
|
549
|
+
"SBO_0000543": "protein aggregate",
|
|
550
|
+
"SBO_0000544": "metadata representation",
|
|
551
|
+
"SBO_0000545": "systems description parameter",
|
|
552
|
+
"SBO_0000546": "qualitative systems description parameter",
|
|
553
|
+
"SBO_0000547": "boolean logical framework",
|
|
554
|
+
"SBO_0000548": "multi-valued logical framework",
|
|
555
|
+
"SBO_0000549": "fuzzy logical framework",
|
|
556
|
+
"SBO_0000550": "annotation",
|
|
557
|
+
"SBO_0000551": "controlled short label",
|
|
558
|
+
"SBO_0000552": "reference annotation",
|
|
559
|
+
"SBO_0000553": "bibliographical reference",
|
|
560
|
+
"SBO_0000554": "database cross reference",
|
|
561
|
+
"SBO_0000555": "controlled annotation",
|
|
562
|
+
"SBO_0000556": "uncontrolled annotation",
|
|
563
|
+
"SBO_0000557": "embedded annotation",
|
|
564
|
+
"SBO_0000558": "specific activity",
|
|
565
|
+
"SBO_0000559": "enzyme activity",
|
|
566
|
+
"SBO_0000560": "mass action rate law for first order irreversible reactions, single essential stimulator, continuous scheme",
|
|
567
|
+
"SBO_0000561": "mass action rate law for first order irreversible reactions, single essential stimulator, discrete scheme",
|
|
568
|
+
"SBO_0000562": "mass action like rate law for second order irreversible reactions, one reactant, one essential stimulator",
|
|
569
|
+
"SBO_0000563": "mass action like rate law for second order irreversible reactions, one reactant, one essential stimulator, continuous scheme",
|
|
570
|
+
"SBO_0000564": "mass action like rate law for second order irreversible reactions, one reactant, one essential stimulator, discrete scheme",
|
|
571
|
+
"SBO_0000565": "systems description constant",
|
|
572
|
+
"SBO_0000566": "relative permeability",
|
|
573
|
+
"SBO_0000567": "universal gas constant",
|
|
574
|
+
"SBO_0000568": "Faraday constant",
|
|
575
|
+
"SBO_0000569": "Goldman equation",
|
|
576
|
+
"SBO_0000570": "Nernst potential",
|
|
577
|
+
"SBO_0000571": "thermodynamic parameter",
|
|
578
|
+
"SBO_0000572": "enthalpy",
|
|
579
|
+
"SBO_0000573": "enthalpy change",
|
|
580
|
+
"SBO_0000574": "standard enthalpy of formation",
|
|
581
|
+
"SBO_0000575": "standard enthalpy of reaction",
|
|
582
|
+
"SBO_0000576": "entropy",
|
|
583
|
+
"SBO_0000577": "entropy change",
|
|
584
|
+
"SBO_0000578": "standard entropy of reaction ",
|
|
585
|
+
"SBO_0000579": "standard entropy of formation",
|
|
586
|
+
"SBO_0000580": "Gibbs free energy",
|
|
587
|
+
"SBO_0000581": "Gibbs free energy change",
|
|
588
|
+
"SBO_0000582": "standard Gibbs free energy of formation",
|
|
589
|
+
"SBO_0000583": "standard Gibbs free energy of reaction",
|
|
590
|
+
"SBO_0000584": "temporal offset",
|
|
591
|
+
"SBO_0000585": "simulation duration",
|
|
592
|
+
"SBO_0000586": "model time",
|
|
593
|
+
"SBO_0000587": "transcellular membrane influx reaction",
|
|
594
|
+
"SBO_0000588": "transcellular membrane efflux reaction",
|
|
595
|
+
"SBO_0000589": "genetic production",
|
|
596
|
+
"SBO_0000590": "promoter",
|
|
597
|
+
"SBO_0000591": "petri net transition",
|
|
598
|
+
"SBO_0000592": "discrete amount of an entity pool",
|
|
599
|
+
"SBO_0000593": "petri net place",
|
|
600
|
+
"SBO_0000594": "neutral participant",
|
|
601
|
+
"SBO_0000595": "dual-activity modifier",
|
|
602
|
+
"SBO_0000596": "modifier of unknown activity",
|
|
603
|
+
"SBO_0000597": "silencer",
|
|
604
|
+
"SBO_0000599": "port",
|
|
605
|
+
"SBO_0000600": "input port",
|
|
606
|
+
"SBO_0000601": "output port",
|
|
607
|
+
"SBO_0000602": "logical parameter",
|
|
608
|
+
"SBO_0000603": "side product",
|
|
609
|
+
"SBO_0000604": "side substrate",
|
|
610
|
+
"SBO_0000605": "high affinity receptor",
|
|
611
|
+
"SBO_0000606": "low affinity receptor",
|
|
612
|
+
"SBO_0000607": "dimer",
|
|
613
|
+
"SBO_0000608": "homodimer",
|
|
614
|
+
"SBO_0000609": "heterodimer",
|
|
615
|
+
"SBO_0000610": "growth rate",
|
|
616
|
+
"SBO_0000611": "effective catalytic rate",
|
|
617
|
+
"SBO_0000612": "rate of reaction",
|
|
618
|
+
"SBO_0000613": "reaction parameter",
|
|
619
|
+
"SBO_0000614": "rate of reaction (concentration)",
|
|
620
|
+
"SBO_0000615": "rate of reaction (amount)",
|
|
621
|
+
"SBO_0000616": "extent of reaction",
|
|
622
|
+
"SBO_0000617": "Gibbs free energy of reaction",
|
|
623
|
+
"SBO_0000618": "reaction affinity",
|
|
624
|
+
"SBO_0000619": "transformed Gibbs free energy change",
|
|
625
|
+
"SBO_0000620": "transformed standard Gibbs free energy of reaction",
|
|
626
|
+
"SBO_0000621": "transformed standard Gibbs free energy of formation",
|
|
627
|
+
"SBO_0000622": "transformed Gibbs free energy of reaction",
|
|
628
|
+
"SBO_0000623": "ionic strength",
|
|
629
|
+
"SBO_0000624": "flux balance framework",
|
|
630
|
+
"SBO_0000625": "flux bound",
|
|
631
|
+
"SBO_0000626": "default flux bound",
|
|
632
|
+
"SBO_0000627": "exchange reaction",
|
|
633
|
+
"SBO_0000628": "demand reaction",
|
|
634
|
+
"SBO_0000629": "biomass production",
|
|
635
|
+
"SBO_0000630": "ATP maintenance",
|
|
636
|
+
"SBO_0000631": "pseudoreaction",
|
|
637
|
+
"SBO_0000632": "sink reaction",
|
|
638
|
+
"SBO_0000633": "subsystem",
|
|
639
|
+
"SBO_0000634": "DNA segment",
|
|
640
|
+
"SBO_0000635": "RNA segment",
|
|
641
|
+
"SBO_0000636": "allosteric activator",
|
|
642
|
+
"SBO_0000637": "non-allosteric activator",
|
|
643
|
+
"SBO_0000638": "irreversible inhibitor",
|
|
644
|
+
"SBO_0000639": "allosteric inhibitor",
|
|
645
|
+
"SBO_0000640": "uncompetitive inhibitor",
|
|
646
|
+
"SBO_0000641": "pMg",
|
|
647
|
+
"SBO_0000642": "inhibited",
|
|
648
|
+
"SBO_0000643": "stimulated",
|
|
649
|
+
"SBO_0000644": "modified",
|
|
650
|
+
"SBO_0000645": "template",
|
|
651
|
+
"SBO_0000646": "mass action rate law for reversible reactions, continuous schema",
|
|
652
|
+
"SBO_0000647": "molecular mass",
|
|
653
|
+
"SBO_0000648": "protein molecular mass",
|
|
654
|
+
"SBO_0000649": "biomass",
|
|
655
|
+
"SBO_0000650": "reversible process",
|
|
656
|
+
"SBO_0000651": "irreversible process",
|
|
657
|
+
"SBO_0000652": "polymerization",
|
|
658
|
+
"SBO_0000653": "depolymerization",
|
|
659
|
+
"SBO_0000654": "co-transport reaction",
|
|
660
|
+
"SBO_0000655": "transport reaction",
|
|
661
|
+
"SBO_0000656": "activation",
|
|
662
|
+
"SBO_0000657": "active transport",
|
|
663
|
+
"SBO_0000658": "passive transport",
|
|
664
|
+
"SBO_0000659": "symporter-mediated transport",
|
|
665
|
+
"SBO_0000660": "antiporter-mediated transport",
|
|
666
|
+
"SBO_0000661": "capacity",
|
|
667
|
+
"SBO_0000662": "occupancy",
|
|
668
|
+
"SBO_0000663": "fractional occupancy",
|
|
669
|
+
"SBO_0000664": "contained entity",
|
|
670
|
+
"SBO_0000665": "inactivation",
|
|
671
|
+
"SBO_0000666": "chain length",
|
|
672
|
+
"SBO_0000667": "protein chain length",
|
|
673
|
+
"SBO_0000668": "yield",
|
|
674
|
+
"SBO_0000669": "biomass yield on substrate",
|
|
675
|
+
"SBO_0000670": "product yield on substrate",
|
|
676
|
+
"SBO_0000671": "non-enzymatic catalyst",
|
|
677
|
+
"SBO_0000672": "spontaneous reaction",
|
|
678
|
+
"SBO_0000673": "forward effective catalytic rate",
|
|
679
|
+
"SBO_0000674": "reverse effective catalytic rate",
|
|
680
|
+
"SBO_0000675": "deterministic non-spatial continuous framework",
|
|
681
|
+
"SBO_0000676": "stochastic non-spatial continuous framework",
|
|
682
|
+
"SBO_0000677": "population-based discrete spatial simulation",
|
|
683
|
+
"SBO_0000678": "particle-based discrete spatial simulation",
|
|
684
|
+
"SBO_0000679": "population-based discrete non-spatial simulation",
|
|
685
|
+
"SBO_0000680": "particle-based discrete non-spatial simulation",
|
|
686
|
+
"SBO_0000681": "hybrid framework",
|
|
687
|
+
"SBO_0000682": "hybrid spatial framework",
|
|
688
|
+
"SBO_0000683": "hybrid non-spatial framework",
|
|
689
|
+
"SBO_0000684": "hybrid flux balance-deterministic continuous non-spatial framework",
|
|
690
|
+
"SBO_0000685": "hybrid flux balance-discrete non-spatial framework",
|
|
691
|
+
"SBO_0000686": "hybrid flux balance-logical-deterministic continuous non-spatial framework",
|
|
692
|
+
"SBO_0000687": "hybrid flux balance-logical non-spatial framework",
|
|
693
|
+
"SBO_0000688": "hybrid flux logical-discrete non-spatial framework",
|
|
694
|
+
"SBO_0000689": "hybrid continuous-discrete non-spatial framework",
|
|
695
|
+
"SBO_0000690": "hybrid deterministic continuous-discrete non-spatial framework",
|
|
696
|
+
"SBO_0000691": "hybrid stochastic continuous-discrete non-spatial framework",
|
|
697
|
+
"SBO_0000692": "resource balance framework",
|
|
698
|
+
"SBO_0000693": "constraint-based framework",
|
|
699
|
+
"SBO_0000694": "optimization framework",
|
|
700
|
+
"SBO_0000695": "ligation",
|
|
701
|
+
}
|
|
702
|
+
|
|
703
|
+
pattern = r"^SBO_\d{7}$"
|
|
704
|
+
|
|
705
|
+
|
|
706
|
+
class SBO(str, Enum):
|
|
707
|
+
"""Enum for SBO ontology."""
|
|
708
|
+
|
|
709
|
+
# systems biology representation
|
|
710
|
+
SBO_0000000 = "SBO_0000000"
|
|
711
|
+
SYSTEMS_BIOLOGY_REPRESENTATION = "SBO_0000000"
|
|
712
|
+
|
|
713
|
+
# rate law
|
|
714
|
+
SBO_0000001 = "SBO_0000001"
|
|
715
|
+
RATE_LAW = "SBO_0000001"
|
|
716
|
+
|
|
717
|
+
# quantitative systems description parameter
|
|
718
|
+
SBO_0000002 = "SBO_0000002"
|
|
719
|
+
QUANTITATIVE_SYSTEMS_DESCRIPTION_PARAMETER = "SBO_0000002"
|
|
720
|
+
|
|
721
|
+
# participant role
|
|
722
|
+
SBO_0000003 = "SBO_0000003"
|
|
723
|
+
PARTICIPANT_ROLE = "SBO_0000003"
|
|
724
|
+
|
|
725
|
+
# modelling framework
|
|
726
|
+
SBO_0000004 = "SBO_0000004"
|
|
727
|
+
MODELLING_FRAMEWORK = "SBO_0000004"
|
|
728
|
+
|
|
729
|
+
# obsolete mathematical expression
|
|
730
|
+
SBO_0000005 = "SBO_0000005"
|
|
731
|
+
OBSOLETE_MATHEMATICAL_EXPRESSION = "SBO_0000005"
|
|
732
|
+
|
|
733
|
+
# obsolete parameter
|
|
734
|
+
SBO_0000006 = "SBO_0000006"
|
|
735
|
+
OBSOLETE_PARAMETER = "SBO_0000006"
|
|
736
|
+
|
|
737
|
+
# obsolete participant type
|
|
738
|
+
SBO_0000007 = "SBO_0000007"
|
|
739
|
+
OBSOLETE_PARTICIPANT_TYPE = "SBO_0000007"
|
|
740
|
+
|
|
741
|
+
# obsolete modelling framework
|
|
742
|
+
SBO_0000008 = "SBO_0000008"
|
|
743
|
+
OBSOLETE_MODELLING_FRAMEWORK = "SBO_0000008"
|
|
744
|
+
|
|
745
|
+
# kinetic constant
|
|
746
|
+
SBO_0000009 = "SBO_0000009"
|
|
747
|
+
KINETIC_CONSTANT = "SBO_0000009"
|
|
748
|
+
|
|
749
|
+
# reactant
|
|
750
|
+
SBO_0000010 = "SBO_0000010"
|
|
751
|
+
REACTANT = "SBO_0000010"
|
|
752
|
+
|
|
753
|
+
# product
|
|
754
|
+
SBO_0000011 = "SBO_0000011"
|
|
755
|
+
PRODUCT = "SBO_0000011"
|
|
756
|
+
|
|
757
|
+
# mass action rate law
|
|
758
|
+
SBO_0000012 = "SBO_0000012"
|
|
759
|
+
MASS_ACTION_RATE_LAW = "SBO_0000012"
|
|
760
|
+
|
|
761
|
+
# catalyst
|
|
762
|
+
SBO_0000013 = "SBO_0000013"
|
|
763
|
+
CATALYST = "SBO_0000013"
|
|
764
|
+
|
|
765
|
+
# enzyme
|
|
766
|
+
SBO_0000014 = "SBO_0000014"
|
|
767
|
+
ENZYME = "SBO_0000014"
|
|
768
|
+
|
|
769
|
+
# substrate
|
|
770
|
+
SBO_0000015 = "SBO_0000015"
|
|
771
|
+
SUBSTRATE = "SBO_0000015"
|
|
772
|
+
|
|
773
|
+
# unimolecular rate constant
|
|
774
|
+
SBO_0000016 = "SBO_0000016"
|
|
775
|
+
UNIMOLECULAR_RATE_CONSTANT = "SBO_0000016"
|
|
776
|
+
|
|
777
|
+
# bimolecular rate constant
|
|
778
|
+
SBO_0000017 = "SBO_0000017"
|
|
779
|
+
BIMOLECULAR_RATE_CONSTANT = "SBO_0000017"
|
|
780
|
+
|
|
781
|
+
# trimolecular rate constant
|
|
782
|
+
SBO_0000018 = "SBO_0000018"
|
|
783
|
+
TRIMOLECULAR_RATE_CONSTANT = "SBO_0000018"
|
|
784
|
+
|
|
785
|
+
# modifier
|
|
786
|
+
SBO_0000019 = "SBO_0000019"
|
|
787
|
+
MODIFIER = "SBO_0000019"
|
|
788
|
+
|
|
789
|
+
# inhibitor
|
|
790
|
+
SBO_0000020 = "SBO_0000020"
|
|
791
|
+
INHIBITOR = "SBO_0000020"
|
|
792
|
+
|
|
793
|
+
# potentiator
|
|
794
|
+
SBO_0000021 = "SBO_0000021"
|
|
795
|
+
POTENTIATOR = "SBO_0000021"
|
|
796
|
+
|
|
797
|
+
# forward unimolecular rate constant
|
|
798
|
+
SBO_0000022 = "SBO_0000022"
|
|
799
|
+
FORWARD_UNIMOLECULAR_RATE_CONSTANT = "SBO_0000022"
|
|
800
|
+
|
|
801
|
+
# forward bimolecular rate constant
|
|
802
|
+
SBO_0000023 = "SBO_0000023"
|
|
803
|
+
FORWARD_BIMOLECULAR_RATE_CONSTANT = "SBO_0000023"
|
|
804
|
+
|
|
805
|
+
# forward trimolecular rate constant
|
|
806
|
+
SBO_0000024 = "SBO_0000024"
|
|
807
|
+
FORWARD_TRIMOLECULAR_RATE_CONSTANT = "SBO_0000024"
|
|
808
|
+
|
|
809
|
+
# catalytic rate constant
|
|
810
|
+
SBO_0000025 = "SBO_0000025"
|
|
811
|
+
CATALYTIC_RATE_CONSTANT = "SBO_0000025"
|
|
812
|
+
|
|
813
|
+
# new term name
|
|
814
|
+
SBO_0000026 = "SBO_0000026"
|
|
815
|
+
NEW_TERM_NAME = "SBO_0000026"
|
|
816
|
+
|
|
817
|
+
# Michaelis constant
|
|
818
|
+
SBO_0000027 = "SBO_0000027"
|
|
819
|
+
MICHAELIS_CONSTANT = "SBO_0000027"
|
|
820
|
+
|
|
821
|
+
# enzymatic rate law for irreversible non-modulated non-interacting unireactant enzymes
|
|
822
|
+
SBO_0000028 = "SBO_0000028"
|
|
823
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_NON_MODULATED_NON_INTERACTING_UNIREACTANT_ENZYMES = (
|
|
824
|
+
"SBO_0000028"
|
|
825
|
+
)
|
|
826
|
+
|
|
827
|
+
# Henri-Michaelis-Menten rate law
|
|
828
|
+
SBO_0000029 = "SBO_0000029"
|
|
829
|
+
HENRI_MICHAELIS_MENTEN_RATE_LAW = "SBO_0000029"
|
|
830
|
+
|
|
831
|
+
# Van Slyke-Cullen rate law
|
|
832
|
+
SBO_0000030 = "SBO_0000030"
|
|
833
|
+
VAN_SLYKE_CULLEN_RATE_LAW = "SBO_0000030"
|
|
834
|
+
|
|
835
|
+
# Briggs-Haldane rate law
|
|
836
|
+
SBO_0000031 = "SBO_0000031"
|
|
837
|
+
BRIGGS_HALDANE_RATE_LAW = "SBO_0000031"
|
|
838
|
+
|
|
839
|
+
# reverse unimolecular rate constant
|
|
840
|
+
SBO_0000032 = "SBO_0000032"
|
|
841
|
+
REVERSE_UNIMOLECULAR_RATE_CONSTANT = "SBO_0000032"
|
|
842
|
+
|
|
843
|
+
# reverse bimolecular rate constant
|
|
844
|
+
SBO_0000033 = "SBO_0000033"
|
|
845
|
+
REVERSE_BIMOLECULAR_RATE_CONSTANT = "SBO_0000033"
|
|
846
|
+
|
|
847
|
+
# reverse trimolecular rate constant
|
|
848
|
+
SBO_0000034 = "SBO_0000034"
|
|
849
|
+
REVERSE_TRIMOLECULAR_RATE_CONSTANT = "SBO_0000034"
|
|
850
|
+
|
|
851
|
+
# forward unimolecular rate constant, continuous case
|
|
852
|
+
SBO_0000035 = "SBO_0000035"
|
|
853
|
+
FORWARD_UNIMOLECULAR_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000035"
|
|
854
|
+
|
|
855
|
+
# forward bimolecular rate constant, continuous case
|
|
856
|
+
SBO_0000036 = "SBO_0000036"
|
|
857
|
+
FORWARD_BIMOLECULAR_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000036"
|
|
858
|
+
|
|
859
|
+
# forward trimolecular rate constant, continuous case
|
|
860
|
+
SBO_0000037 = "SBO_0000037"
|
|
861
|
+
FORWARD_TRIMOLECULAR_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000037"
|
|
862
|
+
|
|
863
|
+
# reverse unimolecular rate constant, continuous case
|
|
864
|
+
SBO_0000038 = "SBO_0000038"
|
|
865
|
+
REVERSE_UNIMOLECULAR_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000038"
|
|
866
|
+
|
|
867
|
+
# reverse bimolecular rate constant, continuous case
|
|
868
|
+
SBO_0000039 = "SBO_0000039"
|
|
869
|
+
REVERSE_BIMOLECULAR_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000039"
|
|
870
|
+
|
|
871
|
+
# reverse trimolecular rate constant, continuous case
|
|
872
|
+
SBO_0000040 = "SBO_0000040"
|
|
873
|
+
REVERSE_TRIMOLECULAR_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000040"
|
|
874
|
+
|
|
875
|
+
# mass action rate law for irreversible reactions
|
|
876
|
+
SBO_0000041 = "SBO_0000041"
|
|
877
|
+
MASS_ACTION_RATE_LAW_FOR_IRREVERSIBLE_REACTIONS = "SBO_0000041"
|
|
878
|
+
|
|
879
|
+
# mass action rate law for reversible reactions
|
|
880
|
+
SBO_0000042 = "SBO_0000042"
|
|
881
|
+
MASS_ACTION_RATE_LAW_FOR_REVERSIBLE_REACTIONS = "SBO_0000042"
|
|
882
|
+
|
|
883
|
+
# mass action rate law for zeroth order irreversible reactions
|
|
884
|
+
SBO_0000043 = "SBO_0000043"
|
|
885
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_IRREVERSIBLE_REACTIONS = "SBO_0000043"
|
|
886
|
+
|
|
887
|
+
# mass action rate law for first order irreversible reactions
|
|
888
|
+
SBO_0000044 = "SBO_0000044"
|
|
889
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_IRREVERSIBLE_REACTIONS = "SBO_0000044"
|
|
890
|
+
|
|
891
|
+
# mass action rate law for second order irreversible reactions
|
|
892
|
+
SBO_0000045 = "SBO_0000045"
|
|
893
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS = "SBO_0000045"
|
|
894
|
+
|
|
895
|
+
# zeroth order rate constant
|
|
896
|
+
SBO_0000046 = "SBO_0000046"
|
|
897
|
+
ZEROTH_ORDER_RATE_CONSTANT = "SBO_0000046"
|
|
898
|
+
|
|
899
|
+
# mass action rate law for zeroth order irreversible reactions, continuous scheme
|
|
900
|
+
SBO_0000047 = "SBO_0000047"
|
|
901
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_IRREVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
902
|
+
"SBO_0000047"
|
|
903
|
+
)
|
|
904
|
+
|
|
905
|
+
# forward zeroth order rate constant, continuous case
|
|
906
|
+
SBO_0000048 = "SBO_0000048"
|
|
907
|
+
FORWARD_ZEROTH_ORDER_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000048"
|
|
908
|
+
|
|
909
|
+
# mass action rate law for first order irreversible reactions, continuous scheme
|
|
910
|
+
SBO_0000049 = "SBO_0000049"
|
|
911
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_IRREVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
912
|
+
"SBO_0000049"
|
|
913
|
+
)
|
|
914
|
+
|
|
915
|
+
# mass action rate law for second order irreversible reactions, one reactant
|
|
916
|
+
SBO_0000050 = "SBO_0000050"
|
|
917
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
918
|
+
"SBO_0000050"
|
|
919
|
+
)
|
|
920
|
+
|
|
921
|
+
# mass action rate law for second order irreversible reactions, one reactant, continuous scheme
|
|
922
|
+
SBO_0000052 = "SBO_0000052"
|
|
923
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__CONTINUOUS_SCHEME = (
|
|
924
|
+
"SBO_0000052"
|
|
925
|
+
)
|
|
926
|
+
|
|
927
|
+
# mass action rate law for second order irreversible reactions, two reactants
|
|
928
|
+
SBO_0000053 = "SBO_0000053"
|
|
929
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
930
|
+
"SBO_0000053"
|
|
931
|
+
)
|
|
932
|
+
|
|
933
|
+
# mass action rate law for second order irreversible reactions, two reactants, continuous scheme
|
|
934
|
+
SBO_0000054 = "SBO_0000054"
|
|
935
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__TWO_REACTANTS__CONTINUOUS_SCHEME = (
|
|
936
|
+
"SBO_0000054"
|
|
937
|
+
)
|
|
938
|
+
|
|
939
|
+
# mass action rate law for third order irreversible reactions
|
|
940
|
+
SBO_0000055 = "SBO_0000055"
|
|
941
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS = "SBO_0000055"
|
|
942
|
+
|
|
943
|
+
# mass action rate law for third order irreversible reactions, one reactant
|
|
944
|
+
SBO_0000056 = "SBO_0000056"
|
|
945
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
946
|
+
"SBO_0000056"
|
|
947
|
+
)
|
|
948
|
+
|
|
949
|
+
# mass action rate law for third order irreversible reactions, one reactant, continuous scheme
|
|
950
|
+
SBO_0000057 = "SBO_0000057"
|
|
951
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__CONTINUOUS_SCHEME = (
|
|
952
|
+
"SBO_0000057"
|
|
953
|
+
)
|
|
954
|
+
|
|
955
|
+
# mass action rate law for third order irreversible reactions, two reactants
|
|
956
|
+
SBO_0000058 = "SBO_0000058"
|
|
957
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
958
|
+
"SBO_0000058"
|
|
959
|
+
)
|
|
960
|
+
|
|
961
|
+
# mass action rate law for third order irreversible reactions, two reactants, continuous scheme
|
|
962
|
+
SBO_0000059 = "SBO_0000059"
|
|
963
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__TWO_REACTANTS__CONTINUOUS_SCHEME = (
|
|
964
|
+
"SBO_0000059"
|
|
965
|
+
)
|
|
966
|
+
|
|
967
|
+
# mass action rate law for third order irreversible reactions, three reactants
|
|
968
|
+
SBO_0000060 = "SBO_0000060"
|
|
969
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__THREE_REACTANTS = (
|
|
970
|
+
"SBO_0000060"
|
|
971
|
+
)
|
|
972
|
+
|
|
973
|
+
# mass action rate law for third order irreversible reactions, three reactants, continuous scheme
|
|
974
|
+
SBO_0000061 = "SBO_0000061"
|
|
975
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__THREE_REACTANTS__CONTINUOUS_SCHEME = (
|
|
976
|
+
"SBO_0000061"
|
|
977
|
+
)
|
|
978
|
+
|
|
979
|
+
# continuous framework
|
|
980
|
+
SBO_0000062 = "SBO_0000062"
|
|
981
|
+
CONTINUOUS_FRAMEWORK = "SBO_0000062"
|
|
982
|
+
|
|
983
|
+
# discrete framework
|
|
984
|
+
SBO_0000063 = "SBO_0000063"
|
|
985
|
+
DISCRETE_FRAMEWORK = "SBO_0000063"
|
|
986
|
+
|
|
987
|
+
# mathematical expression
|
|
988
|
+
SBO_0000064 = "SBO_0000064"
|
|
989
|
+
MATHEMATICAL_EXPRESSION = "SBO_0000064"
|
|
990
|
+
|
|
991
|
+
# forward zeroth order rate constant, discrete case
|
|
992
|
+
SBO_0000065 = "SBO_0000065"
|
|
993
|
+
FORWARD_ZEROTH_ORDER_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000065"
|
|
994
|
+
|
|
995
|
+
# forward unimolecular rate constant, discrete case
|
|
996
|
+
SBO_0000066 = "SBO_0000066"
|
|
997
|
+
FORWARD_UNIMOLECULAR_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000066"
|
|
998
|
+
|
|
999
|
+
# forward bimolecular rate constant, discrete case
|
|
1000
|
+
SBO_0000067 = "SBO_0000067"
|
|
1001
|
+
FORWARD_BIMOLECULAR_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000067"
|
|
1002
|
+
|
|
1003
|
+
# forward trimolecular rate constant, discrete case
|
|
1004
|
+
SBO_0000068 = "SBO_0000068"
|
|
1005
|
+
FORWARD_TRIMOLECULAR_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000068"
|
|
1006
|
+
|
|
1007
|
+
# mass action rate law for zeroth order reversible reactions
|
|
1008
|
+
SBO_0000069 = "SBO_0000069"
|
|
1009
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_REVERSIBLE_REACTIONS = "SBO_0000069"
|
|
1010
|
+
|
|
1011
|
+
# mass action rate law for zeroth order forward, first order reverse, reversible reactions, continuous scheme
|
|
1012
|
+
SBO_0000070 = "SBO_0000070"
|
|
1013
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
1014
|
+
"SBO_0000070"
|
|
1015
|
+
)
|
|
1016
|
+
|
|
1017
|
+
# mass action rate law for zeroth order forward, second order reverse, reversible reactions, continuous scheme
|
|
1018
|
+
SBO_0000071 = "SBO_0000071"
|
|
1019
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
1020
|
+
"SBO_0000071"
|
|
1021
|
+
)
|
|
1022
|
+
|
|
1023
|
+
# mass action rate law for zeroth order forward, second order reverse, reversible reactions, one product, continuous scheme
|
|
1024
|
+
SBO_0000072 = "SBO_0000072"
|
|
1025
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1026
|
+
"SBO_0000072"
|
|
1027
|
+
)
|
|
1028
|
+
|
|
1029
|
+
# mass action rate law for zeroth order forward, second order reverse, reversible reactions, two products, continuous scheme
|
|
1030
|
+
SBO_0000073 = "SBO_0000073"
|
|
1031
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1032
|
+
"SBO_0000073"
|
|
1033
|
+
)
|
|
1034
|
+
|
|
1035
|
+
# mass action rate law for zeroth order forward, third order reverse, reversible reactions, continuous scheme
|
|
1036
|
+
SBO_0000074 = "SBO_0000074"
|
|
1037
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
1038
|
+
"SBO_0000074"
|
|
1039
|
+
)
|
|
1040
|
+
|
|
1041
|
+
# mass action rate law for zeroth order forward, third order reverse, reversible reactions, one product, continuous scheme
|
|
1042
|
+
SBO_0000075 = "SBO_0000075"
|
|
1043
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1044
|
+
"SBO_0000075"
|
|
1045
|
+
)
|
|
1046
|
+
|
|
1047
|
+
# mass action rate law for zeroth order forward, third order reverse, reversible reactions, two products, continuous scheme
|
|
1048
|
+
SBO_0000076 = "SBO_0000076"
|
|
1049
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1050
|
+
"SBO_0000076"
|
|
1051
|
+
)
|
|
1052
|
+
|
|
1053
|
+
# mass action rate law for zeroth order forward, third order reverse, reversible reactions, three products, continuous scheme
|
|
1054
|
+
SBO_0000077 = "SBO_0000077"
|
|
1055
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1056
|
+
"SBO_0000077"
|
|
1057
|
+
)
|
|
1058
|
+
|
|
1059
|
+
# mass action rate law for first order reversible reactions
|
|
1060
|
+
SBO_0000078 = "SBO_0000078"
|
|
1061
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_REVERSIBLE_REACTIONS = "SBO_0000078"
|
|
1062
|
+
|
|
1063
|
+
# mass action rate law for first order forward, zeroth order reverse, reversible reactions, continuous scheme
|
|
1064
|
+
SBO_0000079 = "SBO_0000079"
|
|
1065
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__ZEROTH_ORDER_REVERSE__REVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
1066
|
+
"SBO_0000079"
|
|
1067
|
+
)
|
|
1068
|
+
|
|
1069
|
+
# mass action rate law for first order forward, first order reverse, reversible reactions, continuous scheme
|
|
1070
|
+
SBO_0000080 = "SBO_0000080"
|
|
1071
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = (
|
|
1072
|
+
"SBO_0000080"
|
|
1073
|
+
)
|
|
1074
|
+
|
|
1075
|
+
# mass action rate law for first order forward, second order reverse, reversible reactions
|
|
1076
|
+
SBO_0000081 = "SBO_0000081"
|
|
1077
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS = (
|
|
1078
|
+
"SBO_0000081"
|
|
1079
|
+
)
|
|
1080
|
+
|
|
1081
|
+
# mass action rate law for first order forward, second order reverse, reversible reactions, one product, continuous scheme
|
|
1082
|
+
SBO_0000082 = "SBO_0000082"
|
|
1083
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1084
|
+
"SBO_0000082"
|
|
1085
|
+
)
|
|
1086
|
+
|
|
1087
|
+
# mass action rate law for first order forward, second order reverse, reversible reactions, two products, continuous scheme
|
|
1088
|
+
SBO_0000083 = "SBO_0000083"
|
|
1089
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1090
|
+
"SBO_0000083"
|
|
1091
|
+
)
|
|
1092
|
+
|
|
1093
|
+
# mass action rate law for first order forward, third order reverse, reversible reactions
|
|
1094
|
+
SBO_0000084 = "SBO_0000084"
|
|
1095
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS = (
|
|
1096
|
+
"SBO_0000084"
|
|
1097
|
+
)
|
|
1098
|
+
|
|
1099
|
+
# mass action rate law for first order forward, third order reverse, reversible reactions, one product, continuous scheme
|
|
1100
|
+
SBO_0000085 = "SBO_0000085"
|
|
1101
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1102
|
+
"SBO_0000085"
|
|
1103
|
+
)
|
|
1104
|
+
|
|
1105
|
+
# mass action rate law for first order forward, third order reverse, reversible reactions, two products, continuous scheme
|
|
1106
|
+
SBO_0000086 = "SBO_0000086"
|
|
1107
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1108
|
+
"SBO_0000086"
|
|
1109
|
+
)
|
|
1110
|
+
|
|
1111
|
+
# mass action rate law for first order forward, third order reverse, reversible reactions, three products, continuous scheme
|
|
1112
|
+
SBO_0000087 = "SBO_0000087"
|
|
1113
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1114
|
+
"SBO_0000087"
|
|
1115
|
+
)
|
|
1116
|
+
|
|
1117
|
+
# mass action rate law for second order reversible reactions
|
|
1118
|
+
SBO_0000088 = "SBO_0000088"
|
|
1119
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_REVERSIBLE_REACTIONS = "SBO_0000088"
|
|
1120
|
+
|
|
1121
|
+
# mass action rate law for second order forward, reversible reactions, one reactant
|
|
1122
|
+
SBO_0000089 = "SBO_0000089"
|
|
1123
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__REVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
1124
|
+
"SBO_0000089"
|
|
1125
|
+
)
|
|
1126
|
+
|
|
1127
|
+
# mass action rate law for second order forward, zeroth order reverse, reversible reactions, one reactant, continuous scheme
|
|
1128
|
+
SBO_0000090 = "SBO_0000090"
|
|
1129
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__ZEROTH_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__CONTINUOUS_SCHEME = (
|
|
1130
|
+
"SBO_0000090"
|
|
1131
|
+
)
|
|
1132
|
+
|
|
1133
|
+
# mass action rate law for second order forward, first order reverse, reversible reactions, one reactant, continuous scheme
|
|
1134
|
+
SBO_0000091 = "SBO_0000091"
|
|
1135
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__CONTINUOUS_SCHEME = (
|
|
1136
|
+
"SBO_0000091"
|
|
1137
|
+
)
|
|
1138
|
+
|
|
1139
|
+
# mass action rate law for second order forward, second order reverse, reversible reactions, one reactant
|
|
1140
|
+
SBO_0000092 = "SBO_0000092"
|
|
1141
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
1142
|
+
"SBO_0000092"
|
|
1143
|
+
)
|
|
1144
|
+
|
|
1145
|
+
# mass action rate law for second order forward, second order reverse, reversible reactions, one reactant, one product, continuous scheme
|
|
1146
|
+
SBO_0000093 = "SBO_0000093"
|
|
1147
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1148
|
+
"SBO_0000093"
|
|
1149
|
+
)
|
|
1150
|
+
|
|
1151
|
+
# mass action rate law for second order forward, second order reverse, reversible reactions, two products, continuous scheme
|
|
1152
|
+
SBO_0000094 = "SBO_0000094"
|
|
1153
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1154
|
+
"SBO_0000094"
|
|
1155
|
+
)
|
|
1156
|
+
|
|
1157
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, one reactant
|
|
1158
|
+
SBO_0000095 = "SBO_0000095"
|
|
1159
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
1160
|
+
"SBO_0000095"
|
|
1161
|
+
)
|
|
1162
|
+
|
|
1163
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, one reactant, one product, continuous scheme
|
|
1164
|
+
SBO_0000096 = "SBO_0000096"
|
|
1165
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1166
|
+
"SBO_0000096"
|
|
1167
|
+
)
|
|
1168
|
+
|
|
1169
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, one reactant, two products, continuous scheme
|
|
1170
|
+
SBO_0000097 = "SBO_0000097"
|
|
1171
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1172
|
+
"SBO_0000097"
|
|
1173
|
+
)
|
|
1174
|
+
|
|
1175
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, one reactant, three products, continuous scheme
|
|
1176
|
+
SBO_0000098 = "SBO_0000098"
|
|
1177
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1178
|
+
"SBO_0000098"
|
|
1179
|
+
)
|
|
1180
|
+
|
|
1181
|
+
# mass action rate law for second order forward, reversible reactions, two reactants
|
|
1182
|
+
SBO_0000099 = "SBO_0000099"
|
|
1183
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__REVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
1184
|
+
"SBO_0000099"
|
|
1185
|
+
)
|
|
1186
|
+
|
|
1187
|
+
# mass action rate law for second order forward, zeroth order reverse, reversible reactions, two reactants, continuous scheme
|
|
1188
|
+
SBO_0000100 = "SBO_0000100"
|
|
1189
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__ZEROTH_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__CONTINUOUS_SCHEME = (
|
|
1190
|
+
"SBO_0000100"
|
|
1191
|
+
)
|
|
1192
|
+
|
|
1193
|
+
# mass action rate law for second order forward, first order reverse, reversible reactions, two reactants, continuous scheme
|
|
1194
|
+
SBO_0000101 = "SBO_0000101"
|
|
1195
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__CONTINUOUS_SCHEME = (
|
|
1196
|
+
"SBO_0000101"
|
|
1197
|
+
)
|
|
1198
|
+
|
|
1199
|
+
# mass action rate law for second order forward, second order reverse, reversible reactions, two reactants
|
|
1200
|
+
SBO_0000102 = "SBO_0000102"
|
|
1201
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
1202
|
+
"SBO_0000102"
|
|
1203
|
+
)
|
|
1204
|
+
|
|
1205
|
+
# mass action rate law for second order forward, second order reverse, reversible reactions, two reactants, one product, continuous scheme
|
|
1206
|
+
SBO_0000103 = "SBO_0000103"
|
|
1207
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1208
|
+
"SBO_0000103"
|
|
1209
|
+
)
|
|
1210
|
+
|
|
1211
|
+
# mass action rate law for second order forward, second order reverse, reversible reactions, two reactants, two products, continuous scheme
|
|
1212
|
+
SBO_0000104 = "SBO_0000104"
|
|
1213
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1214
|
+
"SBO_0000104"
|
|
1215
|
+
)
|
|
1216
|
+
|
|
1217
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, two reactants
|
|
1218
|
+
SBO_0000105 = "SBO_0000105"
|
|
1219
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
1220
|
+
"SBO_0000105"
|
|
1221
|
+
)
|
|
1222
|
+
|
|
1223
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, two reactants, one product, continuous scheme
|
|
1224
|
+
SBO_0000106 = "SBO_0000106"
|
|
1225
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1226
|
+
"SBO_0000106"
|
|
1227
|
+
)
|
|
1228
|
+
|
|
1229
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, two reactants, two products, continuous scheme
|
|
1230
|
+
SBO_0000107 = "SBO_0000107"
|
|
1231
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1232
|
+
"SBO_0000107"
|
|
1233
|
+
)
|
|
1234
|
+
|
|
1235
|
+
# mass action rate law for second order forward, third order reverse, reversible reactions, two reactants, three products, continuous scheme
|
|
1236
|
+
SBO_0000108 = "SBO_0000108"
|
|
1237
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1238
|
+
"SBO_0000108"
|
|
1239
|
+
)
|
|
1240
|
+
|
|
1241
|
+
# mass action rate law for third order reversible reactions
|
|
1242
|
+
SBO_0000109 = "SBO_0000109"
|
|
1243
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_REVERSIBLE_REACTIONS = "SBO_0000109"
|
|
1244
|
+
|
|
1245
|
+
# mass action rate law for third order forward, reversible reactions, two reactants
|
|
1246
|
+
SBO_0000110 = "SBO_0000110"
|
|
1247
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__REVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
1248
|
+
"SBO_0000110"
|
|
1249
|
+
)
|
|
1250
|
+
|
|
1251
|
+
# mass action rate law for third order forward, zeroth order reverse, reversible reactions, two reactants, continuous scheme
|
|
1252
|
+
SBO_0000111 = "SBO_0000111"
|
|
1253
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__ZEROTH_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__CONTINUOUS_SCHEME = (
|
|
1254
|
+
"SBO_0000111"
|
|
1255
|
+
)
|
|
1256
|
+
|
|
1257
|
+
# mass action rate law for third order forward, first order reverse, reversible reactions, two reactants, continuous scheme
|
|
1258
|
+
SBO_0000112 = "SBO_0000112"
|
|
1259
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__CONTINUOUS_SCHEME = (
|
|
1260
|
+
"SBO_0000112"
|
|
1261
|
+
)
|
|
1262
|
+
|
|
1263
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, two reactants
|
|
1264
|
+
SBO_0000113 = "SBO_0000113"
|
|
1265
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
1266
|
+
"SBO_0000113"
|
|
1267
|
+
)
|
|
1268
|
+
|
|
1269
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, two reactants, one product, continuous scheme
|
|
1270
|
+
SBO_0000114 = "SBO_0000114"
|
|
1271
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1272
|
+
"SBO_0000114"
|
|
1273
|
+
)
|
|
1274
|
+
|
|
1275
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, two reactants, two products, continuous scheme
|
|
1276
|
+
SBO_0000115 = "SBO_0000115"
|
|
1277
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1278
|
+
"SBO_0000115"
|
|
1279
|
+
)
|
|
1280
|
+
|
|
1281
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, two reactants
|
|
1282
|
+
SBO_0000116 = "SBO_0000116"
|
|
1283
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS = (
|
|
1284
|
+
"SBO_0000116"
|
|
1285
|
+
)
|
|
1286
|
+
|
|
1287
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, two reactants, one product, continuous scheme
|
|
1288
|
+
SBO_0000117 = "SBO_0000117"
|
|
1289
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1290
|
+
"SBO_0000117"
|
|
1291
|
+
)
|
|
1292
|
+
|
|
1293
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, two reactants, two products, continuous scheme
|
|
1294
|
+
SBO_0000118 = "SBO_0000118"
|
|
1295
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1296
|
+
"SBO_0000118"
|
|
1297
|
+
)
|
|
1298
|
+
|
|
1299
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, two reactants, three products, continuous scheme
|
|
1300
|
+
SBO_0000119 = "SBO_0000119"
|
|
1301
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__TWO_REACTANTS__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1302
|
+
"SBO_0000119"
|
|
1303
|
+
)
|
|
1304
|
+
|
|
1305
|
+
# mass action rate law for third order forward, reversible reactions, three reactants
|
|
1306
|
+
SBO_0000120 = "SBO_0000120"
|
|
1307
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__REVERSIBLE_REACTIONS__THREE_REACTANTS = (
|
|
1308
|
+
"SBO_0000120"
|
|
1309
|
+
)
|
|
1310
|
+
|
|
1311
|
+
# mass action rate law for third order forward, zeroth order reverse, reversible reactions, three reactants, continuous scheme
|
|
1312
|
+
SBO_0000121 = "SBO_0000121"
|
|
1313
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__ZEROTH_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__CONTINUOUS_SCHEME = (
|
|
1314
|
+
"SBO_0000121"
|
|
1315
|
+
)
|
|
1316
|
+
|
|
1317
|
+
# mass action rate law for third order forward, first order reverse, reversible reactions, three reactants, continuous scheme
|
|
1318
|
+
SBO_0000122 = "SBO_0000122"
|
|
1319
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__CONTINUOUS_SCHEME = (
|
|
1320
|
+
"SBO_0000122"
|
|
1321
|
+
)
|
|
1322
|
+
|
|
1323
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, three reactants
|
|
1324
|
+
SBO_0000123 = "SBO_0000123"
|
|
1325
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS = (
|
|
1326
|
+
"SBO_0000123"
|
|
1327
|
+
)
|
|
1328
|
+
|
|
1329
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, three reactants, one product, continuous scheme
|
|
1330
|
+
SBO_0000124 = "SBO_0000124"
|
|
1331
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1332
|
+
"SBO_0000124"
|
|
1333
|
+
)
|
|
1334
|
+
|
|
1335
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, three reactants, two products, continuous scheme
|
|
1336
|
+
SBO_0000125 = "SBO_0000125"
|
|
1337
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1338
|
+
"SBO_0000125"
|
|
1339
|
+
)
|
|
1340
|
+
|
|
1341
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, three reactants
|
|
1342
|
+
SBO_0000126 = "SBO_0000126"
|
|
1343
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS = (
|
|
1344
|
+
"SBO_0000126"
|
|
1345
|
+
)
|
|
1346
|
+
|
|
1347
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, three reactants, one product, continuous scheme
|
|
1348
|
+
SBO_0000127 = "SBO_0000127"
|
|
1349
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1350
|
+
"SBO_0000127"
|
|
1351
|
+
)
|
|
1352
|
+
|
|
1353
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, three reactants, two products, continuous scheme
|
|
1354
|
+
SBO_0000128 = "SBO_0000128"
|
|
1355
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1356
|
+
"SBO_0000128"
|
|
1357
|
+
)
|
|
1358
|
+
|
|
1359
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, three reactants, three products, continuous scheme
|
|
1360
|
+
SBO_0000129 = "SBO_0000129"
|
|
1361
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__THREE_REACTANTS__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1362
|
+
"SBO_0000129"
|
|
1363
|
+
)
|
|
1364
|
+
|
|
1365
|
+
# mass action rate law for third order forward, reversible reactions, one reactant
|
|
1366
|
+
SBO_0000130 = "SBO_0000130"
|
|
1367
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__REVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
1368
|
+
"SBO_0000130"
|
|
1369
|
+
)
|
|
1370
|
+
|
|
1371
|
+
# mass action rate law for third order forward, zeroth order reverse, reversible reactions, one reactant, continuous scheme
|
|
1372
|
+
SBO_0000131 = "SBO_0000131"
|
|
1373
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__ZEROTH_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__CONTINUOUS_SCHEME = (
|
|
1374
|
+
"SBO_0000131"
|
|
1375
|
+
)
|
|
1376
|
+
|
|
1377
|
+
# mass action rate law for third order forward, first order reverse, reversible reactions, one reactant, continuous scheme
|
|
1378
|
+
SBO_0000132 = "SBO_0000132"
|
|
1379
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__FIRST_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__CONTINUOUS_SCHEME = (
|
|
1380
|
+
"SBO_0000132"
|
|
1381
|
+
)
|
|
1382
|
+
|
|
1383
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, one reactant
|
|
1384
|
+
SBO_0000133 = "SBO_0000133"
|
|
1385
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
1386
|
+
"SBO_0000133"
|
|
1387
|
+
)
|
|
1388
|
+
|
|
1389
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, one reactant, one product, continuous scheme
|
|
1390
|
+
SBO_0000134 = "SBO_0000134"
|
|
1391
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1392
|
+
"SBO_0000134"
|
|
1393
|
+
)
|
|
1394
|
+
|
|
1395
|
+
# mass action rate law for third order forward, second order reverse, reversible reactions, one reactant, two products, continuous scheme
|
|
1396
|
+
SBO_0000135 = "SBO_0000135"
|
|
1397
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__SECOND_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1398
|
+
"SBO_0000135"
|
|
1399
|
+
)
|
|
1400
|
+
|
|
1401
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, one reactant
|
|
1402
|
+
SBO_0000136 = "SBO_0000136"
|
|
1403
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT = (
|
|
1404
|
+
"SBO_0000136"
|
|
1405
|
+
)
|
|
1406
|
+
|
|
1407
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, one reactant, one product, continuous scheme
|
|
1408
|
+
SBO_0000137 = "SBO_0000137"
|
|
1409
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__ONE_PRODUCT__CONTINUOUS_SCHEME = (
|
|
1410
|
+
"SBO_0000137"
|
|
1411
|
+
)
|
|
1412
|
+
|
|
1413
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, one reactant, two products, continuous scheme
|
|
1414
|
+
SBO_0000138 = "SBO_0000138"
|
|
1415
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__TWO_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1416
|
+
"SBO_0000138"
|
|
1417
|
+
)
|
|
1418
|
+
|
|
1419
|
+
# mass action rate law for third order forward, third order reverse, reversible reactions, one reactant, three products, continuous scheme
|
|
1420
|
+
SBO_0000139 = "SBO_0000139"
|
|
1421
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_FORWARD__THIRD_ORDER_REVERSE__REVERSIBLE_REACTIONS__ONE_REACTANT__THREE_PRODUCTS__CONTINUOUS_SCHEME = (
|
|
1422
|
+
"SBO_0000139"
|
|
1423
|
+
)
|
|
1424
|
+
|
|
1425
|
+
# mass action rate law for zeroth order irreversible reactions, discrete scheme
|
|
1426
|
+
SBO_0000140 = "SBO_0000140"
|
|
1427
|
+
MASS_ACTION_RATE_LAW_FOR_ZEROTH_ORDER_IRREVERSIBLE_REACTIONS__DISCRETE_SCHEME = (
|
|
1428
|
+
"SBO_0000140"
|
|
1429
|
+
)
|
|
1430
|
+
|
|
1431
|
+
# mass action rate law for first order irreversible reactions, discrete scheme
|
|
1432
|
+
SBO_0000141 = "SBO_0000141"
|
|
1433
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_IRREVERSIBLE_REACTIONS__DISCRETE_SCHEME = (
|
|
1434
|
+
"SBO_0000141"
|
|
1435
|
+
)
|
|
1436
|
+
|
|
1437
|
+
# mass action rate law for second order irreversible reactions, one reactant, discrete scheme
|
|
1438
|
+
SBO_0000142 = "SBO_0000142"
|
|
1439
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__DISCRETE_SCHEME = (
|
|
1440
|
+
"SBO_0000142"
|
|
1441
|
+
)
|
|
1442
|
+
|
|
1443
|
+
# mass action rate law for second order irreversible reactions, two reactants, discrete scheme
|
|
1444
|
+
SBO_0000143 = "SBO_0000143"
|
|
1445
|
+
MASS_ACTION_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__TWO_REACTANTS__DISCRETE_SCHEME = (
|
|
1446
|
+
"SBO_0000143"
|
|
1447
|
+
)
|
|
1448
|
+
|
|
1449
|
+
# mass action rate law for third order irreversible reactions, one reactant, discrete scheme
|
|
1450
|
+
SBO_0000144 = "SBO_0000144"
|
|
1451
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__DISCRETE_SCHEME = (
|
|
1452
|
+
"SBO_0000144"
|
|
1453
|
+
)
|
|
1454
|
+
|
|
1455
|
+
# mass action rate law for third order irreversible reactions, two reactants, discrete scheme
|
|
1456
|
+
SBO_0000145 = "SBO_0000145"
|
|
1457
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__TWO_REACTANTS__DISCRETE_SCHEME = (
|
|
1458
|
+
"SBO_0000145"
|
|
1459
|
+
)
|
|
1460
|
+
|
|
1461
|
+
# mass action rate law for third order irreversible reactions, three reactants, discrete scheme
|
|
1462
|
+
SBO_0000146 = "SBO_0000146"
|
|
1463
|
+
MASS_ACTION_RATE_LAW_FOR_THIRD_ORDER_IRREVERSIBLE_REACTIONS__THREE_REACTANTS__DISCRETE_SCHEME = (
|
|
1464
|
+
"SBO_0000146"
|
|
1465
|
+
)
|
|
1466
|
+
|
|
1467
|
+
# thermodynamic temperature
|
|
1468
|
+
SBO_0000147 = "SBO_0000147"
|
|
1469
|
+
THERMODYNAMIC_TEMPERATURE = "SBO_0000147"
|
|
1470
|
+
|
|
1471
|
+
# temperature difference
|
|
1472
|
+
SBO_0000148 = "SBO_0000148"
|
|
1473
|
+
TEMPERATURE_DIFFERENCE = "SBO_0000148"
|
|
1474
|
+
|
|
1475
|
+
# number of substrates
|
|
1476
|
+
SBO_0000149 = "SBO_0000149"
|
|
1477
|
+
NUMBER_OF_SUBSTRATES = "SBO_0000149"
|
|
1478
|
+
|
|
1479
|
+
# enzymatic rate law for irreversible non-modulated non-interacting reactant enzymes
|
|
1480
|
+
SBO_0000150 = "SBO_0000150"
|
|
1481
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_NON_MODULATED_NON_INTERACTING_REACTANT_ENZYMES = (
|
|
1482
|
+
"SBO_0000150"
|
|
1483
|
+
)
|
|
1484
|
+
|
|
1485
|
+
# enzymatic rate law for irreversible non-modulated non-interacting bireactant enzymes
|
|
1486
|
+
SBO_0000151 = "SBO_0000151"
|
|
1487
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_NON_MODULATED_NON_INTERACTING_BIREACTANT_ENZYMES = (
|
|
1488
|
+
"SBO_0000151"
|
|
1489
|
+
)
|
|
1490
|
+
|
|
1491
|
+
# enzymatic rate law for irreversible non-modulated non-interacting trireactant enzymes
|
|
1492
|
+
SBO_0000152 = "SBO_0000152"
|
|
1493
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_NON_MODULATED_NON_INTERACTING_TRIREACTANT_ENZYMES = (
|
|
1494
|
+
"SBO_0000152"
|
|
1495
|
+
)
|
|
1496
|
+
|
|
1497
|
+
# forward rate constant
|
|
1498
|
+
SBO_0000153 = "SBO_0000153"
|
|
1499
|
+
FORWARD_RATE_CONSTANT = "SBO_0000153"
|
|
1500
|
+
|
|
1501
|
+
# forward rate constant, continuous case
|
|
1502
|
+
SBO_0000154 = "SBO_0000154"
|
|
1503
|
+
FORWARD_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000154"
|
|
1504
|
+
|
|
1505
|
+
# forward rate constant, discrete case
|
|
1506
|
+
SBO_0000155 = "SBO_0000155"
|
|
1507
|
+
FORWARD_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000155"
|
|
1508
|
+
|
|
1509
|
+
# reverse rate constant
|
|
1510
|
+
SBO_0000156 = "SBO_0000156"
|
|
1511
|
+
REVERSE_RATE_CONSTANT = "SBO_0000156"
|
|
1512
|
+
|
|
1513
|
+
# number of reactants
|
|
1514
|
+
SBO_0000157 = "SBO_0000157"
|
|
1515
|
+
NUMBER_OF_REACTANTS = "SBO_0000157"
|
|
1516
|
+
|
|
1517
|
+
# order of a reaction with respect to a reactant
|
|
1518
|
+
SBO_0000158 = "SBO_0000158"
|
|
1519
|
+
ORDER_OF_A_REACTION_WITH_RESPECT_TO_A_REACTANT = "SBO_0000158"
|
|
1520
|
+
|
|
1521
|
+
# non-integral order rate constant
|
|
1522
|
+
SBO_0000159 = "SBO_0000159"
|
|
1523
|
+
NON_INTEGRAL_ORDER_RATE_CONSTANT = "SBO_0000159"
|
|
1524
|
+
|
|
1525
|
+
# forward non-integral order rate constant
|
|
1526
|
+
SBO_0000160 = "SBO_0000160"
|
|
1527
|
+
FORWARD_NON_INTEGRAL_ORDER_RATE_CONSTANT = "SBO_0000160"
|
|
1528
|
+
|
|
1529
|
+
# reverse non-integral order rate constant
|
|
1530
|
+
SBO_0000161 = "SBO_0000161"
|
|
1531
|
+
REVERSE_NON_INTEGRAL_ORDER_RATE_CONSTANT = "SBO_0000161"
|
|
1532
|
+
|
|
1533
|
+
# forward zeroth order rate constant
|
|
1534
|
+
SBO_0000162 = "SBO_0000162"
|
|
1535
|
+
FORWARD_ZEROTH_ORDER_RATE_CONSTANT = "SBO_0000162"
|
|
1536
|
+
|
|
1537
|
+
# mass action rate law for irreversible reactions, continuous scheme
|
|
1538
|
+
SBO_0000163 = "SBO_0000163"
|
|
1539
|
+
MASS_ACTION_RATE_LAW_FOR_IRREVERSIBLE_REACTIONS__CONTINUOUS_SCHEME = "SBO_0000163"
|
|
1540
|
+
|
|
1541
|
+
# second order irreversible mass action kinetics, continuous scheme
|
|
1542
|
+
SBO_0000164 = "SBO_0000164"
|
|
1543
|
+
SECOND_ORDER_IRREVERSIBLE_MASS_ACTION_KINETICS__CONTINUOUS_SCHEME = "SBO_0000164"
|
|
1544
|
+
|
|
1545
|
+
# third order irreversible mass action kinetics, continuous scheme
|
|
1546
|
+
SBO_0000165 = "SBO_0000165"
|
|
1547
|
+
THIRD_ORDER_IRREVERSIBLE_MASS_ACTION_KINETICS__CONTINUOUS_SCHEME = "SBO_0000165"
|
|
1548
|
+
|
|
1549
|
+
# mass action rate law for irreversible reactions, discrete scheme
|
|
1550
|
+
SBO_0000166 = "SBO_0000166"
|
|
1551
|
+
MASS_ACTION_RATE_LAW_FOR_IRREVERSIBLE_REACTIONS__DISCRETE_SCHEME = "SBO_0000166"
|
|
1552
|
+
|
|
1553
|
+
# biochemical or transport reaction
|
|
1554
|
+
SBO_0000167 = "SBO_0000167"
|
|
1555
|
+
BIOCHEMICAL_OR_TRANSPORT_REACTION = "SBO_0000167"
|
|
1556
|
+
|
|
1557
|
+
# control
|
|
1558
|
+
SBO_0000168 = "SBO_0000168"
|
|
1559
|
+
CONTROL = "SBO_0000168"
|
|
1560
|
+
|
|
1561
|
+
# inhibition
|
|
1562
|
+
SBO_0000169 = "SBO_0000169"
|
|
1563
|
+
INHIBITION = "SBO_0000169"
|
|
1564
|
+
|
|
1565
|
+
# stimulation
|
|
1566
|
+
SBO_0000170 = "SBO_0000170"
|
|
1567
|
+
STIMULATION = "SBO_0000170"
|
|
1568
|
+
|
|
1569
|
+
# necessary stimulation
|
|
1570
|
+
SBO_0000171 = "SBO_0000171"
|
|
1571
|
+
NECESSARY_STIMULATION = "SBO_0000171"
|
|
1572
|
+
|
|
1573
|
+
# catalysis
|
|
1574
|
+
SBO_0000172 = "SBO_0000172"
|
|
1575
|
+
CATALYSIS = "SBO_0000172"
|
|
1576
|
+
|
|
1577
|
+
# and
|
|
1578
|
+
SBO_0000173 = "SBO_0000173"
|
|
1579
|
+
AND = "SBO_0000173"
|
|
1580
|
+
|
|
1581
|
+
# or
|
|
1582
|
+
SBO_0000174 = "SBO_0000174"
|
|
1583
|
+
OR = "SBO_0000174"
|
|
1584
|
+
|
|
1585
|
+
# xor
|
|
1586
|
+
SBO_0000175 = "SBO_0000175"
|
|
1587
|
+
XOR = "SBO_0000175"
|
|
1588
|
+
|
|
1589
|
+
# biochemical reaction
|
|
1590
|
+
SBO_0000176 = "SBO_0000176"
|
|
1591
|
+
BIOCHEMICAL_REACTION = "SBO_0000176"
|
|
1592
|
+
|
|
1593
|
+
# non-covalent binding
|
|
1594
|
+
SBO_0000177 = "SBO_0000177"
|
|
1595
|
+
NON_COVALENT_BINDING = "SBO_0000177"
|
|
1596
|
+
|
|
1597
|
+
# cleavage
|
|
1598
|
+
SBO_0000178 = "SBO_0000178"
|
|
1599
|
+
CLEAVAGE = "SBO_0000178"
|
|
1600
|
+
|
|
1601
|
+
# degradation
|
|
1602
|
+
SBO_0000179 = "SBO_0000179"
|
|
1603
|
+
DEGRADATION = "SBO_0000179"
|
|
1604
|
+
|
|
1605
|
+
# dissociation
|
|
1606
|
+
SBO_0000180 = "SBO_0000180"
|
|
1607
|
+
DISSOCIATION = "SBO_0000180"
|
|
1608
|
+
|
|
1609
|
+
# conformational transition
|
|
1610
|
+
SBO_0000181 = "SBO_0000181"
|
|
1611
|
+
CONFORMATIONAL_TRANSITION = "SBO_0000181"
|
|
1612
|
+
|
|
1613
|
+
# conversion
|
|
1614
|
+
SBO_0000182 = "SBO_0000182"
|
|
1615
|
+
CONVERSION = "SBO_0000182"
|
|
1616
|
+
|
|
1617
|
+
# transcription
|
|
1618
|
+
SBO_0000183 = "SBO_0000183"
|
|
1619
|
+
TRANSCRIPTION = "SBO_0000183"
|
|
1620
|
+
|
|
1621
|
+
# translation
|
|
1622
|
+
SBO_0000184 = "SBO_0000184"
|
|
1623
|
+
TRANSLATION = "SBO_0000184"
|
|
1624
|
+
|
|
1625
|
+
# translocation reaction
|
|
1626
|
+
SBO_0000185 = "SBO_0000185"
|
|
1627
|
+
TRANSLOCATION_REACTION = "SBO_0000185"
|
|
1628
|
+
|
|
1629
|
+
# maximal velocity
|
|
1630
|
+
SBO_0000186 = "SBO_0000186"
|
|
1631
|
+
MAXIMAL_VELOCITY = "SBO_0000186"
|
|
1632
|
+
|
|
1633
|
+
# Henri-Michaelis-Menten equation, Vmax form
|
|
1634
|
+
SBO_0000187 = "SBO_0000187"
|
|
1635
|
+
HENRI_MICHAELIS_MENTEN_EQUATION__VMAX_FORM = "SBO_0000187"
|
|
1636
|
+
|
|
1637
|
+
# number of biochemical items
|
|
1638
|
+
SBO_0000188 = "SBO_0000188"
|
|
1639
|
+
NUMBER_OF_BIOCHEMICAL_ITEMS = "SBO_0000188"
|
|
1640
|
+
|
|
1641
|
+
# number of binding sites
|
|
1642
|
+
SBO_0000189 = "SBO_0000189"
|
|
1643
|
+
NUMBER_OF_BINDING_SITES = "SBO_0000189"
|
|
1644
|
+
|
|
1645
|
+
# Hill coefficient
|
|
1646
|
+
SBO_0000190 = "SBO_0000190"
|
|
1647
|
+
HILL_COEFFICIENT = "SBO_0000190"
|
|
1648
|
+
|
|
1649
|
+
# Hill constant
|
|
1650
|
+
SBO_0000191 = "SBO_0000191"
|
|
1651
|
+
HILL_CONSTANT = "SBO_0000191"
|
|
1652
|
+
|
|
1653
|
+
# Hill-type rate law, generalised form
|
|
1654
|
+
SBO_0000192 = "SBO_0000192"
|
|
1655
|
+
HILL_TYPE_RATE_LAW__GENERALISED_FORM = "SBO_0000192"
|
|
1656
|
+
|
|
1657
|
+
# equilibrium or steady-state constant
|
|
1658
|
+
SBO_0000193 = "SBO_0000193"
|
|
1659
|
+
EQUILIBRIUM_OR_STEADY_STATE_CONSTANT = "SBO_0000193"
|
|
1660
|
+
|
|
1661
|
+
# pseudo-dissociation constant
|
|
1662
|
+
SBO_0000194 = "SBO_0000194"
|
|
1663
|
+
PSEUDO_DISSOCIATION_CONSTANT = "SBO_0000194"
|
|
1664
|
+
|
|
1665
|
+
# Hill-type rate law, microscopic form
|
|
1666
|
+
SBO_0000195 = "SBO_0000195"
|
|
1667
|
+
HILL_TYPE_RATE_LAW__MICROSCOPIC_FORM = "SBO_0000195"
|
|
1668
|
+
|
|
1669
|
+
# concentration of an entity pool
|
|
1670
|
+
SBO_0000196 = "SBO_0000196"
|
|
1671
|
+
CONCENTRATION_OF_AN_ENTITY_POOL = "SBO_0000196"
|
|
1672
|
+
|
|
1673
|
+
# specific concentration of an entity
|
|
1674
|
+
SBO_0000197 = "SBO_0000197"
|
|
1675
|
+
SPECIFIC_CONCENTRATION_OF_AN_ENTITY = "SBO_0000197"
|
|
1676
|
+
|
|
1677
|
+
# Hill-type rate law, reduced form
|
|
1678
|
+
SBO_0000198 = "SBO_0000198"
|
|
1679
|
+
HILL_TYPE_RATE_LAW__REDUCED_FORM = "SBO_0000198"
|
|
1680
|
+
|
|
1681
|
+
# normalised enzymatic rate law for unireactant enzymes
|
|
1682
|
+
SBO_0000199 = "SBO_0000199"
|
|
1683
|
+
NORMALISED_ENZYMATIC_RATE_LAW_FOR_UNIREACTANT_ENZYMES = "SBO_0000199"
|
|
1684
|
+
|
|
1685
|
+
# redox reaction
|
|
1686
|
+
SBO_0000200 = "SBO_0000200"
|
|
1687
|
+
REDOX_REACTION = "SBO_0000200"
|
|
1688
|
+
|
|
1689
|
+
# oxidation
|
|
1690
|
+
SBO_0000201 = "SBO_0000201"
|
|
1691
|
+
OXIDATION = "SBO_0000201"
|
|
1692
|
+
|
|
1693
|
+
# reduction
|
|
1694
|
+
SBO_0000202 = "SBO_0000202"
|
|
1695
|
+
REDUCTION = "SBO_0000202"
|
|
1696
|
+
|
|
1697
|
+
# duplication
|
|
1698
|
+
SBO_0000203 = "SBO_0000203"
|
|
1699
|
+
DUPLICATION = "SBO_0000203"
|
|
1700
|
+
|
|
1701
|
+
# DNA replication
|
|
1702
|
+
SBO_0000204 = "SBO_0000204"
|
|
1703
|
+
DNA_REPLICATION = "SBO_0000204"
|
|
1704
|
+
|
|
1705
|
+
# composite biochemical process
|
|
1706
|
+
SBO_0000205 = "SBO_0000205"
|
|
1707
|
+
COMPOSITE_BIOCHEMICAL_PROCESS = "SBO_0000205"
|
|
1708
|
+
|
|
1709
|
+
# competitive inhibitor
|
|
1710
|
+
SBO_0000206 = "SBO_0000206"
|
|
1711
|
+
COMPETITIVE_INHIBITOR = "SBO_0000206"
|
|
1712
|
+
|
|
1713
|
+
# non-competitive inhibitor
|
|
1714
|
+
SBO_0000207 = "SBO_0000207"
|
|
1715
|
+
NON_COMPETITIVE_INHIBITOR = "SBO_0000207"
|
|
1716
|
+
|
|
1717
|
+
# acid-base reaction
|
|
1718
|
+
SBO_0000208 = "SBO_0000208"
|
|
1719
|
+
ACID_BASE_REACTION = "SBO_0000208"
|
|
1720
|
+
|
|
1721
|
+
# ionisation
|
|
1722
|
+
SBO_0000209 = "SBO_0000209"
|
|
1723
|
+
IONISATION = "SBO_0000209"
|
|
1724
|
+
|
|
1725
|
+
# addition of a chemical group
|
|
1726
|
+
SBO_0000210 = "SBO_0000210"
|
|
1727
|
+
ADDITION_OF_A_CHEMICAL_GROUP = "SBO_0000210"
|
|
1728
|
+
|
|
1729
|
+
# removal of a chemical group
|
|
1730
|
+
SBO_0000211 = "SBO_0000211"
|
|
1731
|
+
REMOVAL_OF_A_CHEMICAL_GROUP = "SBO_0000211"
|
|
1732
|
+
|
|
1733
|
+
# protonation
|
|
1734
|
+
SBO_0000212 = "SBO_0000212"
|
|
1735
|
+
PROTONATION = "SBO_0000212"
|
|
1736
|
+
|
|
1737
|
+
# deprotonation
|
|
1738
|
+
SBO_0000213 = "SBO_0000213"
|
|
1739
|
+
DEPROTONATION = "SBO_0000213"
|
|
1740
|
+
|
|
1741
|
+
# methylation
|
|
1742
|
+
SBO_0000214 = "SBO_0000214"
|
|
1743
|
+
METHYLATION = "SBO_0000214"
|
|
1744
|
+
|
|
1745
|
+
# acetylation
|
|
1746
|
+
SBO_0000215 = "SBO_0000215"
|
|
1747
|
+
ACETYLATION = "SBO_0000215"
|
|
1748
|
+
|
|
1749
|
+
# phosphorylation
|
|
1750
|
+
SBO_0000216 = "SBO_0000216"
|
|
1751
|
+
PHOSPHORYLATION = "SBO_0000216"
|
|
1752
|
+
|
|
1753
|
+
# glycosylation
|
|
1754
|
+
SBO_0000217 = "SBO_0000217"
|
|
1755
|
+
GLYCOSYLATION = "SBO_0000217"
|
|
1756
|
+
|
|
1757
|
+
# palmitoylation
|
|
1758
|
+
SBO_0000218 = "SBO_0000218"
|
|
1759
|
+
PALMITOYLATION = "SBO_0000218"
|
|
1760
|
+
|
|
1761
|
+
# myristoylation
|
|
1762
|
+
SBO_0000219 = "SBO_0000219"
|
|
1763
|
+
MYRISTOYLATION = "SBO_0000219"
|
|
1764
|
+
|
|
1765
|
+
# sulfation
|
|
1766
|
+
SBO_0000220 = "SBO_0000220"
|
|
1767
|
+
SULFATION = "SBO_0000220"
|
|
1768
|
+
|
|
1769
|
+
# prenylation
|
|
1770
|
+
SBO_0000221 = "SBO_0000221"
|
|
1771
|
+
PRENYLATION = "SBO_0000221"
|
|
1772
|
+
|
|
1773
|
+
# farnesylation
|
|
1774
|
+
SBO_0000222 = "SBO_0000222"
|
|
1775
|
+
FARNESYLATION = "SBO_0000222"
|
|
1776
|
+
|
|
1777
|
+
# geranylgeranylation
|
|
1778
|
+
SBO_0000223 = "SBO_0000223"
|
|
1779
|
+
GERANYLGERANYLATION = "SBO_0000223"
|
|
1780
|
+
|
|
1781
|
+
# ubiquitination
|
|
1782
|
+
SBO_0000224 = "SBO_0000224"
|
|
1783
|
+
UBIQUITINATION = "SBO_0000224"
|
|
1784
|
+
|
|
1785
|
+
# delay
|
|
1786
|
+
SBO_0000225 = "SBO_0000225"
|
|
1787
|
+
DELAY = "SBO_0000225"
|
|
1788
|
+
|
|
1789
|
+
# density of an entity pool
|
|
1790
|
+
SBO_0000226 = "SBO_0000226"
|
|
1791
|
+
DENSITY_OF_AN_ENTITY_POOL = "SBO_0000226"
|
|
1792
|
+
|
|
1793
|
+
# mass density of an entity
|
|
1794
|
+
SBO_0000227 = "SBO_0000227"
|
|
1795
|
+
MASS_DENSITY_OF_AN_ENTITY = "SBO_0000227"
|
|
1796
|
+
|
|
1797
|
+
# volume density of an entity
|
|
1798
|
+
SBO_0000228 = "SBO_0000228"
|
|
1799
|
+
VOLUME_DENSITY_OF_AN_ENTITY = "SBO_0000228"
|
|
1800
|
+
|
|
1801
|
+
# area density of an entity
|
|
1802
|
+
SBO_0000229 = "SBO_0000229"
|
|
1803
|
+
AREA_DENSITY_OF_AN_ENTITY = "SBO_0000229"
|
|
1804
|
+
|
|
1805
|
+
# linear density of an entity
|
|
1806
|
+
SBO_0000230 = "SBO_0000230"
|
|
1807
|
+
LINEAR_DENSITY_OF_AN_ENTITY = "SBO_0000230"
|
|
1808
|
+
|
|
1809
|
+
# occurring entity representation
|
|
1810
|
+
SBO_0000231 = "SBO_0000231"
|
|
1811
|
+
OCCURRING_ENTITY_REPRESENTATION = "SBO_0000231"
|
|
1812
|
+
|
|
1813
|
+
# obsolete event
|
|
1814
|
+
SBO_0000232 = "SBO_0000232"
|
|
1815
|
+
OBSOLETE_EVENT = "SBO_0000232"
|
|
1816
|
+
|
|
1817
|
+
# hydroxylation
|
|
1818
|
+
SBO_0000233 = "SBO_0000233"
|
|
1819
|
+
HYDROXYLATION = "SBO_0000233"
|
|
1820
|
+
|
|
1821
|
+
# logical framework
|
|
1822
|
+
SBO_0000234 = "SBO_0000234"
|
|
1823
|
+
LOGICAL_FRAMEWORK = "SBO_0000234"
|
|
1824
|
+
|
|
1825
|
+
# participant
|
|
1826
|
+
SBO_0000235 = "SBO_0000235"
|
|
1827
|
+
PARTICIPANT = "SBO_0000235"
|
|
1828
|
+
|
|
1829
|
+
# physical entity representation
|
|
1830
|
+
SBO_0000236 = "SBO_0000236"
|
|
1831
|
+
PHYSICAL_ENTITY_REPRESENTATION = "SBO_0000236"
|
|
1832
|
+
|
|
1833
|
+
# logical combination
|
|
1834
|
+
SBO_0000237 = "SBO_0000237"
|
|
1835
|
+
LOGICAL_COMBINATION = "SBO_0000237"
|
|
1836
|
+
|
|
1837
|
+
# not
|
|
1838
|
+
SBO_0000238 = "SBO_0000238"
|
|
1839
|
+
NOT = "SBO_0000238"
|
|
1840
|
+
|
|
1841
|
+
# allosteric control
|
|
1842
|
+
SBO_0000239 = "SBO_0000239"
|
|
1843
|
+
ALLOSTERIC_CONTROL = "SBO_0000239"
|
|
1844
|
+
|
|
1845
|
+
# material entity
|
|
1846
|
+
SBO_0000240 = "SBO_0000240"
|
|
1847
|
+
MATERIAL_ENTITY = "SBO_0000240"
|
|
1848
|
+
|
|
1849
|
+
# functional entity
|
|
1850
|
+
SBO_0000241 = "SBO_0000241"
|
|
1851
|
+
FUNCTIONAL_ENTITY = "SBO_0000241"
|
|
1852
|
+
|
|
1853
|
+
# channel
|
|
1854
|
+
SBO_0000242 = "SBO_0000242"
|
|
1855
|
+
CHANNEL = "SBO_0000242"
|
|
1856
|
+
|
|
1857
|
+
# gene
|
|
1858
|
+
SBO_0000243 = "SBO_0000243"
|
|
1859
|
+
GENE = "SBO_0000243"
|
|
1860
|
+
|
|
1861
|
+
# receptor
|
|
1862
|
+
SBO_0000244 = "SBO_0000244"
|
|
1863
|
+
RECEPTOR = "SBO_0000244"
|
|
1864
|
+
|
|
1865
|
+
# macromolecule
|
|
1866
|
+
SBO_0000245 = "SBO_0000245"
|
|
1867
|
+
MACROMOLECULE = "SBO_0000245"
|
|
1868
|
+
|
|
1869
|
+
# information macromolecule
|
|
1870
|
+
SBO_0000246 = "SBO_0000246"
|
|
1871
|
+
INFORMATION_MACROMOLECULE = "SBO_0000246"
|
|
1872
|
+
|
|
1873
|
+
# simple chemical
|
|
1874
|
+
SBO_0000247 = "SBO_0000247"
|
|
1875
|
+
SIMPLE_CHEMICAL = "SBO_0000247"
|
|
1876
|
+
|
|
1877
|
+
# chemical macromolecule
|
|
1878
|
+
SBO_0000248 = "SBO_0000248"
|
|
1879
|
+
CHEMICAL_MACROMOLECULE = "SBO_0000248"
|
|
1880
|
+
|
|
1881
|
+
# polysaccharide
|
|
1882
|
+
SBO_0000249 = "SBO_0000249"
|
|
1883
|
+
POLYSACCHARIDE = "SBO_0000249"
|
|
1884
|
+
|
|
1885
|
+
# ribonucleic acid
|
|
1886
|
+
SBO_0000250 = "SBO_0000250"
|
|
1887
|
+
RIBONUCLEIC_ACID = "SBO_0000250"
|
|
1888
|
+
|
|
1889
|
+
# deoxyribonucleic acid
|
|
1890
|
+
SBO_0000251 = "SBO_0000251"
|
|
1891
|
+
DEOXYRIBONUCLEIC_ACID = "SBO_0000251"
|
|
1892
|
+
|
|
1893
|
+
# polypeptide chain
|
|
1894
|
+
SBO_0000252 = "SBO_0000252"
|
|
1895
|
+
POLYPEPTIDE_CHAIN = "SBO_0000252"
|
|
1896
|
+
|
|
1897
|
+
# non-covalent complex
|
|
1898
|
+
SBO_0000253 = "SBO_0000253"
|
|
1899
|
+
NON_COVALENT_COMPLEX = "SBO_0000253"
|
|
1900
|
+
|
|
1901
|
+
# electrical resistance
|
|
1902
|
+
SBO_0000254 = "SBO_0000254"
|
|
1903
|
+
ELECTRICAL_RESISTANCE = "SBO_0000254"
|
|
1904
|
+
|
|
1905
|
+
# physical characteristic
|
|
1906
|
+
SBO_0000255 = "SBO_0000255"
|
|
1907
|
+
PHYSICAL_CHARACTERISTIC = "SBO_0000255"
|
|
1908
|
+
|
|
1909
|
+
# biochemical parameter
|
|
1910
|
+
SBO_0000256 = "SBO_0000256"
|
|
1911
|
+
BIOCHEMICAL_PARAMETER = "SBO_0000256"
|
|
1912
|
+
|
|
1913
|
+
# conductance
|
|
1914
|
+
SBO_0000257 = "SBO_0000257"
|
|
1915
|
+
CONDUCTANCE = "SBO_0000257"
|
|
1916
|
+
|
|
1917
|
+
# capacitance
|
|
1918
|
+
SBO_0000258 = "SBO_0000258"
|
|
1919
|
+
CAPACITANCE = "SBO_0000258"
|
|
1920
|
+
|
|
1921
|
+
# voltage
|
|
1922
|
+
SBO_0000259 = "SBO_0000259"
|
|
1923
|
+
VOLTAGE = "SBO_0000259"
|
|
1924
|
+
|
|
1925
|
+
# enzymatic rate law for simple competitive inhibition of irreversible unireactant enzymes by one inhibitor
|
|
1926
|
+
SBO_0000260 = "SBO_0000260"
|
|
1927
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_ONE_INHIBITOR = (
|
|
1928
|
+
"SBO_0000260"
|
|
1929
|
+
)
|
|
1930
|
+
|
|
1931
|
+
# inhibitory constant
|
|
1932
|
+
SBO_0000261 = "SBO_0000261"
|
|
1933
|
+
INHIBITORY_CONSTANT = "SBO_0000261"
|
|
1934
|
+
|
|
1935
|
+
# enzymatic rate law for simple uncompetitive inhibition of irreversible unireactant enzymes
|
|
1936
|
+
SBO_0000262 = "SBO_0000262"
|
|
1937
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_UNCOMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES = (
|
|
1938
|
+
"SBO_0000262"
|
|
1939
|
+
)
|
|
1940
|
+
|
|
1941
|
+
# relative equilibrium constant
|
|
1942
|
+
SBO_0000263 = "SBO_0000263"
|
|
1943
|
+
RELATIVE_EQUILIBRIUM_CONSTANT = "SBO_0000263"
|
|
1944
|
+
|
|
1945
|
+
# relative inhibition constant
|
|
1946
|
+
SBO_0000264 = "SBO_0000264"
|
|
1947
|
+
RELATIVE_INHIBITION_CONSTANT = "SBO_0000264"
|
|
1948
|
+
|
|
1949
|
+
# enzymatic rate law for simple mixed-type inhibition of irreversible unireactant enzymes
|
|
1950
|
+
SBO_0000265 = "SBO_0000265"
|
|
1951
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_MIXED_TYPE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES = (
|
|
1952
|
+
"SBO_0000265"
|
|
1953
|
+
)
|
|
1954
|
+
|
|
1955
|
+
# enzymatic rate law for simple irreversible non-competitive inhibition of unireactant enzymes
|
|
1956
|
+
SBO_0000266 = "SBO_0000266"
|
|
1957
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_IRREVERSIBLE_NON_COMPETITIVE_INHIBITION_OF_UNIREACTANT_ENZYMES = (
|
|
1958
|
+
"SBO_0000266"
|
|
1959
|
+
)
|
|
1960
|
+
|
|
1961
|
+
# enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by one inhibitor
|
|
1962
|
+
SBO_0000267 = "SBO_0000267"
|
|
1963
|
+
ENZYMATIC_RATE_LAW_FOR_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_ONE_INHIBITOR = (
|
|
1964
|
+
"SBO_0000267"
|
|
1965
|
+
)
|
|
1966
|
+
|
|
1967
|
+
# enzymatic rate law
|
|
1968
|
+
SBO_0000268 = "SBO_0000268"
|
|
1969
|
+
ENZYMATIC_RATE_LAW = "SBO_0000268"
|
|
1970
|
+
|
|
1971
|
+
# enzymatic rate law for unireactant enzymes
|
|
1972
|
+
SBO_0000269 = "SBO_0000269"
|
|
1973
|
+
ENZYMATIC_RATE_LAW_FOR_UNIREACTANT_ENZYMES = "SBO_0000269"
|
|
1974
|
+
|
|
1975
|
+
# enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by exclusive inhibitors
|
|
1976
|
+
SBO_0000270 = "SBO_0000270"
|
|
1977
|
+
ENZYMATIC_RATE_LAW_FOR_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_EXCLUSIVE_INHIBITORS = (
|
|
1978
|
+
"SBO_0000270"
|
|
1979
|
+
)
|
|
1980
|
+
|
|
1981
|
+
# enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by two exclusive inhibitors
|
|
1982
|
+
SBO_0000271 = "SBO_0000271"
|
|
1983
|
+
ENZYMATIC_RATE_LAW_FOR_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_TWO_EXCLUSIVE_INHIBITORS = (
|
|
1984
|
+
"SBO_0000271"
|
|
1985
|
+
)
|
|
1986
|
+
|
|
1987
|
+
# number of inhibitors
|
|
1988
|
+
SBO_0000272 = "SBO_0000272"
|
|
1989
|
+
NUMBER_OF_INHIBITORS = "SBO_0000272"
|
|
1990
|
+
|
|
1991
|
+
# enzymatic rate law for competitive inhibition of irreversible unireactant enzymes by non-exclusive non-cooperative inhibitors
|
|
1992
|
+
SBO_0000273 = "SBO_0000273"
|
|
1993
|
+
ENZYMATIC_RATE_LAW_FOR_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_NON_EXCLUSIVE_NON_COOPERATIVE_INHIBITORS = (
|
|
1994
|
+
"SBO_0000273"
|
|
1995
|
+
)
|
|
1996
|
+
|
|
1997
|
+
# enzymatic rate law for simple competitive inhibition of irreversible unireactant enzymes by two non-exclusive, non-cooperative inhibitors
|
|
1998
|
+
SBO_0000274 = "SBO_0000274"
|
|
1999
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_TWO_NON_EXCLUSIVE__NON_COOPERATIVE_INHIBITORS = (
|
|
2000
|
+
"SBO_0000274"
|
|
2001
|
+
)
|
|
2002
|
+
|
|
2003
|
+
# enzymatic rate law for mixed-type inhibition of irreversible enzymes by mutually exclusive inhibitors
|
|
2004
|
+
SBO_0000275 = "SBO_0000275"
|
|
2005
|
+
ENZYMATIC_RATE_LAW_FOR_MIXED_TYPE_INHIBITION_OF_IRREVERSIBLE_ENZYMES_BY_MUTUALLY_EXCLUSIVE_INHIBITORS = (
|
|
2006
|
+
"SBO_0000275"
|
|
2007
|
+
)
|
|
2008
|
+
|
|
2009
|
+
# enzymatic rate law for mixed-type inhibition of irreversible unireactant enzymes by two inhibitors
|
|
2010
|
+
SBO_0000276 = "SBO_0000276"
|
|
2011
|
+
ENZYMATIC_RATE_LAW_FOR_MIXED_TYPE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_TWO_INHIBITORS = (
|
|
2012
|
+
"SBO_0000276"
|
|
2013
|
+
)
|
|
2014
|
+
|
|
2015
|
+
# enzymatic rate law for non-competitive inhibition of irreversible unireactant enzymes by two exclusively binding inhibitors
|
|
2016
|
+
SBO_0000277 = "SBO_0000277"
|
|
2017
|
+
ENZYMATIC_RATE_LAW_FOR_NON_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_TWO_EXCLUSIVELY_BINDING_INHIBITORS = (
|
|
2018
|
+
"SBO_0000277"
|
|
2019
|
+
)
|
|
2020
|
+
|
|
2021
|
+
# messenger RNA
|
|
2022
|
+
SBO_0000278 = "SBO_0000278"
|
|
2023
|
+
MESSENGER_RNA = "SBO_0000278"
|
|
2024
|
+
|
|
2025
|
+
# pressure
|
|
2026
|
+
SBO_0000279 = "SBO_0000279"
|
|
2027
|
+
PRESSURE = "SBO_0000279"
|
|
2028
|
+
|
|
2029
|
+
# ligand
|
|
2030
|
+
SBO_0000280 = "SBO_0000280"
|
|
2031
|
+
LIGAND = "SBO_0000280"
|
|
2032
|
+
|
|
2033
|
+
# equilibrium constant
|
|
2034
|
+
SBO_0000281 = "SBO_0000281"
|
|
2035
|
+
EQUILIBRIUM_CONSTANT = "SBO_0000281"
|
|
2036
|
+
|
|
2037
|
+
# dissociation constant
|
|
2038
|
+
SBO_0000282 = "SBO_0000282"
|
|
2039
|
+
DISSOCIATION_CONSTANT = "SBO_0000282"
|
|
2040
|
+
|
|
2041
|
+
# acid dissociation constant
|
|
2042
|
+
SBO_0000283 = "SBO_0000283"
|
|
2043
|
+
ACID_DISSOCIATION_CONSTANT = "SBO_0000283"
|
|
2044
|
+
|
|
2045
|
+
# transporter
|
|
2046
|
+
SBO_0000284 = "SBO_0000284"
|
|
2047
|
+
TRANSPORTER = "SBO_0000284"
|
|
2048
|
+
|
|
2049
|
+
# material entity of unspecified nature
|
|
2050
|
+
SBO_0000285 = "SBO_0000285"
|
|
2051
|
+
MATERIAL_ENTITY_OF_UNSPECIFIED_NATURE = "SBO_0000285"
|
|
2052
|
+
|
|
2053
|
+
# multimer
|
|
2054
|
+
SBO_0000286 = "SBO_0000286"
|
|
2055
|
+
MULTIMER = "SBO_0000286"
|
|
2056
|
+
|
|
2057
|
+
# EC50
|
|
2058
|
+
SBO_0000287 = "SBO_0000287"
|
|
2059
|
+
EC50 = "SBO_0000287"
|
|
2060
|
+
|
|
2061
|
+
# IC50
|
|
2062
|
+
SBO_0000288 = "SBO_0000288"
|
|
2063
|
+
IC50 = "SBO_0000288"
|
|
2064
|
+
|
|
2065
|
+
# functional compartment
|
|
2066
|
+
SBO_0000289 = "SBO_0000289"
|
|
2067
|
+
FUNCTIONAL_COMPARTMENT = "SBO_0000289"
|
|
2068
|
+
|
|
2069
|
+
# physical compartment
|
|
2070
|
+
SBO_0000290 = "SBO_0000290"
|
|
2071
|
+
PHYSICAL_COMPARTMENT = "SBO_0000290"
|
|
2072
|
+
|
|
2073
|
+
# empty set
|
|
2074
|
+
SBO_0000291 = "SBO_0000291"
|
|
2075
|
+
EMPTY_SET = "SBO_0000291"
|
|
2076
|
+
|
|
2077
|
+
# spatial continuous framework
|
|
2078
|
+
SBO_0000292 = "SBO_0000292"
|
|
2079
|
+
SPATIAL_CONTINUOUS_FRAMEWORK = "SBO_0000292"
|
|
2080
|
+
|
|
2081
|
+
# non-spatial continuous framework
|
|
2082
|
+
SBO_0000293 = "SBO_0000293"
|
|
2083
|
+
NON_SPATIAL_CONTINUOUS_FRAMEWORK = "SBO_0000293"
|
|
2084
|
+
|
|
2085
|
+
# spatial discrete framework
|
|
2086
|
+
SBO_0000294 = "SBO_0000294"
|
|
2087
|
+
SPATIAL_DISCRETE_FRAMEWORK = "SBO_0000294"
|
|
2088
|
+
|
|
2089
|
+
# non-spatial discrete framework
|
|
2090
|
+
SBO_0000295 = "SBO_0000295"
|
|
2091
|
+
NON_SPATIAL_DISCRETE_FRAMEWORK = "SBO_0000295"
|
|
2092
|
+
|
|
2093
|
+
# macromolecular complex
|
|
2094
|
+
SBO_0000296 = "SBO_0000296"
|
|
2095
|
+
MACROMOLECULAR_COMPLEX = "SBO_0000296"
|
|
2096
|
+
|
|
2097
|
+
# protein complex
|
|
2098
|
+
SBO_0000297 = "SBO_0000297"
|
|
2099
|
+
PROTEIN_COMPLEX = "SBO_0000297"
|
|
2100
|
+
|
|
2101
|
+
# synthetic chemical compound
|
|
2102
|
+
SBO_0000298 = "SBO_0000298"
|
|
2103
|
+
SYNTHETIC_CHEMICAL_COMPOUND = "SBO_0000298"
|
|
2104
|
+
|
|
2105
|
+
# metabolite
|
|
2106
|
+
SBO_0000299 = "SBO_0000299"
|
|
2107
|
+
METABOLITE = "SBO_0000299"
|
|
2108
|
+
|
|
2109
|
+
# total concentration of enzyme
|
|
2110
|
+
SBO_0000300 = "SBO_0000300"
|
|
2111
|
+
TOTAL_CONCENTRATION_OF_ENZYME = "SBO_0000300"
|
|
2112
|
+
|
|
2113
|
+
# total catalytic efficiency
|
|
2114
|
+
SBO_0000301 = "SBO_0000301"
|
|
2115
|
+
TOTAL_CATALYTIC_EFFICIENCY = "SBO_0000301"
|
|
2116
|
+
|
|
2117
|
+
# catalytic efficiency
|
|
2118
|
+
SBO_0000302 = "SBO_0000302"
|
|
2119
|
+
CATALYTIC_EFFICIENCY = "SBO_0000302"
|
|
2120
|
+
|
|
2121
|
+
# biochemical potential
|
|
2122
|
+
SBO_0000303 = "SBO_0000303"
|
|
2123
|
+
BIOCHEMICAL_POTENTIAL = "SBO_0000303"
|
|
2124
|
+
|
|
2125
|
+
# pH
|
|
2126
|
+
SBO_0000304 = "SBO_0000304"
|
|
2127
|
+
PH = "SBO_0000304"
|
|
2128
|
+
|
|
2129
|
+
# pOH
|
|
2130
|
+
SBO_0000305 = "SBO_0000305"
|
|
2131
|
+
POH = "SBO_0000305"
|
|
2132
|
+
|
|
2133
|
+
# pK
|
|
2134
|
+
SBO_0000306 = "SBO_0000306"
|
|
2135
|
+
PK = "SBO_0000306"
|
|
2136
|
+
|
|
2137
|
+
# pKa
|
|
2138
|
+
SBO_0000307 = "SBO_0000307"
|
|
2139
|
+
PKA = "SBO_0000307"
|
|
2140
|
+
|
|
2141
|
+
# equilibrium or steady-state characteristic
|
|
2142
|
+
SBO_0000308 = "SBO_0000308"
|
|
2143
|
+
EQUILIBRIUM_OR_STEADY_STATE_CHARACTERISTIC = "SBO_0000308"
|
|
2144
|
+
|
|
2145
|
+
# dissociation characteristic
|
|
2146
|
+
SBO_0000309 = "SBO_0000309"
|
|
2147
|
+
DISSOCIATION_CHARACTERISTIC = "SBO_0000309"
|
|
2148
|
+
|
|
2149
|
+
# acid dissociation characteristic
|
|
2150
|
+
SBO_0000310 = "SBO_0000310"
|
|
2151
|
+
ACID_DISSOCIATION_CHARACTERISTIC = "SBO_0000310"
|
|
2152
|
+
|
|
2153
|
+
# heterogeneous nuclear RNA
|
|
2154
|
+
SBO_0000311 = "SBO_0000311"
|
|
2155
|
+
HETEROGENEOUS_NUCLEAR_RNA = "SBO_0000311"
|
|
2156
|
+
|
|
2157
|
+
# mature messenger RNA
|
|
2158
|
+
SBO_0000312 = "SBO_0000312"
|
|
2159
|
+
MATURE_MESSENGER_RNA = "SBO_0000312"
|
|
2160
|
+
|
|
2161
|
+
# transfer RNA
|
|
2162
|
+
SBO_0000313 = "SBO_0000313"
|
|
2163
|
+
TRANSFER_RNA = "SBO_0000313"
|
|
2164
|
+
|
|
2165
|
+
# ribosomal RNA
|
|
2166
|
+
SBO_0000314 = "SBO_0000314"
|
|
2167
|
+
RIBOSOMAL_RNA = "SBO_0000314"
|
|
2168
|
+
|
|
2169
|
+
# ribozyme
|
|
2170
|
+
SBO_0000315 = "SBO_0000315"
|
|
2171
|
+
RIBOZYME = "SBO_0000315"
|
|
2172
|
+
|
|
2173
|
+
# microRNA
|
|
2174
|
+
SBO_0000316 = "SBO_0000316"
|
|
2175
|
+
MICRORNA = "SBO_0000316"
|
|
2176
|
+
|
|
2177
|
+
# small interfering RNA
|
|
2178
|
+
SBO_0000317 = "SBO_0000317"
|
|
2179
|
+
SMALL_INTERFERING_RNA = "SBO_0000317"
|
|
2180
|
+
|
|
2181
|
+
# small nuclear RNA
|
|
2182
|
+
SBO_0000318 = "SBO_0000318"
|
|
2183
|
+
SMALL_NUCLEAR_RNA = "SBO_0000318"
|
|
2184
|
+
|
|
2185
|
+
# small nucleolar RNA
|
|
2186
|
+
SBO_0000319 = "SBO_0000319"
|
|
2187
|
+
SMALL_NUCLEOLAR_RNA = "SBO_0000319"
|
|
2188
|
+
|
|
2189
|
+
# product catalytic rate constant
|
|
2190
|
+
SBO_0000320 = "SBO_0000320"
|
|
2191
|
+
PRODUCT_CATALYTIC_RATE_CONSTANT = "SBO_0000320"
|
|
2192
|
+
|
|
2193
|
+
# substrate catalytic rate constant
|
|
2194
|
+
SBO_0000321 = "SBO_0000321"
|
|
2195
|
+
SUBSTRATE_CATALYTIC_RATE_CONSTANT = "SBO_0000321"
|
|
2196
|
+
|
|
2197
|
+
# Michaelis constant for substrate
|
|
2198
|
+
SBO_0000322 = "SBO_0000322"
|
|
2199
|
+
MICHAELIS_CONSTANT_FOR_SUBSTRATE = "SBO_0000322"
|
|
2200
|
+
|
|
2201
|
+
# Michaelis constant for product
|
|
2202
|
+
SBO_0000323 = "SBO_0000323"
|
|
2203
|
+
MICHAELIS_CONSTANT_FOR_PRODUCT = "SBO_0000323"
|
|
2204
|
+
|
|
2205
|
+
# forward maximal velocity
|
|
2206
|
+
SBO_0000324 = "SBO_0000324"
|
|
2207
|
+
FORWARD_MAXIMAL_VELOCITY = "SBO_0000324"
|
|
2208
|
+
|
|
2209
|
+
# reverse maximal velocity
|
|
2210
|
+
SBO_0000325 = "SBO_0000325"
|
|
2211
|
+
REVERSE_MAXIMAL_VELOCITY = "SBO_0000325"
|
|
2212
|
+
|
|
2213
|
+
# enzymatic rate law for non-modulated unireactant enzymes
|
|
2214
|
+
SBO_0000326 = "SBO_0000326"
|
|
2215
|
+
ENZYMATIC_RATE_LAW_FOR_NON_MODULATED_UNIREACTANT_ENZYMES = "SBO_0000326"
|
|
2216
|
+
|
|
2217
|
+
# non-macromolecular ion
|
|
2218
|
+
SBO_0000327 = "SBO_0000327"
|
|
2219
|
+
NON_MACROMOLECULAR_ION = "SBO_0000327"
|
|
2220
|
+
|
|
2221
|
+
# non-macromolecular radical
|
|
2222
|
+
SBO_0000328 = "SBO_0000328"
|
|
2223
|
+
NON_MACROMOLECULAR_RADICAL = "SBO_0000328"
|
|
2224
|
+
|
|
2225
|
+
# transcription start site
|
|
2226
|
+
SBO_0000329 = "SBO_0000329"
|
|
2227
|
+
TRANSCRIPTION_START_SITE = "SBO_0000329"
|
|
2228
|
+
|
|
2229
|
+
# dephosphorylation
|
|
2230
|
+
SBO_0000330 = "SBO_0000330"
|
|
2231
|
+
DEPHOSPHORYLATION = "SBO_0000330"
|
|
2232
|
+
|
|
2233
|
+
# half-life
|
|
2234
|
+
SBO_0000331 = "SBO_0000331"
|
|
2235
|
+
HALF_LIFE = "SBO_0000331"
|
|
2236
|
+
|
|
2237
|
+
# half-life of an exponential decay
|
|
2238
|
+
SBO_0000332 = "SBO_0000332"
|
|
2239
|
+
HALF_LIFE_OF_AN_EXPONENTIAL_DECAY = "SBO_0000332"
|
|
2240
|
+
|
|
2241
|
+
# monoexponential decay rate law
|
|
2242
|
+
SBO_0000333 = "SBO_0000333"
|
|
2243
|
+
MONOEXPONENTIAL_DECAY_RATE_LAW = "SBO_0000333"
|
|
2244
|
+
|
|
2245
|
+
# non-coding RNA
|
|
2246
|
+
SBO_0000334 = "SBO_0000334"
|
|
2247
|
+
NON_CODING_RNA = "SBO_0000334"
|
|
2248
|
+
|
|
2249
|
+
# gene coding region
|
|
2250
|
+
SBO_0000335 = "SBO_0000335"
|
|
2251
|
+
GENE_CODING_REGION = "SBO_0000335"
|
|
2252
|
+
|
|
2253
|
+
# interactor
|
|
2254
|
+
SBO_0000336 = "SBO_0000336"
|
|
2255
|
+
INTERACTOR = "SBO_0000336"
|
|
2256
|
+
|
|
2257
|
+
# association constant
|
|
2258
|
+
SBO_0000337 = "SBO_0000337"
|
|
2259
|
+
ASSOCIATION_CONSTANT = "SBO_0000337"
|
|
2260
|
+
|
|
2261
|
+
# dissociation rate constant
|
|
2262
|
+
SBO_0000338 = "SBO_0000338"
|
|
2263
|
+
DISSOCIATION_RATE_CONSTANT = "SBO_0000338"
|
|
2264
|
+
|
|
2265
|
+
# bimolecular association rate constant
|
|
2266
|
+
SBO_0000339 = "SBO_0000339"
|
|
2267
|
+
BIMOLECULAR_ASSOCIATION_RATE_CONSTANT = "SBO_0000339"
|
|
2268
|
+
|
|
2269
|
+
# trimolecular association rate constant
|
|
2270
|
+
SBO_0000340 = "SBO_0000340"
|
|
2271
|
+
TRIMOLECULAR_ASSOCIATION_RATE_CONSTANT = "SBO_0000340"
|
|
2272
|
+
|
|
2273
|
+
# association rate constant
|
|
2274
|
+
SBO_0000341 = "SBO_0000341"
|
|
2275
|
+
ASSOCIATION_RATE_CONSTANT = "SBO_0000341"
|
|
2276
|
+
|
|
2277
|
+
# molecular or genetic interaction
|
|
2278
|
+
SBO_0000342 = "SBO_0000342"
|
|
2279
|
+
MOLECULAR_OR_GENETIC_INTERACTION = "SBO_0000342"
|
|
2280
|
+
|
|
2281
|
+
# genetic interaction
|
|
2282
|
+
SBO_0000343 = "SBO_0000343"
|
|
2283
|
+
GENETIC_INTERACTION = "SBO_0000343"
|
|
2284
|
+
|
|
2285
|
+
# molecular interaction
|
|
2286
|
+
SBO_0000344 = "SBO_0000344"
|
|
2287
|
+
MOLECULAR_INTERACTION = "SBO_0000344"
|
|
2288
|
+
|
|
2289
|
+
# time
|
|
2290
|
+
SBO_0000345 = "SBO_0000345"
|
|
2291
|
+
TIME = "SBO_0000345"
|
|
2292
|
+
|
|
2293
|
+
# temporal measure
|
|
2294
|
+
SBO_0000346 = "SBO_0000346"
|
|
2295
|
+
TEMPORAL_MEASURE = "SBO_0000346"
|
|
2296
|
+
|
|
2297
|
+
# duration
|
|
2298
|
+
SBO_0000347 = "SBO_0000347"
|
|
2299
|
+
DURATION = "SBO_0000347"
|
|
2300
|
+
|
|
2301
|
+
# exponential time constant
|
|
2302
|
+
SBO_0000348 = "SBO_0000348"
|
|
2303
|
+
EXPONENTIAL_TIME_CONSTANT = "SBO_0000348"
|
|
2304
|
+
|
|
2305
|
+
# inactivation rate constant
|
|
2306
|
+
SBO_0000349 = "SBO_0000349"
|
|
2307
|
+
INACTIVATION_RATE_CONSTANT = "SBO_0000349"
|
|
2308
|
+
|
|
2309
|
+
# forward reaction velocity
|
|
2310
|
+
SBO_0000350 = "SBO_0000350"
|
|
2311
|
+
FORWARD_REACTION_VELOCITY = "SBO_0000350"
|
|
2312
|
+
|
|
2313
|
+
# reverse zeroth order rate constant
|
|
2314
|
+
SBO_0000352 = "SBO_0000352"
|
|
2315
|
+
REVERSE_ZEROTH_ORDER_RATE_CONSTANT = "SBO_0000352"
|
|
2316
|
+
|
|
2317
|
+
# reverse reaction velocity
|
|
2318
|
+
SBO_0000353 = "SBO_0000353"
|
|
2319
|
+
REVERSE_REACTION_VELOCITY = "SBO_0000353"
|
|
2320
|
+
|
|
2321
|
+
# informational molecule segment
|
|
2322
|
+
SBO_0000354 = "SBO_0000354"
|
|
2323
|
+
INFORMATIONAL_MOLECULE_SEGMENT = "SBO_0000354"
|
|
2324
|
+
|
|
2325
|
+
# conservation law
|
|
2326
|
+
SBO_0000355 = "SBO_0000355"
|
|
2327
|
+
CONSERVATION_LAW = "SBO_0000355"
|
|
2328
|
+
|
|
2329
|
+
# decay constant
|
|
2330
|
+
SBO_0000356 = "SBO_0000356"
|
|
2331
|
+
DECAY_CONSTANT = "SBO_0000356"
|
|
2332
|
+
|
|
2333
|
+
# biological effect of a perturbation
|
|
2334
|
+
SBO_0000357 = "SBO_0000357"
|
|
2335
|
+
BIOLOGICAL_EFFECT_OF_A_PERTURBATION = "SBO_0000357"
|
|
2336
|
+
|
|
2337
|
+
# phenotype
|
|
2338
|
+
SBO_0000358 = "SBO_0000358"
|
|
2339
|
+
PHENOTYPE = "SBO_0000358"
|
|
2340
|
+
|
|
2341
|
+
# mass conservation law
|
|
2342
|
+
SBO_0000359 = "SBO_0000359"
|
|
2343
|
+
MASS_CONSERVATION_LAW = "SBO_0000359"
|
|
2344
|
+
|
|
2345
|
+
# quantity of an entity pool
|
|
2346
|
+
SBO_0000360 = "SBO_0000360"
|
|
2347
|
+
QUANTITY_OF_AN_ENTITY_POOL = "SBO_0000360"
|
|
2348
|
+
|
|
2349
|
+
# amount of an entity pool
|
|
2350
|
+
SBO_0000361 = "SBO_0000361"
|
|
2351
|
+
AMOUNT_OF_AN_ENTITY_POOL = "SBO_0000361"
|
|
2352
|
+
|
|
2353
|
+
# concentration conservation law
|
|
2354
|
+
SBO_0000362 = "SBO_0000362"
|
|
2355
|
+
CONCENTRATION_CONSERVATION_LAW = "SBO_0000362"
|
|
2356
|
+
|
|
2357
|
+
# activation constant
|
|
2358
|
+
SBO_0000363 = "SBO_0000363"
|
|
2359
|
+
ACTIVATION_CONSTANT = "SBO_0000363"
|
|
2360
|
+
|
|
2361
|
+
# multimer cardinality
|
|
2362
|
+
SBO_0000364 = "SBO_0000364"
|
|
2363
|
+
MULTIMER_CARDINALITY = "SBO_0000364"
|
|
2364
|
+
|
|
2365
|
+
# forward non-integral order rate constant, continuous case
|
|
2366
|
+
SBO_0000365 = "SBO_0000365"
|
|
2367
|
+
FORWARD_NON_INTEGRAL_ORDER_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000365"
|
|
2368
|
+
|
|
2369
|
+
# forward non-integral order rate constant, discrete case
|
|
2370
|
+
SBO_0000366 = "SBO_0000366"
|
|
2371
|
+
FORWARD_NON_INTEGRAL_ORDER_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000366"
|
|
2372
|
+
|
|
2373
|
+
# reverse non-integral order rate constant, discrete case
|
|
2374
|
+
SBO_0000367 = "SBO_0000367"
|
|
2375
|
+
REVERSE_NON_INTEGRAL_ORDER_RATE_CONSTANT__DISCRETE_CASE = "SBO_0000367"
|
|
2376
|
+
|
|
2377
|
+
# reverse non-integral order rate constant, continuous case
|
|
2378
|
+
SBO_0000368 = "SBO_0000368"
|
|
2379
|
+
REVERSE_NON_INTEGRAL_ORDER_RATE_CONSTANT__CONTINUOUS_CASE = "SBO_0000368"
|
|
2380
|
+
|
|
2381
|
+
# gene regulatory region
|
|
2382
|
+
SBO_0000369 = "SBO_0000369"
|
|
2383
|
+
GENE_REGULATORY_REGION = "SBO_0000369"
|
|
2384
|
+
|
|
2385
|
+
# Michaelis constant in non-equilibrium situation
|
|
2386
|
+
SBO_0000370 = "SBO_0000370"
|
|
2387
|
+
MICHAELIS_CONSTANT_IN_NON_EQUILIBRIUM_SITUATION = "SBO_0000370"
|
|
2388
|
+
|
|
2389
|
+
# Michaelis constant in quasi-steady state situation
|
|
2390
|
+
SBO_0000371 = "SBO_0000371"
|
|
2391
|
+
MICHAELIS_CONSTANT_IN_QUASI_STEADY_STATE_SITUATION = "SBO_0000371"
|
|
2392
|
+
|
|
2393
|
+
# Michaelis constant in irreversible situation
|
|
2394
|
+
SBO_0000372 = "SBO_0000372"
|
|
2395
|
+
MICHAELIS_CONSTANT_IN_IRREVERSIBLE_SITUATION = "SBO_0000372"
|
|
2396
|
+
|
|
2397
|
+
# Michaelis constant in fast equilibrium situation
|
|
2398
|
+
SBO_0000373 = "SBO_0000373"
|
|
2399
|
+
MICHAELIS_CONSTANT_IN_FAST_EQUILIBRIUM_SITUATION = "SBO_0000373"
|
|
2400
|
+
|
|
2401
|
+
# relationship
|
|
2402
|
+
SBO_0000374 = "SBO_0000374"
|
|
2403
|
+
RELATIONSHIP = "SBO_0000374"
|
|
2404
|
+
|
|
2405
|
+
# process
|
|
2406
|
+
SBO_0000375 = "SBO_0000375"
|
|
2407
|
+
PROCESS = "SBO_0000375"
|
|
2408
|
+
|
|
2409
|
+
# hydrolysis
|
|
2410
|
+
SBO_0000376 = "SBO_0000376"
|
|
2411
|
+
HYDROLYSIS = "SBO_0000376"
|
|
2412
|
+
|
|
2413
|
+
# isomerisation
|
|
2414
|
+
SBO_0000377 = "SBO_0000377"
|
|
2415
|
+
ISOMERISATION = "SBO_0000377"
|
|
2416
|
+
|
|
2417
|
+
# enzymatic rate law for inhibition of irreversible unireactant enzymes by competing substrates
|
|
2418
|
+
SBO_0000378 = "SBO_0000378"
|
|
2419
|
+
ENZYMATIC_RATE_LAW_FOR_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_COMPETING_SUBSTRATES = (
|
|
2420
|
+
"SBO_0000378"
|
|
2421
|
+
)
|
|
2422
|
+
|
|
2423
|
+
# enzymatic rate law for simple competitive inhibition of irreversible unireactant enzymes by two non-exclusive inhibitors
|
|
2424
|
+
SBO_0000379 = "SBO_0000379"
|
|
2425
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_TWO_NON_EXCLUSIVE_INHIBITORS = (
|
|
2426
|
+
"SBO_0000379"
|
|
2427
|
+
)
|
|
2428
|
+
|
|
2429
|
+
# biochemical coefficient
|
|
2430
|
+
SBO_0000380 = "SBO_0000380"
|
|
2431
|
+
BIOCHEMICAL_COEFFICIENT = "SBO_0000380"
|
|
2432
|
+
|
|
2433
|
+
# biochemical proportionality coefficient
|
|
2434
|
+
SBO_0000381 = "SBO_0000381"
|
|
2435
|
+
BIOCHEMICAL_PROPORTIONALITY_COEFFICIENT = "SBO_0000381"
|
|
2436
|
+
|
|
2437
|
+
# biochemical exponential coefficient
|
|
2438
|
+
SBO_0000382 = "SBO_0000382"
|
|
2439
|
+
BIOCHEMICAL_EXPONENTIAL_COEFFICIENT = "SBO_0000382"
|
|
2440
|
+
|
|
2441
|
+
# biochemical cooperative inhibition coefficient
|
|
2442
|
+
SBO_0000383 = "SBO_0000383"
|
|
2443
|
+
BIOCHEMICAL_COOPERATIVE_INHIBITION_COEFFICIENT = "SBO_0000383"
|
|
2444
|
+
|
|
2445
|
+
# biochemical inhibitory proportionality coefficient
|
|
2446
|
+
SBO_0000384 = "SBO_0000384"
|
|
2447
|
+
BIOCHEMICAL_INHIBITORY_PROPORTIONALITY_COEFFICIENT = "SBO_0000384"
|
|
2448
|
+
|
|
2449
|
+
# biochemical cooperative inhibitor substrate coefficient
|
|
2450
|
+
SBO_0000385 = "SBO_0000385"
|
|
2451
|
+
BIOCHEMICAL_COOPERATIVE_INHIBITOR_SUBSTRATE_COEFFICIENT = "SBO_0000385"
|
|
2452
|
+
|
|
2453
|
+
# enzymatic rate law for inhibition of irreversible unireactant enzymes by single competing substrate
|
|
2454
|
+
SBO_0000386 = "SBO_0000386"
|
|
2455
|
+
ENZYMATIC_RATE_LAW_FOR_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_SINGLE_COMPETING_SUBSTRATE = (
|
|
2456
|
+
"SBO_0000386"
|
|
2457
|
+
)
|
|
2458
|
+
|
|
2459
|
+
# enzymatic rate law for competitive inhibition of irreversible unireactant enzyme by product
|
|
2460
|
+
SBO_0000387 = "SBO_0000387"
|
|
2461
|
+
ENZYMATIC_RATE_LAW_FOR_COMPETITIVE_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYME_BY_PRODUCT = (
|
|
2462
|
+
"SBO_0000387"
|
|
2463
|
+
)
|
|
2464
|
+
|
|
2465
|
+
# enzymatic rate law for inhibition of irreversible unireactant enzymes by single competing substrate with product inhibition
|
|
2466
|
+
SBO_0000388 = "SBO_0000388"
|
|
2467
|
+
ENZYMATIC_RATE_LAW_FOR_INHIBITION_OF_IRREVERSIBLE_UNIREACTANT_ENZYMES_BY_SINGLE_COMPETING_SUBSTRATE_WITH_PRODUCT_INHIBITION = (
|
|
2468
|
+
"SBO_0000388"
|
|
2469
|
+
)
|
|
2470
|
+
|
|
2471
|
+
# switch value
|
|
2472
|
+
SBO_0000389 = "SBO_0000389"
|
|
2473
|
+
SWITCH_VALUE = "SBO_0000389"
|
|
2474
|
+
|
|
2475
|
+
# boolean switch
|
|
2476
|
+
SBO_0000390 = "SBO_0000390"
|
|
2477
|
+
BOOLEAN_SWITCH = "SBO_0000390"
|
|
2478
|
+
|
|
2479
|
+
# steady state expression
|
|
2480
|
+
SBO_0000391 = "SBO_0000391"
|
|
2481
|
+
STEADY_STATE_EXPRESSION = "SBO_0000391"
|
|
2482
|
+
|
|
2483
|
+
# equivalence
|
|
2484
|
+
SBO_0000392 = "SBO_0000392"
|
|
2485
|
+
EQUIVALENCE = "SBO_0000392"
|
|
2486
|
+
|
|
2487
|
+
# production
|
|
2488
|
+
SBO_0000393 = "SBO_0000393"
|
|
2489
|
+
PRODUCTION = "SBO_0000393"
|
|
2490
|
+
|
|
2491
|
+
# consumption
|
|
2492
|
+
SBO_0000394 = "SBO_0000394"
|
|
2493
|
+
CONSUMPTION = "SBO_0000394"
|
|
2494
|
+
|
|
2495
|
+
# encapsulating process
|
|
2496
|
+
SBO_0000395 = "SBO_0000395"
|
|
2497
|
+
ENCAPSULATING_PROCESS = "SBO_0000395"
|
|
2498
|
+
|
|
2499
|
+
# uncertain process
|
|
2500
|
+
SBO_0000396 = "SBO_0000396"
|
|
2501
|
+
UNCERTAIN_PROCESS = "SBO_0000396"
|
|
2502
|
+
|
|
2503
|
+
# omitted process
|
|
2504
|
+
SBO_0000397 = "SBO_0000397"
|
|
2505
|
+
OMITTED_PROCESS = "SBO_0000397"
|
|
2506
|
+
|
|
2507
|
+
# logical relationship
|
|
2508
|
+
SBO_0000398 = "SBO_0000398"
|
|
2509
|
+
LOGICAL_RELATIONSHIP = "SBO_0000398"
|
|
2510
|
+
|
|
2511
|
+
# decarboxylation
|
|
2512
|
+
SBO_0000399 = "SBO_0000399"
|
|
2513
|
+
DECARBOXYLATION = "SBO_0000399"
|
|
2514
|
+
|
|
2515
|
+
# decarbonylation
|
|
2516
|
+
SBO_0000400 = "SBO_0000400"
|
|
2517
|
+
DECARBONYLATION = "SBO_0000400"
|
|
2518
|
+
|
|
2519
|
+
# deamination
|
|
2520
|
+
SBO_0000401 = "SBO_0000401"
|
|
2521
|
+
DEAMINATION = "SBO_0000401"
|
|
2522
|
+
|
|
2523
|
+
# transfer of a chemical group
|
|
2524
|
+
SBO_0000402 = "SBO_0000402"
|
|
2525
|
+
TRANSFER_OF_A_CHEMICAL_GROUP = "SBO_0000402"
|
|
2526
|
+
|
|
2527
|
+
# transamination
|
|
2528
|
+
SBO_0000403 = "SBO_0000403"
|
|
2529
|
+
TRANSAMINATION = "SBO_0000403"
|
|
2530
|
+
|
|
2531
|
+
# unit of genetic information
|
|
2532
|
+
SBO_0000404 = "SBO_0000404"
|
|
2533
|
+
UNIT_OF_GENETIC_INFORMATION = "SBO_0000404"
|
|
2534
|
+
|
|
2535
|
+
# perturbing agent
|
|
2536
|
+
SBO_0000405 = "SBO_0000405"
|
|
2537
|
+
PERTURBING_AGENT = "SBO_0000405"
|
|
2538
|
+
|
|
2539
|
+
# observable
|
|
2540
|
+
SBO_0000406 = "SBO_0000406"
|
|
2541
|
+
OBSERVABLE = "SBO_0000406"
|
|
2542
|
+
|
|
2543
|
+
# absolute inhibition
|
|
2544
|
+
SBO_0000407 = "SBO_0000407"
|
|
2545
|
+
ABSOLUTE_INHIBITION = "SBO_0000407"
|
|
2546
|
+
|
|
2547
|
+
# biological activity
|
|
2548
|
+
SBO_0000408 = "SBO_0000408"
|
|
2549
|
+
BIOLOGICAL_ACTIVITY = "SBO_0000408"
|
|
2550
|
+
|
|
2551
|
+
# interaction outcome
|
|
2552
|
+
SBO_0000409 = "SBO_0000409"
|
|
2553
|
+
INTERACTION_OUTCOME = "SBO_0000409"
|
|
2554
|
+
|
|
2555
|
+
# implicit compartment
|
|
2556
|
+
SBO_0000410 = "SBO_0000410"
|
|
2557
|
+
IMPLICIT_COMPARTMENT = "SBO_0000410"
|
|
2558
|
+
|
|
2559
|
+
# absolute stimulation
|
|
2560
|
+
SBO_0000411 = "SBO_0000411"
|
|
2561
|
+
ABSOLUTE_STIMULATION = "SBO_0000411"
|
|
2562
|
+
|
|
2563
|
+
# positional relationship
|
|
2564
|
+
SBO_0000413 = "SBO_0000413"
|
|
2565
|
+
POSITIONAL_RELATIONSHIP = "SBO_0000413"
|
|
2566
|
+
|
|
2567
|
+
# cis
|
|
2568
|
+
SBO_0000414 = "SBO_0000414"
|
|
2569
|
+
CIS = "SBO_0000414"
|
|
2570
|
+
|
|
2571
|
+
# trans
|
|
2572
|
+
SBO_0000415 = "SBO_0000415"
|
|
2573
|
+
TRANS = "SBO_0000415"
|
|
2574
|
+
|
|
2575
|
+
# true
|
|
2576
|
+
SBO_0000416 = "SBO_0000416"
|
|
2577
|
+
TRUE = "SBO_0000416"
|
|
2578
|
+
|
|
2579
|
+
# false
|
|
2580
|
+
SBO_0000417 = "SBO_0000417"
|
|
2581
|
+
FALSE = "SBO_0000417"
|
|
2582
|
+
|
|
2583
|
+
# multimer of complexes
|
|
2584
|
+
SBO_0000418 = "SBO_0000418"
|
|
2585
|
+
MULTIMER_OF_COMPLEXES = "SBO_0000418"
|
|
2586
|
+
|
|
2587
|
+
# multimer of informational molecule segment
|
|
2588
|
+
SBO_0000419 = "SBO_0000419"
|
|
2589
|
+
MULTIMER_OF_INFORMATIONAL_MOLECULE_SEGMENT = "SBO_0000419"
|
|
2590
|
+
|
|
2591
|
+
# multimer of macromolecules
|
|
2592
|
+
SBO_0000420 = "SBO_0000420"
|
|
2593
|
+
MULTIMER_OF_MACROMOLECULES = "SBO_0000420"
|
|
2594
|
+
|
|
2595
|
+
# multimer of simple chemicals
|
|
2596
|
+
SBO_0000421 = "SBO_0000421"
|
|
2597
|
+
MULTIMER_OF_SIMPLE_CHEMICALS = "SBO_0000421"
|
|
2598
|
+
|
|
2599
|
+
# isoinhibition constant
|
|
2600
|
+
SBO_0000422 = "SBO_0000422"
|
|
2601
|
+
ISOINHIBITION_CONSTANT = "SBO_0000422"
|
|
2602
|
+
|
|
2603
|
+
# pseudo-dissociation constant for product
|
|
2604
|
+
SBO_0000423 = "SBO_0000423"
|
|
2605
|
+
PSEUDO_DISSOCIATION_CONSTANT_FOR_PRODUCT = "SBO_0000423"
|
|
2606
|
+
|
|
2607
|
+
# pseudo-dissociation constant for substrate
|
|
2608
|
+
SBO_0000424 = "SBO_0000424"
|
|
2609
|
+
PSEUDO_DISSOCIATION_CONSTANT_FOR_SUBSTRATE = "SBO_0000424"
|
|
2610
|
+
|
|
2611
|
+
# reversible Hill-type enzymatic rate law
|
|
2612
|
+
SBO_0000425 = "SBO_0000425"
|
|
2613
|
+
REVERSIBLE_HILL_TYPE_ENZYMATIC_RATE_LAW = "SBO_0000425"
|
|
2614
|
+
|
|
2615
|
+
# modulated reversible Hill-type rate law
|
|
2616
|
+
SBO_0000426 = "SBO_0000426"
|
|
2617
|
+
MODULATED_REVERSIBLE_HILL_TYPE_RATE_LAW = "SBO_0000426"
|
|
2618
|
+
|
|
2619
|
+
# modulated reversible Hill-type rate law with one modifier
|
|
2620
|
+
SBO_0000427 = "SBO_0000427"
|
|
2621
|
+
MODULATED_REVERSIBLE_HILL_TYPE_RATE_LAW_WITH_ONE_MODIFIER = "SBO_0000427"
|
|
2622
|
+
|
|
2623
|
+
# modulated reversible Hill-type rate law with two modifiers
|
|
2624
|
+
SBO_0000428 = "SBO_0000428"
|
|
2625
|
+
MODULATED_REVERSIBLE_HILL_TYPE_RATE_LAW_WITH_TWO_MODIFIERS = "SBO_0000428"
|
|
2626
|
+
|
|
2627
|
+
# enzymatic rate law for multireactant enzymes
|
|
2628
|
+
SBO_0000429 = "SBO_0000429"
|
|
2629
|
+
ENZYMATIC_RATE_LAW_FOR_MULTIREACTANT_ENZYMES = "SBO_0000429"
|
|
2630
|
+
|
|
2631
|
+
# enzymatic rate law for modulated unireactant enzymes
|
|
2632
|
+
SBO_0000430 = "SBO_0000430"
|
|
2633
|
+
ENZYMATIC_RATE_LAW_FOR_MODULATED_UNIREACTANT_ENZYMES = "SBO_0000430"
|
|
2634
|
+
|
|
2635
|
+
# unmodulated reversible Hill-type rate law
|
|
2636
|
+
SBO_0000431 = "SBO_0000431"
|
|
2637
|
+
UNMODULATED_REVERSIBLE_HILL_TYPE_RATE_LAW = "SBO_0000431"
|
|
2638
|
+
|
|
2639
|
+
# irreversible Michaelis Menten rate law for two substrates
|
|
2640
|
+
SBO_0000432 = "SBO_0000432"
|
|
2641
|
+
IRREVERSIBLE_MICHAELIS_MENTEN_RATE_LAW_FOR_TWO_SUBSTRATES = "SBO_0000432"
|
|
2642
|
+
|
|
2643
|
+
# Ordered Bi-Bi mechanism rate law
|
|
2644
|
+
SBO_0000433 = "SBO_0000433"
|
|
2645
|
+
ORDERED_BI_BI_MECHANISM_RATE_LAW = "SBO_0000433"
|
|
2646
|
+
|
|
2647
|
+
# Ordered Bi-Uni mechanism rate law
|
|
2648
|
+
SBO_0000434 = "SBO_0000434"
|
|
2649
|
+
ORDERED_BI_UNI_MECHANISM_RATE_LAW = "SBO_0000434"
|
|
2650
|
+
|
|
2651
|
+
# Ordered Uni-Bi mechanism rate law
|
|
2652
|
+
SBO_0000435 = "SBO_0000435"
|
|
2653
|
+
ORDERED_UNI_BI_MECHANISM_RATE_LAW = "SBO_0000435"
|
|
2654
|
+
|
|
2655
|
+
# Ping Pong Bi-Bi mechanism rate law
|
|
2656
|
+
SBO_0000436 = "SBO_0000436"
|
|
2657
|
+
PING_PONG_BI_BI_MECHANISM_RATE_LAW = "SBO_0000436"
|
|
2658
|
+
|
|
2659
|
+
# reversible Iso Uni-Uni
|
|
2660
|
+
SBO_0000437 = "SBO_0000437"
|
|
2661
|
+
REVERSIBLE_ISO_UNI_UNI = "SBO_0000437"
|
|
2662
|
+
|
|
2663
|
+
# reversible Uni-Uni
|
|
2664
|
+
SBO_0000438 = "SBO_0000438"
|
|
2665
|
+
REVERSIBLE_UNI_UNI = "SBO_0000438"
|
|
2666
|
+
|
|
2667
|
+
# Uni-Uni Reversible using Haldane relationship
|
|
2668
|
+
SBO_0000439 = "SBO_0000439"
|
|
2669
|
+
UNI_UNI_REVERSIBLE_USING_HALDANE_RELATIONSHIP = "SBO_0000439"
|
|
2670
|
+
|
|
2671
|
+
# enzymatic rate law for irreversible allosteric inhibition
|
|
2672
|
+
SBO_0000440 = "SBO_0000440"
|
|
2673
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_ALLOSTERIC_INHIBITION = "SBO_0000440"
|
|
2674
|
+
|
|
2675
|
+
# enzymatic rate law for mixed-type inhibition of reversible enzymes by mutually exclusive inhibitors
|
|
2676
|
+
SBO_0000441 = "SBO_0000441"
|
|
2677
|
+
ENZYMATIC_RATE_LAW_FOR_MIXED_TYPE_INHIBITION_OF_REVERSIBLE_ENZYMES_BY_MUTUALLY_EXCLUSIVE_INHIBITORS = (
|
|
2678
|
+
"SBO_0000441"
|
|
2679
|
+
)
|
|
2680
|
+
|
|
2681
|
+
# enzymatic rate law for simple reversible non-competitive inhibition of unireactant enzymes
|
|
2682
|
+
SBO_0000442 = "SBO_0000442"
|
|
2683
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_REVERSIBLE_NON_COMPETITIVE_INHIBITION_OF_UNIREACTANT_ENZYMES = (
|
|
2684
|
+
"SBO_0000442"
|
|
2685
|
+
)
|
|
2686
|
+
|
|
2687
|
+
# enzymatic rate law for reversible essential activation
|
|
2688
|
+
SBO_0000443 = "SBO_0000443"
|
|
2689
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_ESSENTIAL_ACTIVATION = "SBO_0000443"
|
|
2690
|
+
|
|
2691
|
+
# enzymatic rate law for reversible mixed activation
|
|
2692
|
+
SBO_0000444 = "SBO_0000444"
|
|
2693
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_MIXED_ACTIVATION = "SBO_0000444"
|
|
2694
|
+
|
|
2695
|
+
# enzymatic rate law for irreversible substrate activation
|
|
2696
|
+
SBO_0000445 = "SBO_0000445"
|
|
2697
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_SUBSTRATE_ACTIVATION = "SBO_0000445"
|
|
2698
|
+
|
|
2699
|
+
# enzymatic rate law for irrreversible mixed activation
|
|
2700
|
+
SBO_0000446 = "SBO_0000446"
|
|
2701
|
+
ENZYMATIC_RATE_LAW_FOR_IRRREVERSIBLE_MIXED_ACTIVATION = "SBO_0000446"
|
|
2702
|
+
|
|
2703
|
+
# enzymatic rate law for reversible catalytic activation with one activator
|
|
2704
|
+
SBO_0000447 = "SBO_0000447"
|
|
2705
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_CATALYTIC_ACTIVATION_WITH_ONE_ACTIVATOR = (
|
|
2706
|
+
"SBO_0000447"
|
|
2707
|
+
)
|
|
2708
|
+
|
|
2709
|
+
# enzymatic rate law for reversible specific activation
|
|
2710
|
+
SBO_0000448 = "SBO_0000448"
|
|
2711
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_SPECIFIC_ACTIVATION = "SBO_0000448"
|
|
2712
|
+
|
|
2713
|
+
# enzymatic rate law for irreversible catalytic activation with one activator
|
|
2714
|
+
SBO_0000449 = "SBO_0000449"
|
|
2715
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_CATALYTIC_ACTIVATION_WITH_ONE_ACTIVATOR = (
|
|
2716
|
+
"SBO_0000449"
|
|
2717
|
+
)
|
|
2718
|
+
|
|
2719
|
+
# enzymatic rate law for irreversible specific activation
|
|
2720
|
+
SBO_0000450 = "SBO_0000450"
|
|
2721
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_SPECIFIC_ACTIVATION = "SBO_0000450"
|
|
2722
|
+
|
|
2723
|
+
# enzymatic rate law for reversible reactions with competitive inhibition
|
|
2724
|
+
SBO_0000451 = "SBO_0000451"
|
|
2725
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_REACTIONS_WITH_COMPETITIVE_INHIBITION = (
|
|
2726
|
+
"SBO_0000451"
|
|
2727
|
+
)
|
|
2728
|
+
|
|
2729
|
+
# enzymatic rate law for reversible competitive inhibition by one inhibitor
|
|
2730
|
+
SBO_0000452 = "SBO_0000452"
|
|
2731
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_COMPETITIVE_INHIBITION_BY_ONE_INHIBITOR = (
|
|
2732
|
+
"SBO_0000452"
|
|
2733
|
+
)
|
|
2734
|
+
|
|
2735
|
+
# enzymatic rate law for reversible empirical allosteric inhibition by one inhibitor
|
|
2736
|
+
SBO_0000453 = "SBO_0000453"
|
|
2737
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_EMPIRICAL_ALLOSTERIC_INHIBITION_BY_ONE_INHIBITOR = (
|
|
2738
|
+
"SBO_0000453"
|
|
2739
|
+
)
|
|
2740
|
+
|
|
2741
|
+
# enzymatic rate law for reversible substrate inhibition
|
|
2742
|
+
SBO_0000454 = "SBO_0000454"
|
|
2743
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_SUBSTRATE_INHIBITION = "SBO_0000454"
|
|
2744
|
+
|
|
2745
|
+
# enzymatic rate law for irreversible substrate inhibition
|
|
2746
|
+
SBO_0000455 = "SBO_0000455"
|
|
2747
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_SUBSTRATE_INHIBITION = "SBO_0000455"
|
|
2748
|
+
|
|
2749
|
+
# enzymatic rate law for reversible unireactant enzyme with a single hyperbolic modulator
|
|
2750
|
+
SBO_0000456 = "SBO_0000456"
|
|
2751
|
+
ENZYMATIC_RATE_LAW_FOR_REVERSIBLE_UNIREACTANT_ENZYME_WITH_A_SINGLE_HYPERBOLIC_MODULATOR = (
|
|
2752
|
+
"SBO_0000456"
|
|
2753
|
+
)
|
|
2754
|
+
|
|
2755
|
+
# enzymatic rate law for irreversible unireactant enzyme with a single hyperbolic modulator
|
|
2756
|
+
SBO_0000457 = "SBO_0000457"
|
|
2757
|
+
ENZYMATIC_RATE_LAW_FOR_IRREVERSIBLE_UNIREACTANT_ENZYME_WITH_A_SINGLE_HYPERBOLIC_MODULATOR = (
|
|
2758
|
+
"SBO_0000457"
|
|
2759
|
+
)
|
|
2760
|
+
|
|
2761
|
+
# enzymatic rate law for simple uncompetitive inhibition of reversible unireactant enzymes
|
|
2762
|
+
SBO_0000458 = "SBO_0000458"
|
|
2763
|
+
ENZYMATIC_RATE_LAW_FOR_SIMPLE_UNCOMPETITIVE_INHIBITION_OF_REVERSIBLE_UNIREACTANT_ENZYMES = (
|
|
2764
|
+
"SBO_0000458"
|
|
2765
|
+
)
|
|
2766
|
+
|
|
2767
|
+
# stimulator
|
|
2768
|
+
SBO_0000459 = "SBO_0000459"
|
|
2769
|
+
STIMULATOR = "SBO_0000459"
|
|
2770
|
+
|
|
2771
|
+
# enzymatic catalyst
|
|
2772
|
+
SBO_0000460 = "SBO_0000460"
|
|
2773
|
+
ENZYMATIC_CATALYST = "SBO_0000460"
|
|
2774
|
+
|
|
2775
|
+
# essential activator
|
|
2776
|
+
SBO_0000461 = "SBO_0000461"
|
|
2777
|
+
ESSENTIAL_ACTIVATOR = "SBO_0000461"
|
|
2778
|
+
|
|
2779
|
+
# non-essential activator
|
|
2780
|
+
SBO_0000462 = "SBO_0000462"
|
|
2781
|
+
NON_ESSENTIAL_ACTIVATOR = "SBO_0000462"
|
|
2782
|
+
|
|
2783
|
+
# standard biochemical potential
|
|
2784
|
+
SBO_0000463 = "SBO_0000463"
|
|
2785
|
+
STANDARD_BIOCHEMICAL_POTENTIAL = "SBO_0000463"
|
|
2786
|
+
|
|
2787
|
+
# state variable assignment
|
|
2788
|
+
SBO_0000464 = "SBO_0000464"
|
|
2789
|
+
STATE_VARIABLE_ASSIGNMENT = "SBO_0000464"
|
|
2790
|
+
|
|
2791
|
+
# spatial measure
|
|
2792
|
+
SBO_0000465 = "SBO_0000465"
|
|
2793
|
+
SPATIAL_MEASURE = "SBO_0000465"
|
|
2794
|
+
|
|
2795
|
+
# length
|
|
2796
|
+
SBO_0000466 = "SBO_0000466"
|
|
2797
|
+
LENGTH = "SBO_0000466"
|
|
2798
|
+
|
|
2799
|
+
# area
|
|
2800
|
+
SBO_0000467 = "SBO_0000467"
|
|
2801
|
+
AREA = "SBO_0000467"
|
|
2802
|
+
|
|
2803
|
+
# volume
|
|
2804
|
+
SBO_0000468 = "SBO_0000468"
|
|
2805
|
+
VOLUME = "SBO_0000468"
|
|
2806
|
+
|
|
2807
|
+
# containment
|
|
2808
|
+
SBO_0000469 = "SBO_0000469"
|
|
2809
|
+
CONTAINMENT = "SBO_0000469"
|
|
2810
|
+
|
|
2811
|
+
# mass fraction
|
|
2812
|
+
SBO_0000470 = "SBO_0000470"
|
|
2813
|
+
MASS_FRACTION = "SBO_0000470"
|
|
2814
|
+
|
|
2815
|
+
# molal concentration of an entity
|
|
2816
|
+
SBO_0000471 = "SBO_0000471"
|
|
2817
|
+
MOLAL_CONCENTRATION_OF_AN_ENTITY = "SBO_0000471"
|
|
2818
|
+
|
|
2819
|
+
# molar concentration of an entity
|
|
2820
|
+
SBO_0000472 = "SBO_0000472"
|
|
2821
|
+
MOLAR_CONCENTRATION_OF_AN_ENTITY = "SBO_0000472"
|
|
2822
|
+
|
|
2823
|
+
# denotement
|
|
2824
|
+
SBO_0000473 = "SBO_0000473"
|
|
2825
|
+
DENOTEMENT = "SBO_0000473"
|
|
2826
|
+
|
|
2827
|
+
# convenience function
|
|
2828
|
+
SBO_0000474 = "SBO_0000474"
|
|
2829
|
+
CONVENIENCE_FUNCTION = "SBO_0000474"
|
|
2830
|
+
|
|
2831
|
+
# periodic forcing function
|
|
2832
|
+
SBO_0000475 = "SBO_0000475"
|
|
2833
|
+
PERIODIC_FORCING_FUNCTION = "SBO_0000475"
|
|
2834
|
+
|
|
2835
|
+
# period
|
|
2836
|
+
SBO_0000476 = "SBO_0000476"
|
|
2837
|
+
PERIOD = "SBO_0000476"
|
|
2838
|
+
|
|
2839
|
+
# phase shift
|
|
2840
|
+
SBO_0000477 = "SBO_0000477"
|
|
2841
|
+
PHASE_SHIFT = "SBO_0000477"
|
|
2842
|
+
|
|
2843
|
+
# powered product of Michaelis constant
|
|
2844
|
+
SBO_0000478 = "SBO_0000478"
|
|
2845
|
+
POWERED_PRODUCT_OF_MICHAELIS_CONSTANT = "SBO_0000478"
|
|
2846
|
+
|
|
2847
|
+
# powered product of substrate Michaelis constants
|
|
2848
|
+
SBO_0000479 = "SBO_0000479"
|
|
2849
|
+
POWERED_PRODUCT_OF_SUBSTRATE_MICHAELIS_CONSTANTS = "SBO_0000479"
|
|
2850
|
+
|
|
2851
|
+
# powered product of product Michaelis constants
|
|
2852
|
+
SBO_0000480 = "SBO_0000480"
|
|
2853
|
+
POWERED_PRODUCT_OF_PRODUCT_MICHAELIS_CONSTANTS = "SBO_0000480"
|
|
2854
|
+
|
|
2855
|
+
# stoichiometric coefficient
|
|
2856
|
+
SBO_0000481 = "SBO_0000481"
|
|
2857
|
+
STOICHIOMETRIC_COEFFICIENT = "SBO_0000481"
|
|
2858
|
+
|
|
2859
|
+
# geometric mean rate constant
|
|
2860
|
+
SBO_0000482 = "SBO_0000482"
|
|
2861
|
+
GEOMETRIC_MEAN_RATE_CONSTANT = "SBO_0000482"
|
|
2862
|
+
|
|
2863
|
+
# forward geometric mean rate constant
|
|
2864
|
+
SBO_0000483 = "SBO_0000483"
|
|
2865
|
+
FORWARD_GEOMETRIC_MEAN_RATE_CONSTANT = "SBO_0000483"
|
|
2866
|
+
|
|
2867
|
+
# reverse geometric mean rate constant
|
|
2868
|
+
SBO_0000484 = "SBO_0000484"
|
|
2869
|
+
REVERSE_GEOMETRIC_MEAN_RATE_CONSTANT = "SBO_0000484"
|
|
2870
|
+
|
|
2871
|
+
# basal rate constant
|
|
2872
|
+
SBO_0000485 = "SBO_0000485"
|
|
2873
|
+
BASAL_RATE_CONSTANT = "SBO_0000485"
|
|
2874
|
+
|
|
2875
|
+
# relative basal rate constant
|
|
2876
|
+
SBO_0000486 = "SBO_0000486"
|
|
2877
|
+
RELATIVE_BASAL_RATE_CONSTANT = "SBO_0000486"
|
|
2878
|
+
|
|
2879
|
+
# relative activity function
|
|
2880
|
+
SBO_0000487 = "SBO_0000487"
|
|
2881
|
+
RELATIVE_ACTIVITY_FUNCTION = "SBO_0000487"
|
|
2882
|
+
|
|
2883
|
+
# relative activation function
|
|
2884
|
+
SBO_0000488 = "SBO_0000488"
|
|
2885
|
+
RELATIVE_ACTIVATION_FUNCTION = "SBO_0000488"
|
|
2886
|
+
|
|
2887
|
+
# relative inhibition function
|
|
2888
|
+
SBO_0000489 = "SBO_0000489"
|
|
2889
|
+
RELATIVE_INHIBITION_FUNCTION = "SBO_0000489"
|
|
2890
|
+
|
|
2891
|
+
# number of products
|
|
2892
|
+
SBO_0000490 = "SBO_0000490"
|
|
2893
|
+
NUMBER_OF_PRODUCTS = "SBO_0000490"
|
|
2894
|
+
|
|
2895
|
+
# diffusion coefficient
|
|
2896
|
+
SBO_0000491 = "SBO_0000491"
|
|
2897
|
+
DIFFUSION_COEFFICIENT = "SBO_0000491"
|
|
2898
|
+
|
|
2899
|
+
# amplitude
|
|
2900
|
+
SBO_0000492 = "SBO_0000492"
|
|
2901
|
+
AMPLITUDE = "SBO_0000492"
|
|
2902
|
+
|
|
2903
|
+
# functional domain
|
|
2904
|
+
SBO_0000493 = "SBO_0000493"
|
|
2905
|
+
FUNCTIONAL_DOMAIN = "SBO_0000493"
|
|
2906
|
+
|
|
2907
|
+
# binding site
|
|
2908
|
+
SBO_0000494 = "SBO_0000494"
|
|
2909
|
+
BINDING_SITE = "SBO_0000494"
|
|
2910
|
+
|
|
2911
|
+
# catalytic site
|
|
2912
|
+
SBO_0000495 = "SBO_0000495"
|
|
2913
|
+
CATALYTIC_SITE = "SBO_0000495"
|
|
2914
|
+
|
|
2915
|
+
# transmembrane domain
|
|
2916
|
+
SBO_0000496 = "SBO_0000496"
|
|
2917
|
+
TRANSMEMBRANE_DOMAIN = "SBO_0000496"
|
|
2918
|
+
|
|
2919
|
+
# ternary switch
|
|
2920
|
+
SBO_0000497 = "SBO_0000497"
|
|
2921
|
+
TERNARY_SWITCH = "SBO_0000497"
|
|
2922
|
+
|
|
2923
|
+
# relative activity
|
|
2924
|
+
SBO_0000498 = "SBO_0000498"
|
|
2925
|
+
RELATIVE_ACTIVITY = "SBO_0000498"
|
|
2926
|
+
|
|
2927
|
+
# genetic suppression
|
|
2928
|
+
SBO_0000500 = "SBO_0000500"
|
|
2929
|
+
GENETIC_SUPPRESSION = "SBO_0000500"
|
|
2930
|
+
|
|
2931
|
+
# genetic enhancement
|
|
2932
|
+
SBO_0000501 = "SBO_0000501"
|
|
2933
|
+
GENETIC_ENHANCEMENT = "SBO_0000501"
|
|
2934
|
+
|
|
2935
|
+
# synthetic lethality
|
|
2936
|
+
SBO_0000502 = "SBO_0000502"
|
|
2937
|
+
SYNTHETIC_LETHALITY = "SBO_0000502"
|
|
2938
|
+
|
|
2939
|
+
# number of entity pool constituents
|
|
2940
|
+
SBO_0000503 = "SBO_0000503"
|
|
2941
|
+
NUMBER_OF_ENTITY_POOL_CONSTITUENTS = "SBO_0000503"
|
|
2942
|
+
|
|
2943
|
+
# mass of an entity pool
|
|
2944
|
+
SBO_0000504 = "SBO_0000504"
|
|
2945
|
+
MASS_OF_AN_ENTITY_POOL = "SBO_0000504"
|
|
2946
|
+
|
|
2947
|
+
# concentration of enzyme
|
|
2948
|
+
SBO_0000505 = "SBO_0000505"
|
|
2949
|
+
CONCENTRATION_OF_ENZYME = "SBO_0000505"
|
|
2950
|
+
|
|
2951
|
+
# mass of enzyme
|
|
2952
|
+
SBO_0000506 = "SBO_0000506"
|
|
2953
|
+
MASS_OF_ENZYME = "SBO_0000506"
|
|
2954
|
+
|
|
2955
|
+
# number of an enzyme
|
|
2956
|
+
SBO_0000507 = "SBO_0000507"
|
|
2957
|
+
NUMBER_OF_AN_ENZYME = "SBO_0000507"
|
|
2958
|
+
|
|
2959
|
+
# number of a reactant
|
|
2960
|
+
SBO_0000508 = "SBO_0000508"
|
|
2961
|
+
NUMBER_OF_A_REACTANT = "SBO_0000508"
|
|
2962
|
+
|
|
2963
|
+
# concentration of reactant
|
|
2964
|
+
SBO_0000509 = "SBO_0000509"
|
|
2965
|
+
CONCENTRATION_OF_REACTANT = "SBO_0000509"
|
|
2966
|
+
|
|
2967
|
+
# mass of reactant
|
|
2968
|
+
SBO_0000510 = "SBO_0000510"
|
|
2969
|
+
MASS_OF_REACTANT = "SBO_0000510"
|
|
2970
|
+
|
|
2971
|
+
# number of a product
|
|
2972
|
+
SBO_0000511 = "SBO_0000511"
|
|
2973
|
+
NUMBER_OF_A_PRODUCT = "SBO_0000511"
|
|
2974
|
+
|
|
2975
|
+
# concentration of product
|
|
2976
|
+
SBO_0000512 = "SBO_0000512"
|
|
2977
|
+
CONCENTRATION_OF_PRODUCT = "SBO_0000512"
|
|
2978
|
+
|
|
2979
|
+
# mass of product
|
|
2980
|
+
SBO_0000513 = "SBO_0000513"
|
|
2981
|
+
MASS_OF_PRODUCT = "SBO_0000513"
|
|
2982
|
+
|
|
2983
|
+
# number of a substrate
|
|
2984
|
+
SBO_0000514 = "SBO_0000514"
|
|
2985
|
+
NUMBER_OF_A_SUBSTRATE = "SBO_0000514"
|
|
2986
|
+
|
|
2987
|
+
# concentration of substrate
|
|
2988
|
+
SBO_0000515 = "SBO_0000515"
|
|
2989
|
+
CONCENTRATION_OF_SUBSTRATE = "SBO_0000515"
|
|
2990
|
+
|
|
2991
|
+
# mass of substrate
|
|
2992
|
+
SBO_0000516 = "SBO_0000516"
|
|
2993
|
+
MASS_OF_SUBSTRATE = "SBO_0000516"
|
|
2994
|
+
|
|
2995
|
+
# number of a modifier
|
|
2996
|
+
SBO_0000517 = "SBO_0000517"
|
|
2997
|
+
NUMBER_OF_A_MODIFIER = "SBO_0000517"
|
|
2998
|
+
|
|
2999
|
+
# concentration of modifier
|
|
3000
|
+
SBO_0000518 = "SBO_0000518"
|
|
3001
|
+
CONCENTRATION_OF_MODIFIER = "SBO_0000518"
|
|
3002
|
+
|
|
3003
|
+
# mass of modifier
|
|
3004
|
+
SBO_0000519 = "SBO_0000519"
|
|
3005
|
+
MASS_OF_MODIFIER = "SBO_0000519"
|
|
3006
|
+
|
|
3007
|
+
# number of an inhibitor
|
|
3008
|
+
SBO_0000520 = "SBO_0000520"
|
|
3009
|
+
NUMBER_OF_AN_INHIBITOR = "SBO_0000520"
|
|
3010
|
+
|
|
3011
|
+
# concentration of inhibitor
|
|
3012
|
+
SBO_0000521 = "SBO_0000521"
|
|
3013
|
+
CONCENTRATION_OF_INHIBITOR = "SBO_0000521"
|
|
3014
|
+
|
|
3015
|
+
# mass of inhibitor
|
|
3016
|
+
SBO_0000522 = "SBO_0000522"
|
|
3017
|
+
MASS_OF_INHIBITOR = "SBO_0000522"
|
|
3018
|
+
|
|
3019
|
+
# number of an activator
|
|
3020
|
+
SBO_0000523 = "SBO_0000523"
|
|
3021
|
+
NUMBER_OF_AN_ACTIVATOR = "SBO_0000523"
|
|
3022
|
+
|
|
3023
|
+
# concentration of activator
|
|
3024
|
+
SBO_0000524 = "SBO_0000524"
|
|
3025
|
+
CONCENTRATION_OF_ACTIVATOR = "SBO_0000524"
|
|
3026
|
+
|
|
3027
|
+
# mass of activator
|
|
3028
|
+
SBO_0000525 = "SBO_0000525"
|
|
3029
|
+
MASS_OF_ACTIVATOR = "SBO_0000525"
|
|
3030
|
+
|
|
3031
|
+
# protein complex formation
|
|
3032
|
+
SBO_0000526 = "SBO_0000526"
|
|
3033
|
+
PROTEIN_COMPLEX_FORMATION = "SBO_0000526"
|
|
3034
|
+
|
|
3035
|
+
# modular rate law
|
|
3036
|
+
SBO_0000527 = "SBO_0000527"
|
|
3037
|
+
MODULAR_RATE_LAW = "SBO_0000527"
|
|
3038
|
+
|
|
3039
|
+
# common modular rate law
|
|
3040
|
+
SBO_0000528 = "SBO_0000528"
|
|
3041
|
+
COMMON_MODULAR_RATE_LAW = "SBO_0000528"
|
|
3042
|
+
|
|
3043
|
+
# direct binding modular rate law
|
|
3044
|
+
SBO_0000529 = "SBO_0000529"
|
|
3045
|
+
DIRECT_BINDING_MODULAR_RATE_LAW = "SBO_0000529"
|
|
3046
|
+
|
|
3047
|
+
# simultaneous binding modular rate law
|
|
3048
|
+
SBO_0000530 = "SBO_0000530"
|
|
3049
|
+
SIMULTANEOUS_BINDING_MODULAR_RATE_LAW = "SBO_0000530"
|
|
3050
|
+
|
|
3051
|
+
# power-law modular rate law
|
|
3052
|
+
SBO_0000531 = "SBO_0000531"
|
|
3053
|
+
POWER_LAW_MODULAR_RATE_LAW = "SBO_0000531"
|
|
3054
|
+
|
|
3055
|
+
# force-dependent modular rate law
|
|
3056
|
+
SBO_0000532 = "SBO_0000532"
|
|
3057
|
+
FORCE_DEPENDENT_MODULAR_RATE_LAW = "SBO_0000532"
|
|
3058
|
+
|
|
3059
|
+
# specific activator
|
|
3060
|
+
SBO_0000533 = "SBO_0000533"
|
|
3061
|
+
SPECIFIC_ACTIVATOR = "SBO_0000533"
|
|
3062
|
+
|
|
3063
|
+
# catalytic activator
|
|
3064
|
+
SBO_0000534 = "SBO_0000534"
|
|
3065
|
+
CATALYTIC_ACTIVATOR = "SBO_0000534"
|
|
3066
|
+
|
|
3067
|
+
# binding activator
|
|
3068
|
+
SBO_0000535 = "SBO_0000535"
|
|
3069
|
+
BINDING_ACTIVATOR = "SBO_0000535"
|
|
3070
|
+
|
|
3071
|
+
# partial inhibitor
|
|
3072
|
+
SBO_0000536 = "SBO_0000536"
|
|
3073
|
+
PARTIAL_INHIBITOR = "SBO_0000536"
|
|
3074
|
+
|
|
3075
|
+
# complete inhibitor
|
|
3076
|
+
SBO_0000537 = "SBO_0000537"
|
|
3077
|
+
COMPLETE_INHIBITOR = "SBO_0000537"
|
|
3078
|
+
|
|
3079
|
+
# ionic permeability
|
|
3080
|
+
SBO_0000538 = "SBO_0000538"
|
|
3081
|
+
IONIC_PERMEABILITY = "SBO_0000538"
|
|
3082
|
+
|
|
3083
|
+
# probabilistic parameter
|
|
3084
|
+
SBO_0000539 = "SBO_0000539"
|
|
3085
|
+
PROBABILISTIC_PARAMETER = "SBO_0000539"
|
|
3086
|
+
|
|
3087
|
+
# fraction of an entity pool
|
|
3088
|
+
SBO_0000540 = "SBO_0000540"
|
|
3089
|
+
FRACTION_OF_AN_ENTITY_POOL = "SBO_0000540"
|
|
3090
|
+
|
|
3091
|
+
# mole fraction
|
|
3092
|
+
SBO_0000541 = "SBO_0000541"
|
|
3093
|
+
MOLE_FRACTION = "SBO_0000541"
|
|
3094
|
+
|
|
3095
|
+
# basic reproductive ratio
|
|
3096
|
+
SBO_0000542 = "SBO_0000542"
|
|
3097
|
+
BASIC_REPRODUCTIVE_RATIO = "SBO_0000542"
|
|
3098
|
+
|
|
3099
|
+
# protein aggregate
|
|
3100
|
+
SBO_0000543 = "SBO_0000543"
|
|
3101
|
+
PROTEIN_AGGREGATE = "SBO_0000543"
|
|
3102
|
+
|
|
3103
|
+
# metadata representation
|
|
3104
|
+
SBO_0000544 = "SBO_0000544"
|
|
3105
|
+
METADATA_REPRESENTATION = "SBO_0000544"
|
|
3106
|
+
|
|
3107
|
+
# systems description parameter
|
|
3108
|
+
SBO_0000545 = "SBO_0000545"
|
|
3109
|
+
SYSTEMS_DESCRIPTION_PARAMETER = "SBO_0000545"
|
|
3110
|
+
|
|
3111
|
+
# qualitative systems description parameter
|
|
3112
|
+
SBO_0000546 = "SBO_0000546"
|
|
3113
|
+
QUALITATIVE_SYSTEMS_DESCRIPTION_PARAMETER = "SBO_0000546"
|
|
3114
|
+
|
|
3115
|
+
# boolean logical framework
|
|
3116
|
+
SBO_0000547 = "SBO_0000547"
|
|
3117
|
+
BOOLEAN_LOGICAL_FRAMEWORK = "SBO_0000547"
|
|
3118
|
+
|
|
3119
|
+
# multi-valued logical framework
|
|
3120
|
+
SBO_0000548 = "SBO_0000548"
|
|
3121
|
+
MULTI_VALUED_LOGICAL_FRAMEWORK = "SBO_0000548"
|
|
3122
|
+
|
|
3123
|
+
# fuzzy logical framework
|
|
3124
|
+
SBO_0000549 = "SBO_0000549"
|
|
3125
|
+
FUZZY_LOGICAL_FRAMEWORK = "SBO_0000549"
|
|
3126
|
+
|
|
3127
|
+
# annotation
|
|
3128
|
+
SBO_0000550 = "SBO_0000550"
|
|
3129
|
+
ANNOTATION = "SBO_0000550"
|
|
3130
|
+
|
|
3131
|
+
# controlled short label
|
|
3132
|
+
SBO_0000551 = "SBO_0000551"
|
|
3133
|
+
CONTROLLED_SHORT_LABEL = "SBO_0000551"
|
|
3134
|
+
|
|
3135
|
+
# reference annotation
|
|
3136
|
+
SBO_0000552 = "SBO_0000552"
|
|
3137
|
+
REFERENCE_ANNOTATION = "SBO_0000552"
|
|
3138
|
+
|
|
3139
|
+
# bibliographical reference
|
|
3140
|
+
SBO_0000553 = "SBO_0000553"
|
|
3141
|
+
BIBLIOGRAPHICAL_REFERENCE = "SBO_0000553"
|
|
3142
|
+
|
|
3143
|
+
# database cross reference
|
|
3144
|
+
SBO_0000554 = "SBO_0000554"
|
|
3145
|
+
DATABASE_CROSS_REFERENCE = "SBO_0000554"
|
|
3146
|
+
|
|
3147
|
+
# controlled annotation
|
|
3148
|
+
SBO_0000555 = "SBO_0000555"
|
|
3149
|
+
CONTROLLED_ANNOTATION = "SBO_0000555"
|
|
3150
|
+
|
|
3151
|
+
# uncontrolled annotation
|
|
3152
|
+
SBO_0000556 = "SBO_0000556"
|
|
3153
|
+
UNCONTROLLED_ANNOTATION = "SBO_0000556"
|
|
3154
|
+
|
|
3155
|
+
# embedded annotation
|
|
3156
|
+
SBO_0000557 = "SBO_0000557"
|
|
3157
|
+
EMBEDDED_ANNOTATION = "SBO_0000557"
|
|
3158
|
+
|
|
3159
|
+
# specific activity
|
|
3160
|
+
SBO_0000558 = "SBO_0000558"
|
|
3161
|
+
SPECIFIC_ACTIVITY = "SBO_0000558"
|
|
3162
|
+
|
|
3163
|
+
# enzyme activity
|
|
3164
|
+
SBO_0000559 = "SBO_0000559"
|
|
3165
|
+
ENZYME_ACTIVITY = "SBO_0000559"
|
|
3166
|
+
|
|
3167
|
+
# mass action rate law for first order irreversible reactions, single essential stimulator, continuous scheme
|
|
3168
|
+
SBO_0000560 = "SBO_0000560"
|
|
3169
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_IRREVERSIBLE_REACTIONS__SINGLE_ESSENTIAL_STIMULATOR__CONTINUOUS_SCHEME = (
|
|
3170
|
+
"SBO_0000560"
|
|
3171
|
+
)
|
|
3172
|
+
|
|
3173
|
+
# mass action rate law for first order irreversible reactions, single essential stimulator, discrete scheme
|
|
3174
|
+
SBO_0000561 = "SBO_0000561"
|
|
3175
|
+
MASS_ACTION_RATE_LAW_FOR_FIRST_ORDER_IRREVERSIBLE_REACTIONS__SINGLE_ESSENTIAL_STIMULATOR__DISCRETE_SCHEME = (
|
|
3176
|
+
"SBO_0000561"
|
|
3177
|
+
)
|
|
3178
|
+
|
|
3179
|
+
# mass action like rate law for second order irreversible reactions, one reactant, one essential stimulator
|
|
3180
|
+
SBO_0000562 = "SBO_0000562"
|
|
3181
|
+
MASS_ACTION_LIKE_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__ONE_ESSENTIAL_STIMULATOR = (
|
|
3182
|
+
"SBO_0000562"
|
|
3183
|
+
)
|
|
3184
|
+
|
|
3185
|
+
# mass action like rate law for second order irreversible reactions, one reactant, one essential stimulator, continuous scheme
|
|
3186
|
+
SBO_0000563 = "SBO_0000563"
|
|
3187
|
+
MASS_ACTION_LIKE_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__ONE_ESSENTIAL_STIMULATOR__CONTINUOUS_SCHEME = (
|
|
3188
|
+
"SBO_0000563"
|
|
3189
|
+
)
|
|
3190
|
+
|
|
3191
|
+
# mass action like rate law for second order irreversible reactions, one reactant, one essential stimulator, discrete scheme
|
|
3192
|
+
SBO_0000564 = "SBO_0000564"
|
|
3193
|
+
MASS_ACTION_LIKE_RATE_LAW_FOR_SECOND_ORDER_IRREVERSIBLE_REACTIONS__ONE_REACTANT__ONE_ESSENTIAL_STIMULATOR__DISCRETE_SCHEME = (
|
|
3194
|
+
"SBO_0000564"
|
|
3195
|
+
)
|
|
3196
|
+
|
|
3197
|
+
# systems description constant
|
|
3198
|
+
SBO_0000565 = "SBO_0000565"
|
|
3199
|
+
SYSTEMS_DESCRIPTION_CONSTANT = "SBO_0000565"
|
|
3200
|
+
|
|
3201
|
+
# relative permeability
|
|
3202
|
+
SBO_0000566 = "SBO_0000566"
|
|
3203
|
+
RELATIVE_PERMEABILITY = "SBO_0000566"
|
|
3204
|
+
|
|
3205
|
+
# universal gas constant
|
|
3206
|
+
SBO_0000567 = "SBO_0000567"
|
|
3207
|
+
UNIVERSAL_GAS_CONSTANT = "SBO_0000567"
|
|
3208
|
+
|
|
3209
|
+
# Faraday constant
|
|
3210
|
+
SBO_0000568 = "SBO_0000568"
|
|
3211
|
+
FARADAY_CONSTANT = "SBO_0000568"
|
|
3212
|
+
|
|
3213
|
+
# Goldman equation
|
|
3214
|
+
SBO_0000569 = "SBO_0000569"
|
|
3215
|
+
GOLDMAN_EQUATION = "SBO_0000569"
|
|
3216
|
+
|
|
3217
|
+
# Nernst potential
|
|
3218
|
+
SBO_0000570 = "SBO_0000570"
|
|
3219
|
+
NERNST_POTENTIAL = "SBO_0000570"
|
|
3220
|
+
|
|
3221
|
+
# thermodynamic parameter
|
|
3222
|
+
SBO_0000571 = "SBO_0000571"
|
|
3223
|
+
THERMODYNAMIC_PARAMETER = "SBO_0000571"
|
|
3224
|
+
|
|
3225
|
+
# enthalpy
|
|
3226
|
+
SBO_0000572 = "SBO_0000572"
|
|
3227
|
+
ENTHALPY = "SBO_0000572"
|
|
3228
|
+
|
|
3229
|
+
# enthalpy change
|
|
3230
|
+
SBO_0000573 = "SBO_0000573"
|
|
3231
|
+
ENTHALPY_CHANGE = "SBO_0000573"
|
|
3232
|
+
|
|
3233
|
+
# standard enthalpy of formation
|
|
3234
|
+
SBO_0000574 = "SBO_0000574"
|
|
3235
|
+
STANDARD_ENTHALPY_OF_FORMATION = "SBO_0000574"
|
|
3236
|
+
|
|
3237
|
+
# standard enthalpy of reaction
|
|
3238
|
+
SBO_0000575 = "SBO_0000575"
|
|
3239
|
+
STANDARD_ENTHALPY_OF_REACTION = "SBO_0000575"
|
|
3240
|
+
|
|
3241
|
+
# entropy
|
|
3242
|
+
SBO_0000576 = "SBO_0000576"
|
|
3243
|
+
ENTROPY = "SBO_0000576"
|
|
3244
|
+
|
|
3245
|
+
# entropy change
|
|
3246
|
+
SBO_0000577 = "SBO_0000577"
|
|
3247
|
+
ENTROPY_CHANGE = "SBO_0000577"
|
|
3248
|
+
|
|
3249
|
+
# standard entropy of reaction
|
|
3250
|
+
SBO_0000578 = "SBO_0000578"
|
|
3251
|
+
STANDARD_ENTROPY_OF_REACTION_ = "SBO_0000578"
|
|
3252
|
+
|
|
3253
|
+
# standard entropy of formation
|
|
3254
|
+
SBO_0000579 = "SBO_0000579"
|
|
3255
|
+
STANDARD_ENTROPY_OF_FORMATION = "SBO_0000579"
|
|
3256
|
+
|
|
3257
|
+
# Gibbs free energy
|
|
3258
|
+
SBO_0000580 = "SBO_0000580"
|
|
3259
|
+
GIBBS_FREE_ENERGY = "SBO_0000580"
|
|
3260
|
+
|
|
3261
|
+
# Gibbs free energy change
|
|
3262
|
+
SBO_0000581 = "SBO_0000581"
|
|
3263
|
+
GIBBS_FREE_ENERGY_CHANGE = "SBO_0000581"
|
|
3264
|
+
|
|
3265
|
+
# standard Gibbs free energy of formation
|
|
3266
|
+
SBO_0000582 = "SBO_0000582"
|
|
3267
|
+
STANDARD_GIBBS_FREE_ENERGY_OF_FORMATION = "SBO_0000582"
|
|
3268
|
+
|
|
3269
|
+
# standard Gibbs free energy of reaction
|
|
3270
|
+
SBO_0000583 = "SBO_0000583"
|
|
3271
|
+
STANDARD_GIBBS_FREE_ENERGY_OF_REACTION = "SBO_0000583"
|
|
3272
|
+
|
|
3273
|
+
# temporal offset
|
|
3274
|
+
SBO_0000584 = "SBO_0000584"
|
|
3275
|
+
TEMPORAL_OFFSET = "SBO_0000584"
|
|
3276
|
+
|
|
3277
|
+
# simulation duration
|
|
3278
|
+
SBO_0000585 = "SBO_0000585"
|
|
3279
|
+
SIMULATION_DURATION = "SBO_0000585"
|
|
3280
|
+
|
|
3281
|
+
# model time
|
|
3282
|
+
SBO_0000586 = "SBO_0000586"
|
|
3283
|
+
MODEL_TIME = "SBO_0000586"
|
|
3284
|
+
|
|
3285
|
+
# transcellular membrane influx reaction
|
|
3286
|
+
SBO_0000587 = "SBO_0000587"
|
|
3287
|
+
TRANSCELLULAR_MEMBRANE_INFLUX_REACTION = "SBO_0000587"
|
|
3288
|
+
|
|
3289
|
+
# transcellular membrane efflux reaction
|
|
3290
|
+
SBO_0000588 = "SBO_0000588"
|
|
3291
|
+
TRANSCELLULAR_MEMBRANE_EFFLUX_REACTION = "SBO_0000588"
|
|
3292
|
+
|
|
3293
|
+
# genetic production
|
|
3294
|
+
SBO_0000589 = "SBO_0000589"
|
|
3295
|
+
GENETIC_PRODUCTION = "SBO_0000589"
|
|
3296
|
+
|
|
3297
|
+
# promoter
|
|
3298
|
+
SBO_0000590 = "SBO_0000590"
|
|
3299
|
+
PROMOTER = "SBO_0000590"
|
|
3300
|
+
|
|
3301
|
+
# petri net transition
|
|
3302
|
+
SBO_0000591 = "SBO_0000591"
|
|
3303
|
+
PETRI_NET_TRANSITION = "SBO_0000591"
|
|
3304
|
+
|
|
3305
|
+
# discrete amount of an entity pool
|
|
3306
|
+
SBO_0000592 = "SBO_0000592"
|
|
3307
|
+
DISCRETE_AMOUNT_OF_AN_ENTITY_POOL = "SBO_0000592"
|
|
3308
|
+
|
|
3309
|
+
# petri net place
|
|
3310
|
+
SBO_0000593 = "SBO_0000593"
|
|
3311
|
+
PETRI_NET_PLACE = "SBO_0000593"
|
|
3312
|
+
|
|
3313
|
+
# neutral participant
|
|
3314
|
+
SBO_0000594 = "SBO_0000594"
|
|
3315
|
+
NEUTRAL_PARTICIPANT = "SBO_0000594"
|
|
3316
|
+
|
|
3317
|
+
# dual-activity modifier
|
|
3318
|
+
SBO_0000595 = "SBO_0000595"
|
|
3319
|
+
DUAL_ACTIVITY_MODIFIER = "SBO_0000595"
|
|
3320
|
+
|
|
3321
|
+
# modifier of unknown activity
|
|
3322
|
+
SBO_0000596 = "SBO_0000596"
|
|
3323
|
+
MODIFIER_OF_UNKNOWN_ACTIVITY = "SBO_0000596"
|
|
3324
|
+
|
|
3325
|
+
# silencer
|
|
3326
|
+
SBO_0000597 = "SBO_0000597"
|
|
3327
|
+
SILENCER = "SBO_0000597"
|
|
3328
|
+
|
|
3329
|
+
# port
|
|
3330
|
+
SBO_0000599 = "SBO_0000599"
|
|
3331
|
+
PORT = "SBO_0000599"
|
|
3332
|
+
|
|
3333
|
+
# input port
|
|
3334
|
+
SBO_0000600 = "SBO_0000600"
|
|
3335
|
+
INPUT_PORT = "SBO_0000600"
|
|
3336
|
+
|
|
3337
|
+
# output port
|
|
3338
|
+
SBO_0000601 = "SBO_0000601"
|
|
3339
|
+
OUTPUT_PORT = "SBO_0000601"
|
|
3340
|
+
|
|
3341
|
+
# logical parameter
|
|
3342
|
+
SBO_0000602 = "SBO_0000602"
|
|
3343
|
+
LOGICAL_PARAMETER = "SBO_0000602"
|
|
3344
|
+
|
|
3345
|
+
# side product
|
|
3346
|
+
SBO_0000603 = "SBO_0000603"
|
|
3347
|
+
SIDE_PRODUCT = "SBO_0000603"
|
|
3348
|
+
|
|
3349
|
+
# side substrate
|
|
3350
|
+
SBO_0000604 = "SBO_0000604"
|
|
3351
|
+
SIDE_SUBSTRATE = "SBO_0000604"
|
|
3352
|
+
|
|
3353
|
+
# high affinity receptor
|
|
3354
|
+
SBO_0000605 = "SBO_0000605"
|
|
3355
|
+
HIGH_AFFINITY_RECEPTOR = "SBO_0000605"
|
|
3356
|
+
|
|
3357
|
+
# low affinity receptor
|
|
3358
|
+
SBO_0000606 = "SBO_0000606"
|
|
3359
|
+
LOW_AFFINITY_RECEPTOR = "SBO_0000606"
|
|
3360
|
+
|
|
3361
|
+
# dimer
|
|
3362
|
+
SBO_0000607 = "SBO_0000607"
|
|
3363
|
+
DIMER = "SBO_0000607"
|
|
3364
|
+
|
|
3365
|
+
# homodimer
|
|
3366
|
+
SBO_0000608 = "SBO_0000608"
|
|
3367
|
+
HOMODIMER = "SBO_0000608"
|
|
3368
|
+
|
|
3369
|
+
# heterodimer
|
|
3370
|
+
SBO_0000609 = "SBO_0000609"
|
|
3371
|
+
HETERODIMER = "SBO_0000609"
|
|
3372
|
+
|
|
3373
|
+
# growth rate
|
|
3374
|
+
SBO_0000610 = "SBO_0000610"
|
|
3375
|
+
GROWTH_RATE = "SBO_0000610"
|
|
3376
|
+
|
|
3377
|
+
# effective catalytic rate
|
|
3378
|
+
SBO_0000611 = "SBO_0000611"
|
|
3379
|
+
EFFECTIVE_CATALYTIC_RATE = "SBO_0000611"
|
|
3380
|
+
|
|
3381
|
+
# rate of reaction
|
|
3382
|
+
SBO_0000612 = "SBO_0000612"
|
|
3383
|
+
RATE_OF_REACTION = "SBO_0000612"
|
|
3384
|
+
|
|
3385
|
+
# reaction parameter
|
|
3386
|
+
SBO_0000613 = "SBO_0000613"
|
|
3387
|
+
REACTION_PARAMETER = "SBO_0000613"
|
|
3388
|
+
|
|
3389
|
+
# rate of reaction (concentration)
|
|
3390
|
+
SBO_0000614 = "SBO_0000614"
|
|
3391
|
+
RATE_OF_REACTION__CONCENTRATION_ = "SBO_0000614"
|
|
3392
|
+
|
|
3393
|
+
# rate of reaction (amount)
|
|
3394
|
+
SBO_0000615 = "SBO_0000615"
|
|
3395
|
+
RATE_OF_REACTION__AMOUNT_ = "SBO_0000615"
|
|
3396
|
+
|
|
3397
|
+
# extent of reaction
|
|
3398
|
+
SBO_0000616 = "SBO_0000616"
|
|
3399
|
+
EXTENT_OF_REACTION = "SBO_0000616"
|
|
3400
|
+
|
|
3401
|
+
# Gibbs free energy of reaction
|
|
3402
|
+
SBO_0000617 = "SBO_0000617"
|
|
3403
|
+
GIBBS_FREE_ENERGY_OF_REACTION = "SBO_0000617"
|
|
3404
|
+
|
|
3405
|
+
# reaction affinity
|
|
3406
|
+
SBO_0000618 = "SBO_0000618"
|
|
3407
|
+
REACTION_AFFINITY = "SBO_0000618"
|
|
3408
|
+
|
|
3409
|
+
# transformed Gibbs free energy change
|
|
3410
|
+
SBO_0000619 = "SBO_0000619"
|
|
3411
|
+
TRANSFORMED_GIBBS_FREE_ENERGY_CHANGE = "SBO_0000619"
|
|
3412
|
+
|
|
3413
|
+
# transformed standard Gibbs free energy of reaction
|
|
3414
|
+
SBO_0000620 = "SBO_0000620"
|
|
3415
|
+
TRANSFORMED_STANDARD_GIBBS_FREE_ENERGY_OF_REACTION = "SBO_0000620"
|
|
3416
|
+
|
|
3417
|
+
# transformed standard Gibbs free energy of formation
|
|
3418
|
+
SBO_0000621 = "SBO_0000621"
|
|
3419
|
+
TRANSFORMED_STANDARD_GIBBS_FREE_ENERGY_OF_FORMATION = "SBO_0000621"
|
|
3420
|
+
|
|
3421
|
+
# transformed Gibbs free energy of reaction
|
|
3422
|
+
SBO_0000622 = "SBO_0000622"
|
|
3423
|
+
TRANSFORMED_GIBBS_FREE_ENERGY_OF_REACTION = "SBO_0000622"
|
|
3424
|
+
|
|
3425
|
+
# ionic strength
|
|
3426
|
+
SBO_0000623 = "SBO_0000623"
|
|
3427
|
+
IONIC_STRENGTH = "SBO_0000623"
|
|
3428
|
+
|
|
3429
|
+
# flux balance framework
|
|
3430
|
+
SBO_0000624 = "SBO_0000624"
|
|
3431
|
+
FLUX_BALANCE_FRAMEWORK = "SBO_0000624"
|
|
3432
|
+
|
|
3433
|
+
# flux bound
|
|
3434
|
+
SBO_0000625 = "SBO_0000625"
|
|
3435
|
+
FLUX_BOUND = "SBO_0000625"
|
|
3436
|
+
|
|
3437
|
+
# default flux bound
|
|
3438
|
+
SBO_0000626 = "SBO_0000626"
|
|
3439
|
+
DEFAULT_FLUX_BOUND = "SBO_0000626"
|
|
3440
|
+
|
|
3441
|
+
# exchange reaction
|
|
3442
|
+
SBO_0000627 = "SBO_0000627"
|
|
3443
|
+
EXCHANGE_REACTION = "SBO_0000627"
|
|
3444
|
+
|
|
3445
|
+
# demand reaction
|
|
3446
|
+
SBO_0000628 = "SBO_0000628"
|
|
3447
|
+
DEMAND_REACTION = "SBO_0000628"
|
|
3448
|
+
|
|
3449
|
+
# biomass production
|
|
3450
|
+
SBO_0000629 = "SBO_0000629"
|
|
3451
|
+
BIOMASS_PRODUCTION = "SBO_0000629"
|
|
3452
|
+
|
|
3453
|
+
# ATP maintenance
|
|
3454
|
+
SBO_0000630 = "SBO_0000630"
|
|
3455
|
+
ATP_MAINTENANCE = "SBO_0000630"
|
|
3456
|
+
|
|
3457
|
+
# pseudoreaction
|
|
3458
|
+
SBO_0000631 = "SBO_0000631"
|
|
3459
|
+
PSEUDOREACTION = "SBO_0000631"
|
|
3460
|
+
|
|
3461
|
+
# sink reaction
|
|
3462
|
+
SBO_0000632 = "SBO_0000632"
|
|
3463
|
+
SINK_REACTION = "SBO_0000632"
|
|
3464
|
+
|
|
3465
|
+
# subsystem
|
|
3466
|
+
SBO_0000633 = "SBO_0000633"
|
|
3467
|
+
SUBSYSTEM = "SBO_0000633"
|
|
3468
|
+
|
|
3469
|
+
# DNA segment
|
|
3470
|
+
SBO_0000634 = "SBO_0000634"
|
|
3471
|
+
DNA_SEGMENT = "SBO_0000634"
|
|
3472
|
+
|
|
3473
|
+
# RNA segment
|
|
3474
|
+
SBO_0000635 = "SBO_0000635"
|
|
3475
|
+
RNA_SEGMENT = "SBO_0000635"
|
|
3476
|
+
|
|
3477
|
+
# allosteric activator
|
|
3478
|
+
SBO_0000636 = "SBO_0000636"
|
|
3479
|
+
ALLOSTERIC_ACTIVATOR = "SBO_0000636"
|
|
3480
|
+
|
|
3481
|
+
# non-allosteric activator
|
|
3482
|
+
SBO_0000637 = "SBO_0000637"
|
|
3483
|
+
NON_ALLOSTERIC_ACTIVATOR = "SBO_0000637"
|
|
3484
|
+
|
|
3485
|
+
# irreversible inhibitor
|
|
3486
|
+
SBO_0000638 = "SBO_0000638"
|
|
3487
|
+
IRREVERSIBLE_INHIBITOR = "SBO_0000638"
|
|
3488
|
+
|
|
3489
|
+
# allosteric inhibitor
|
|
3490
|
+
SBO_0000639 = "SBO_0000639"
|
|
3491
|
+
ALLOSTERIC_INHIBITOR = "SBO_0000639"
|
|
3492
|
+
|
|
3493
|
+
# uncompetitive inhibitor
|
|
3494
|
+
SBO_0000640 = "SBO_0000640"
|
|
3495
|
+
UNCOMPETITIVE_INHIBITOR = "SBO_0000640"
|
|
3496
|
+
|
|
3497
|
+
# pMg
|
|
3498
|
+
SBO_0000641 = "SBO_0000641"
|
|
3499
|
+
PMG = "SBO_0000641"
|
|
3500
|
+
|
|
3501
|
+
# inhibited
|
|
3502
|
+
SBO_0000642 = "SBO_0000642"
|
|
3503
|
+
INHIBITED = "SBO_0000642"
|
|
3504
|
+
|
|
3505
|
+
# stimulated
|
|
3506
|
+
SBO_0000643 = "SBO_0000643"
|
|
3507
|
+
STIMULATED = "SBO_0000643"
|
|
3508
|
+
|
|
3509
|
+
# modified
|
|
3510
|
+
SBO_0000644 = "SBO_0000644"
|
|
3511
|
+
MODIFIED = "SBO_0000644"
|
|
3512
|
+
|
|
3513
|
+
# template
|
|
3514
|
+
SBO_0000645 = "SBO_0000645"
|
|
3515
|
+
TEMPLATE = "SBO_0000645"
|
|
3516
|
+
|
|
3517
|
+
# mass action rate law for reversible reactions, continuous schema
|
|
3518
|
+
SBO_0000646 = "SBO_0000646"
|
|
3519
|
+
MASS_ACTION_RATE_LAW_FOR_REVERSIBLE_REACTIONS__CONTINUOUS_SCHEMA = "SBO_0000646"
|
|
3520
|
+
|
|
3521
|
+
# molecular mass
|
|
3522
|
+
SBO_0000647 = "SBO_0000647"
|
|
3523
|
+
MOLECULAR_MASS = "SBO_0000647"
|
|
3524
|
+
|
|
3525
|
+
# protein molecular mass
|
|
3526
|
+
SBO_0000648 = "SBO_0000648"
|
|
3527
|
+
PROTEIN_MOLECULAR_MASS = "SBO_0000648"
|
|
3528
|
+
|
|
3529
|
+
# biomass
|
|
3530
|
+
SBO_0000649 = "SBO_0000649"
|
|
3531
|
+
BIOMASS = "SBO_0000649"
|
|
3532
|
+
|
|
3533
|
+
# reversible process
|
|
3534
|
+
SBO_0000650 = "SBO_0000650"
|
|
3535
|
+
REVERSIBLE_PROCESS = "SBO_0000650"
|
|
3536
|
+
|
|
3537
|
+
# irreversible process
|
|
3538
|
+
SBO_0000651 = "SBO_0000651"
|
|
3539
|
+
IRREVERSIBLE_PROCESS = "SBO_0000651"
|
|
3540
|
+
|
|
3541
|
+
# polymerization
|
|
3542
|
+
SBO_0000652 = "SBO_0000652"
|
|
3543
|
+
POLYMERIZATION = "SBO_0000652"
|
|
3544
|
+
|
|
3545
|
+
# depolymerization
|
|
3546
|
+
SBO_0000653 = "SBO_0000653"
|
|
3547
|
+
DEPOLYMERIZATION = "SBO_0000653"
|
|
3548
|
+
|
|
3549
|
+
# co-transport reaction
|
|
3550
|
+
SBO_0000654 = "SBO_0000654"
|
|
3551
|
+
CO_TRANSPORT_REACTION = "SBO_0000654"
|
|
3552
|
+
|
|
3553
|
+
# transport reaction
|
|
3554
|
+
SBO_0000655 = "SBO_0000655"
|
|
3555
|
+
TRANSPORT_REACTION = "SBO_0000655"
|
|
3556
|
+
|
|
3557
|
+
# activation
|
|
3558
|
+
SBO_0000656 = "SBO_0000656"
|
|
3559
|
+
ACTIVATION = "SBO_0000656"
|
|
3560
|
+
|
|
3561
|
+
# active transport
|
|
3562
|
+
SBO_0000657 = "SBO_0000657"
|
|
3563
|
+
ACTIVE_TRANSPORT = "SBO_0000657"
|
|
3564
|
+
|
|
3565
|
+
# passive transport
|
|
3566
|
+
SBO_0000658 = "SBO_0000658"
|
|
3567
|
+
PASSIVE_TRANSPORT = "SBO_0000658"
|
|
3568
|
+
|
|
3569
|
+
# symporter-mediated transport
|
|
3570
|
+
SBO_0000659 = "SBO_0000659"
|
|
3571
|
+
SYMPORTER_MEDIATED_TRANSPORT = "SBO_0000659"
|
|
3572
|
+
|
|
3573
|
+
# antiporter-mediated transport
|
|
3574
|
+
SBO_0000660 = "SBO_0000660"
|
|
3575
|
+
ANTIPORTER_MEDIATED_TRANSPORT = "SBO_0000660"
|
|
3576
|
+
|
|
3577
|
+
# capacity
|
|
3578
|
+
SBO_0000661 = "SBO_0000661"
|
|
3579
|
+
CAPACITY = "SBO_0000661"
|
|
3580
|
+
|
|
3581
|
+
# occupancy
|
|
3582
|
+
SBO_0000662 = "SBO_0000662"
|
|
3583
|
+
OCCUPANCY = "SBO_0000662"
|
|
3584
|
+
|
|
3585
|
+
# fractional occupancy
|
|
3586
|
+
SBO_0000663 = "SBO_0000663"
|
|
3587
|
+
FRACTIONAL_OCCUPANCY = "SBO_0000663"
|
|
3588
|
+
|
|
3589
|
+
# contained entity
|
|
3590
|
+
SBO_0000664 = "SBO_0000664"
|
|
3591
|
+
CONTAINED_ENTITY = "SBO_0000664"
|
|
3592
|
+
|
|
3593
|
+
# inactivation
|
|
3594
|
+
SBO_0000665 = "SBO_0000665"
|
|
3595
|
+
INACTIVATION = "SBO_0000665"
|
|
3596
|
+
|
|
3597
|
+
# chain length
|
|
3598
|
+
SBO_0000666 = "SBO_0000666"
|
|
3599
|
+
CHAIN_LENGTH = "SBO_0000666"
|
|
3600
|
+
|
|
3601
|
+
# protein chain length
|
|
3602
|
+
SBO_0000667 = "SBO_0000667"
|
|
3603
|
+
PROTEIN_CHAIN_LENGTH = "SBO_0000667"
|
|
3604
|
+
|
|
3605
|
+
# yield
|
|
3606
|
+
SBO_0000668 = "SBO_0000668"
|
|
3607
|
+
YIELD = "SBO_0000668"
|
|
3608
|
+
|
|
3609
|
+
# biomass yield on substrate
|
|
3610
|
+
SBO_0000669 = "SBO_0000669"
|
|
3611
|
+
BIOMASS_YIELD_ON_SUBSTRATE = "SBO_0000669"
|
|
3612
|
+
|
|
3613
|
+
# product yield on substrate
|
|
3614
|
+
SBO_0000670 = "SBO_0000670"
|
|
3615
|
+
PRODUCT_YIELD_ON_SUBSTRATE = "SBO_0000670"
|
|
3616
|
+
|
|
3617
|
+
# non-enzymatic catalyst
|
|
3618
|
+
SBO_0000671 = "SBO_0000671"
|
|
3619
|
+
NON_ENZYMATIC_CATALYST = "SBO_0000671"
|
|
3620
|
+
|
|
3621
|
+
# spontaneous reaction
|
|
3622
|
+
SBO_0000672 = "SBO_0000672"
|
|
3623
|
+
SPONTANEOUS_REACTION = "SBO_0000672"
|
|
3624
|
+
|
|
3625
|
+
# forward effective catalytic rate
|
|
3626
|
+
SBO_0000673 = "SBO_0000673"
|
|
3627
|
+
FORWARD_EFFECTIVE_CATALYTIC_RATE = "SBO_0000673"
|
|
3628
|
+
|
|
3629
|
+
# reverse effective catalytic rate
|
|
3630
|
+
SBO_0000674 = "SBO_0000674"
|
|
3631
|
+
REVERSE_EFFECTIVE_CATALYTIC_RATE = "SBO_0000674"
|
|
3632
|
+
|
|
3633
|
+
# deterministic non-spatial continuous framework
|
|
3634
|
+
SBO_0000675 = "SBO_0000675"
|
|
3635
|
+
DETERMINISTIC_NON_SPATIAL_CONTINUOUS_FRAMEWORK = "SBO_0000675"
|
|
3636
|
+
|
|
3637
|
+
# stochastic non-spatial continuous framework
|
|
3638
|
+
SBO_0000676 = "SBO_0000676"
|
|
3639
|
+
STOCHASTIC_NON_SPATIAL_CONTINUOUS_FRAMEWORK = "SBO_0000676"
|
|
3640
|
+
|
|
3641
|
+
# population-based discrete spatial simulation
|
|
3642
|
+
SBO_0000677 = "SBO_0000677"
|
|
3643
|
+
POPULATION_BASED_DISCRETE_SPATIAL_SIMULATION = "SBO_0000677"
|
|
3644
|
+
|
|
3645
|
+
# particle-based discrete spatial simulation
|
|
3646
|
+
SBO_0000678 = "SBO_0000678"
|
|
3647
|
+
PARTICLE_BASED_DISCRETE_SPATIAL_SIMULATION = "SBO_0000678"
|
|
3648
|
+
|
|
3649
|
+
# population-based discrete non-spatial simulation
|
|
3650
|
+
SBO_0000679 = "SBO_0000679"
|
|
3651
|
+
POPULATION_BASED_DISCRETE_NON_SPATIAL_SIMULATION = "SBO_0000679"
|
|
3652
|
+
|
|
3653
|
+
# particle-based discrete non-spatial simulation
|
|
3654
|
+
SBO_0000680 = "SBO_0000680"
|
|
3655
|
+
PARTICLE_BASED_DISCRETE_NON_SPATIAL_SIMULATION = "SBO_0000680"
|
|
3656
|
+
|
|
3657
|
+
# hybrid framework
|
|
3658
|
+
SBO_0000681 = "SBO_0000681"
|
|
3659
|
+
HYBRID_FRAMEWORK = "SBO_0000681"
|
|
3660
|
+
|
|
3661
|
+
# hybrid spatial framework
|
|
3662
|
+
SBO_0000682 = "SBO_0000682"
|
|
3663
|
+
HYBRID_SPATIAL_FRAMEWORK = "SBO_0000682"
|
|
3664
|
+
|
|
3665
|
+
# hybrid non-spatial framework
|
|
3666
|
+
SBO_0000683 = "SBO_0000683"
|
|
3667
|
+
HYBRID_NON_SPATIAL_FRAMEWORK = "SBO_0000683"
|
|
3668
|
+
|
|
3669
|
+
# hybrid flux balance-deterministic continuous non-spatial framework
|
|
3670
|
+
SBO_0000684 = "SBO_0000684"
|
|
3671
|
+
HYBRID_FLUX_BALANCE_DETERMINISTIC_CONTINUOUS_NON_SPATIAL_FRAMEWORK = "SBO_0000684"
|
|
3672
|
+
|
|
3673
|
+
# hybrid flux balance-discrete non-spatial framework
|
|
3674
|
+
SBO_0000685 = "SBO_0000685"
|
|
3675
|
+
HYBRID_FLUX_BALANCE_DISCRETE_NON_SPATIAL_FRAMEWORK = "SBO_0000685"
|
|
3676
|
+
|
|
3677
|
+
# hybrid flux balance-logical-deterministic continuous non-spatial framework
|
|
3678
|
+
SBO_0000686 = "SBO_0000686"
|
|
3679
|
+
HYBRID_FLUX_BALANCE_LOGICAL_DETERMINISTIC_CONTINUOUS_NON_SPATIAL_FRAMEWORK = (
|
|
3680
|
+
"SBO_0000686"
|
|
3681
|
+
)
|
|
3682
|
+
|
|
3683
|
+
# hybrid flux balance-logical non-spatial framework
|
|
3684
|
+
SBO_0000687 = "SBO_0000687"
|
|
3685
|
+
HYBRID_FLUX_BALANCE_LOGICAL_NON_SPATIAL_FRAMEWORK = "SBO_0000687"
|
|
3686
|
+
|
|
3687
|
+
# hybrid flux logical-discrete non-spatial framework
|
|
3688
|
+
SBO_0000688 = "SBO_0000688"
|
|
3689
|
+
HYBRID_FLUX_LOGICAL_DISCRETE_NON_SPATIAL_FRAMEWORK = "SBO_0000688"
|
|
3690
|
+
|
|
3691
|
+
# hybrid continuous-discrete non-spatial framework
|
|
3692
|
+
SBO_0000689 = "SBO_0000689"
|
|
3693
|
+
HYBRID_CONTINUOUS_DISCRETE_NON_SPATIAL_FRAMEWORK = "SBO_0000689"
|
|
3694
|
+
|
|
3695
|
+
# hybrid deterministic continuous-discrete non-spatial framework
|
|
3696
|
+
SBO_0000690 = "SBO_0000690"
|
|
3697
|
+
HYBRID_DETERMINISTIC_CONTINUOUS_DISCRETE_NON_SPATIAL_FRAMEWORK = "SBO_0000690"
|
|
3698
|
+
|
|
3699
|
+
# hybrid stochastic continuous-discrete non-spatial framework
|
|
3700
|
+
SBO_0000691 = "SBO_0000691"
|
|
3701
|
+
HYBRID_STOCHASTIC_CONTINUOUS_DISCRETE_NON_SPATIAL_FRAMEWORK = "SBO_0000691"
|
|
3702
|
+
|
|
3703
|
+
# resource balance framework
|
|
3704
|
+
SBO_0000692 = "SBO_0000692"
|
|
3705
|
+
RESOURCE_BALANCE_FRAMEWORK = "SBO_0000692"
|
|
3706
|
+
|
|
3707
|
+
# constraint-based framework
|
|
3708
|
+
SBO_0000693 = "SBO_0000693"
|
|
3709
|
+
CONSTRAINT_BASED_FRAMEWORK = "SBO_0000693"
|
|
3710
|
+
|
|
3711
|
+
# optimization framework
|
|
3712
|
+
SBO_0000694 = "SBO_0000694"
|
|
3713
|
+
OPTIMIZATION_FRAMEWORK = "SBO_0000694"
|
|
3714
|
+
|
|
3715
|
+
# ligation
|
|
3716
|
+
SBO_0000695 = "SBO_0000695"
|
|
3717
|
+
LIGATION = "SBO_0000695"
|
|
3718
|
+
|
|
3719
|
+
# part of
|
|
3720
|
+
part_of = "part_of"
|
|
3721
|
+
PART_OF = "part_of"
|
|
3722
|
+
|
|
3723
|
+
@staticmethod
|
|
3724
|
+
def get_name(sbo: "SBO") -> Optional[str]:
|
|
3725
|
+
"""Get name for term.
|
|
3726
|
+
|
|
3727
|
+
:returns: None if term does not exist in ontology.
|
|
3728
|
+
"""
|
|
3729
|
+
return _terms.get(sbo.value, None)
|
|
3730
|
+
|
|
3731
|
+
@classmethod
|
|
3732
|
+
def validate(cls, sbo: "SBOType") -> "SBO":
|
|
3733
|
+
"""Validate and normalize sbo."""
|
|
3734
|
+
term: "SBO"
|
|
3735
|
+
if isinstance(sbo, str):
|
|
3736
|
+
if not sbo.startswith("SBO"):
|
|
3737
|
+
raise ValueError(sbo + " is not a SBO id.")
|
|
3738
|
+
if sbo.startswith("SBO:"):
|
|
3739
|
+
sbo = sbo.replace(":", "_")
|
|
3740
|
+
|
|
3741
|
+
term = getattr(cls, sbo)
|
|
3742
|
+
|
|
3743
|
+
elif isinstance(sbo, "SBO"):
|
|
3744
|
+
term = sbo
|
|
3745
|
+
else:
|
|
3746
|
+
raise ValueError
|
|
3747
|
+
|
|
3748
|
+
return term
|
|
3749
|
+
|
|
3750
|
+
|
|
3751
|
+
__all__ = [
|
|
3752
|
+
"SBO",
|
|
3753
|
+
"SBOType",
|
|
3754
|
+
]
|