pylineament 0.1.0__py3-none-any.whl
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- pylineament/__init__.py +0 -0
- pylineament/pylineament.py +641 -0
- pylineament/pylineament_ui.py +766 -0
- pylineament-0.1.0.dist-info/METADATA +39 -0
- pylineament-0.1.0.dist-info/RECORD +8 -0
- pylineament-0.1.0.dist-info/WHEEL +5 -0
- pylineament-0.1.0.dist-info/entry_points.txt +2 -0
- pylineament-0.1.0.dist-info/top_level.txt +1 -0
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import sys
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import numpy as np
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import pyqtgraph as pg
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from PyQt5.QtWidgets import (QApplication, QMainWindow, QWidget, QVBoxLayout,
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QPushButton, QFileDialog,
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QTabWidget, QTextEdit,
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QHBoxLayout, QSlider, QLabel,
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QSpacerItem, QSizePolicy, QComboBox,
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QLineEdit, QCheckBox, QGridLayout, QProgressBar, QSplitter )
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from PyQt5.QtCore import QThreadPool, QRunnable, pyqtSignal, QObject
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from skimage.transform import rescale
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from PyQt5.QtCore import Qt
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import numpy as np
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import pandas as pd
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from pylineament import (dem_to_line, read_raster,
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extract_lineament_points,
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convert_points_to_line,
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dem_to_line_runner,
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dem_to_line_runner_small,
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reduce_lines,
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image_splitting,
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merge_lines_csv_to_shp,
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merge_single_csv_to_shp,
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hillshade)
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import os
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class ImageSplitterParallel(QRunnable):
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def __init__(self, i, crs, im, transform ,temp_folder):
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super().__init__()
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self.i = i
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self.n_ = i
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self.crs = crs
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self.im = im
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self.transform = transform
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self.temp_folder = temp_folder
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def run(self):
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import rasterio
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import os
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n_ = str(self.n_ ).zfill(5) +'.tiff'
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Z = self.im
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new_dataset = rasterio.open(
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os.path.normpath(rf'{self.temp_folder}\{n_}'),
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'w',
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driver='GTiff',
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height=Z.shape[0],
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width=Z.shape[1],
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count=1,
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dtype=Z.dtype,
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crs=self.crs,
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transform=self.transform,
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)
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new_dataset.write(Z, 1)
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new_dataset.close()
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class MainWindow(QMainWindow):
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def __init__(self):
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super().__init__()
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self.threadpool = QThreadPool.globalInstance()
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self.setWindowTitle("Lineamentor - Lineament Extractor form large DEM")
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# self.setGeometry(100, 100, 800, 600)
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self.mainWidget = QWidget()
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self.mainLayout = QHBoxLayout(self.mainWidget)
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self.dem = None
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self.setCentralWidget(self.mainWidget)
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self.initLayout()
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self.addFunctions()
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def addFunctions(self):
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self.openImageButton.clicked.connect(self.openFileAction)
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self.subsetSideSlider.valueChanged.connect(self.gridUpdateAction)
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self.resetButton.clicked.connect(self.resetAction)
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self.previewRegen.clicked.connect(self.previewRegenActionAndSmallCalc)
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self.extractButon.clicked.connect(self.extractLineamentAction)
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self.previewImageOverlaySelector.currentIndexChanged.connect(self.previewRegenAction)
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self.previewRegionSelector.currentIndexChanged.connect(self.previewRegenAction)
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self.hillshadeAngleSelector.currentIndexChanged.connect(self.previewRegenAction)
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self.previewRegionPointCheckbox.stateChanged.connect(self.previewRegenAction)
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self.previewRegionLineDenseCheckbox.stateChanged.connect(self.previewRegenAction)
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self.previewRegionLineCleanCheckbox.stateChanged.connect(self.previewRegenAction)
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def initLayout(self):
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middleSplitter = QSplitter()
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self.mainLayout.addWidget(middleSplitter)
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leftWidget = QWidget()
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rightWidget = QWidget()
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previewBigWidget = QWidget()
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previewSmallWidget = QWidget()
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leftLayout = QVBoxLayout(leftWidget)
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rightLayout = QVBoxLayout(rightWidget)
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righTab = QTabWidget()
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previewBigLayout = QVBoxLayout(previewBigWidget)
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previewSmallLayout = QVBoxLayout(previewSmallWidget)
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middleSplitter.addWidget(leftWidget)
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middleSplitter.addWidget(rightWidget)
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rightLayout.addWidget(righTab)
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righTab.addTab(previewBigWidget, 'overview', )
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righTab.addTab(previewSmallWidget, 'extraction preview', )
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# rightLayout.addLayout()
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self.openImageButton = QPushButton('open image')
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self.keepIntermediateCheckbox = QCheckBox()
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keepIntermediatelayout = QHBoxLayout()
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keepIntermediatelayout.addWidget(self.keepIntermediateCheckbox)
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keepIntermediatelayout.addWidget(QLabel('keep intermediate file'))
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self.resetButton = QPushButton('Reset to Default')
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self.previewRegen = QPushButton('Regenerate Preview')
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self.extractButon = QPushButton('Extract Lineament')
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self.subsetSideSlider, subsetSideLabel, subsetSideLayout = self.add_slider("Image Subset size", 500, 100, 2000, 50)
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self.downsampleSlider, downsampleLabel, downsampleLayout = self.add_slider("Downsample Factor", 1, 1, 20, 0.1)
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self.hillshadeZSlider, hillshadeZLabel, hillshadeZLayout = self.add_slider("Hillshade Z", 0, -5, 5, 1,log=True)
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self.epsSlider, epsLabel, epsLayout = self.add_slider("Eps", 1.2, 0.2, 4, 0.1)
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self.threshSlider, threshLabel, threshLayout = self.add_slider("Thresh", 40, 10, 200, 1)
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self.minDistSlider, minDistLabel, minDistLayout = self.add_slider("Min Dist", 10, 2, 100, 1)
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self.segLenSlider, segLenLabel, segLenLayout = self.add_slider("Seg Len", 10, 2, 100, 1)
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self.sliders = [self.subsetSideSlider, self.downsampleSlider,
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self.hillshadeZSlider, self.epsSlider, self.threshSlider,
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self.minDistSlider, self.segLenSlider, ]
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self.previewImageOverlaySelector = QComboBox()
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self.previewImageOverlaySelector.addItems(['orginial image',
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'Downscaled image',
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'Prewitt Filters',
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'Prewitt Filters Cutoff',
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'Hillshade',
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])
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self.previewRegionSelector = QComboBox()
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self.previewRegionSelector.addItems(['0'])
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self.hillshadeAngleSelector = QComboBox()
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n = 16
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d = 360/n
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for i in range(0, n):
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deg1 = i*d
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deg2 = deg1 + d
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self.hillshadeAngleSelector.addItem(f'{deg1} - {deg2}')
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previewSmallMenuWidget = QWidget()
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previewSmallMenuWidget.setFixedHeight(120)
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previewSmallMenuLayout = QHBoxLayout(previewSmallMenuWidget)
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previewSmallLayout.addWidget(previewSmallMenuWidget)
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col1previewSmallMenuLayout = QVBoxLayout()
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col2previewSmallMenuLayout = QVBoxLayout()
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col3previewSmallMenuLayout = QVBoxLayout()
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previewSmallMenuLayout.addLayout(col1previewSmallMenuLayout)
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previewSmallMenuLayout.addLayout(col2previewSmallMenuLayout)
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previewSmallMenuLayout.addLayout(col3previewSmallMenuLayout)
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previewSmallMenuLayout.addStretch()
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def createLabelCheckbox(labelText:str):
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label = QLabel(f'{labelText}')
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checkbox = QCheckBox()
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layout = QHBoxLayout()
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layout.addWidget(checkbox)
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layout.addWidget(label)
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return checkbox, layout
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self.previewRegionPointCheckbox, previewRegionPointLayout = createLabelCheckbox('Show/hide Extracted Point Features')
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self.previewRegionLineDenseCheckbox, previewRegionLineDenseLayout = createLabelCheckbox('Show/hide Generate Lines Features')
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self.previewRegionLineCleanCheckbox, previewRegionLineCleanLayout = createLabelCheckbox('Show/hide Aggregated Lines Features')
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self.previewRegionPointCheckbox.setChecked(False)
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self.previewRegionLineDenseCheckbox.setChecked(False)
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self.previewRegionLineCleanCheckbox.setChecked(True)
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# col1previewSmallMenuLayout.addWidget()
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col1previewSmallMenuLayout.addWidget(QLabel('Preview Region Selector:'))
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col1previewSmallMenuLayout.addWidget(self.previewRegionSelector)
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col1previewSmallMenuLayout.addWidget(QLabel('Hillshade Angle Selector:'))
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col1previewSmallMenuLayout.addWidget(self.hillshadeAngleSelector)
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col2previewSmallMenuLayout.addStretch()
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col2previewSmallMenuLayout.addWidget(QLabel('Preview Image overlay:'))
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col2previewSmallMenuLayout.addWidget(self.previewImageOverlaySelector)
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col2previewSmallMenuLayout.addLayout(previewRegionPointLayout)
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col2previewSmallMenuLayout.addLayout(previewRegionLineDenseLayout)
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col2previewSmallMenuLayout.addLayout(previewRegionLineCleanLayout)
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col3previewSmallMenuLayout.addStretch()
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col3previewSmallMenuLayout.addWidget(self.previewRegen)
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leftLayout.addWidget(self.openImageButton)
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leftLayout.addLayout(keepIntermediatelayout)
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leftLayout.addLayout(subsetSideLayout)
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leftLayout.addLayout(downsampleLayout)
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leftLayout.addLayout(hillshadeZLayout)
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leftLayout.addLayout(epsLayout)
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leftLayout.addLayout(threshLayout)
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leftLayout.addLayout(minDistLayout)
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leftLayout.addLayout(segLenLayout)
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leftLayout.addWidget(self.resetButton)
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# leftLayout.addWidget(self.previewRegen)
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leftLayout.addStretch()
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leftLayout.addWidget(self.extractButon)
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self.previewBigImg = pg.plot()
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self.previewBigImg.setAspectLocked(True)
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previewBigLayout.addWidget(self.previewBigImg)
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self.previewSmallImg = pg.plot()
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self.previewSmallImg.setAspectLocked(True)
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previewSmallLayout.addWidget(self.previewSmallImg)
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def loadImageAndPreview(self):
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sz = self.subsetSideSlider.value() * self.subsetSideSlider.step
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self.regions, self.dem, self.extent, self.crs_espg = read_raster(self.file_name, split_size=sz)
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L,R,B,T = self.extent
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if (L == 0) & (T==0):
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L,R,T,B = self.extent
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W, H = abs(L-R), abs(B-T)
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img = pg.ImageItem(self.dem[::-1].T)
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img.setRect(L,B,W,H)
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self.previewBigImg.clear()
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self.previewBigImg.addItem(img)
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xarr = []
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yarr = []
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for l,b,r,t in self.regions.values[:,-4:]:
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xarr = xarr + [l, r, r, l, l]
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yarr = yarr + [t, t, b, b, t]
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xarr = np.array(xarr)
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yarr = np.array(yarr)
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conn = np.ones_like(xarr,dtype=bool)
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conn[4::5] = 0
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girdArr = pg.arrayToQPath(xarr, yarr, connect=conn)
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self.girditem = pg.QtWidgets.QGraphicsPathItem(girdArr)
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self.girditem.setPen(pg.mkPen('y', width=1))
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self.previewBigImg.addItem(self.girditem)
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self.tx_plot_collection = []
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for num, (l,b,r,t) in enumerate(self.regions.values[:,-4:]):
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tx = pg.TextItem(str(num).zfill(5), color='yellow',anchor=(0.5,0.5))
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tx.setPos((l+r)/2, (t+b)/2)
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self.tx_plot_collection.append(tx)
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self.previewBigImg.addItem(tx)
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self.previewBigImg.enableAutoRange()
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self.previewRegionSelector.clear()
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+
self.previewRegionSelector.addItems([str(n).zfill(5) for n in range(len(self.regions))])
|
|
317
|
+
|
|
318
|
+
self.previewRegenAction()
|
|
319
|
+
|
|
320
|
+
|
|
321
|
+
def gridUpdateAction(self):
|
|
322
|
+
|
|
323
|
+
sz = self.subsetSideSlider.value() * self.subsetSideSlider.step
|
|
324
|
+
|
|
325
|
+
shape = self.dem.shape
|
|
326
|
+
left, bottom, right, top = self.extent[0], self.extent[2], self.extent[1], self.extent[3]
|
|
327
|
+
resX = (right-left)/self.dem.shape[1]
|
|
328
|
+
resY = (top-bottom)/self.dem.shape[0]
|
|
329
|
+
|
|
330
|
+
|
|
331
|
+
v_split = np.c_[np.arange(0, shape[0]-sz, sz), np.arange(0, shape[0]-sz, sz)+sz]
|
|
332
|
+
v_split = np.vstack([v_split, [v_split[-1,-1],shape[0]]])
|
|
333
|
+
|
|
334
|
+
|
|
335
|
+
h_split = np.c_[np.arange(0, shape[1]-sz, sz), np.arange(0, shape[1]-sz, sz)+sz]
|
|
336
|
+
h_split = np.vstack([h_split, [h_split[-1,-1],shape[1]]])
|
|
337
|
+
|
|
338
|
+
xx, yy = np.meshgrid(np.arange(len(v_split)), np.arange(len(h_split)))
|
|
339
|
+
xx, yy = xx.flatten(), yy.flatten()
|
|
340
|
+
|
|
341
|
+
grids = np.c_[ h_split[yy], v_split[xx],]
|
|
342
|
+
'''grid format: [[L, R, B, T]] '''
|
|
343
|
+
|
|
344
|
+
ns = np.arange(len(grids))
|
|
345
|
+
lefts = [left]*len(grids)
|
|
346
|
+
tops = [top]*len(grids)
|
|
347
|
+
resXs = [resX]*len(grids)
|
|
348
|
+
resYs = [resY]*len(grids)
|
|
349
|
+
szs = [sz]*len(grids)
|
|
350
|
+
|
|
351
|
+
self.regions = pd.DataFrame(zip(ns, lefts, tops, resXs, resYs, szs), columns=['ns', 'lefts', 'tops', 'resXs', 'resYs', 'szs'])
|
|
352
|
+
|
|
353
|
+
self.regions[['L', 'R', 'B', 'T']] = grids
|
|
354
|
+
|
|
355
|
+
self.regions['left_bound'] = self.regions['lefts'] + self.regions['L']*self.regions['resXs']
|
|
356
|
+
self.regions['bottom_bound'] = self.regions['tops'] - self.regions['T']*self.regions['resYs']
|
|
357
|
+
self.regions['right_bound'] = self.regions['left_bound'] + abs(self.regions['L'] - self.regions['R'])*self.regions['resXs']
|
|
358
|
+
self.regions['top_bound'] = self.regions['bottom_bound'] + abs(self.regions['T'] - self.regions['B'])*self.regions['resYs']
|
|
359
|
+
|
|
360
|
+
xarr = []
|
|
361
|
+
yarr = []
|
|
362
|
+
|
|
363
|
+
|
|
364
|
+
for tx in self.tx_plot_collection:
|
|
365
|
+
tx.setText('')
|
|
366
|
+
|
|
367
|
+
for num, (l,b,r,t) in enumerate(self.regions.values[:,-4:]):
|
|
368
|
+
xarr = xarr + [l, r, r, l, l]
|
|
369
|
+
yarr = yarr + [t, t, b, b, t]
|
|
370
|
+
|
|
371
|
+
if num<len(self.tx_plot_collection):
|
|
372
|
+
tx = self.tx_plot_collection[num]
|
|
373
|
+
tx.setText(str(num).zfill(5))
|
|
374
|
+
tx.setPos((l+r)/2, (t+b)/2)
|
|
375
|
+
|
|
376
|
+
else:
|
|
377
|
+
tx = pg.TextItem(str(num).zfill(5), color='yellow',anchor=(0.5,0.5))
|
|
378
|
+
tx.setPos((l+r)/2, (t+b)/2)
|
|
379
|
+
self.previewBigImg.addItem(tx)
|
|
380
|
+
self.tx_plot_collection.append(tx)
|
|
381
|
+
|
|
382
|
+
# tx = pg.TextItem(str(num).zfill(5), color='yellow',anchor=(0.5,0.5))
|
|
383
|
+
# tx.setPos((l+r)/2, (t+b)/2)
|
|
384
|
+
# tx.setAnchor
|
|
385
|
+
xarr = np.array(xarr)
|
|
386
|
+
yarr = np.array(yarr)
|
|
387
|
+
conn = np.ones_like(xarr,dtype=bool)
|
|
388
|
+
|
|
389
|
+
conn[4::5] = 0
|
|
390
|
+
|
|
391
|
+
p = pg.arrayToQPath(xarr, yarr, connect=conn)
|
|
392
|
+
|
|
393
|
+
self.girditem.setPath(p)
|
|
394
|
+
|
|
395
|
+
self.previewRegionSelector.clear()
|
|
396
|
+
self.previewRegionSelector.addItems([str(n).zfill(5) for n in range(len(self.regions))])
|
|
397
|
+
|
|
398
|
+
|
|
399
|
+
def openFileAction(self):
|
|
400
|
+
options = QFileDialog.Options()
|
|
401
|
+
self.file_name, _ = QFileDialog.getOpenFileName(self, "Open File", "", "Georeferenced image (*.tif);;Georeferenced image (*.tiff);;Non Georef image (*.jpeg);;Non Georef image (*.jpg)", options=options)
|
|
402
|
+
if self.file_name:
|
|
403
|
+
self.loadImageAndPreview()
|
|
404
|
+
|
|
405
|
+
|
|
406
|
+
def resetAction(self):
|
|
407
|
+
|
|
408
|
+
self.keepIntermediateCheckbox.setChecked(False)
|
|
409
|
+
for it in self.sliders:
|
|
410
|
+
it.setValue(int(it.default / it.step))
|
|
411
|
+
|
|
412
|
+
|
|
413
|
+
def previewRegenActionAndSmallCalc(self):
|
|
414
|
+
self.smallCalc()
|
|
415
|
+
self.previewRegenAction()
|
|
416
|
+
|
|
417
|
+
|
|
418
|
+
def previewRegenAction(self):
|
|
419
|
+
self.previewSmallImg.clear()
|
|
420
|
+
self.getImageSubset()
|
|
421
|
+
|
|
422
|
+
|
|
423
|
+
overlay = self.previewImageOverlaySelector.currentText()
|
|
424
|
+
hs = self.hillshadeAngleSelector.currentText()
|
|
425
|
+
hs = hs.replace(' ', '').split('-')
|
|
426
|
+
avgAng = (float(hs[0]) + float(hs[1])) /2
|
|
427
|
+
|
|
428
|
+
|
|
429
|
+
if overlay == 'original image':
|
|
430
|
+
img = self.demSubset
|
|
431
|
+
|
|
432
|
+
elif overlay == 'Prewitt Filters':
|
|
433
|
+
img = self.im_prewitt
|
|
434
|
+
|
|
435
|
+
elif overlay == 'Prewitt Filters Cutoff':
|
|
436
|
+
img = self.im_prewitt_clip
|
|
437
|
+
|
|
438
|
+
elif overlay == 'Hillshade':
|
|
439
|
+
z_multip = round(10**(self.hillshadeZSlider.value() * self.hillshadeZSlider.step),5)
|
|
440
|
+
img = hillshade(self.demSubset, azimuth=avgAng, z_multip=z_multip)
|
|
441
|
+
|
|
442
|
+
else:
|
|
443
|
+
img = self.demSubset
|
|
444
|
+
|
|
445
|
+
subImg = pg.ImageItem(img.T[:,::-1])
|
|
446
|
+
self.previewSmallImg.addItem(subImg)
|
|
447
|
+
|
|
448
|
+
showPoints = self.previewRegionPointCheckbox.checkState() > 0
|
|
449
|
+
showLine = self.previewRegionLineDenseCheckbox.checkState() > 0
|
|
450
|
+
showcleanLine = self.previewRegionLineCleanCheckbox.checkState() > 0
|
|
451
|
+
|
|
452
|
+
c = [(202, 174, 209),
|
|
453
|
+
(203, 51, 10),
|
|
454
|
+
(62, 145, 52),
|
|
455
|
+
(187, 97, 69),
|
|
456
|
+
(148, 46, 4),
|
|
457
|
+
(63, 117, 56),
|
|
458
|
+
(68, 204, 91),
|
|
459
|
+
(5, 55, 99),
|
|
460
|
+
(16, 21, 21),
|
|
461
|
+
(39, 107, 151),
|
|
462
|
+
(202, 174, 209),
|
|
463
|
+
(203, 51, 10),
|
|
464
|
+
(62, 145, 52),
|
|
465
|
+
(187, 97, 69),
|
|
466
|
+
(148, 46, 4),
|
|
467
|
+
(63, 117, 56),
|
|
468
|
+
(68, 204, 91),
|
|
469
|
+
(5, 55, 99),
|
|
470
|
+
(16, 21, 21),
|
|
471
|
+
(39, 107, 151)]
|
|
472
|
+
|
|
473
|
+
|
|
474
|
+
if showPoints:
|
|
475
|
+
for num, df in enumerate(self.container):
|
|
476
|
+
p = pg.ScatterPlotItem(df['X'], img.shape[0]-df['Y'],
|
|
477
|
+
pen = None,
|
|
478
|
+
brush=c[num],
|
|
479
|
+
symbol ='o',
|
|
480
|
+
size = 5,
|
|
481
|
+
name =f'quadrant: {num}')
|
|
482
|
+
p.setBrush(c[num])
|
|
483
|
+
p.setPen(None)
|
|
484
|
+
|
|
485
|
+
self.previewSmallImg.addItem(p)
|
|
486
|
+
|
|
487
|
+
if showLine:
|
|
488
|
+
self.line_all = pg.QtWidgets.QGraphicsPathItem()
|
|
489
|
+
self.line_all.setPen(pg.mkPen('r', width=3))
|
|
490
|
+
|
|
491
|
+
lines_ = self.lines[['min_x', 'max_x', 'min_y', 'max_y']].values
|
|
492
|
+
xarr_line = np.ones(len(lines_)*2)
|
|
493
|
+
yarr_line = np.ones(len(lines_)*2)
|
|
494
|
+
conn_line = np.ones(len(lines_)*2)
|
|
495
|
+
xarr_line[::2] = lines_[:,0]
|
|
496
|
+
xarr_line[1::2] = lines_[:,1]
|
|
497
|
+
yarr_line[::2] = lines_[:,2]
|
|
498
|
+
yarr_line[1::2] = lines_[:,3]
|
|
499
|
+
conn_line[1::2] = 0
|
|
500
|
+
line_plot = pg.arrayToQPath(xarr_line, img.shape[0]-yarr_line, connect=conn_line)
|
|
501
|
+
self.line_all.setPath(line_plot)
|
|
502
|
+
self.previewSmallImg.addItem(self.line_all)
|
|
503
|
+
|
|
504
|
+
if showcleanLine:
|
|
505
|
+
|
|
506
|
+
self.line_all_sieve = pg.QtWidgets.QGraphicsPathItem()
|
|
507
|
+
self.line_all_sieve.setPen(pg.mkPen('b', width=3))
|
|
508
|
+
|
|
509
|
+
lines_ = self.broken_lines[['min_x', 'max_x', 'min_y', 'max_y']].values
|
|
510
|
+
xarr_line = np.ones(len(lines_)*2)
|
|
511
|
+
yarr_line = np.ones(len(lines_)*2)
|
|
512
|
+
conn_line = np.ones(len(lines_)*2)
|
|
513
|
+
xarr_line[::2] = lines_[:,0]
|
|
514
|
+
xarr_line[1::2] = lines_[:,1]
|
|
515
|
+
yarr_line[::2] = lines_[:,2]
|
|
516
|
+
yarr_line[1::2] = lines_[:,3]
|
|
517
|
+
conn_line[1::2] = 0
|
|
518
|
+
line_plot = pg.arrayToQPath(xarr_line, img.shape[0]-yarr_line, connect=conn_line)
|
|
519
|
+
self.line_all_sieve.setPath(line_plot)
|
|
520
|
+
self.previewSmallImg.addItem(self.line_all_sieve)
|
|
521
|
+
|
|
522
|
+
self.previewSmallImg.enableAutoRange()
|
|
523
|
+
|
|
524
|
+
|
|
525
|
+
def getImageSubset(self):
|
|
526
|
+
|
|
527
|
+
sz = self.subsetSideSlider.value() * self.subsetSideSlider.step
|
|
528
|
+
z_multip = round(10**(self.hillshadeZSlider.value() * self.hillshadeZSlider.step),5)
|
|
529
|
+
eps = self.epsSlider.value() * self.epsSlider.step
|
|
530
|
+
thresh = self.threshSlider.value() * self.threshSlider.step
|
|
531
|
+
min_dist = self.minDistSlider.value() * self.minDistSlider.step
|
|
532
|
+
seg_len = self.segLenSlider.value() * self.segLenSlider.step
|
|
533
|
+
downsacale = self.downsampleSlider.value() * self.downsampleSlider.step
|
|
534
|
+
|
|
535
|
+
selected_region = int(self.previewRegionSelector.currentText())
|
|
536
|
+
curr = self.regions[self.regions['ns'] == selected_region]
|
|
537
|
+
|
|
538
|
+
curr = self.regions.iloc[selected_region]
|
|
539
|
+
|
|
540
|
+
L, R, B, T = int(curr['L']), int(curr['R']), int(curr['B']), int(curr['T'])
|
|
541
|
+
|
|
542
|
+
dem = self.dem[B:T, L:R]
|
|
543
|
+
self.demSubsetOrig = dem.copy()
|
|
544
|
+
dem_min, dem_max = dem.min(), dem.max()
|
|
545
|
+
dem = rescale(dem, 1/downsacale, anti_aliasing=False)
|
|
546
|
+
dem2_min, dem2_max = dem.min(), dem.max()
|
|
547
|
+
dem = (dem - dem2_min)/(dem2_max - dem2_min)
|
|
548
|
+
dem = dem_min + dem*(dem_max-dem_min)
|
|
549
|
+
self.demSubset = dem.copy()
|
|
550
|
+
|
|
551
|
+
|
|
552
|
+
def smallCalc(self):
|
|
553
|
+
|
|
554
|
+
sz = self.subsetSideSlider.value() * self.subsetSideSlider.step
|
|
555
|
+
z_multip = round(10**(self.hillshadeZSlider.value() * self.hillshadeZSlider.step),5)
|
|
556
|
+
eps = self.epsSlider.value() * self.epsSlider.step
|
|
557
|
+
thresh = self.threshSlider.value() * self.threshSlider.step
|
|
558
|
+
min_dist = self.minDistSlider.value() * self.minDistSlider.step
|
|
559
|
+
seg_len = self.segLenSlider.value() * self.segLenSlider.step
|
|
560
|
+
downsacale = self.downsampleSlider.value() * self.downsampleSlider.step
|
|
561
|
+
|
|
562
|
+
selected_region = int(self.previewRegionSelector.currentText())
|
|
563
|
+
curr = self.regions[self.regions['ns'] == selected_region]
|
|
564
|
+
|
|
565
|
+
curr = self.regions.iloc[selected_region]
|
|
566
|
+
|
|
567
|
+
L, R, B, T = int(curr['L']), int(curr['R']), int(curr['B']), int(curr['T'])
|
|
568
|
+
|
|
569
|
+
# dem = self.dem[B:T, L:R]
|
|
570
|
+
self.getImageSubset()
|
|
571
|
+
|
|
572
|
+
|
|
573
|
+
extent = [0, self.demSubset.shape[1], self.demSubset.shape[0],0]
|
|
574
|
+
|
|
575
|
+
self.container, self.im_prewitt, self.im_prewitt_clip =extract_lineament_points(self.demSubset,
|
|
576
|
+
eps=eps,
|
|
577
|
+
thresh=thresh,
|
|
578
|
+
z_multip=z_multip)
|
|
579
|
+
self.lines = convert_points_to_line(self.container)
|
|
580
|
+
|
|
581
|
+
_,_, self.broken_lines = reduce_lines(self.lines, extent,
|
|
582
|
+
self.demSubset.shape,
|
|
583
|
+
min_dist=min_dist,
|
|
584
|
+
seg_len=seg_len)
|
|
585
|
+
|
|
586
|
+
|
|
587
|
+
def add_slider(self, name, default, min_val, max_val, step, log=False):
|
|
588
|
+
|
|
589
|
+
if log:
|
|
590
|
+
label = QLabel(f"{name}: {10**default}")
|
|
591
|
+
else:
|
|
592
|
+
label = QLabel(f"{name}: {default}")
|
|
593
|
+
|
|
594
|
+
slider = QSlider(Qt.Horizontal)
|
|
595
|
+
slider.setMinimum(int(min_val / step))
|
|
596
|
+
slider.setMaximum(int(max_val / step))
|
|
597
|
+
slider.setValue(int(default / step))
|
|
598
|
+
slider.setTickInterval(1)
|
|
599
|
+
slider.setSingleStep(1)
|
|
600
|
+
slider.step = step
|
|
601
|
+
slider.min_val = min_val
|
|
602
|
+
slider.max_val = max_val
|
|
603
|
+
slider.name = name
|
|
604
|
+
slider.default = default
|
|
605
|
+
|
|
606
|
+
|
|
607
|
+
if log:
|
|
608
|
+
slider.valueChanged.connect(lambda value: label.setText(f"{name}: {10**(value * step)}"))
|
|
609
|
+
|
|
610
|
+
else:
|
|
611
|
+
if type(step) == int:
|
|
612
|
+
slider.valueChanged.connect(lambda value: label.setText(f"{name}: {value * step} "))
|
|
613
|
+
else:
|
|
614
|
+
slider.valueChanged.connect(lambda value: label.setText(f"{name}: {round((value * step), 3)} "))
|
|
615
|
+
|
|
616
|
+
layout = QVBoxLayout()
|
|
617
|
+
layout.addWidget(label)
|
|
618
|
+
layout.addWidget(slider)
|
|
619
|
+
|
|
620
|
+
return slider, label, layout
|
|
621
|
+
|
|
622
|
+
|
|
623
|
+
def extractLineamentAction(self):
|
|
624
|
+
import glob
|
|
625
|
+
import rasterio
|
|
626
|
+
|
|
627
|
+
options = QFileDialog.Options()
|
|
628
|
+
shp_path, _ = QFileDialog.getSaveFileName(self, "Shapefile Name", "", "Shapefile (*.shp);", options=options)
|
|
629
|
+
shp_name = os.path.split(shp_path)[-1]
|
|
630
|
+
n = shp_name.split('.')[0]
|
|
631
|
+
temp_folder = os.path.normpath(shp_path.replace(shp_name,'')+ f'\\{n}')
|
|
632
|
+
|
|
633
|
+
im_path = os.path.normpath(self.file_name)
|
|
634
|
+
|
|
635
|
+
sz = self.subsetSideSlider.value() * self.subsetSideSlider.step
|
|
636
|
+
z_multip = round(10**(self.hillshadeZSlider.value() * self.hillshadeZSlider.step),5)
|
|
637
|
+
eps = self.epsSlider.value() * self.epsSlider.step
|
|
638
|
+
thresh = self.threshSlider.value() * self.threshSlider.step
|
|
639
|
+
min_dist = self.minDistSlider.value() * self.minDistSlider.step
|
|
640
|
+
seg_len = self.segLenSlider.value() * self.segLenSlider.step
|
|
641
|
+
downscale = self.downsampleSlider.value() * self.downsampleSlider.step
|
|
642
|
+
|
|
643
|
+
keep_intermediate_file = self.keepIntermediateCheckbox.checkState() > 0
|
|
644
|
+
|
|
645
|
+
|
|
646
|
+
if os.path.isdir(temp_folder):
|
|
647
|
+
'delete content'
|
|
648
|
+
files = glob.glob(f'{temp_folder}/*')
|
|
649
|
+
for f in files:
|
|
650
|
+
os.remove(f)
|
|
651
|
+
else:
|
|
652
|
+
'create new folder'
|
|
653
|
+
os.mkdir(temp_folder)
|
|
654
|
+
|
|
655
|
+
|
|
656
|
+
''' IMAGE SPLITTING SEQUENCES - START'''
|
|
657
|
+
#==================================================================================================
|
|
658
|
+
dataset = rasterio.open(im_path)
|
|
659
|
+
im = dataset.read(1)
|
|
660
|
+
shape = im.shape
|
|
661
|
+
left, bottom, right, top = list(dataset.bounds)
|
|
662
|
+
resX = (right-left)/im.shape[1]
|
|
663
|
+
resY = (top-bottom)/im.shape[0]
|
|
664
|
+
|
|
665
|
+
if shape[0]<sz:
|
|
666
|
+
v_split = np.array([[0, shape[0]]])
|
|
667
|
+
else:
|
|
668
|
+
v_split = np.c_[np.arange(0, shape[0]-sz, sz), np.arange(0, shape[0]-sz, sz)+sz]
|
|
669
|
+
v_split = np.vstack([v_split, [v_split[-1,-1],shape[0]]])
|
|
670
|
+
|
|
671
|
+
if shape[1]<sz:
|
|
672
|
+
h_split = np.array([[0, shape[1]]])
|
|
673
|
+
else:
|
|
674
|
+
h_split = np.c_[np.arange(0, shape[1]-sz, sz), np.arange(0, shape[1]-sz, sz)+sz]
|
|
675
|
+
h_split = np.vstack([h_split, [h_split[-1,-1],shape[1]]])
|
|
676
|
+
|
|
677
|
+
|
|
678
|
+
xx, yy = np.meshgrid(np.arange(len(v_split)), np.arange(len(h_split)))
|
|
679
|
+
xx, yy = xx.flatten(), yy.flatten()
|
|
680
|
+
|
|
681
|
+
grids = np.c_[ h_split[yy], v_split[xx],]
|
|
682
|
+
#==================================================================================================
|
|
683
|
+
|
|
684
|
+
'''grid format: [[L, R, B, T]] '''
|
|
685
|
+
|
|
686
|
+
|
|
687
|
+
ns = np.arange(len(grids))
|
|
688
|
+
target_folders = [temp_folder]*len(grids)
|
|
689
|
+
lefts = [left]*len(grids)
|
|
690
|
+
tops = [top]*len(grids)
|
|
691
|
+
resXs = [resX]*len(grids)
|
|
692
|
+
resYs = [resY]*len(grids)
|
|
693
|
+
szs = [sz]*len(grids)
|
|
694
|
+
|
|
695
|
+
df = pd.DataFrame(zip(ns, target_folders, lefts, tops, resXs, resYs, szs), columns=['ns', 'target_folders', 'lefts', 'tops', 'resXs', 'resYs', 'szs'])
|
|
696
|
+
|
|
697
|
+
df[['L', 'R', 'B', 'T']] = grids
|
|
698
|
+
|
|
699
|
+
transforms = []
|
|
700
|
+
ims = []
|
|
701
|
+
|
|
702
|
+
for n, tempfolder, left, top, resX, resY, sz, L, R, B, T in df.values:
|
|
703
|
+
l = left + L*resX
|
|
704
|
+
# b = top - T*resY - sz*resY
|
|
705
|
+
b = top + T*resY
|
|
706
|
+
|
|
707
|
+
transform = rasterio.Affine.translation(l - resX / 2, b + resY / 2) * rasterio.Affine.scale(resX, resY)
|
|
708
|
+
Z = im[B:T, L:R].astype('float')
|
|
709
|
+
|
|
710
|
+
transforms.append(transform)
|
|
711
|
+
ims.append(Z)
|
|
712
|
+
|
|
713
|
+
crs = dataset.crs
|
|
714
|
+
self.df = df
|
|
715
|
+
|
|
716
|
+
|
|
717
|
+
|
|
718
|
+
cases = zip(np.arange(len(df)),
|
|
719
|
+
[crs]*len(df),
|
|
720
|
+
ims,
|
|
721
|
+
transforms,
|
|
722
|
+
[temp_folder]*len(df))
|
|
723
|
+
for n_, crs, im, transform, temp_folder in cases:
|
|
724
|
+
worker = ImageSplitterParallel(n_, crs, im, transform, temp_folder)
|
|
725
|
+
self.threadpool.start(worker)
|
|
726
|
+
|
|
727
|
+
print(''' IMAGE SPLITTING SEQUENCES - END''' )
|
|
728
|
+
|
|
729
|
+
self.threadpool.waitForDone()
|
|
730
|
+
|
|
731
|
+
|
|
732
|
+
flist = glob.glob(f'{temp_folder}/*.tiff')
|
|
733
|
+
cases = pd.DataFrame(zip(flist,
|
|
734
|
+
[temp_folder]*len(flist),
|
|
735
|
+
[eps]*len(flist),
|
|
736
|
+
[thresh]*len(flist),
|
|
737
|
+
[min_dist]*len(flist),
|
|
738
|
+
[seg_len]*len(flist),
|
|
739
|
+
[z_multip]*len(flist),
|
|
740
|
+
[downscale]*len(flist))).values
|
|
741
|
+
|
|
742
|
+
from joblib import Parallel, delayed
|
|
743
|
+
Parallel(n_jobs=-1)(delayed(dem_to_line)(*c) for c in cases)
|
|
744
|
+
|
|
745
|
+
df = merge_lines_csv_to_shp(tempfolder=temp_folder,
|
|
746
|
+
shppath=shp_path,
|
|
747
|
+
save_to_file=True)
|
|
748
|
+
|
|
749
|
+
|
|
750
|
+
if keep_intermediate_file == False:
|
|
751
|
+
|
|
752
|
+
if os.path.isdir(tempfolder):
|
|
753
|
+
'delete content'
|
|
754
|
+
files = glob.glob(f'{tempfolder}/*')
|
|
755
|
+
for f in files:
|
|
756
|
+
os.remove(f)
|
|
757
|
+
os.removedirs(tempfolder)
|
|
758
|
+
|
|
759
|
+
|
|
760
|
+
|
|
761
|
+
if __name__ == "__main__":
|
|
762
|
+
app = QApplication(sys.argv)
|
|
763
|
+
window = MainWindow()
|
|
764
|
+
window.show()
|
|
765
|
+
sys.exit(app.exec_())
|
|
766
|
+
|