pylinac 0.6.0.1__zip → 0.7.1__zip

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (38) hide show
  1. {pylinac-0.6.0.1 → pylinac-0.7.1}/MANIFEST.in +0 -0
  2. {pylinac-0.6.0.1 → pylinac-0.7.1}/PKG-INFO +1 -1
  3. {pylinac-0.6.0.1 → pylinac-0.7.1}/README.rst +14 -7
  4. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/__init__.py +2 -2
  5. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/cbct.py +640 -497
  6. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/__init__.py +0 -0
  7. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/common_functions.py +0 -0
  8. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/decorators.py +1 -18
  9. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/geometry.py +25 -57
  10. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/image.py +50 -41
  11. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/io.py +0 -0
  12. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/profile.py +45 -5
  13. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/core/utilities.py +0 -10
  14. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/cbct/High quality head.zip +0 -0
  15. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/flatsym/flatsym_demo.dcm +0 -0
  16. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/log_reader/AQA.dlg +0 -0
  17. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/log_reader/BQA.dlg +0 -0
  18. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/log_reader/Tlog.bin +0 -0
  19. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/log_reader/Tlog2.bin +0 -0
  20. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/picket_fence/EPID-PF-LR.dcm +0 -0
  21. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/starshot/10X_collimator.tif +0 -0
  22. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/vmat/DRGS_dmlc.dcm +0 -0
  23. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/vmat/DRGS_open.dcm +0 -0
  24. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/vmat/DRMLC_dmlc.dcm +0 -0
  25. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/demo_files/vmat/DRMLC_open.dcm +0 -0
  26. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/flatsym.py +3 -17
  27. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/log_analyzer.py +267 -124
  28. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/picketfence.py +69 -42
  29. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/starshot.py +277 -256
  30. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac/vmat.py +213 -103
  31. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac.egg-info/PKG-INFO +1 -1
  32. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac.egg-info/SOURCES.txt +0 -0
  33. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac.egg-info/dependency_links.txt +0 -0
  34. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac.egg-info/not-zip-safe +0 -0
  35. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac.egg-info/requires.txt +1 -1
  36. {pylinac-0.6.0.1 → pylinac-0.7.1}/pylinac.egg-info/top_level.txt +0 -0
  37. {pylinac-0.6.0.1 → pylinac-0.7.1}/setup.cfg +1 -1
  38. {pylinac-0.6.0.1 → pylinac-0.7.1}/setup.py +51 -49
File without changes
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 1.1
2
2
  Name: pylinac
3
- Version: 0.6.0.1
3
+ Version: 0.7.1
4
4
  Summary: A toolkit for performing TG-142 QA-related tasks on a linear accelerator
5
5
  Home-page: https://github.com/jrkerns/pylinac
6
6
  Author: James Kerns
@@ -1,10 +1,17 @@
1
1
  Pylinac
2
2
  =======
3
3
 
4
+ .. image:: https://badges.gitter.im/Join%20Chat.svg
5
+ :alt: Join the chat at https://gitter.im/jrkerns/pylinac
6
+ :target: https://gitter.im/jrkerns/pylinac?utm_source=badge&utm_medium=badge&utm_campaign=pr-badge&utm_content=badge
7
+
4
8
  .. image:: https://img.shields.io/pypi/v/pylinac.svg
5
9
  :target: https://pypi.python.org/pypi/pylinac
6
10
  :alt: Latest Version
7
11
 
12
+ .. image:: https://img.shields.io/pypi/l/pylinac.svg
13
+ :target: https://pypi.python.org/pypi/pylinac/
14
+
8
15
  .. image:: https://travis-ci.org/jrkerns/pylinac.svg?branch=master
9
16
  :target: https://travis-ci.org/jrkerns/pylinac
10
17
 
@@ -13,9 +20,9 @@ Pylinac
13
20
 
14
21
 
15
22
  Pylinac provides TG-142 quality assurance (QA) tools to Python programmers as well as non-programmers in the field of
16
- therapy medical physics. The package comes in two flavors: source-level and GUI-level. The source-level
17
- allows programmers and those familiar with Python to create custom tests with pylinac while the GUI-level will implement
18
- pylinac into a GUI and executable that any user can use, without having to program software.
23
+ therapy medical physics. The package comes in two flavors: source-level and `web app <https://assuranceqa.herokuapp.com>`_. The source-level
24
+ allows programmers and those familiar with Python to create custom tests with pylinac while the web app is for
25
+ those who don't want or don't know how to program.
19
26
 
20
27
  Below are the tools currently available; tools will be added one at a time as they are developed.
21
28
 
@@ -26,14 +33,14 @@ Below are the tools currently available; tools will be added one at a time as th
26
33
  * `VMAT QA <http://pylinac.readthedocs.org/en/latest/vmat_docs.html>`_ -
27
34
  A module for analyzing EPID images after performing the Varian RapidArc QA tests, specifically the Dose Rate & Gantry Speed
28
35
  (DRGS) and MLC Speed (MLCS) tests. Can load the open and MLC field images and calculate segment ratios as per the Varian specs.
29
- * `CBCT QA <http://pylinac.readthedocs.org/en/latest/cbct_docs.html>`_ -
30
- A module to automatically analyze DICOM images of a CatPhan 504 delivered on a Varian linac. Corrects for yaw, pitch, roll
31
- and left-right, up-down displacement. Analysis is based on test descriptions in the
36
+ * `CT & CBCT QA <http://pylinac.readthedocs.org/en/latest/cbct_docs.html>`_ -
37
+ A module to automatically analyze DICOM images of a CatPhan 504. Automatically finds the phantom and corrects positioning in all
38
+ 6 degrees of freedom. Analysis is based on test descriptions in the
32
39
  `manual <http://www.phantomlab.com/library/pdf/catphan504manual.pdf>`_ and analyzes HU linearity and
33
40
  image scaling (CTP404), high-contrast line pairs to determine MTF (CTP528), and HU uniformity (CTP486).
34
41
  * `Log Analysis <http://pylinac.readthedocs.org/en/latest/log_analyzer.html>`_ -
35
42
  This module reads Varian logs, both Dynalogs and Trajectory logs and allows exploration of all axes measured. A single log can
36
- be analyzed as well as batch processing.
43
+ be analyzed as well as batch processing. Trajectory log versions 2.1 and 3.0 are both covered.
37
44
  * `Picket Fence MLC Analysis <http://pylinac.readthedocs.org/en/latest/picketfence.html>`_ -
38
45
  This module will analyze EPID MLC picket fence images, allowing for both a passed
39
46
  tolerance as well as an action tolerance. A semi-transparent overlay allows for quick pass/warn/fail assessment.
@@ -1,6 +1,6 @@
1
1
 
2
- __version__ = '0.4.1'
3
- __version_info__ = (0, 4, 1)
2
+ __version__ = '0.6.0.5'
3
+ __version_info__ = (0, 6, 0, 5)
4
4
 
5
5
  import sys
6
6
  if sys.version_info[0] < 3: