pylantir 0.0.3__py3-none-any.whl → 0.0.5__py3-none-any.whl

pylantir/cli/run.py

@@ -12,9 +12,6 @@ import importlib.util
 from dotenv import set_key
 from concurrent.futures import ThreadPoolExecutor  # for background thread
 
-from ..mwl_server import run_mwl_server
-from ..redcap_to_db import sync_redcap_to_db_repeatedly
-
 lgr = logging.getLogger(__name__)
 
 def setup_logging(debug=False):
@@ -195,16 +192,19 @@ def main() -> None:
     print("pynetdicom logger level:", logging.getLogger("pynetdicom").getEffectiveLevel())
 
 
-    if (args.command == "start"):
-        # Load configuration (either user-specified or default)
-        config = load_config(args.pylantir_config)
 
+    if (args.command == "start"):
         # Extract the database path (default to worklist.db if missing) &
         # Extract the database echo setting (default to False if missing)
         db_path = config.get("db_path", "./worklist.db")
         db_echo = config.get("db_echo", "False")
         update_env_with_config(db_path=db_path, db_echo=db_echo)
 
+        from ..mwl_server import run_mwl_server
+        from ..redcap_to_db import sync_redcap_to_db_repeatedly
+        # Load configuration (either user-specified or default)
+        config = load_config(args.pylantir_config)
+
         # Extract the database update interval (default to 60 seconds if missing)
         db_update_interval = config.get("db_update_interval", 60)
 
@@ -250,14 +250,17 @@ def main() -> None:
             )
 
     if (args.command == "query-db"):
+        from ..mwl_server import run_mwl_server
+        from ..redcap_to_db import sync_redcap_to_db_repeatedly
         lgr.info("Querying the MWL database")
 
         run_test_script(
             "query_db.py")
 
     if (args.command == "test-client"):
+        from ..mwl_server import run_mwl_server
+        from ..redcap_to_db import sync_redcap_to_db_repeatedly
         lgr.info("Running client test for MWL")
-
         # Run client.py to ensure that the worklist server is running and accepting connections
         run_test_script(
         "client.py",
@@ -267,9 +270,10 @@ def main() -> None:
         )
 
     if (args.command == "test-mpps"):
+        from ..mwl_server import run_mwl_server
+        from ..redcap_to_db import sync_redcap_to_db_repeatedly
         lgr.info("Running MPPS test")
         # Run MPPS tester with relevant arguments
-
         run_test_script(
             "mpps_tester.py",
             host=args.ip,

{pylantir-0.0.3.dist-info → pylantir-0.0.5.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pylantir
-Version: 0.0.3
+Version: 0.0.5
 Summary: Python - DICOM Modality WorkList
 Author-email: Milton Camacho <miltoncamachoicc@gmail.com>
 Requires-Python: >=3.11.1
@@ -64,6 +64,14 @@ To get started simply install using:
 pip install pylantir
 ```
 
+You need to provide your REDCap API URL and API token before starting the server.
+Set up environmental variables before starting the server:
+
+```bash
+export REDCAP_API_URL=<your API url>
+export REDCAP_API_TOKEN=<your API token>
+```
+
 Start a server called with AEtitle MWL_SERVER.
 
 ```bash

{pylantir-0.0.3.dist-info → pylantir-0.0.5.dist-info}/RECORD

@@ -6,9 +6,9 @@ pylantir/mwl_server.py,sha256=0NzZY2_uRI8QIeLeTFzQBuPyYxrKYrF1eHLNAnT4rXc,8662
 pylantir/populate_db.py,sha256=KIbkVA-EAuTlDArXMFOHkjMmVfjlsTApj7S1wpUu1bM,2207
 pylantir/redcap_to_db.py,sha256=ITiMAY-XB7B_-_8jUSAjdNqTngULjXBbWYjY4_Byh1U,8465
 pylantir/cli/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-pylantir/cli/run.py,sha256=nF2bCezJnHtt4AfUjdwF8O-Qimzb6p6EtxidykjbjaU,9942
+pylantir/cli/run.py,sha256=3auU1RW-RxJ9JQpWoUOXK5iXO4ff1WVyp19qqPmNZsk,10292
 pylantir/config/mwl_config.json,sha256=1Ma2guYAEAXQh1z7959aZadAn3ORjBqnDDibSLcwv_g,851
-pylantir-0.0.3.dist-info/entry_points.txt,sha256=vxaxvfGppLqRt9_4sqNDdP6b2jlgpcHIwP7UQfrM1T0,50
-pylantir-0.0.3.dist-info/WHEEL,sha256=CpUCUxeHQbRN5UGRQHYRJorO5Af-Qy_fHMctcQ8DSGI,82
-pylantir-0.0.3.dist-info/METADATA,sha256=5ORPuuVMNnbhBG4NJQJYM7gI6Lzunm85b2Qm4ZVm-IQ,6943
-pylantir-0.0.3.dist-info/RECORD,,
+pylantir-0.0.5.dist-info/entry_points.txt,sha256=vxaxvfGppLqRt9_4sqNDdP6b2jlgpcHIwP7UQfrM1T0,50
+pylantir-0.0.5.dist-info/WHEEL,sha256=CpUCUxeHQbRN5UGRQHYRJorO5Af-Qy_fHMctcQ8DSGI,82
+pylantir-0.0.5.dist-info/METADATA,sha256=ajRfFBP3c1uCneHPfmS-QDT-nkex9TQ0NXk5V6BeMkw,7176
+pylantir-0.0.5.dist-info/RECORD,,