pyholos 0.0.1__py3-none-any.whl → 0.1.0__py3-none-any.whl

pyholos/resources/holos/Table_62_Fractions_of_swine_N_volatilized.csv

@@ -1,25 +0,0 @@
-# This table is based on a homonym table provided by the Holos source code:
-# https://github.com/holos-aafc/Holos/blob/main/H.Content/Resources/Table_62_Fractions_of_swine_N_volatilized.csv
-# For sake of consistency with the official Canadian Provinces abbreviations (https://www12.statcan.gc.ca/census-recensement/2021/ref/dict/tab/index-eng.cfm?ID=t1_8),
-# the column "PEI" was renamed to "PE"
-#
-# original comment:
-# "Table 62. Fractions of swine N volatilized as ammonia resulting from the application of manure N fertilizer,
-# from select years, 1990–2020, at a provincial scale"
-# Implied EF (kg NH3-N volatilized kg-1 manure N applied)
-#
-# Source: ECCC (2022). For years other than the select years in the above table, the volatilization fraction is
-# determined based on the nearest neighbour approach.
-#
-Year,BC,AB,SK,MB,ON,QC,NS,NB,NL,PE,
-1990,0.22,0.14,0.15,0.14,0.21,0.26,0.28,0.28,0.22,0.28,
-1995,0.22,0.13,0.13,0.12,0.21,0.25,0.27,0.27,0.22,0.27,
-2000,0.22,0.13,0.12,0.11,0.2,0.25,0.25,0.25,0.23,0.26,
-2005,0.22,0.12,0.12,0.11,0.2,0.24,0.24,0.25,0.22,0.25,
-2010,0.21,0.12,0.12,0.11,0.2,0.24,0.23,0.24,0.23,0.25,
-2015,0.21,0.13,0.12,0.11,0.2,0.24,0.25,0.24,0.22,0.25,
-2016,0.21,0.13,0.12,0.11,0.2,0.24,0.25,0.24,0.22,0.25,
-2017,0.21,0.13,0.12,0.11,0.2,0.24,0.25,0.24,0.22,0.25,
-2018,0.21,0.13,0.12,0.11,0.2,0.24,0.25,0.24,0.22,0.25,
-2019,0.21,0.13,0.12,0.11,0.2,0.24,0.25,0.24,0.22,0.25,
-2020,0.2,0.13,0.12,0.11,0.2,0.24,0.26,0.24,0.23,0.25,

pyholos/resources/holos/Table_6_Manure_Types_And_Default_Composition.csv

@@ -1,126 +0,0 @@
-# This table is based on a homonym table provided by the Holos source code:
-# https://github.com/holos-aafc/Holos/blob/main/H.Content/Resources/Table_6_Manure_Types_And_Default_Composition.csv
-#
-# The original table and associated comments are commented in the following lines
-#
-# Manure type,,Moisture content (%),N content (% wet wt),C content (% wet wt),P content (% wet wt),C:N ratio,VS content (% wet weight) (27)
-# Beef cattle,Pasture/range/paddock (1),86,0.294,6.182,0.047,21.02,-9
-# Beef cattle,Deep bedding (2),60.08,0.715,12.63,0.223,17.66,20.25
-# Beef cattle,Solid storage (3),60.43,0.722,8.58,0.254,11.88,3.377
-# Beef cattle,Compost - passive windrow (4),62.35,0.659,9.16,0.255,13.9,7.814
-# Beef cattle,Compost - intensive windrow (5),37.42,1.041,14.48,0.398,13.91,7.814
-# Dairy cattle,Pasture/range/paddock,86 (1),-9 (6),6.182 (1),0.118 (6),-9 (6),-9
-# Dairy cattle,Deep bedding (2),60.08,0.715,12.63,0.223,17.66,20.25
-# Dairy cattle,Solid storage (7),77.3,0.392,2.99,0.118,7.63,3.377
-# Dairy cattle,Compost - passive windrow (8),78.11,0.265,4.72,-9,17.81,7.814
-# Dairy cattle,Compost - intensive windrow (8),78.11,0.265,4.72,-9,17.81,7.814
-# Swine,Composted in-vessel (9),79.23,0.279,9.13,-9,32.72,7.814
-# Sheep,Pasture/range/paddock ,75.0 (10),0.765 (10),6.182 (1),0.211 (10),8.08,-9
-# Sheep,Solid storage,67.8 (11),0.870 (11),8.58 (3),0.340 (11),9.86,3.377
-# Poultry,Solid storage - with or without litter (12),44.83,2.427,10.12,1.06,4.17,52.32
-# Llamas ,Pasture/range/paddock,75.0 (13),0.765 (13),6.182 (1),0.211 (13),8.08,-9
-# Alpacas,Pasture/range/paddock,75.0 (13),0.765 (13),6.182 (1),0.211 (13),8.08,-9
-# Deer,Pasture/range/paddock (1),86,0.294,6.182,0.047,21.02,-9
-# Elk,Pasture/range/paddock (1),86,0.29,6.182,0.047,21.02,-9
-# Goats,Pasture/range/paddock,75 (13),1.096 (14),6.182 (1),0.271 (14),5.64,-9
-# Horses,Pasture/range/paddock,80.0 (15),0.590 (15),6.182 (1),0.140 (15),10.48,-9
-# Mules,Pasture/range/paddock,80.0 (16),0.590 (16),6.182 (1),0.140 (16),10.48,-9
-# Bison,Pasture (17),86,0.294,6.182,0.047,21.02,-9
-# Llamas,Solid storage,67.8 (18),0.870 (18),8.58 (3),0.340 (18),9.86,-9
-# Alpacas,Solid storage,67.8 (18),0.870 (18),8.58 (3),0.340 (18),9.86,-9
-# Deer,Solid storage,35 (19),0.638 (19),8.58 (3),0.214 (19),13.45,-9
-# Elk,Solid storage,35 (19),0.638 (19),8.58 (3),0.214 (19),13.45,-9
-# Goats,Solid storage,53.58 (20),0.729 (20),8.58 (3),0.280 (20),11.77,-9
-# Horses,Solid storage,56.65 (21),0.864 (21),8.58 (3),0.155 (21),9.93,-9
-# Mules,Solid storage,56.65 (22),0.864 (22),8.58 (3),0.155 (22),9.93,-9
-# Bison,Solid storage,35 (23),0.638 (23),8.58 (3),0.214 (23),13.45,-9
-# Dairy cattle,Daily spread (24),94.41,0.209,2.19,0.06,10.48,0.37
-# Dairy cattle,Liquid/slurry with natural crust (24),94.41,0.209,2.19,0.06,10.48,0.37
-# Dairy cattle,Liquid/slurry with no natural crust (24),94.41,0.209,2.19,0.06,10.48,0.37
-# Dairy cattle,Liquid/slurry with solid cover (24),94.41,0.209,2.19,0.06,10.48,4.2
-# Dairy cattle,Deep pit under barn,94.41,0.209,2.19,0.06,10.48,4.2
-# Swine,Liquid/slurry with natural crust (26),95.16,0.325,1.29,0.118,3.97,2.975
-# Swine,Liquid/slurry with no natural crust (26),95.16,0.325,1.29,0.118,3.97,2.975
-# Swine,Liquid/slurry with solid cover (26),95.16,0.325,1.29,0.118,3.97,3.7
-# Swine,Deep pit under barn (26),95.16,0.325,1.29,0.118,3.97,3.7
-# ,,,,,,
-# ,,,,,,
-# "Data on manure composition were organized from multiple publications based on Canadian studies (extension documents, reports, journal publications). Where data from Canada were not available, data were sourced from outside Canada – any non-Canadian data used is indicated in the relevant notes below.",,,,,,
-# "1 Moisture content and N, C and P content for beef cattle manure deposited on pasture were derived from unpublished data (provided by X. Hao, AAFC). For all other animals on pasture (dairy cattle, sheep and other livestock), the moisture content and C, N and P content values for beef cattle were used where needed, due to a lack of available data for these groups.",,,,,,
-# "2 Default values for moisture content and N, C and P content for deep bedding manure for beef cattle were averages calculated from data derived from the following sources: Paul and Beauchamp (1994); Hao et al. (2001,2004,2009,2014); Whalen et al. (2002); Miller et al. (2003,2004,2009); Helgason et al. (2005); Larney and Olson (2006); Larney et al. (2006); Zvomuya et al. (2006); Stefankiw (2012). These values were also used for deep bedding for dairy cattle.",,,,,,
-# "3 Default values for moisture content and C, N and P content for solid storage (stockpiled) manure for beef cattle were averages calculated from data derived from the following sources: Paul and Beauchamp (1993); Olson and Papworth (2002); Sommer et al. (2004); Loro (2005); Pattey et al. (2005); Larney et al. (2006); The Prairie Provinces’ Committee on Livestock Development and Manure Management (2006a,b); Government of Manitoba (2009); Brown (2013). For sheep and other livestock manure in solid storage, the Ccontent for beef cattle manure for solid storage (stockpiled) was used.",,,,,,
-# "4 Default values for moisture content and C, N and P content for composted passive manure for beef cattle were averages calculated from data derived from the following sources: Paul and Beauchamp (1989,1993,1994); Pattey et al. (2005); Larney and Olson (2006); Larney et al. (2006).",,,,,,
-# "5 Default values for moisture content and C, N and P content for composted intensive manure for beef cattle were averages calculated from data derived from the following sources: Miller et al. (2004,2009); Hao et al. (2004, 2014); Helgason et al. (2005); Larney and Olson (2006); Zvomuya et al. (2006); Larney et al. (2008,2014); Stefankiw (2012).",,,,,,
-# "6 The Ncontent of excreted dairy manure (urine + feces) deposited on pasture is from Nennich et al. (2005) as follows: lactating cow: 0.653%; dry cow: 0.591%; heifer: 0.478%; calf: 0.508% (these values were calculated using data in Table 4 in Nennich et al) - as the Ncontent varies so too does the C:N ratio, depending on the animal group; the Pcontent of excreted dairy manure was calculated using data for dairy cows from Hofmann and Beaulieu (2006).",,,,,,
-# "7 Default values for moisture content and C, N and P content for solid storage (stockpiled) manure for dairy cattle were averages calculated from data derived from the following sources: Pattey et al. (2005); Government of Manitoba (2009); Brown (2013); Manitoba Agriculture, Food and Rural Development (2015); Fillingham et al. (2017); Ackerman et al. (2018).",,,,,,
-# "8 Default values for moisture content and C, N and P content for composted manure (incl. composted separated solids) for dairy cattle were averages calculated from data derived from the following sources: Paul and Beauchamp (1989,1993); Pattey et al. (2005); Cambareri et al. (2017); Fillingham et al. (2017). The same values are applied to composted passive and composted intensive dairy manure.",,,,,,
-# "9 Default values for moisture content and C, N and P content for composted manure for swine (liquid manure mixed with straw composted in-vessel) were averages calculated from data derived from the following sources: Thompson et al. (2004); Park et al. (2014).",,,,,,
-# "10 Values for moisture content of sheep manure (as excreted) from Bell (1983); Ncontent was calculated using data from ECCC (2021) and Hofmann and Beaulieu (2006); Pcontent was calculated from Hofmann and Beaulieu (2006).",,,,,,
-# "11 Default values for moisture content and N and P content for solid sheep manure were averages calculated from data derived from Brown (2013).",,,,,,
-# "12 Default values for moisture content and C, N and P content for solid poultry manure were averages calculated from data derived from the following sources: Paul and Beauchamp (1989); Government of Manitoba (2009); Brown (2013); Manitoba Agriculture, Food and Rural Development (2015); Sukler et al. (2015); Government of Alberta (2021).",,,,,,
-# "13 Default values for moisture content and C, N and P content for sheep manure deposited on pasture were applied to llama and alpaca manure deposited on pasture; the moisture content for sheep manure deposited on pasture was applied to goat manure deposited on pasture.",,,,,,
-# "14 The Ncontent of goat manure deposited on pasture was calculated using data from ECCC (2021) and Hofmann and Beaulieu (2006); Pcontent was calculated from Hofmann and Beaulieu (2006).",,,,,,
-# "15 Default values for moisture content for horse manure deposited on pasture were derived from Bell (1983), for Ncontent from Hofmann and Beaulieu (2006) and ECCC (2021), and for Pcontent from Hofmann and Beaulieu (2006).",,,,,,
-# "16 Moisture content, Ncontent and Pcontent values for horses on pasture used for mules on pasture.",,,,,,
-# "17 Moisture content, Ncontent, Ccontent and Pcontent values for beef cattle on pasture used for bison on pasture.",,,,,,
-# "18 Moisture content, Ncontent and Pcontent values for sheep manure in solid storage are used for llama and alpaca manure in solid storage (drylot).",,,,,,
-# "19 Default values for moisture content, Ncontent and Pcontent values for deer/elk manure in solid storage (drylot) were derived from Government of Alberta (2013,2021).",,,,,,
-# "20 Moisture content, Ncontent and Pcontent values for manure in solid storage (drylot) for goats derived from Brown (2013); Government of Alberta (2013).",,,,,,
-# "21 Default values for moisture content, Ncontent and Pcontent for horse manure in solid storage (drylot) were derived from: Brown (2013); Government of Alberta (2013,2021); Sukler et al. (2015); Fraser (2021).",,,,,,
-# "22 Moisture content, Ncotent and Pcontent values for horse manure in solid storage are used for mule manure in solid storage (drylot).",,,,,,
-# "23 Default values for moisture content, Ncontent and Pcontent for bison manure in solid storage (drylot) were derived from: Government of Alberta (2013,2021).",,,,,,
-# "24 Default values for moisture content and C, N and P content for liquid/slurry manure for dairy cattle were averages calculated from data derived from the following sources: Paul and Beauchamp (1989,1993); Pattey et al. (2005); The Prairie Provinces’ Committee on Livestock Development and Manure Management (2006a); Government of Manitoba (2009); VanderZaag et al. (2009,2010a,b); Brown (2013); Manitoba Agriculture, Food and Rural Development (2015); LeRiche et al. (2016); Ngwabie et al. (2016); Fillingham et al. (2017); Ackerman et al. (2018); Balde et al. (2018); Johannesson et al. (2018); Kariyapperuma et al. (2018a,b); Maldaner et al. (2018). These default values are used for all dairy liquid/slurry manure types: ""Daily spread"", ""Liquid with natural crust"", ""Liquid with no natural crust"", ""Liquid with solid cover"" and ""Deep pit under barn"" (pit storage below animal confinement).",,,,,,
-# "25 Default values for moisture content and C, N and P fractions for anaerobic digestate for dairy cattle were averages calculated from data derived from the following sources: Balde et al. (2018); Evans et al. (2018); Maldaner et al (2018).",,,,,,
-# "26 Default values for moisture content and C, N and P content for liquid/slurry for swine were averages calculated from data derived from the following sources: Paul and Beauchamp (1989); Fitzgerald and Racz (2001); Olson and Papworth (2002); Dick (2003); Thompson et al. (2004); The Prairie Provinces’ Committee on Livestock Development and Manure Management (2006a,b); Government of Manitoba (2009); Coppi (2012); Brown (2013); Tenuta et al. (2013); Park et al. (2014); Manitoba Agriculture, Food and Rural Development (2015). These default values are used for all swine liquid/slurry manure types: ""Liquid with natural crust"", ""Liquid with no natural crust"", ""Liquid with solid cover"" And ""Deep pit under barn"" (pit storage below animal confinement).",,,,,,
-# "27 Default values for volatile solids (VS) content (% wet weight) were derived from the following sources: Beef cattle (deep bedding) - Wedwitschka et al. (2021); Beef cattle (solid storage, compost - passive windrow and compost - active windrow) - values used are for dairy cattle solid storage and composted manure; Dairy cattle (deep bedding) - value used is for beef cattle deep bedding; Dairy cattle (solid storage) - Ackerman et al. (2018), Fillingham et al. (2017); Dairy cattle (compost - passive windrow and compost - active windrow) - Fillingham et al. (2017); Swine (composted in-vessel) - value used is for dairy cattle composted manure; Sheep (solid storage) - value used is for dairy cattle solid storage manure; Poultry (solid storage - with or without litter) - Farrow (2016), Hillborn (2011); Dairy cattle (daily spread, liquid/slurry with and without natural crust) - Dalby et al. (2021); Dairy cattle (liquid/slurry with solid cover and deep pit under barn) - Dalby et al. (2021), Johanesson et al. (2015); Swine (liquid/slurry with and without natural crust) - Dalby et al. (2021), VanderZaag et al. (2021); Swine (liquid/slurry with solid cover and deep pit under barn) - Dalby et al. (2021)
-#
-# The following column names were changed:
-# "Manure type" to "animal_type"
-# "" to "manure_state_type"
-# "Moisture content (%)" to "moisture_content"
-# "N content (% wet wt)" to "nitrogen_content"
-# "C content (% wet wt)" to "carbon_content"
-# "P content (% wet wt)" to "phosphorus_content"
-# "C:N ratio" to "carbon_to_nitrogen_ratio"
-# "VS content (% wet weight)" to "volatile_solid_content"
-#
-animal_type,manure_state_type,moisture_content,nitrogen_content,carbon_content,phosphorus_content,carbon_to_nitrogen_ratio,volatile_solid_content
-Beef cattle,Pasture/range/paddock,86,0.294,6.182,0.047,21.02,-9
-Beef cattle,Deep bedding,60.08,0.715,12.63,0.223,17.66,20.25
-Beef cattle,Solid storage,60.43,0.722,8.58,0.254,11.88,3.377
-Beef cattle,Compost - passive windrow,62.35,0.659,9.16,0.255,13.9,7.814
-Beef cattle,Compost - intensive windrow,37.42,1.041,14.48,0.398,13.91,7.814
-Dairy cattle,Pasture/range/paddock,86,-9,6.182,0.118,-9,-9
-Dairy cattle,Deep bedding,60.08,0.715,12.63,0.223,17.66,20.25
-Dairy cattle,Solid storage,77.3,0.392,2.99,0.118,7.63,3.377
-Dairy cattle,Compost - passive windrow,78.11,0.265,4.72,-9,17.81,7.814
-Dairy cattle,Compost - intensive windrow,78.11,0.265,4.72,-9,17.81,7.814
-Swine,Composted in-vessel,79.23,0.279,9.13,-9,32.72,7.814
-Sheep,Pasture/range/paddock,75.0,0.765,6.182,0.211,8.08,-9
-Sheep,Solid storage,67.8,0.870,8.58,0.340,9.86,3.377
-Poultry,Solid storage - with or without litter,44.83,2.427,10.12,1.06,4.17,52.32
-Llamas ,Pasture/range/paddock,75.0,0.765,6.182,0.211,8.08,-9
-Alpacas,Pasture/range/paddock,75.0,0.765,6.182,0.211,8.08,-9
-Deer,Pasture/range/paddock,86,0.294,6.182,0.047,21.02,-9
-Elk,Pasture/range/paddock,86,0.29,6.182,0.047,21.02,-9
-Goats,Pasture/range/paddock,75,1.096,6.182,0.271,5.64,-9
-Horses,Pasture/range/paddock,80.0,0.590,6.182,0.140,10.48,-9
-Mules,Pasture/range/paddock,80.0,0.590,6.182,0.140,10.48,-9
-Bison,Pasture,86,0.294,6.182,0.047,21.02,-9
-Llamas,Solid storage,67.8,0.870,8.58,0.340,9.86,-9
-Alpacas,Solid storage,67.8,0.870,8.58,0.340,9.86,-9
-Deer,Solid storage,35,0.638,8.58,0.214,13.45,-9
-Elk,Solid storage,35,0.638,8.58,0.214,13.45,-9
-Goats,Solid storage,53.58,0.729,8.58,0.280,11.77,-9
-Horses,Solid storage,56.65,0.864,8.58,0.155,9.93,-9
-Mules,Solid storage,56.65,0.864,8.58,0.155,9.93,-9
-Bison,Solid storage,35,0.638,8.58,0.214,13.45,-9
-Dairy cattle,Daily spread,94.41,0.209,2.19,0.06,10.48,0.37
-Dairy cattle,Liquid/slurry with natural crust,94.41,0.209,2.19,0.06,10.48,0.37
-Dairy cattle,Liquid/slurry with no natural crust,94.41,0.209,2.19,0.06,10.48,0.37
-Dairy cattle,Liquid/slurry with solid cover,94.41,0.209,2.19,0.06,10.48,4.2
-Dairy cattle,Deep pit under barn,94.41,0.209,2.19,0.06,10.48,4.2
-Swine,Liquid/slurry with natural crust,95.16,0.325,1.29,0.118,3.97,2.975
-Swine,Liquid/slurry with no natural crust,95.16,0.325,1.29,0.118,3.97,2.975
-Swine,Liquid/slurry with solid cover,95.16,0.325,1.29,0.118,3.97,3.7
-Swine,Deep pit under barn,95.16,0.325,1.29,0.118,3.97,3.7

pyholos/resources/holos/Table_7_Relative_Biomass_Information.csv

@@ -1,112 +0,0 @@
-# This table is based on a homonym table provided by the Holos source code:
-# https://github.com/holos-aafc/Holos/blob/main/H.Content/Resources/Table_7_Relative_Biomass_Information.csv
-#
-# Note:
-# the following line was moved from the table (indicated below as "note(1)" in order to facilitate data parsing:
-# note(1): "Approximate mid-point of values from www.ontario.ca (75% MC in dry year, 80% MC in normal year, 85% MC in wet year), madbarn.ca (70-80% MC) and fieldcropnews.com (70-85% MC)"
-#
-Group,Crop,,Moisture content of product (% w/w),,Relative C allocation coefficient,,,,References,,N content (g N/kg),,,References,,Lignin Content,Biomethane potential (Nm^3 ton^-1 VS) for straw/silage,f_CH4 Fraction of methane in biogas,Volatile Solids (% TS),TS (kg t^-1)^3,TN Substrate (Kg N t^-1)^5
-,,,,,,,,,,,,,,,,,,,,,
-,,,,,Rp Product,Rs Straw,Rr Root,Re Extra-root,,,Np Product,Ns Straw,Nr Root / Ne Extra-root,,,,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-,Summerfallow,,0,,0,0,0,0,,,0,0,0,Janzen et al. (2003),,,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-Small-grain cereals,Small grain cereals,Rainfed,12,,0.32,0.511,0.102,0.067,Little et al. (2008),,23.9,6,10,Little et al. (2008),,0.073,,,,,
-,Wheat,<200 mm,12,,0.219,0.551,0.136,0.095,Fang et al. (2016),,27.9,8.6,13.4,Gan et al. (2009); Gan et al. (2011),,0.053,162,0.6,90,880,7.8
-,Wheat,200 -350 mm,12,,0.244,0.518,0.147,0.091,Gan et al. (2011),,26.3,8.2,10.4,Gan et al. (2009),,0.053,162,0.6,90,880,7.8
-,Wheat,>350 mm,12,,0.431,0.488,0.049,0.032,Soon and Lupwayi (2012),,56.2,6.5,11.9,Bolinder et al. (2007); Janzen et al. (2003),,0.053,162,0.6,90,880,7.8
-,Barley,<350,12,,0.451,0.4,0.09,0.059,Bolinder et al. (2007),,19,7,10,Janzen et al. (2003),,0.046,267,0.44,90,880,6.1
-,Barley,350-750,12,,0.432,0.445,0.074,0.048,Soon and Lupwayi (2012),,23.9,7.3,9.7,Soon and Lupwayi (2012),,0.046,267,0.44,90,880,6.1
-,Barley,>750,12,,0.424,0.498,0.047,0.031,Hakala et al. (2009),,19,3.8,9.5,Hakala et al. (2009),,0.046,267,0.44,90,880,6.1
-,Undersown Barley,Canada,12,,0.411,0.241,0.211,0.137,Bolinder et al. (2007),,19,7,10,Janzen et al. (2003),,0.046,267,0.44,90,880,6.1
-,Oats,Canada,12,,0.319,0.283,0.241,0.157,Bolinder et al. (2007),,18,6,10,Janzen et al. (2003),,0.047,287,0.52,90,880,6
-,Triticale,Canada,12,,0.26,0.506,0.142,0.092,Bolinder et al. (2007),,22,6,10,Janzen et al. (2003),,0.053,195,0.6,90,880,6
-,Sorghum,Canada,12,,0.219,0.656,0.075,0.05,Bolinder et al. (2007),,25,6,10,Little et al. (2008),,0.06,,,,,
-,Canary seed,Canada,8,,0.21,0.511,0.212,0.067,Janzen et al. (2003); Little et al. (2008),,25,7,10,Cogliatti et al. (2011),,0.073,,,,,
-,Buckwheat,Canada,12,,0.32,0.511,0.102,0.067,Small grain cereals (Little et al. 2008),,18,6,10,Janzen et al. (2003),,0.053,,,,,
-,Mixed grains,Canada,12,,0.32,0.511,0.102,0.067,Small grain cereals (Little et al. 2008),,22.3,6.3,10,Janzen et al. (2003),,0.047,,,,,
-,Grain corn,Canada,15,,0.386,0.387,0.138,0.089,Bolinder et al. (2007),,15,5,7,Janzen et al. (2003),,0.11,427,0.54,88,850,5
-,,,,,,,,,,,,,,,,,,,,,
-Silage,Corn Silage,Canada,70,,0.866,0,0.081,0.053,Bolinder et al. (2007),,13,13,7,Dietzel et al. (2014); Janzen et al. (2003),,0.11,304,0.45,95,640,13
-,Barley Silage,<350,63,,0.851,0,0.09,0.059,,,12.7,0,10,,,0.046,,,,,
-,Barley Silage,350-750,63,,0.877,0,0.074,0.048,,,12.1,0,9.7,,,0.046,,,,,
-,Barley Silage,>750,63,,0.922,0,0.047,0.031,,,29.7,0,9.5,,,0.046,,,,,
-,Oat Silage,Canada,62,,0.602,0,0.241,0.157,,,8.1,0,10,,,0.047,442,0.6,83,380,8.1
-,Triticale Silage,Canada,60,,0.766,0,0.142,0.092,,,14.5,0,10,,,0.053,,,,,
-,Wheat Silage,<200 mm,57,,0.77,0,0.136,0.095,,,14.1,0,13.4,,,0.053,,,,,
-,Wheat Silage,200 -350 mm,57,,0.762,0,0.147,0.091,,,14,0,10.4,,,0.053,,,,,
-,Wheat Silage,>350 mm,57,,0.919,0,0.049,0.032,,,29.8,0,11.9,,,0.053,,,,,
-,Grass Silage,Canada,57,,0.441,0,0.339,0.22,Bolinder et al. (2007),,16,16,10,Janzen et al. (2003),,0.057,366,0.46,88,267,7.7
-,,,,,,,,,,,,,,,,,,,,,
-Oilseeds,Oilseeds,Rainfed,9,,0.184,0.637,0.109,0.071,Little et al. (2008),,61.5,7,10,Little et al. (2008); Average of oilseeds below,,0.073,,,,,
-,Oilseeds,Irrigated,9,,0.213,0.619,0.101,0.066,Little et al. (2008),,61.5,7,10,Little et al. (2008); Average of oilseeds below,,0.073,,,,,
-,Camelina,Canada,9,,0.12,0.34,0.34,0.2,Pan (2010),,54.1,4.6,15.35,Olughu et al. (2019); Mohammad et al. (2018); Obeng et al. (2020),,0.15,,,,,
-,Canola,<200 mm,9,,0.133,0.533,0.208,0.126,Gan et al. (2011),,63.6,13.6,8.3,Gan et al. (2009),,0.073,,,,,
-,Canola,200 -350 mm,9,,0.176,0.529,0.183,0.111,Gan et al. (2011),,62.1,9.9,13.4,Gan et al. (2009),,0.073,,,,,
-,Canola,>350 mm,9,,0.203,0.561,0.144,0.093,Soon and Lupwayi (2012),,42,7.1,10.8,Soon and Lupwayi (2012),,0.073,,,,,
-,Mustard,<200 mm,9,,0.176,0.557,0.166,0.102,Gan et al. (2011),,68.6,13.6,10.3,Gan et al. (2009),,0.073,,,,,
-,Mustard,>200mm,9,,0.21,0.54,0.155,0.095,Gan et al. (2011),,63.9,9.4,10.4,Gan et al. (2009),,0.073,,,,,
-,Flax,<200 mm,8,,0.189,0.634,0.123,0.054,Gan et al. (2011),,56.7,11.8,6,Gan et al. (2009),,0.15,,,,,
-,Flax,>200mm,8,,0.199,0.63,0.105,0.066,Gan et al. (2011),,76,9.7,9.2,Gan et al. (2009),,0.15,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-Pulse crops,Pulse crops,Rainfed,13,,0.29,0.515,0.118,0.077,Little et al. (2008),,59.1,20.4,15.8,Average of pulse crops below,,0.075,,,,,
-,Pulse crops,Irrigated,13,,0.343,0.527,0.079,0.051,Little et al. (2008),,59.1,20.4,15.8,Average of pulse crops below,,0.075,,,,,
-,Soybean,Canada,14,,0.304,0.455,0.146,0.095,Bolinder et al. (2007),,67,6,10,Janzen et al. (2003),,0.085,,,,,
-,Beans (dry field),Canada,13,,0.539,0.412,0.03,0.019,Berrocal-Ibarra et al. (2002),,42,10,10,Janzen et al. (2003),,0.085,,,,,
-,Chickpea,<200 mm,13,,0.28,0.42,0.187,0.113,Gan et al. (2011),,65.9,23.9,11,Gan et al. (2009),,0.075,,,,,
-,Chickpea,>200mm,13,,0.358,0.42,0.137,0.085,Gan et al. (2011),,56.7,23.4,18.9,Gan et al. (2009),,0.075,,,,,
-,Dry Pea,<200 mm,13,,0.245,0.49,0.162,0.103,Gan et al. (2011),,70.4,30.4,22.5,Gan et al. (2009),,0.075,,,,,
-,Dry Pea,>200mm,13,,0.263,0.533,0.126,0.078,Gan et al. (2011),,69.4,31.6,28.2,Gan et al. (2009),,0.075,,,,,
-,Lentil,<200 mm,13,,0.231,0.448,0.2,0.121,Gan et al. (2011),,64.1,23.4,15,Gan et al. (2009),,0.075,,,,,
-,Lentil,>200mm,13,,0.311,0.458,0.142,0.09,Gan et al. (2011),,61.3,25.8,16.2,Gan et al. (2009),,0.075,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-Root crops,Potato,Canada,75,,0.736,0.239,0.015,0.01,Bolinder et al. (2015),,15,20,10,Janzen et al. (2003),,0.073,,,,,
-,Potato,AB,80,,0.771,0.155,0.045,0.029,J. Neilson (pers. Comm. 2019),,15,20,10,Janzen et al. (2003),,0.073,,,,,
-,Sugar Beets,Canada,80,,0.626,0.357,0.01,0.007,Bolinder et al. (2007),,10,29,10,Janzen et al. (2003),,0.073,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-Other field crops,Safflower,Canada,2,,,,,,,,24,10,10,Janzen et al. (2003),,0.073,,,,,
-,Sunflower seed,Canada,2,,,,,,,,24,10,10,Janzen et al. (2003),,0.073,200,0.6,90,891,10
-,Tobacco,Canada,13,,,,,,,,20,10,10,Janzen et al. (2003),,0.073,,,,,
-,Vegetables,Canada,80,,,,,,,,20,20,10,Janzen et al. (2003),,,,,,,
-,Berries & grapes,Canada,85,,,,,,,,7,20,10,Janzen et al. (2003),,,,,,,
-,Other field crops,Canada,10,,,,,,,,33.25,9.75,10,Janzen et al. (2003),,,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-Cover crops,Winter weeds,Canada,65,,0.982,,0.011,0.007,Sainju et al. (2005),,23.9,6,10,Small grain cereals (Little et al. 2008),,,,,,,
-,Red clover (Trifolium pratense L.),Canada,65,,0.732,,0.162,0.106,Bender et al. (2017),,23.4,,10,Juca Taveira et al. (2020); Thiessen Martens et al. (2019),,0.063,,,,,
-,Berseem clover (Trifolium alexandrium L.),Canada,65,,0.722,,0.168,0.109,Bender et al. (2017); Toom et al. (2019),,32.6,,52.6,Bender et al. (2017); Toom et al. (2019),,0.063,,,,,
-,Sweet clover (Melilotus officinalis),Canada,65,,,,,,,,22,,,Thiessen Martens et al. (2019),,0.063,,,,,
-,Crimson clover (Trifolium incarnatum),Canada,65,,0.761,,0.145,0.094,Bender et al. (2017),,43.8,,30.5,Bender et al. (2017),,0.063,,,,,
-,Hairy Vetch (Vicia villosa roth),Canada,65,,0.668,,0.201,0.131,Puget & Drinkwater (2001); Kuo et al. 1997; Sainju et al. 2005; Ramirez-Garcia et al. 2015; Santos et al. 2011,,34.4,,14,Sainju et al. (2000); Thiessen Martens et al. (2019); Kuo et al. 1997; Sainju et al. 2005; Ramirez-Garcia et al. 2015,,0.081,,,,,
-,Alfalfa (Medicago sativa L.),Canada,65,,0.744,,0.155,0.101,Ghimire et al. (2014),,61,,83.4,Ghimire et al. (2014); Thiessen Martens et al. (2019),,0.133,,,,,
-,Faba bean/broad bean (Vicia faba),Canada,65,,,,,,,,19.7,,,Thiessen Martens et al. (2019),,0.046,,,,,
-,Cowpea (Vigna unguiculata),Canada,65,,0.516,,0.294,0.191,Franzluebbers et al. (1994),,23.9,,20.8,Franzluebbers et al. (1994),,0.046,,,,,
-,Austrian winter pea,Canada,65,,0.498,,0.304,0.198,Kuo et al. 1997,,23.5,,12.5,Kuo et al. 1997,,0.046,,,,,
-,Rapeseed (Brassica Napus L.),Canada,65,,0.661,,0.206,0.134,Kuo et al. 1997,,14.7,,6,Kuo et al. 1997,,0.073,,,,,
-,"Winter turnip rape [Brassica Rapa spp. oleifera L. (cv. ""Largo"")]",Canada,65,,0.692,,0.197,0.111,Toom et al. 2019,,22,,22,Toom et al. 2019,,0.073,,,,,
-,Phacelia [Phacelia tanacetifolia (cv. 'Phaci')],Canada,65,,,,,,,,22.2,,,Luna et al. 2018,,,,,,,
-,Forage radish (Raphanus sativus L.),Canada,65,,0.532,,0.284,0.185,Wang et al. 2018; Toom et al. 2019; Toom et al. 2020; Lawley et al. 2011,,29.2,,19.7,Wang et al. 2018; Toom et al. 2019; Toom et al. 2020,,0.073,,,,,
-,Mustard (Sinapus alba L. subsp. Mairei (H. Lindb.) Maire),Canada,65,,0.842,,0.096,0.062,Lenzi et al. 2009,,15,,20,Lenzi et al. 2009,,0.073,,,,,
-,Barley (Hordeum vulgare),Canada,65,,0.885,,0.07,0.045,Bergstrom & Jokela 2001; Lenzi et al. 2009,,11.3,,13.2,Bergstrom & Jokela 2001; Lenzi et al. 2009,,0.046,,,,,
-,Oat (Avena sativa),Canada,65,,0.737,,0.16,0.104,Kaspar et al. 2012; Santos et al. 2011; Francis et al. 1998; Lenzi et al. 2009,,24.3,,15.7,Kaspar et al. 2012; Francis et al. 1998,,0.047,,,,,
-,Rye (Secale cereale) / Winter rye / Cereal rye,Canada,65,,0.577,,0.266,0.157,Kaspar et al. 2012; Austin et al. 2017; Austin et al. 2018; Lenzi et al. 2009; Toom et al. 2019; Kuo et al. 1997,,12.4,,5.5,Kaspar et al. 2012; Lenzi et al. 2009; Toom et al. 2019; Kuo et al. 1997,,0.053,,,,,
-,Sesame (Sesamum indicum),Canada,65,,,,,,,,,12.2,,Creamer & Baldwin 2000,,0.053,,,,,
-,Flax (Linum usitatissimum),Canada,65,,0.906,,0.057,0.037,Lenzi et al. 2009,,12.6,,10.2,Lenzi et al. 2009,,0.15,,,,,
-,Ryegrass (Lolium Perenne L.),Canada,65,,0.532,,0.284,0.184,Bergstrom & Jokela 2001,,12.4,,7.6,Bergstrom & Jokela 2001,,0.063,,,,,
-,Annual Ryegrass (Lolium multiflorum),Canada,65,,0.493,,0.307,0.2,Santos et al. 2011; Kuo et al. 1997,,10.2,,5.2,Kuo et al. 1997,,0.041,,,,,
-,Sorghum (Sorghum bicolour),Canada,65,,0.863,,0.083,0.054,Sainju et al. 2005,,,,,,,0.053,,,,,
-,Pigeon Bean,Canada,65,,0.921,,0.048,0.031,Lenzi et al. 2009,,27.8,,15,Lenzi et al. 2009,,0.046,,,,,
-,Shepherd's purse,Canada,65,,0.352,,0.393,0.255,Kuo et al. 1997,,16.3,,9.4,Kuo et al. 1997,,0.075,,,,,
-,Winter wheat (Triticum aestivum),Canada,12,,0.451,0.34,0.126,0.082,Francis et al. 1998; Santos et al. 2011,,22.6,6,10,Francis et al. 1998; Little et al. (2008),,0.053,,,,,
-,(Fall) Rye,Canada,12,,0.32,0.511,0.102,0.067,Small grain cereals (Little et al. 2008),,18,6,10,Janzen et al. (2003),,0.053,241,0.44,94,880,6
-,,,,,,,,,,,,,,,,,,,,,
-Perennial forages,Rangeland (native),Canada,13,,0.233,0,0.465,0.302,Bolinder et al. (2007),,15,15,15,Janzen et al. (2003),,0.049,,,,,
-,Perennial forages,Canada,13,,0.492,0,0.308,0.2,Bolinder et al. (2007),,26,15,15,Janzen et al. (2003),,0.049,,,,,
-,Tame grass,Canada,13,,0.441,0,0.339,0.22,Bolinder et al. (2007),,16,16,10,Janzen et al. (2003),,0.057,332,0.54,82,870,15
-,Tame legume,Canada,13,,0.571,0,0.26,0.169,Bolinder et al. (2007),,15,15,15,Little et al. (2008),,0.072,,,,,
-,Tame mixed,Canada,13,,0.298,0,0.426,0.277,Bolinder et al. (2007),,15,15,15,Little et al. (2008),,0.061,,,,,
-,Seeded grassland,Canada,13,,0.317,0,0.414,0.269,Little et al. (2008),,15,15,15,Janzen et al. (2003),,0.049,,,,,
-,Forage for seed,Canada,13,,0.1,0.392,0.308,0.2,Perenial forages (Bolinder et al. 2007),,30,15,13,Janzen et al. (2003),,0.049,,,,,
-,Grazed pasture (all perennial types),Canada,80,,,,,,note(1),,,,,,,,,,,,
-,,,,,,,,,,,,,,,,,,,,,
-Trees,Total tree fruits & nuts,Canada,84,,,,,,,,2,10,10,Janzen et al. (2003),,,,,,,

pyholos/resources/holos/Table_9_Default_Values_For_Nitrogen_Lignin_In_Crops.csv

@@ -1,72 +0,0 @@
-# This table is based on a homonym table provided by the Holos source code:
-# https://github.com/holos-aafc/Holos/blob/main/H.Content/Resources/Table_9_Default_Values_For_Nitrogen_Lignin_In_Crops.csv
-#
-Group,Crops,Intercept,Slope,RSt,N Content of Residues (1),Lingin Content of residues (2),Moisture Content %,Biomethane potential (Nm^3 ton^-1 VS) for straw/silage,f_CH4 Fraction of methane in biogas,Volatile Solids (% TS),TS (kg t^-1)^3,TN Substrate (Kg N t^-1)^5
-,Summerfallow,0,0,0,0,0,0
-,,,,,,,
-Small-grain cereals,Small-grain cereals,0.38,0.015,0.248,0.0083,0.073,12
-,Spring wheat,0.344 (3),0.015 (3),0.229,0.007,0.053,12,162,0.6,90,880,7.8
-,Barley,0.373 (3),0.028 (3),0.21,0.009,0.046,12,267,0.44,90,880,6.1
-,Oats,0.357 (3),0.029 (3),0.419,0.0073,0.047,12,287,0.52,90,880,6
-,Triticale,0.344,0.015,0.229,0.007,0.053,12,195,0.6,90,880,6
-,Sorghum (4),-9,-9,-9,0.0065,0.06,12,,,,,
-,Canary Seed,0.171,0.11,0.193,0.008,0.073,8,,,,,
-,Buckwheat,0.344,0.015,0.229,0.007,0.053,12,,,,,
-,Mixed Grains,0.357,0.029,0.419,0.0073,0.047,12,,,,,
-,Grain Corn,0.369 (3),0.015 (3),0.25,0.0063,0.11,15,427,0.54,88,850,5
-,Rye,0.344,0.015,0.229,0.007,0.053,12,241,0.44,94,880,6
-,Durum wheat,0.344 (3),0.015 (3),0.229,0.007,0.053,12,162,0.6,90,880,7.8
-,,,,,,,
-Silage,Corn Silage,0.369 (3),0.015 (3),0.25,0.0063,0.11,70,304,0.45,95,640,13
-,Barley Silage,0.373 (3),0.028 (3),0.21,0.009,0.046,63,,,,,
-,Oat Silage,0.357 (3),0.029 (3),0.419,0.0073,0.047,62,442,0.6,83,380,8.1
-,Triticale Silage,0.344,0.015,0.229,0.007,0.053,60,,,,,
-,Wheat Silage,0.344 (3),0.015 (3),0.229,0.007,0.053,57,,,,,
-,,,,,,,
-Oilseeds,Oilseeds,0.197,0.078,0.246,0.008,0.073,9,,,,,
-,Canola,0.18 (3),0.046 (3),0.375,0.0083,0.073,9,,,,,
-,Mustard,0.18,0.046,0.375,0.0083,0.073,9,,,,,
-,Flax,0.171 (3),0.11 (3),0.193,0.0063,0.15,8,,,,,
-,,,,,,,
-Pulse crops,Pulse crops,0.279,0.046,0.223,0.008,0.075,13
-,Soybeans,0.2 (3),0.099 (3),0.224,0.008,0.085,14,,,,,
-,Beans (dry field),0.2,0.099,0.224,0.008,0.085,13,,,,,
-,Chickpea,0.301 (3),0.063 (3),0.219,0.008,0.075,13,,,,,
-,Dry Pea,0.163 (3),0.071 (3),0.215,0.008,0.075,13,,,,,
-,Lentil,0.305 (3),0.059 (3),0.239,0.008,0.075,13,,,,,
-,Fababean,0.2,0.099,0.224,0.008,0.085,13,,,,,
-,White Beans,0.279,0.046,0.223,0.008,0.075,13,,,,,
-,Other (dry field) Beans,0.279,0.046,0.223,0.008,0.075,13,,,,,
-,,,,,,,
-Root crops,Potatos,0.795,0,0.097,0.0169,0.073,75,,,,,
-,Sugar Beets,0.925,0,0.097,0.0169,0.073,80,,,,,
-,,,,,,,
-Other field crops,Safflower,0.197,0.078,0.246,0.008,0.073,2,,,,,
-,Sunflower seeds,0.197,0.078,0.246,0.0169,0.073,2,200,0.6,90,891,10
-,Tobacco,0.5,0,0.2,0.008,0.073,13,,,,,
-,Vegetables,-9,-9,-9,-9,-9,-9,,,,,
-,Berries and Grapes,-9,-9,-9,-9,-9,-9,,,,,
-,Other field crops,-9,-9,-9,-9,-9,-9,,,,,
-,,,,,,,
-Cover/Winter crops,Winter wheat,0.344 (3),0.015 (3),0.229,0.007,0.053,12
-,(Fall) Rye,0.344,0.015,0.229,0.007,0.053,12,241,0.44,94,880,6
-,,,,,,,
-Perennials,Rangeland (native),-9,-9,-9,0.0134,0.049,13,,,,,
-,Perennial forages,-9,-9,-9,0.0126,0.049,13,,,,,
-,Tame grass,-9,-9,-9,0.0134,0.057,13,332,0.54,82,870,15
-,Tame legume,-9,-9,-9,0.025,0.072,13,,,,,
-,Tame mixed,-9,-9,-9,0.0178,0.061,13,,,,,
-,Seeded grassland,-9,-9,-9,-9,0.049,13,,,,,
-,Forage for seed,-9,-9,-9,-9,0.049,13,,,,,
-,Alfalfa,-9,-9,-9,0.0238,0.072,13,,,,,
-,Grazed pasture (all perennial types) (7),-9,-9,-9,-9,-9,80,,,,,
-#,,,,,,,
-#,,,,,,,
-#,,,,,,,"1 Values for the N content of residues from IPCC (2019), Table 5.5B. The estimates are in units of g N (g residue)-1 on dry weight basis from a biomass-weighted average of aboveground and belowground for each crop based on data in IPCC (2019), Table 11.1a."
-#,,,,,,,"2 Values for the lignin content of residues from IPCC (2019), Table 5.5B. Winter wheat, spring wheat, barley, oats, millet, beans and pulses, soybeans, peanuts, values from Equi-Analytical Laboratories (2018); maize, rice, and sorghum from Cornell University (2017); and potatoes and tubers from Zereu et al. (2014)."
-#,,,,,,,3 Thiagarajan et al. (2018)
-#,,,,,,,4 Simple average of nitrogen content of aboveground and belowground.
-#,,,,,,,5 Nitrogen content of aboveground assumed to represent all residue.
-#,,,,,,,6 Value is an average of N fixing and non-N fixing grasses.
-#,,,,,,,7 Approximate mid-point of values from www.ontario.ca (75% MC in dry year, 80% MC in normal year, 85% MC in wet year), madbarn.ca (70-80% MC) and fieldcropnews.com (70-85% MC)
-#,,,,,,,"Notes: Uncertainty is assumed to be ±75% for the N content estimates and ±50% for the lignin content estimates, expressed as 95% confidence intervals."

pyholos/resources/holos/Table_Tillage_Factor.csv

@@ -1,13 +0,0 @@
-# This table was automatically generated using "main_tables.py"
-# Holos source code: https://github.com/holos-aafc/Holos/blob/e644d8e52446faefe3d7503565a723563bba61fe/H.Core/Calculators/Tillage/TillageFactorCalculator.cs#L27
-#
-SoilFunctionalCategory,TillageType,TillageFactor
-Brown,Intensive,1.0
-Brown,Reduced,0.9
-Brown,NoTill,0.8
-DarkBrown,Intensive,1.0
-DarkBrown,Reduced,0.85
-DarkBrown,NoTill,0.7
-Black,Intensive,1.0
-Black,Reduced,0.8
-Black,NoTill,0.6