pyfemtet 1.0.4__py3-none-any.whl → 1.0.6__py3-none-any.whl
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- pyfemtet/_i18n/locales/ja/LC_MESSAGES/messages.mo +0 -0
- pyfemtet/_i18n/locales/ja/LC_MESSAGES/messages.po +2 -2
- pyfemtet/opt/femopt.py +9 -0
- pyfemtet/opt/history/_history.py +108 -11
- pyfemtet/opt/optimizer/_base_optimizer.py +50 -8
- pyfemtet/opt/optimizer/optuna_optimizer/_pof_botorch/enable_nonlinear_constraint.py +4 -2
- pyfemtet/opt/optimizer/optuna_optimizer/_pof_botorch/pof_botorch_sampler.py +63 -11
- pyfemtet/opt/prediction/_botorch_utils.py +59 -2
- pyfemtet/opt/prediction/_model.py +2 -2
- pyfemtet/opt/problem/problem.py +9 -0
- pyfemtet/opt/problem/variable_manager/_variable_manager.py +1 -1
- pyfemtet/opt/visualization/history_viewer/_complex_components/detail_graphs.py +551 -0
- pyfemtet/opt/visualization/history_viewer/_detail_page.py +106 -0
- pyfemtet/opt/visualization/history_viewer/_process_monitor/_application.py +3 -2
- pyfemtet/opt/visualization/history_viewer/result_viewer/_application.py +3 -2
- pyfemtet/opt/visualization/history_viewer/result_viewer/_pages.py +1 -0
- pyfemtet/opt/visualization/plotter/contour_creator.py +105 -0
- pyfemtet/opt/visualization/plotter/parallel_plot_creator.py +33 -0
- pyfemtet/opt/visualization/plotter/pm_graph_creator.py +7 -7
- {pyfemtet-1.0.4.dist-info → pyfemtet-1.0.6.dist-info}/METADATA +1 -1
- {pyfemtet-1.0.4.dist-info → pyfemtet-1.0.6.dist-info}/RECORD +25 -21
- {pyfemtet-1.0.4.dist-info → pyfemtet-1.0.6.dist-info}/LICENSE +0 -0
- {pyfemtet-1.0.4.dist-info → pyfemtet-1.0.6.dist-info}/LICENSE_THIRD_PARTY.txt +0 -0
- {pyfemtet-1.0.4.dist-info → pyfemtet-1.0.6.dist-info}/WHEEL +0 -0
- {pyfemtet-1.0.4.dist-info → pyfemtet-1.0.6.dist-info}/entry_points.txt +0 -0
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from __future__ import annotations
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# dash components
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from pyfemtet.opt.visualization.history_viewer._wrapped_components import dcc, dbc, html
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# dash callback
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from dash import Output, Input, callback_context
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from dash.exceptions import PreventUpdate
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from pyfemtet.logger import get_module_logger
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from pyfemtet.opt.history import MAIN_FILTER
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from pyfemtet.opt.visualization.history_viewer._base_application import AbstractPage
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from pyfemtet.opt.visualization.history_viewer._complex_components.detail_graphs import (
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ParallelPlot,
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ContourPlot,
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ImportancePlot,
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SlicePlot,
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HistoryPlot,
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)
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class DetailPage(AbstractPage):
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location: dcc.Location
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alerts: html.Div
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parallel_plot: ParallelPlot
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contour_plot: ContourPlot
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importance_plot: ImportancePlot
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slice_plot: SlicePlot
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history_plot: HistoryPlot
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def setup_component(self):
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self.location = dcc.Location(id='new-detail-location', refresh=True)
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# alerts
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self.alerts = html.Div(id='new-detail-alerts')
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# graphs
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self.parallel_plot = ParallelPlot(location=self.location)
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self.add_subpage(self.parallel_plot)
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self.contour_plot = ContourPlot(location=self.location)
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self.add_subpage(self.contour_plot)
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self.importance_plot = ImportancePlot(location=self.location)
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self.add_subpage(self.importance_plot)
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self.slice_plot = SlicePlot(location=self.location)
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self.add_subpage(self.slice_plot)
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self.history_plot = HistoryPlot(location=self.location)
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self.add_subpage(self.history_plot)
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def setup_layout(self):
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# title
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title = html.H1('Detail Plot Graphs')
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# layout
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self.layout = dbc.Container([
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dbc.Row([self.location]),
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dbc.Row([title]),
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dbc.Row([html.Hr()]),
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dbc.Row([self.alerts]),
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dbc.Row([self.importance_plot.layout]),
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dbc.Row([self.history_plot.layout]),
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dbc.Row([self.slice_plot.layout]),
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dbc.Row([self.contour_plot.layout]),
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dbc.Row([self.parallel_plot.layout]),
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])
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def setup_callback(self):
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super().setup_callback() # setup callback of subpages
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app = self.application.app
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# ===== update alert =====
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@app.callback(
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Output(self.alerts.id, 'children'),
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Input(self.location.id, 'pathname'), # on page load
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)
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def update_alerts_new_detail(_):
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logger = get_module_logger(
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'opt.update_alerts_new_detail',
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debug=False,
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)
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# ----- preconditions -----
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if callback_context.triggered_id is None:
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logger.debug('PreventUpdate. No trigger.')
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raise PreventUpdate
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if self.application is None:
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logger.debug('PreventUpdate. No application.')
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raise PreventUpdate
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if self.application.history is None:
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logger.debug('PreventUpdate. No history.')
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return [dbc.Alert('No history.', color='danger')]
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# df = self.application.get_df()
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main_df = self.application.get_df(MAIN_FILTER)
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if len(main_df) == 0:
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logger.debug('PreventUpdate. No df.')
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return [dbc.Alert('No data.', color='danger')]
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return []
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@@ -11,6 +11,7 @@ from pyfemtet.opt.worker_status import *
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from pyfemtet.opt.visualization.history_viewer._base_application import *
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from pyfemtet.opt.visualization.history_viewer._common_pages import *
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from pyfemtet.opt.visualization.history_viewer._process_monitor._pages import *
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from pyfemtet.opt.visualization.history_viewer._detail_page import DetailPage
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from pyfemtet._i18n import Msg
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@@ -159,12 +160,12 @@ def process_monitor_main(history, status, worker_addresses, worker_names, worker
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g_home_page = HomePage(Msg.PAGE_TITLE_PROGRESS, '/', g_application)
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g_rsm_page = PredictionModelPage(Msg.PAGE_TITLE_PREDICTION_MODEL, '/prediction-model', g_application)
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g_optuna = OptunaVisualizerPage(Msg.PAGE_TITLE_OPTUNA_VISUALIZATION, '/optuna', g_application)
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g_worker_page = WorkerPage(Msg.PAGE_TITLE_WORKERS, '/workers', g_application)
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g_detail = DetailPage(Msg.PAGE_TITLE_OPTUNA_VISUALIZATION, '/detail', g_application)
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g_application.add_page(g_home_page, 0)
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g_application.add_page(g_rsm_page, 1)
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g_application.add_page(
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g_application.add_page(g_detail, 2)
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g_application.add_page(g_worker_page, 3)
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g_application.setup_callback()
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from pyfemtet.opt.visualization.history_viewer._base_application import *
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from pyfemtet.opt.visualization.history_viewer._common_pages import *
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from pyfemtet.opt.visualization.history_viewer.result_viewer._pages import *
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from pyfemtet.opt.visualization.history_viewer._detail_page import DetailPage
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from pyfemtet._i18n import Msg
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g_home_page = HomePage(Msg.PAGE_TITLE_RESULT)
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g_rsm_page = PredictionModelPage(Msg.PAGE_TITLE_PREDICTION_MODEL, '/prediction-model', g_application)
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g_detail = DetailPage(Msg.PAGE_TITLE_OPTUNA_VISUALIZATION, '/detail', g_application)
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g_application.add_page(g_home_page, 0)
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g_application.add_page(g_rsm_page, 1)
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g_application.add_page(
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g_application.add_page(g_detail, 2)
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g_application.setup_callback()
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g_application.run()
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@@ -722,6 +722,7 @@ class Tutorial(AbstractPage):
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parameters=history._records.column_manager.parameters,
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obj_names=history.obj_names,
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cns_names=history.cns_names,
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other_output_names=history.other_output_names,
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sub_fidelity_names=history.sub_fidelity_names,
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additional_data=additional_data,
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)
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import pandas as pd
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import plotly.graph_objects as go
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from plotly.subplots import make_subplots
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from pyfemtet.logger import get_module_logger
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__all__ = [
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'contour_creator',
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]
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def contour_creator(df: pd.DataFrame) -> go.Figure | str:
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logger = get_module_logger('opt.contour_creator')
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target_column = tuple(df.columns)[-1]
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explain_columns = [column for column in df.columns if column != target_column]
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subplots = make_subplots(
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rows=len(explain_columns),
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cols=len(explain_columns),
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shared_xaxes=True,
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shared_yaxes=True,
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row_titles=explain_columns,
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column_titles=explain_columns,
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start_cell='bottom-left',
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)
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is_first = True
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for r, r_key in enumerate(explain_columns):
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for c, c_key in enumerate(explain_columns):
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r_dtype = df.dtypes[r_key]
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c_dtype = df.dtypes[c_key]
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if not ('float' in r_dtype.name or 'int' in r_dtype.name):
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logger.error(f'dtype is {r_dtype}. Not implemented.')
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return 'Not implemented: including categorical parameters.'
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if not ('float' in c_dtype.name or 'int' in c_dtype.name):
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logger.error(f'dtype is {c_dtype}. Not implemented.')
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return 'Not implemented: including categorical parameters.'
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x = df[c_key]
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y = df[r_key]
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z = df[target_column]
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scatter = go.Scatter(
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x=x, y=y, mode='markers',
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marker=go.scatter.Marker(
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symbol='circle',
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color='black',
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size=5,
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line=dict(
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color='white',
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width=1,
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)
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),
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name='points (click to switch visibility)',
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legendgroup='points (click to switch visibility)',
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showlegend=is_first,
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)
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is_first = False
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if r == c:
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pass
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else:
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contour = go.Contour(
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x=x, y=y, z=z,
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connectgaps=True,
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name=f'contour of\n{target_column}',
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colorscale='Turbo',
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)
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subplots.add_trace(contour, row=r + 1, col=c + 1)
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subplots.add_trace(scatter, row=r + 1, col=c + 1)
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subplots.update_layout(
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legend=dict(
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orientation='h',
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xanchor='center',
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x=0.5,
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yanchor='bottom',
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y=-0.2,
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bgcolor='rgba(0, 0, 0, 0.15)',
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),
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# margin=dict(b=50),
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)
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return subplots
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if __name__ == '__main__':
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import numpy as np
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contour_creator(pd.DataFrame(dict(
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x1=np.random.rand(20),
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x2=np.random.rand(20),
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x3=np.random.rand(20),
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x4=np.random.rand(20),
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y=np.random.rand(20),
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))).show()
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import plotly.graph_objects as go
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import plotly.express as px
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from pyfemtet.logger import get_module_logger
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__all__ = [
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'parallel_plot',
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def parallel_plot(df: pd.DataFrame) -> go.Figure | str:
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logger = get_module_logger('opt.parallel_plot')
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if any([
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not ('float' in dtype.name or 'int' in dtype.name)
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for dtype in df.dtypes.values
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]):
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logger.error('Not implemented: including categorical parameters.')
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# fig = px.parallel_categories()
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fig = 'Not implemented: including categorical parameters.'
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else:
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fig = px.parallel_coordinates(
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df,
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dimensions=df.columns,
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