pyegeria 5.3.9.9.3__py3-none-any.whl → 5.3.9.9.4__py3-none-any.whl

md_processing/dr_egeria_outbox/processed-2025-05-19 07:14-data_test.md

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+
+
+
+
+
+
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+
+# Update Collection Form - created at 2025-05-19 07:14
+	 Collection found from the search string:  `<class 'filter'>`
+
+# Update Collection
+
+## Collection Name 
+
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+## Description
+Principle data requirements for Teddy Bear Drop Foot Clinical Trial.
+
+## Qualified Name
+DataSpec::Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+## Classifications
+
+
+## Collection Type
+Data Specification
+
+## Guid
+1f5a7c95-9f12-41d1-83f6-2078e8b15978
+
+
+# foo Create Data Dictionary
+## Name
+Clinical Trial Data Dictionary
+
+## Description
+A data dictionary for clinical trial data elements.
+
+
+
+
+___
+
+
+
+TBDF-Incoming Weekly Measurement Data
+
+#  foo Create Data Structure
+
+## Data Structure
+
+TBDF-Incoming Weekly Measurement Data
+
+## Description
+This describes the weekly measurement data for each patient for the Teddy Bear drop foot clinical trial
+
+## In Data Specification
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+
+## Qualified Name
+
+
+___
+
+WWT-Incoming Weekly Measurement Data
+
+# foo Create Data Structure
+
+## Qualified Name
+DataStruct::WWT-Incoming Weekly Measurement Data
+
+## GUID
+ae221834-a3a6-4f32-ac94-110dff761b49
+
+## Data Structure
+
+WWT-Incoming Weekly Measurement Data
+
+
+##  Description
+A collection of data fields that form a data structure.
+
+
+##  In Data Specification
+
+
+
+##  Qualified Name
+
+# Provenance
+
+* Results from processing file data_test.md on 2025-05-19 07:14

md_processing/dr_egeria_outbox/processed-2025-05-19 07:20-data_test.md

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+
+
+
+
+
+
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+# foo Create Data Specification
+
+## Data Specification
+
+
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+>woof
+##  Description
+>Meow -
+
+Principle data requirements for Teddy Bear Drop Foot Clinical Trial.
+
+
+
+
+
+# Update Collection Form - created at 2025-05-19 07:20
+	 Collection found from the search string:  `<class 'filter'>`
+
+# Update Collection
+
+## Collection Name 
+
+Clinical Trial Data Dictionary
+
+## Description
+A data dictionary for clinical trial data elements.
+
+## Qualified Name
+DataDict::Clinical Trial Data Dictionary
+
+## Classifications
+
+
+## Collection Type
+Data Dictionary
+
+## Guid
+81edea89-0ae5-4729-86fe-0e4ed61aef9f
+
+
+
+
+
+TBDF-Incoming Weekly Measurement Data
+
+#  foo Create Data Structure
+
+## Data Structure
+
+TBDF-Incoming Weekly Measurement Data
+
+## Description
+This describes the weekly measurement data for each patient for the Teddy Bear drop foot clinical trial
+
+## In Data Specification
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+
+## Qualified Name
+
+
+___
+
+WWT-Incoming Weekly Measurement Data
+
+# foo Create Data Structure
+
+## Qualified Name
+DataStruct::WWT-Incoming Weekly Measurement Data
+
+## GUID
+ae221834-a3a6-4f32-ac94-110dff761b49
+
+## Data Structure
+
+WWT-Incoming Weekly Measurement Data
+
+
+##  Description
+A collection of data fields that form a data structure.
+
+
+##  In Data Specification
+
+
+
+##  Qualified Name
+
+# Provenance
+
+* Results from processing file data_test.md on 2025-05-19 07:20

md_processing/dr_egeria_outbox/processed-2025-05-19 07:22-data_test.md

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+
+
+
+
+
+
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+# foo Create Data Specification
+
+## Data Specification
+
+
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+>woof
+##  Description
+>Meow -
+
+Principle data requirements for Teddy Bear Drop Foot Clinical Trial.
+
+
+
+
+# foo Create Data Dictionary
+## Name
+Clinical Trial Data Dictionary
+
+## Description
+A data dictionary for clinical trial data elements.
+
+
+
+
+___
+
+
+
+TBDF-Incoming Weekly Measurement Data
+
+# Update Data Structure
+
+## GUID
+3eb5d206-6d3f-4b61-8f45-d7fbc05a870e
+
+## Data Structure
+
+TBDF-Incoming Weekly Measurement Data
+
+## Description
+This describes the weekly measurement data for each patient for the Teddy Bear drop foot clinical trial
+
+## In Data Specification
+Data Specification for the Teddy Bear Drop Foot Clinical Trial
+
+
+## Qualified Name
+
+
+___
+
+WWT-Incoming Weekly Measurement Data
+
+# foo Create Data Structure
+
+## Qualified Name
+DataStruct::WWT-Incoming Weekly Measurement Data
+
+## GUID
+ae221834-a3a6-4f32-ac94-110dff761b49
+
+## Data Structure
+
+WWT-Incoming Weekly Measurement Data
+
+
+##  Description
+A collection of data fields that form a data structure.
+
+
+##  In Data Specification
+
+
+
+##  Qualified Name
+
+# Provenance
+
+* Results from processing file data_test.md on 2025-05-19 07:22

md_processing/md_commands/__init__.py

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+"""
+This package contains object_action-specific functions for processing Egeria Markdown
+"""

md_processing/md_commands/blueprint_commands.py

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+"""
+This file contains blueprint/solution-related object_action functions for processing Egeria Markdown
+"""
+from typing import Optional
+
+from rich.markdown import Markdown
+
+from pyegeria.egeria_tech_client import EgeriaTech
+from md_processing.md_processing_utils.common_md_utils import (
+    debug_level, print_msg, update_element_dictionary
+)
+from md_processing.md_processing_utils.extraction_utils import (
+    extract_command_plus, process_simple_attribute, process_name_list, process_element_identifiers, update_a_command
+)
+
+from md_processing.md_processing_utils.md_processing_constants import (
+    BLUEPRINT_NAME_LABELS, COMPONENT_NAME_LABELS, ALWAYS, ERROR, INFO, pre_command, EXISTS_REQUIRED,
+    )
+
+def process_blueprint_upsert_command(egeria_client: EgeriaTech, txt: str, directive: str = "display") -> Optional[str]:
+    """
+    Processes a solution blueprint create or update object_action by extracting key attributes such as
+    blueprint name, description, and usage from the given text.
+
+    :param txt: A string representing the input cell to be processed for
+        extracting blueprint-related attributes.
+    :param directive: an optional string indicating the directive to be used - display, validate or execute
+    :return: A string summarizing the outcome of the processing.
+    """
+    from md_processing.md_processing_utils.common_md_utils import set_debug_level
+    
+    command, object_type, object_action = extract_command_plus(txt)
+    set_debug_level(directive)
+
+    blueprint_name = process_simple_attribute(txt, BLUEPRINT_NAME_LABELS, ERROR)
+    print(Markdown(f"{pre_command} `{object_action}` `{object_type}` for blueprint: `\'{blueprint_name}\'` with directive: `{directive}` "))
+    description = process_simple_attribute(txt, ['Description'], INFO)
+    usage = process_simple_attribute(txt, ['Usage'], INFO)
+    q_name = process_simple_attribute(txt, ['Qualified Name'], INFO)
+    valid = True
+
+    if blueprint_name is None:
+        valid = False
+        known_q_name = None
+        known_guid = None
+        blueprint_exists = False
+    else:
+        element_labels = BLUEPRINT_NAME_LABELS
+        element_labels.append('Display Name')
+        known_q_name, known_guid, valid, blueprint_exists = process_element_identifiers(egeria_client, object_type,
+                                                                                       element_labels, txt,
+                                                                                       object_action, None)
+
+    blueprint_display = (f"\n* Command: `{command}`\n\t* Blueprint Name: {blueprint_name}\n\t"
+                        f"* Description: {description}\n\t* Usage: {usage}\n")
+
+    if object_action == 'Update':
+        guid = process_simple_attribute(txt, ['GUID', 'guid', 'Guid'])
+        blueprint_display += f"* Qualified Name: `{q_name}`\n\t* GUID: {guid}\n\n"
+        if not blueprint_exists:
+            msg = f"Blueprint can't be updated; `{blueprint_name}` not found"
+            print_msg("ERROR", msg, debug_level)
+            valid = False
+        else:
+            msg = f"Blueprint can be updated; `{blueprint_name}` found"
+            print_msg(ALWAYS, msg, debug_level)
+
+    elif object_action == "Create":
+        if blueprint_exists:
+            msg = f"Blueprint `{blueprint_name}` can't be created because it already exists.\n"
+            print_msg("ERROR", msg, debug_level)
+            valid = False
+        elif valid:
+            msg = f"It is valid to create Blueprint `{blueprint_name}` with:\n"
+            print_msg("ALWAYS", msg, debug_level)
+
+    if directive == "display":
+        print(Markdown(blueprint_display))
+        return None
+
+    elif directive == "validate":
+        if valid:
+            print(Markdown(blueprint_display))
+        else:
+            msg = f"Validation failed for Blueprint `{blueprint_name}`\n"
+            print_msg(ERROR, msg, debug_level)
+            print(Markdown(blueprint_display))
+
+        return valid
+
+    elif directive == "process":
+        if valid:
+            print(Markdown(blueprint_display))
+        else:
+            if blueprint_exists and object_action == "Create":
+                msg = f"Create failed because blueprint `{blueprint_name}` exists - changing `Create` to `Update` in processed output \n"
+                print_msg(ERROR, msg, debug_level)
+                print(Markdown(blueprint_display))
+                return update_a_command(txt, object_action, object_type, known_q_name, known_guid)
+            else:
+                return None
+
+        if object_action == "Update":
+            if not blueprint_exists:
+                print(f"\n{ERROR}Blueprint `{blueprint_name}` does not exist! Updating result document with Create "
+                      f"object_action\n")
+                return update_a_command(txt, object_action, object_type, known_q_name, known_guid)
+
+            body = {
+                "class": "ReferenceableRequestBody", "elementProperties": {
+                    "class": "SolutionBlueprintProperties", "qualifiedName": known_q_name, "description": description,
+                    "usage": usage
+                    }
+                }
+            egeria_client.update_solution_blueprint(known_guid, body)
+            print_msg(ALWAYS, f"Updated Blueprint `{blueprint_name}` with GUID {known_guid}", debug_level)
+            update_element_dictionary(known_q_name, {
+                'guid': known_guid, 'display_name': blueprint_name
+                })
+            return egeria_client.get_solution_blueprint_by_guid(known_guid, output_format='MD')
+
+        elif object_action == "Create":
+            if blueprint_exists:
+                print(f"\nBlueprint `{blueprint_name}` already exists and result document updated\n")
+                return update_a_command(txt, object_action, object_type, known_q_name, known_guid)
+            else:
+                blueprint_guid = egeria_client.create_solution_blueprint(blueprint_name, description, usage)
+                if blueprint_guid:
+                    print_msg(ALWAYS, f"Created Blueprint `{blueprint_name}` with GUID {blueprint_guid}", debug_level)
+                    return egeria_client.get_solution_blueprint_by_guid(blueprint_guid, output_format='MD')
+                else:
+                    print_msg(ERROR, f"Failed to create Blueprint `{blueprint_name}`", debug_level)
+                    return None
+
+
+def process_solution_component_upsert_command(egeria_client: EgeriaTech, txt: str, directive: str = "display") -> Optional[str]:
+    """
+    Processes a solution component create or update object_action by extracting key attributes such as
+    component name, description, and parent components from the given text.
+
+    :param txt: A string representing the input cell to be processed for
+        extracting component-related attributes.
+    :param directive: an optional string indicating the directive to be used - display, validate or execute
+    :return: A string summarizing the outcome of the processing.
+    """
+    from md_processing.md_processing_utils.common_md_utils import set_debug_level
+    
+    command, object_type, object_action = extract_command_plus(txt)
+    set_debug_level(directive)
+
+    component_name = process_simple_attribute(txt, COMPONENT_NAME_LABELS, ERROR)
+    print(Markdown(f"{pre_command} `{object_action}` `{object_type}` for component: `\'{component_name}\'` with directive: `{directive}` "))
+    description = process_simple_attribute(txt, ['Description'], INFO)
+    q_name = process_simple_attribute(txt, ['Qualified Name'], INFO)
+    valid = True
+
+    if component_name is None:
+        valid = False
+        known_q_name = None
+        known_guid = None
+        component_exists = False
+    else:
+        element_labels = COMPONENT_NAME_LABELS
+        element_labels.append('Display Name')
+        known_q_name, known_guid, valid, component_exists = process_element_identifiers(egeria_client, object_type,
+                                                                                       element_labels, txt,
+                                                                                       object_action, None)
+
+    # Get the blueprint this component is in
+    blueprint_name = process_simple_attribute(txt, BLUEPRINT_NAME_LABELS)
+    if blueprint_name:
+        known_blueprint_q_name, known_blueprint_guid, blueprint_valid, blueprint_exists = process_element_identifiers(
+            egeria_client, "Solution Blueprint", BLUEPRINT_NAME_LABELS, txt, EXISTS_REQUIRED, None)
+        if not blueprint_exists:
+            valid = False
+    else:
+        known_blueprint_q_name = None
+        known_blueprint_guid = None
+        blueprint_valid = True
+        blueprint_exists = False
+
+    # Get the parent components if specified
+    parent_components = process_simple_attribute(txt, ['Parent Components', 'Parent Component'])
+    if parent_components:
+        parent_components_list, parent_q_name_list, parents_valid, parents_exist = process_name_list(
+            egeria_client, 'Solution Components', txt, COMPONENT_NAME_LABELS)
+        if not parents_exist:
+            valid = False
+    else:
+        parent_components_list = None
+        parent_q_name_list = None
+        parents_valid = True
+        parents_exist = False
+
+    component_display = (f"\n* Command: `{command}`\n\t* Component Name: {component_name}\n\t"
+                        f"* Blueprint: {blueprint_name}\n\t* Parent Components: {parent_components}\n\t"
+                        f"* Description: {description}\n")
+
+    if object_action == 'Update':
+        guid = process_simple_attribute(txt, ['GUID', 'guid', 'Guid'])
+        component_display += f"* Qualified Name: `{q_name}`\n\t* GUID: {guid}\n\n"
+        if not component_exists:
+            msg = f"Component can't be updated; `{component_name}` not found"
+            print_msg("ERROR", msg, debug_level)
+            valid = False
+        else:
+            msg = f"Component can be updated; `{component_name}` found"
+            print_msg(ALWAYS, msg, debug_level)
+
+    elif object_action == "Create":
+        if component_exists:
+            msg = f"Component `{component_name}` can't be created because it already exists.\n"
+            print_msg("ERROR", msg, debug_level)
+            valid = False
+        elif valid:
+            msg = f"It is valid to create Component `{component_name}` with:\n"
+            print_msg("ALWAYS", msg, debug_level)
+
+    if directive == "display":
+        print(Markdown(component_display))
+        return None
+
+    elif directive == "validate":
+        if valid:
+            print(Markdown(component_display))
+        else:
+            msg = f"Validation failed for Component `{component_name}`\n"
+            print_msg(ERROR, msg, debug_level)
+            print(Markdown(component_display))
+
+        return valid
+
+    elif directive == "process":
+        if valid:
+            print(Markdown(component_display))
+        else:
+            if component_exists and object_action == "Create":
+                msg = f"Create failed because component `{component_name}` exists - changing `Create` to `Update` in processed output \n"
+                print_msg(ERROR, msg, debug_level)
+                print(Markdown(component_display))
+                return update_a_command(txt, object_action, object_type, known_q_name, known_guid)
+            else:
+                return None
+
+        if object_action == "Update":
+            if not component_exists:
+                print(f"\n{ERROR}Component `{component_name}` does not exist! Updating result document with Create "
+                      f"object_action\n")
+                return update_a_command(txt, object_action, object_type, known_q_name, known_guid)
+
+            body = {
+                "class": "ReferenceableRequestBody", "elementProperties": {
+                    "class": "SolutionComponentProperties", "qualifiedName": known_q_name, "description": description
+                    }
+                }
+            egeria_client.update_solution_component(known_guid, body)
+            print_msg(ALWAYS, f"Updated Component `{component_name}` with GUID {known_guid}", debug_level)
+            update_element_dictionary(known_q_name, {
+                'guid': known_guid, 'display_name': component_name
+                })
+
+            # Update parent components if specified
+            if parent_components and parents_exist and parents_valid:
+                # Get the current parent components
+                component_details = egeria_client.get_solution_component_by_guid(known_guid)
+                current_parents = []
+                if 'parentComponents' in component_details:
+                    for parent in component_details['parentComponents']:
+                        current_parents.append(parent.get('guid', None))
+                
+                # Add new parent components
+                for parent in parent_q_name_list:
+                    if parent not in current_parents:
+                        egeria_client.add_parent_component(parent, known_guid)
+                        print_msg(INFO, f"Added parent component to {component_name}", debug_level)
+                
+                # Remove parent components that are not in the new list
+                for parent in current_parents:
+                    if parent not in parent_q_name_list:
+                        egeria_client.remove_parent_component(parent, known_guid)
+                        print_msg(INFO, f"Removed parent component from {component_name}", debug_level)
+
+            return egeria_client.get_solution_component_by_guid(known_guid, output_format='MD')
+
+        elif object_action == "Create":
+            if component_exists:
+                print(f"\nComponent `{component_name}` already exists and result document updated\n")
+                return update_a_command(txt, object_action, object_type, known_q_name, known_guid)
+            else:
+                component_guid = egeria_client.create_solution_component(component_name, description, known_blueprint_guid)
+                if component_guid:
+                    print_msg(ALWAYS, f"Created Component `{component_name}` with GUID {component_guid}", debug_level)
+                    
+                    # Add parent components if specified
+                    if parent_components and parents_exist and parents_valid:
+                        for parent in parent_q_name_list:
+                            egeria_client.add_parent_component(parent, component_guid)
+                            print_msg(INFO, f"Added parent component to {component_name}", debug_level)
+                    
+                    return egeria_client.get_solution_component_by_guid(component_guid, output_format='MD')
+                else:
+                    print_msg(ERROR, f"Failed to create Component `{component_name}`", debug_level)
+                    return None