pyegeria 5.3.3.13.dev4__py3-none-any.whl → 5.3.3.14.dev1__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- pyegeria/mermaid_utilities.py +14 -7
- {pyegeria-5.3.3.13.dev4.dist-info → pyegeria-5.3.3.14.dev1.dist-info}/METADATA +1 -1
- {pyegeria-5.3.3.13.dev4.dist-info → pyegeria-5.3.3.14.dev1.dist-info}/RECORD +6 -15
- pyegeria/commands/tech/work/mermaid_graphs/Clinical Trial Subject Onboarding.html +0 -135
- pyegeria/commands/tech/work/mermaid_graphs/Clinical Trial Treatment Validation.html +0 -215
- pyegeria/commands/tech/work/mermaid_graphs/Employee Expense Payment.html +0 -126
- pyegeria/commands/tech/work/mermaid_graphs/New Drug Product Information Distribution.html +0 -141
- pyegeria/commands/tech/work/mermaid_graphs/New Employee Onboarding.html +0 -138
- pyegeria/commands/tech/work/mermaid_graphs/Personalized Treatment Ordering.html +0 -143
- pyegeria/commands/tech/work/mermaid_graphs/Physical Inventory Tracking.html +0 -178
- pyegeria/commands/tech/work/mermaid_graphs/Sustainability Reporting.html +0 -203
- pyegeria/commands/tech/work/mermaid_graphs/{{displayName}}.html +0 -115
- {pyegeria-5.3.3.13.dev4.dist-info → pyegeria-5.3.3.14.dev1.dist-info}/LICENSE +0 -0
- {pyegeria-5.3.3.13.dev4.dist-info → pyegeria-5.3.3.14.dev1.dist-info}/WHEEL +0 -0
- {pyegeria-5.3.3.13.dev4.dist-info → pyegeria-5.3.3.14.dev1.dist-info}/entry_points.txt +0 -0
pyegeria/mermaid_utilities.py
CHANGED
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@@ -80,17 +80,21 @@ def render_mermaid(mermaid_code):
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def parse_mermaid_code(mermaid_code):
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parts = mermaid_code.split('---', maxsplit=3)
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if len(parts) == 3:
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-
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full_title = parts[1].strip()
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title = full_title.split('[')[0]
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guid = full_title.split('[')[1].split(']')[0]
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mermaid_code = parts[2].strip()
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else:
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title = "No Title"
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guid = "No GUID"
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return title, guid, mermaid_code
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def construct_mermaid_html(mermaid_str: str) -> str:
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"""Function to display a HTML code in a Jupyter notebook"""
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title_label, guid, mermaid_code = parse_mermaid_code(mermaid_str)
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html_section1 = """
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<!DOCTYPE html>
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<html>
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<head>
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<style type="text/css">
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@@ -109,8 +113,11 @@ def construct_mermaid_html(mermaid_str: str) -> str:
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</style>
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</head>
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"""
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html_section2 = """
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<title>{
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html_section2 = f"""
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<title>{title_label}</title>
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<h3 style="text-align: center;">{title_label}</h3>
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GUID : {guid}
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"""
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html_section3 = """
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<body>
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@@ -147,7 +154,7 @@ def construct_mermaid_html(mermaid_str: str) -> str:
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const graphDefinition = `
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"""
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html_section4 = """`;
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html_section4 = r"""`;
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const {svg} = await mermaid.render('mySvgId', graphDefinition);
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element.innerHTML = svg.replace(/( )*max-width:( 0-9\.)*px;/i, '');
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@@ -281,7 +288,7 @@ def save_mermaid_graph(title, mermaid_str, folder:str = EGERIA_MERMAID_FOLDER):
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const graphDefinition = `
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"""
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html_postfix = """`;
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html_postfix = r"""`;
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const {svg} = await mermaid.render('mySvgId', graphDefinition);
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element.innerHTML = svg.replace(/( )*max-width:( 0-9\.)*px;/i, '');
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@@ -208,15 +208,6 @@ pyegeria/commands/tech/list_solution_blueprints2.py,sha256=xY5JuUET3DHV_VWsdSIbt
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pyegeria/commands/tech/list_tech_templates.py,sha256=FvJ2qAHo7yoCdd9LnZtvWjd3DQEvD0P5wfz5-D5qjmw,14153
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pyegeria/commands/tech/list_valid_metadata_values.py,sha256=Mv4eSHCR_pR0llWRrpMIzNKA6_QEr8qccAv4NQv4dg0,6340
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pyegeria/commands/tech/table_tech_templates.py,sha256=kv9VWhZ6pEN-1vEjo6IprliwFTjumjdVV3IWQB2HzI4,9503
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pyegeria/commands/tech/work/mermaid_graphs/Clinical Trial Subject Onboarding.html,sha256=16mToSOApkMKXs5mEfsNXRM2A-24oOaU9LnufP1Z6yk,6072
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pyegeria/commands/tech/work/mermaid_graphs/Clinical Trial Treatment Validation.html,sha256=PVxW_d_w0f-QmAbLqAyY5NDu9kQECFnbQNZVw00do_A,11715
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pyegeria/commands/tech/work/mermaid_graphs/Employee Expense Payment.html,sha256=9qNTzdZvDzk0vkYQIBthlwt8qO5nOElolXbcqi94wgk,5240
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pyegeria/commands/tech/work/mermaid_graphs/New Drug Product Information Distribution.html,sha256=vDAS_UNqPIUKl4ow0csi-t7m7oXqZQHGcIcBgJB9g38,6375
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pyegeria/commands/tech/work/mermaid_graphs/New Employee Onboarding.html,sha256=QH4KJhtQxHlzabgGwGQpDNlSfSbTANm-FMYcGz0MPLg,6141
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pyegeria/commands/tech/work/mermaid_graphs/Personalized Treatment Ordering.html,sha256=MBG_SglrzeNXPqRXmgPVaptVIEn4VdIX_myNFMd9Hlg,6550
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pyegeria/commands/tech/work/mermaid_graphs/Physical Inventory Tracking.html,sha256=_0PgeTxnLpqHsD5lv-gzzYs1Qf_VktTgGhqKebMH8-c,9484
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pyegeria/commands/tech/work/mermaid_graphs/Sustainability Reporting.html,sha256=HqfjagnJziZT-e1jBWP2_4ceodtdq1MbNe-OYeOIEjU,10718
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pyegeria/commands/tech/work/mermaid_graphs/{{displayName}}.html,sha256=byK9OrB-elPwlF0QstNC7uzeI0vpv92Dxbnx_1N2xkc,4336
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pyegeria/commands/tech/x_list_related_elements.py,sha256=viUFq_G52CvLO_RJsgN8fkLeIF89Tb8Gvl-nNfeDPSI,5871
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pyegeria/core_omag_server_config.py,sha256=ej0oNpGelSTTm2oERS86LpgT9O9E5CZFbUm2Iek8f1E,97764
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pyegeria/create_tech_guid_lists.py,sha256=mI__-i9U01emyqQMdPK2miealwQNiZfB23iiFGmrH0g,4640
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@@ -229,7 +220,7 @@ pyegeria/feedback_manager_omvs.py,sha256=B66e3ZCaC_dirb0mcb2Nz3PYh2ZKsoMAYNOb3eu
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pyegeria/full_omag_server_config.py,sha256=k3fUfopAFAE3OKkFR7zZPiki_FYj6j2xQ4oD2SVaefQ,47350
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pyegeria/glossary_browser_omvs.py,sha256=NcitYaZJqwVODBO5zBtWpXPNUJJ3DKzEbRaOFSAyUlg,93554
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pyegeria/glossary_manager_omvs.py,sha256=tBjoHrrHJLasXoeQSpW-KpF3vEQdN_GR3jfcceTjt_c,132444
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pyegeria/mermaid_utilities.py,sha256=
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pyegeria/mermaid_utilities.py,sha256=m8v6Wog16RwMa8OPZ95Q5dSY_qeXrK-iHDF2CIeaWjA,18041
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pyegeria/metadata_explorer_omvs.py,sha256=XBg6q-JXOA8UYsT85nlpBVe4EQ6jxwj70MvE7tkVvH0,86905
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pyegeria/my_profile_omvs.py,sha256=DyECbUFEcgokrIbzdMMNljC3bqfqKGXAF2wZEpzvRYs,34666
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pyegeria/platform_services.py,sha256=CJIOYIFEbcIGwdWlApAQcXxZTsdrhFtpJcm4O3p7dG0,41646
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@@ -242,8 +233,8 @@ pyegeria/template_manager_omvs.py,sha256=Sw5xsQAhy7a48xFCg59mg9_nqyhawoS9v4WyF-P
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pyegeria/utils.py,sha256=1h6bwveadd6GpbnGLTmqPBmBk68QvxdjGTI9RfbrgKY,5415
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pyegeria/valid_metadata_omvs.py,sha256=cCt5CCLv6BdzCu90n68r_PkG_PEQJjrtwCxio7K6yko,65034
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pyegeria/x_action_author_omvs.py,sha256=xu1IQ0YbhIKi17C5a7Aq9u1Az2czwahNPpX9czmyVxE,6454
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pyegeria-5.3.3.
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pyegeria-5.3.3.
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pyegeria-5.3.3.
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pyegeria-5.3.3.
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pyegeria-5.3.3.
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pyegeria-5.3.3.14.dev1.dist-info/LICENSE,sha256=xx0jnfkXJvxRnG63LTGOxlggYnIysveWIZ6H3PNdCrQ,11357
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pyegeria-5.3.3.14.dev1.dist-info/METADATA,sha256=vRdys4w-1LV3F3rvqJa3PDBhijCUJpHm7WQJnMa4A_A,2741
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pyegeria-5.3.3.14.dev1.dist-info/WHEEL,sha256=IYZQI976HJqqOpQU6PHkJ8fb3tMNBFjg-Cn-pwAbaFM,88
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pyegeria-5.3.3.14.dev1.dist-info/entry_points.txt,sha256=cLnCR81Pm2c35hDDg7BOlQ9Mtvx5wofuvwXHnL1bGis,5956
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pyegeria-5.3.3.14.dev1.dist-info/RECORD,,
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@@ -1,135 +0,0 @@
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<html>
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<head>
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<style type="text/css">
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#mySvgId {
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width: 100%;
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height: 100%;
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overflow: hidden;
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border: 1px solid #ccc;
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position: relative;
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margin-bottom: 10px;
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}
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svg {
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cursor: grab;
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}
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</style>
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</head>
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<body>
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<script src="https://bumbu.me/svg-pan-zoom/dist/svg-pan-zoom.min.js"></script>
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<script type="module">
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import mermaid from 'https://cdn.jsdelivr.net/npm/mermaid@11/dist/mermaid.esm.min.mjs';
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mermaid.initialize({startOnLoad: false});
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await mermaid.run({
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querySelector: '.mermaid',
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postRenderCallback: (id) => {
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const container = document.getElementById("diagram-container");
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const svgElement = container.querySelector("svg");
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// Initialize Panzoom
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const panzoomInstance = Panzoom(svgElement, {
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maxScale: 5,
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minScale: 0.5,
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step: 0.1,
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});
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// Add mouse wheel zoom
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container.addEventListener("wheel", (event) => {
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});
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const drawDiagram = async function () {
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const element = document.querySelector('#graphDiv');
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const graphDefinition = `
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flowchart TD
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%%{init: {"flowchart": {"htmlLabels": false}} }%%
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39a035f0-3b2b-45fe-adb8-ee8a19581f6a@{ shape: flip-tri, label: "*Information Supply Chain*
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**Clinical Trial Subject Onboarding**"}
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b5691fb0-7569-43c1-bd4c-11198a11e733@{ shape: text, label: "*Description*
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**Delivering the data necessary to add a person as a subject in a clinical trial.**"}
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39a035f0-3b2b-45fe-adb8-ee8a19581f6a~~~b5691fb0-7569-43c1-bd4c-11198a11e733
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2338ad35-78eb-4920-8003-d522b3cecf6b@{ shape: text, label: "*Purpose*
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**Ensure patient subject is aware of the process and potential risks in participation.**"}
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9f146a62-59f4-482b-8384-48b20ca76fa3@{ shape: text, label: "*Purpose*
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**Ensure patient subject has given permission for Coco Pharmaceuticals to acquire, store and process their personal data needed for the clinical trial.**"}
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bd1d332d-6e86-4953-8f83-b0a03b5e738c@{ shape: text, label: "*Purpose*
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**Ensure incoming data is validated and catalogued.**"}
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**Ensure data and process owners are informed of key milestones and issues requiring attention.**"}
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**Ensure the process of data capture and validation is transparent and auditable.**"}
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style 39a035f0-3b2b-45fe-adb8-ee8a19581f6a color:#FFFFFF, fill:#004563, stroke:#b7c0c7
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style 1fd73811-9f3d-4599-9a22-1300e0931eff color:#000000, fill:#F9F7ED, stroke:#b7c0c7
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style b5691fb0-7569-43c1-bd4c-11198a11e733 color:#000000, fill:#F9F7ED, stroke:#b7c0c7
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style 9f146a62-59f4-482b-8384-48b20ca76fa3 color:#000000, fill:#F9F7ED, stroke:#b7c0c7
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style 2338ad35-78eb-4920-8003-d522b3cecf6b color:#000000, fill:#F9F7ED, stroke:#b7c0c7
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style bd1d332d-6e86-4953-8f83-b0a03b5e738c color:#000000, fill:#F9F7ED, stroke:#b7c0c7`;
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%%{init: {"flowchart": {"htmlLabels": false}} }%%
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1f71e403-1187-4f03-a1dd-ae7dc105f06f@{ shape: flip-tri, label: "*Information Supply Chain*
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**Clinical Trial Treatment Validation**"}
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1f71e403-1187-4f03-a1dd-ae7dc105f06f~~~c5135483-a30c-4dfc-8729-54d306b0d2cc
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25ca6519-ef83-4789-a8a9-ef08e8d195a0@{ shape: text, label: "*Purpose*
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2e6b651b-1235-411d-87f7-5bbb25e91057@{ shape: text, label: "*Purpose*
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**Ensure data and process owners are informed of key milestones and issues requiring attention.**"}
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68c30b1a-d716-4a34-b656-7b53f21e0d38~~~2e6b651b-1235-411d-87f7-5bbb25e91057
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**Ensure the process of data capture and treatment validation is transparent and auditable.**"}
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2e6b651b-1235-411d-87f7-5bbb25e91057~~~ded87798-758f-4cc2-895f-95467009fe41
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baf2f019-afff-487d-9a40-4fcdce8f8b84@{ shape: text, label: "*Purpose*
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**Ensure the treatment validation report is complete and regulatory compliant.**"}
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ded87798-758f-4cc2-895f-95467009fe41~~~baf2f019-afff-487d-9a40-4fcdce8f8b84
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**Weekly Measurements Onboarding**"}
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[Information Supply Chain Link]"|7edca02c-e726-4570-815c-280bdf5498b9
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e4303326-e418-4f77-b8e7-fd5d34717594@{ shape: hex, label: "*Information Supply Chain Segment*
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**Assess Treatment under Trial**"}
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[Information Supply Chain Link]"|4fc47e60-f1b5-469c-b666-e1f4570e749f
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04ae768e-3816-47bc-bddb-c9ae25018684@{ shape: hex, label: "*Information Supply Chain Segment*
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**Hospital Delivers Patient Weekly Readings**"}
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[Information Supply Chain Link]"|38635d38-f728-400d-a8ec-7c26e68b7c0f
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4fc47e60-f1b5-469c-b666-e1f4570e749f@{ shape: hex, label: "*Information Supply Chain Segment*
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**Deliver Treatment Assessment Report**"}
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7edca02c-e726-4570-815c-280bdf5498b9@{ shape: hex, label: "*Information Supply Chain Segment*
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**Data Lake to Sandbox**"}
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[Information Supply Chain Link]"|e4303326-e418-4f77-b8e7-fd5d34717594
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1c150d6e-30cf-481c-9afb-3b06c9c9e78f@{ shape: rect, label: "*Solution Component*
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[Solution Linking Wire]"|07705e15-efff-4f80-8992-f04ac85e0ef1
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**SolutionComponent:Populate Sandbox:V1.0**"}
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[Solution Linking Wire]"|26c07ca4-3b8e-484b-812b-36c1ace4b275
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**SolutionComponent:Treatment Efficacy Evidence:V1.0**"}
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**SolutionComponent:Analyse Patient Data:V1.0**"}
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**SolutionComponent:Treatment Validation Sandbox:V1.0**"}
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[Solution Linking Wire]"|72a86eec-9734-4bc0-babb-4fec0aa7c9ff
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[Solution Linking Wire]"|48bc201e-3d4e-4beb-bdb2-0fd9d134f6d5
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[Solution Linking Wire]"|b5c8da4c-f925-4cf1-8294-e43cd2c1a584
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**SolutionComponent:Treatment Assessment Report Validation and Delivery:V1.0**"}
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[Solution Linking Wire]"|0bf2547c-937c-41b6-814f-6284849271a1
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style 1c150d6e-30cf-481c-9afb-3b06c9c9e78f color:#FFFFFF, fill:#838cc7, stroke:#3079ab
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style 07705e15-efff-4f80-8992-f04ac85e0ef1 color:#FFFFFF, fill:#838cc7, stroke:#3079ab`;
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|
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const {svg} = await mermaid.render('mySvgId', graphDefinition);
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eventsHandler = {
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haltEventListeners: ['mousedown', 'mousemove', 'mouseup']
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, mouseMoveHandler: function (ev) {
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, init: function (options) {
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, destroy: function (options) {
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panZoom = svgPanZoom('#mySvgId', {
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, controlIconsEnabled: true
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, customEventsHandler: eventsHandler
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})
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};
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await drawDiagram();
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</script>
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</body>
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@@ -1,126 +0,0 @@
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<html>
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<head>
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<style type="text/css">
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#mySvgId {
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width: 100%;
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height: 100%;
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overflow: hidden;
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border: 1px solid #ccc;
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position: relative;
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margin-bottom: 10px;
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}
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svg {
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cursor: grab;
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}
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</style>
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</head>
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<body>
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<div id="graphDiv"></div>
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<script src="https://bumbu.me/svg-pan-zoom/dist/svg-pan-zoom.min.js"></script>
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<script type="module">
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import mermaid from 'https://cdn.jsdelivr.net/npm/mermaid@11/dist/mermaid.esm.min.mjs';
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mermaid.initialize({startOnLoad: false});
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await mermaid.run({
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querySelector: '.mermaid',
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postRenderCallback: (id) => {
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const container = document.getElementById("diagram-container");
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const svgElement = container.querySelector("svg");
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// Initialize Panzoom
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const panzoomInstance = Panzoom(svgElement, {
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maxScale: 5,
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minScale: 0.5,
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step: 0.1,
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});
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// Add mouse wheel zoom
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container.addEventListener("wheel", (event) => {
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panzoomInstance.zoomWithWheel(event);
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});
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}
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});
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const drawDiagram = async function () {
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const element = document.querySelector('#graphDiv');
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const graphDefinition = `
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flowchart TD
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%%{init: {"flowchart": {"htmlLabels": false}} }%%
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79d1d83f-6a37-4c32-bf3f-eb8b4358027c@{ shape: flip-tri, label: "*Information Supply Chain*
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**Employee Expense Payment**"}
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36905eb3-ebc3-4f78-92bd-81ab7f04b0c8@{ shape: text, label: "*Description*
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**Managing the collection of expense data, its approval and the subsequent payment authorization flows.**"}
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79d1d83f-6a37-4c32-bf3f-eb8b4358027c~~~36905eb3-ebc3-4f78-92bd-81ab7f04b0c8
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64023ff1-9b61-4655-aa0c-6310961f6d19@{ shape: text, label: "*Purpose*
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**Ensure employees are reimbursed for their expenses in a timely manner.**"}
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36905eb3-ebc3-4f78-92bd-81ab7f04b0c8~~~64023ff1-9b61-4655-aa0c-6310961f6d19
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88c42780-6fb1-49e2-a584-8af90cdc7728@{ shape: rounded, label: "*Software Server*
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**System:coco-hrim**"}
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ad8eab54-c2f7-494d-82d0-bf5985e5a58d@{ shape: rounded, label: "*Software Server*
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**System:coco-expenses**"}
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88c42780-6fb1-49e2-a584-8af90cdc7728-->|"payment authorization [Data Flow]"|ad8eab54-c2f7-494d-82d0-bf5985e5a58d
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style ad8eab54-c2f7-494d-82d0-bf5985e5a58d color:#000000, fill:#e0ab18, stroke:#004563
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style 79d1d83f-6a37-4c32-bf3f-eb8b4358027c color:#FFFFFF, fill:#004563, stroke:#b7c0c7
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style 64023ff1-9b61-4655-aa0c-6310961f6d19 color:#000000, fill:#F9F7ED, stroke:#b7c0c7
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style 88c42780-6fb1-49e2-a584-8af90cdc7728 color:#000000, fill:#e0ab18, stroke:#004563
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style 36905eb3-ebc3-4f78-92bd-81ab7f04b0c8 color:#000000, fill:#F9F7ED, stroke:#b7c0c7`;
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const {svg} = await mermaid.render('mySvgId', graphDefinition);
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element.innerHTML = svg.replace(/( )*max-width:( 0-9\.)*px;/i, '');
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var doPan = false;
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var eventsHandler;
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var panZoom;
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var mousepos;
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eventsHandler = {
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haltEventListeners: ['mousedown', 'mousemove', 'mouseup']
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, mouseDownHandler: function (ev) {
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if (event.target.className == "[object SVGAnimatedString]") {
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doPan = true;
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mousepos = {x: ev.clientX, y: ev.clientY}
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}
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;
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}
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, mouseMoveHandler: function (ev) {
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if (doPan) {
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panZoom.panBy({x: ev.clientX - mousepos.x, y: ev.clientY - mousepos.y});
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mousepos = {x: ev.clientX, y: ev.clientY};
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window.getSelection().removeAllRanges();
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}
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}
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, mouseUpHandler: function (ev) {
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doPan = false;
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}
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, init: function (options) {
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options.svgElement.addEventListener('mousedown', this.mouseDownHandler, false);
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options.svgElement.addEventListener('mousemove', this.mouseMoveHandler, false);
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options.svgElement.addEventListener('mouseup', this.mouseUpHandler, false);
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}
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, destroy: function (options) {
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options.svgElement.removeEventListener('mousedown', this.mouseDownHandler, false);
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options.svgElement.removeEventListener('mousemove', this.mouseMoveHandler, false);
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options.svgElement.removeEventListener('mouseup', this.mouseUpHandler, false);
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}
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}
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panZoom = svgPanZoom('#mySvgId', {
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zoomEnabled: true
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, controlIconsEnabled: true
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, fit: 1
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, center: 1
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, customEventsHandler: eventsHandler
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})
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};
|
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await drawDiagram();
|
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</script>
|
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125
|
-
</body>
|
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|