pyeasyphd 0.1.0__py3-none-any.whl → 0.1.2__py3-none-any.whl

pyeasyphd/.python-version

@@ -1 +1 @@
-3.8
+3.13

pyeasyphd/main/__init__.py

@@ -3,15 +3,11 @@
 __all__ = [
     "BasicInput",
     "PandocMdTo",
-    "PythonRunBib",
     "PythonRunMd",
     "PythonRunTex",
-    "PythonWriters",
 ]
 
 from .basic_input import BasicInput
 from .pandoc_md_to import PandocMdTo
-from .python_run_bib import PythonRunBib
 from .python_run_md import PythonRunMd
 from .python_run_tex import PythonRunTex
-from .python_writers import PythonWriters

pyeasyphd/main/basic_input.py

@@ -1,11 +1,11 @@
-import json
 import os
 from typing import Any, Dict
 
 from pyadvtools import read_list, standard_path
+from pybibtexer.main import BasicInput as BasicInputInPyBibtexer
 
 
-class BasicInput(object):
+class BasicInput(BasicInputInPyBibtexer):
     """Basic input.
 
     Args:
@@ -16,11 +16,6 @@ class BasicInput(object):
         path_figures (str): Path figures.
         path_templates (str): Path templates.
 
-        full_abbr_article_dict (Dict[str, str]): Full abbr article dict.
-        full_abbr_inproceedings_dict (Dict[str, str]): Full abbr inproceedings dict.
-        full_names_in_json (str): Full names in json.
-        abbr_names_in_json (str): Abbr names in json.
-
         full_csl_style_pandoc (str): Full path to csl style for pandoc.
         full_tex_article_template_pandoc (str): Full path to tex article template for pandoc.
         article_template_tex (List[str]): Article template for LaTex.
@@ -29,8 +24,8 @@ class BasicInput(object):
         article_template_tail_tex (List[str]): Article template tail for LaTex.
         beamer_template_header_tex (List[str]): Beamer template header for LaTex.
         beamer_template_tail_tex (List[str]): Beamer template tail for LaTex.
-        tex_math_commands_tex (List[str]): Tex math commands for LaTex.
-        tex_usepackages_tex (List[str]): Tex usepackages for LaTex.
+        math_commands_tex (List[str]): Tex math commands for LaTex.
+        usepackages_tex (List[str]): Tex usepackages for LaTex.
         handly_preamble (bool): Handly preamble.
 
         options (Dict[str, Any]): Options.
@@ -68,8 +63,9 @@ class BasicInput(object):
                     self.path_templates = p
                     break
 
-        # bib/core
-        self._initialize_middlewares(options)
+        full_json_c = os.path.join(self.path_templates, "AbbrFull", "conferences.json")
+        full_json_j = os.path.join(self.path_templates, "AbbrFull", "journals.json")
+        super().__init__(full_json_c, full_json_j, options)
 
         # main
         self._initialize_pandoc_md_to(options)
@@ -77,58 +73,6 @@ class BasicInput(object):
 
         self.options = options
 
-    # bib/core
-    def _initialize_middlewares(self, options: Dict[str, Any]) -> None:
-        full_json_c = os.path.join(self.path_templates, "AbbrFull", "conferences.json")
-        full_json_j = os.path.join(self.path_templates, "AbbrFull", "journals.json")
-        if os.path.isfile(full_json_c):
-            with open(full_json_c, "r") as f:
-                try:
-                    json_dict = json.loads(f.read())
-                except Exception as e:
-                    print(e)
-                    json_dict = {}
-                full_abbr_inproceedings_dict = {p: json_dict[p].get("conferences", {}) for p in json_dict}
-        else:
-            full_abbr_inproceedings_dict = {}
-
-        if os.path.isfile(full_json_j):
-            with open(full_json_j, "r") as f:
-                try:
-                    json_dict = json.loads(f.read())
-                except Exception as e:
-                    print(e)
-                    json_dict = {}
-                full_abbr_article_dict = {p: json_dict[p].get("journals", {}) for p in json_dict}
-        else:
-            full_abbr_article_dict = {}
-
-        inproceedings_dict = options.get("full_abbr_inproceedings_dict", {})
-        if len(inproceedings_dict) == 0:
-            inproceedings_dict = full_abbr_inproceedings_dict
-        self.full_abbr_inproceedings_dict = full_abbr_inproceedings_dict
-
-        article_dict = options.get("full_abbr_article_dict", {})
-        if len(article_dict) == 0:
-            article_dict = full_abbr_article_dict
-        self.full_abbr_article_dict = full_abbr_article_dict
-
-        full_names_in_json = options.get("full_names_in_json", "names_full")
-        if len(full_names_in_json) == 0:
-            full_names_in_json = "names_full"
-        self.full_names_in_json = full_names_in_json
-
-        abbr_names_in_json = options.get("abbr_names_in_json", "names_abbr")
-        if len(abbr_names_in_json) == 0:
-            abbr_names_in_json = "names_abbr"
-        self.abbr_names_in_json = abbr_names_in_json
-
-        options["full_abbr_article_dict"] = self.full_abbr_article_dict
-        options["full_abbr_inproceedings_dict"] = self.full_abbr_inproceedings_dict
-
-        options["full_names_in_json"] = self.full_names_in_json
-        options["abbr_names_in_json"] = self.abbr_names_in_json
-
     # main
     def _initialize_pandoc_md_to(self, options: Dict[str, Any]) -> None:
         csl_name = options.get("csl_name", "apa-no-ampersand")

pyeasyphd/main/python_run_md.py

@@ -11,11 +11,11 @@ from pyadvtools import (
     read_list,
     write_list,
 )
+from pybibtexer.bib.core import ConvertStrToLibrary
+from pybibtexer.main.python_writers import PythonWriters
 
-from ..bib.core import ConvertStrToLibrary
 from .basic_input import BasicInput
 from .pandoc_md_to import PandocMdTo
-from .python_writers import PythonWriters
 
 
 class PythonRunMd(BasicInput):
@@ -135,7 +135,7 @@ class PythonRunMd(BasicInput):
         _options = {}
         _options.update(self.options)
         _options["add_index_to_enties"] = False
-        _python_writers = PythonWriters(_options)
+        _python_writers = PythonWriters(self.full_json_c, self.full_json_j, _options)
         key_url_http_bib_dict = _python_writers.output_key_url_http_bib_dict(library)
 
         content_md = []

pyeasyphd/main/python_run_tex.py

@@ -31,7 +31,7 @@ class PythonRunTex(BasicInput):
         # for tex
         self.final_output_main_tex_name: str = options.get("final_output_main_tex_name", "")
         self.run_latex: bool = options.get("run_latex", False)
-        self.pdflatex_xelatex: str = options.get("pdflatex_xelatex", "pdflatex")  # pdflatex, xelatex
+        self.pdflatex_xelatex: str = options.get("pdflatex_xelatex", "xelatex")  # pdflatex, xelatex
         self.delete_run_latex_cache: bool = options.get("delete_run_latex_cache", True)
         self.latex_clean_file_types: Optional[List[str]] = options.get("latex_clean_file_types", None)
 

pyeasyphd/pyeasyphd.sublime-settings

@@ -9,146 +9,6 @@
     "path_figures": "",
     "path_templates": "",
 
-    // pyeasyphd/bib/core/convert_str_to_str.py
-    "default_additional_field_list": [],
-
-    // pyeasyphd/bib/bibtexparser/middlewares_str_to_str.py
-    "substitute_in_bib": true,
-    "substitute_old_list": [],
-    "substitute_new_list": [],
-
-
-    // pyeasyphd/bib/core/convert_str_to_library.py
-    "is_standardize_bib": true,
-
-    // pyeasyphd/bib/bibtexparser/middlewares_str_to_library.py
-    "is_display_implicit_comments": true,
-
-
-    // pyeasyphd/bib/core/convert_library_to_library.py
-    // "abbr", "zotero", or "save"
-    "choose_abbr_zotero_save": "save",
-
-    // pyeasyphd/bib/bibtexparser/middlewares_library_to_library.py
-    "function_common_again": true,
-    "function_common_again_abbr": true,
-    "function_common_again_zotero": true,
-    "function_common_again_save": true,
-    // "is_sort_entry_fields": false,
-    // "is_sort_blocks": false,
-    // "sort_entries_by_cite_keys": [],
-    // "sort_entries_by_field_keys": ["year", "volume", "number", "month", "pages"],
-    // "sort_entries_by_field_keys_reverse": false,
-
-    // for common
-    "lower_entry_type": true,
-    "lower_entry_field_key": true,
-    "keep_entries_by_cite_keys": [],
-    "update_month_year": true,
-    "update_number_volume": true,
-    "update_pages": true,
-    "update_title": true,
-    "sentence_title_case": true,
-    "generate_entry_cite_keys": false,
-    "full_abbr_article_dict": {},
-    "full_abbr_inproceedings_dict": {},
-    "full_names_in_json": "names_full",
-    "abbr_names_in_json": "names_abbr",
-
-    // special for abbr
-    // abbreviate
-    "full_to_abbr_for_abbr": true,
-    // 0, 1, 2
-    "abbr_index_article_for_abbr": 1,
-    "abbr_index_inproceedings_for_abbr": 2,
-
-    // format doi and url
-    // keep only doi or url
-    "doi_or_url_for_abbr": true,
-    // change doi to url format (https://doi.org/xxx)
-    "doi_to_url_for_abbr": true,
-    // add link to fields
-    "add_link_to_fields_for_abbr": null,
-
-    // keep some fields for abbr
-    // true, false
-    "keep_fields_for_abbr": true,
-    "keep_entry_list_for_abbr": ["article", "inproceedings", "incollection", "misc", "book", "phdthesis", "mastersthesis", "techreport"],
-    "keep_field_list_list_for_abbr": [
-        ["author", "title", "year", "month", "journal", "pages", "volume", "number", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "booktitle", "pages", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "booktitle", "pages", "publisher", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "publisher", "howpublished", "pages", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "publisher", "edition", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "type", "school", "address", "pages", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "type", "school", "address", "pages", "doi", "url", "annotation"],
-        ["author", "title", "year", "month", "type", "institution", "address", "pages", "doi", "url", "annotation"],
-    ],
-
-    // delete fields list for abbr
-    "delete_fields_list_for_abbr": [],
-
-    // replace some fields for abbr
-    "replace_fields_for_abbr": true,
-    "replace_old_field_list_for_abbr": [["publisher"]],
-    "replace_new_field_list_for_abbr": [["howpublished"]],
-    "replace_entry_list_for_abbr": ["misc"],
-    // constrain the number of authors for abbr
-    "maximum_authors_for_abbr": 0,
-
-    // special for zotero
-    // format doi and url
-    "doi_or_url_for_zotero": true,
-
-    // keep some fields for zotero
-    // true, false
-    "keep_fields_for_zotero": true,
-    "keep_entry_list_for_zotero": ["article", "inproceedings", "incollection", "misc", "book", "phdthesis", "mastersthesis", "techreport"],
-    "keep_field_list_list_for_zotero": [
-        ["abstract", "author", "title", "year", "month", "journal", "pages", "volume", "number", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "booktitle", "pages", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "booktitle", "pages", "publisher", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "publisher", "pages", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "publisher", "edition", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "type", "school", "address", "pages", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "type", "school", "address", "pages", "doi", "url", "annotation"],
-        ["abstract", "author", "title", "year", "month", "type", "institution", "address", "pages", "doi", "url", "annotation"],
-    ],
-
-    // delete fields list for zotero
-    "delete_fields_list_for_zotero": [],
-
-    // delete redundant in `journal` or `booktitle`
-    "delete_redundant_in_journal_booktitle": true,
-
-    // title (lower, upper) journal and booktitle
-    "title_journal_booktitle_for_zotero": true,
-
-    // add field 'archive'.
-    "add_archive_for_zotero": true,
-
-    // add field 'journal abbreviation'.
-    "add_journal_abbr_for_zotero": true,
-
-    // special for save
-    // delete fields list for save
-    "delete_fields_list_for_save": [],
-
-
-    // pyeasyphd/bib/core/convert_library_to_str.py
-    "is_standardize_library": false,
-    "empty_entry_cite_keys": false,
-    "add_index_to_entries": false,
-    "entries_necessary": true,
-
-    // pyeasyphd/bib/bibtexparser/middlewares_library_to_str.py
-    "is_sort_entry_fields": true,
-    "is_sort_blocks": true,
-    "sort_entries_by_cite_keys": [],
-    "sort_entries_by_field_keys": ["year", "volume", "number", "month", "pages"],
-    "sort_entries_by_field_keys_reverse": true,
-
-
     // pyeasyphd/main/pandoc_md_to.py
     // for pandoc
     "csl_name": "apa-no-ampersand",
@@ -160,20 +20,6 @@
     // "fullcite", "cite"
     "cite_flag_in_tex": "cite",
 
-    // for bib file
-    // pyeasyphd/main/python_writers.py
-    // "abbr.bib", "zotero.bib", "save.bib"
-    "bib_for_abbr_name": "abbr.bib",
-    "bib_for_zotero_name": "zotero.bib",
-    "bib_for_save_name": "save.bib",
-    // "choose_abbr_zotero_save": "save",
-    // choose multiple items ["google", "connected", "scite"]
-    "display_google_connected_scite": ["google", "connected", "scite"],
-    // bib format
-    "bibtex_format_indent": "  ",
-    "bibtex_format_trailing_comma": true,
-    "bibtex_format_block_separator": "",
-
     // for md file
     // pyeasyphd/main/python_run_md.py
     // default is ""
@@ -201,7 +47,7 @@
     // true, false
     "run_latex": false,
     // "pdflatex", "xelatex"
-    "pdflatex_xelatex": "pdflatex",
+    "pdflatex_xelatex": "xelatex",
     // true, false
     "delete_run_latex_cache": true,
     "latex_clean_file_types": [
@@ -223,14 +69,10 @@
     "figure_folder_name": "fig", // "" or "figs" or "main"
     "bib_folder_name": "bib", // "" or "bibs" or "main"
     "md_folder_name": "md", // "" or "mds" or "main"
-    "tex_folder_name": "tex", // "" or "texes" or "main"
+    "tex_folder_name": "tex", // "" or "texs" or "main"
 
     // for delete original md, tex, and bib files in output folder
     "delete_original_md_in_output_folder": false,
     "delete_original_tex_in_output_folder": false,
     "delete_original_bib_in_output_folder": false,
-
-    // pyeasyphd/pyeasyphd.py
-    // default is the same with the active file
-    "path_output": "",
 }

pyeasyphd/tools/__init__.py

@@ -2,29 +2,14 @@
 
 __all__ = [
     "PyRunBibMdTex",
-    "format_entries_for_abbr_zotero_save",
-    "generate_statistic_information",
-
-    "generate_standard_publisher_abbr_options_dict",
 
     "Searchkeywords",
-    "generate_from_bibs_and_write",
 
+    "generate_from_bibs_and_write",
     "PaperLinksGenerator",
-
-    "compare_bibs_with_local",
-    "compare_bibs_with_zotero",
-    "replace_to_standard_cite_keys",
-
-    "CheckDeleteFormatMoveSpideredBibs",
 ]
 
-from .compare.compare_bibs import compare_bibs_with_local, compare_bibs_with_zotero
-from .experiments_base import generate_standard_publisher_abbr_options_dict
-from .format_save_bibs import format_entries_for_abbr_zotero_save, generate_statistic_information
 from .generate.generate_from_bibs import generate_from_bibs_and_write
 from .generate.generate_links import PaperLinksGenerator
 from .py_run_bib_md_tex import PyRunBibMdTex
-from .replace.replace import replace_to_standard_cite_keys
 from .search.search_keywords import Searchkeywords
-from .spider.process_spider_url_bib import CheckDeleteFormatMoveSpideredBibs