pydna 5.5.0__py3-none-any.whl → 5.5.1__py3-none-any.whl

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Files changed (5) hide show
  1. pydna/__init__.py +1 -1
  2. {pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/METADATA +6 -5
  3. {pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/RECORD +5 -5
  4. {pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/WHEEL +1 -1
  5. {pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/LICENSE.txt +0 -0
pydna/__init__.py CHANGED
@@ -150,7 +150,7 @@ __license__ = "BSD"
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  __maintainer__ = "Björn Johansson"
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  __email__ = "bjorn_johansson@bio.uminho.pt"
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  __status__ = "Development" # "Production" #"Prototype"
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- __version__ = "5.5.0"
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+ __version__ = "5.5.1"
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  # create config directory
{pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.3
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  Name: pydna
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- Version: 5.5.0
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+ Version: 5.5.1
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  Summary: Representing double stranded DNA and functions for simulating cloning and homologous recombination between DNA molecules.
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  License: BSD
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  Author: Björn F. Johansson
@@ -24,11 +24,12 @@ Provides-Extra: download
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  Provides-Extra: express
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  Provides-Extra: gel
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  Requires-Dist: appdirs (>=1.4.4)
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- Requires-Dist: biopython (>=1.80)
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+ Requires-Dist: biopython (>=1.85)
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  Requires-Dist: cai2 (>=1.0.5) ; extra == "express"
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  Requires-Dist: matplotlib (>=3.4.3) ; extra == "gel"
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  Requires-Dist: networkx (>=2.8.8)
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- Requires-Dist: numpy (>1.26)
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+ Requires-Dist: numpy (>1.26) ; python_version < "3.12"
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+ Requires-Dist: numpy (>=2.3.0) ; python_version >= "3.12"
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  Requires-Dist: pillow (>=8.4.0) ; extra == "gel"
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  Requires-Dist: prettytable (>=3.5.0)
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  Requires-Dist: pydivsufsort (>=0.0.14)
@@ -45,7 +46,7 @@ Project-URL: Homepage, https://github.com/pydna-group/pydna#-pydna
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  Project-URL: Repository, https://github.com/pydna-group/pydna/tree/master
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  Description-Content-Type: text/markdown
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- # ![icon](docs/_static/pydna.resized.png) pydna
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+ # ![icon](https://github.com/pydna-group/pydna/blob/master/docs/_static/pydna.resized.png?raw=true) pydna
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  | [![Tests & Coverage](https://github.com/pydna-group/pydna/actions/workflows/pydna_test_and_coverage_workflow.yml/badge.svg?branch=dev_bjorn)](https://github.com/pydna-group/pydna/actions/workflows/pydna_test_and_coverage_workflow.yml) | [![codecov](https://codecov.io/gh/BjornFJohansson/pydna/branch/master/graph/badge.svg)](https://codecov.io/gh/BjornFJohansson/pydna/branch/master) | [![PyPI version](https://badge.fury.io/py/pydna.svg)](https://badge.fury.io/py/pydna) | [![Google group : pydna](https://img.shields.io/badge/Google%20Group-pydna-blue.svg)](https://groups.google.com/g/pydna) |
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  | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | -------------------------------------------------------------------------------------------------------------------------------------------------- | -------------------------------------------------------------------------------------------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------- |
@@ -442,7 +443,7 @@ Below are the instructions for developers who want to contribute to pydna. Pleas
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  Fork the entire repository (not just the `master` branch by unticking the "Copy the `master` branch only" box)
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- <img src="docs/_static/create-fork.png" alt="Fork repository" width="400">
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+ ![Fork](https://github.com/pydna-group/pydna/blob/master/docs/_static/create-fork.png?raw=true)
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  Create your branch starting from `dev_bjorn`, and if your changes are related to an issue, call the branch `issue_<number>`.
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{pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/RECORD RENAMED
@@ -1,4 +1,4 @@
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- pydna/__init__.py,sha256=QmteIqgNg8sAeRrXfFOOewLYxuQy21oceQ2DeAggPig,13391
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+ pydna/__init__.py,sha256=_BLqB7eQOWvmMql1-tqh-BSkXMYerYFDdAYpwAAxWEw,13391
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  pydna/_pretty.py,sha256=eMjYTy19AUTA-nntiYEql3FPVe4WzTLSZ4f0Jd6SLfo,1172
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  pydna/_thermodynamic_data.py,sha256=9_w-97DpkbsWbJGHVijscMvUS_SFt7GxzrxspMRPZSg,10903
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  pydna/all.py,sha256=i2dR9cAccr3AdtAMMeH4jazpVjxWjfvu8LB3LD9hwgY,2099
@@ -38,7 +38,7 @@ pydna/threading_timer_decorator_exit.py,sha256=D91kqjKSavWDnXyc1Fo-CwPYtbmR2DjTX
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  pydna/tm.py,sha256=YVXgDMB_AxNyzPR9fYT1YWlfy80paKTl2r0bkLFNxU8,11330
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  pydna/user_cloning.py,sha256=VSpYX1tdbcD_PzEt69Jz6Lud-yAkYMVXnzVd4v2usnE,692
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  pydna/utils.py,sha256=7CQ8tkVcTcNY_k1eBbP242ax3X2MMZGZ1cPhHcDY8y4,22084
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- pydna-5.5.0.dist-info/LICENSE.txt,sha256=u8QfcsnNXZM0UCexerK_MvyA2lPWgeGyUtSYXvLG6Oc,6119
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- pydna-5.5.0.dist-info/METADATA,sha256=c-uZramQdFTL6ceghaoWSt7aZNuJFoD8FeUhgAxmy9Y,24322
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- pydna-5.5.0.dist-info/WHEEL,sha256=XbeZDeTWKc1w7CSIyre5aMDU_-PohRwTQceYnisIYYY,88
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- pydna-5.5.0.dist-info/RECORD,,
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+ pydna-5.5.1.dist-info/LICENSE.txt,sha256=u8QfcsnNXZM0UCexerK_MvyA2lPWgeGyUtSYXvLG6Oc,6119
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+ pydna-5.5.1.dist-info/METADATA,sha256=mJGG_H_ccfb97ELbilQYUxFvjIVBNYt7X2Tdwe2Pp0Y,24485
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+ pydna-5.5.1.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
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+ pydna-5.5.1.dist-info/RECORD,,
{pydna-5.5.0.dist-info → pydna-5.5.1.dist-info}/WHEEL RENAMED
@@ -1,4 +1,4 @@
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  Wheel-Version: 1.0
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- Generator: poetry-core 2.1.1
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+ Generator: poetry-core 2.1.3
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  Root-Is-Purelib: true
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  Tag: py3-none-any