pydefx 9.14.0__py3-none-any.whl

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Files changed (45) hide show
  1. mpmcn.py +154 -0
  2. pydefx/__init__.py +32 -0
  3. pydefx/allpurposebuilder.py +56 -0
  4. pydefx/configuration.py +120 -0
  5. pydefx/defaultschemabuilder.py +55 -0
  6. pydefx/localbuilder.py +37 -0
  7. pydefx/localstudy.py +78 -0
  8. pydefx/multijobbuilder.py +33 -0
  9. pydefx/multijobstudy.py +84 -0
  10. pydefx/parameters.py +169 -0
  11. pydefx/plugins/jobexecutor.py +130 -0
  12. pydefx/plugins/lightexecutor.py +40 -0
  13. pydefx/plugins/localexecutor.py +81 -0
  14. pydefx/plugins/mainjob.py +56 -0
  15. pydefx/plugins/pointeval.py +39 -0
  16. pydefx/plugins/srunexecutor.py +87 -0
  17. pydefx/pyscript.py +110 -0
  18. pydefx/pystudy.py +327 -0
  19. pydefx/salome_proxy.py +88 -0
  20. pydefx/sample.py +263 -0
  21. pydefx/samplecsviterator.py +191 -0
  22. pydefx/samplecsvmanager.py +136 -0
  23. pydefx/schemas/idefix_pyschema.xml +106 -0
  24. pydefx/schemas/plugin.py +81 -0
  25. pydefx/slurmbuilder.py +33 -0
  26. pydefx/slurmstudy.py +77 -0
  27. pydefx/studyexception.py +41 -0
  28. pydefx/studyresult.py +54 -0
  29. pydefx-9.14.0.dist-info/METADATA +22 -0
  30. pydefx-9.14.0.dist-info/RECORD +45 -0
  31. pydefx-9.14.0.dist-info/WHEEL +4 -0
  32. salome/bin/salome/test/CTestTestfile.cmake +28 -0
  33. salome/bin/salome/test/cpp/CTestTestfile.cmake +36 -0
  34. salome/bin/salome/test/cpp/SampleTest +0 -0
  35. salome/bin/salome/test/cpp/StudyGeneralTest +0 -0
  36. salome/bin/salome/test/cpp/StudyRestartTest +0 -0
  37. salome/bin/salome/test/pyexample/CTestTestfile.cmake +25 -0
  38. salome/bin/salome/test/pyexample/insitu/insituiterator.py +48 -0
  39. salome/bin/salome/test/pyexample/insitu/insitumanager.py +46 -0
  40. salome/bin/salome/test/pyexample/runUnitTest.sh +26 -0
  41. salome/bin/salome/test/pyexample/test_default.py +79 -0
  42. salome/bin/salome/test/pyexample/test_insitu.py +60 -0
  43. salome/bin/salome/test/pyexample/test_mpmcn.py +40 -0
  44. salome/bin/salome/test/pyexample/test_prescript.py +52 -0
  45. salome/bin/salome/test/pyexample/test_ydefx_base.py +79 -0
@@ -0,0 +1,60 @@
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+ import unittest
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+ import insitu.insitumanager
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+ import os
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+ import time
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+
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+
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+ class TestYdefx(unittest.TestCase):
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+ def test_insitu(self):
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+ """
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+ This test shows how to use insitu processing.
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+ """
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+ import pydefx
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+
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+ myParams = pydefx.Parameters()
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+ myParams.configureResource("localhost")
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+ mywd = os.path.join(myParams.salome_parameters.work_directory,
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+ "insitu_test" +
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+ time.strftime("%Y-%m-%d-%H-%M-%S", time.localtime()))
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+ myParams.salome_parameters.work_directory = mywd
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+ myParams.createResultDirectory("/tmp")
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+
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+ pyScript = """
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+ def _exec(x):
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+ with open("mydata.txt") as f:
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+ mydata = f.read()
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+ intdata = int(mydata)
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+ y = x + intdata
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+ return y"""
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+
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+ myScript = pydefx.PyScript()
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+ myScript.loadString(pyScript)
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+
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+ mySample = myScript.CreateEmptySample()
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+ mydata = {"x":list(range(10))}
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+ mySample.setInputValues(mydata)
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+
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+ # pre-processing script called before the first evaluation
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+ myPrescript = """
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+ with open("mydata.txt", "w") as f:
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+ f.write("1")
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+ """
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+ mySchemaBuilder = pydefx.DefaultSchemaBuilder(myPrescript)
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+
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+ mySampleManager = insitu.insitumanager.InsituManager()
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+
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+ myStudy = pydefx.PyStudy(sampleManager=mySampleManager,
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+ schemaBuilder=mySchemaBuilder)
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+ myStudy.createNewJob(myScript, mySample, myParams)
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+
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+ myStudy.launch()
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+ myStudy.wait()
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+ myStudy.getResult()
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+ expected = """Exit code : 0
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+ Error message : None
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+ Result:
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+ 55.0"""
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+ self.assertEqual(str(myStudy.global_result),expected)
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+
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+ if __name__ == '__main__':
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+ unittest.main()
@@ -0,0 +1,40 @@
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+
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+ #!/usr/bin/env python3
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+ # -*- coding: utf-8 -*-
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+ #
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+
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+ # multiple processes on multiple compute nodes
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+
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+ def f(x):
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+ return x*x*x
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+
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+ def f2(x):
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+ if x==3:
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+ raise RuntimeError("lllll")
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+ return x*x*x
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+
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+ import mpmcn
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+
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+ def gg():
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+ # case 0 : normal behavior with no raise
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+ params = mpmcn.init("localhost")
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+ with mpmcn.Pool(params) as p:
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+ res = p.map(f,list(range(10)))
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+ # getResultDirectory : for advanced users
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+ p.getResultDirectory()
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+ if res != [0.0, 1.0, 8.0, 27.0, 64.0, 125.0, 216.0, 343.0, 512.0, 729.0]:
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+ raise RuntimeError("Test Failed !")
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+ # case 1 : behavior with raise
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+ params = mpmcn.init("localhost")
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+ with mpmcn.Pool(params) as p2:
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+ try:
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+ res = p2.map(f2,list(range(10)))
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+ raise RuntimeError("Exception not thrown -> Error !")
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+ except RuntimeError as e:
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+ strExpected = "Error for sample # 3 : \'lllll\'"
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+ # tmp_dir attr of e returns the ResultDirectory to dive into
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+ if str(e)[:len(strExpected)] != strExpected or not hasattr(e,"tmp_dir"):
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+ raise RuntimeError("Test Failed 2 !")
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+
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+ if __name__ == "__main__":
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+ gg()
@@ -0,0 +1,52 @@
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+ import unittest
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+ import os
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+ import time
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+
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+ class TestYdefx(unittest.TestCase):
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+ def test_prescript(self):
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+ """
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+ This test shows how to use an initialization script which is called one time
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+ before any evaluation of the study function.
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+ """
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+ import pydefx
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+
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+ myParams = pydefx.Parameters()
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+ myParams.configureResource("localhost")
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+ mywd = os.path.join(myParams.salome_parameters.work_directory,
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+ "prescript_test" +
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+ time.strftime("%Y-%m-%d-%H-%M-%S", time.localtime()))
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+ myParams.salome_parameters.work_directory = mywd
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+ myParams.createResultDirectory("/tmp")
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+
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+ pyScript = """
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+ def _exec(name):
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+ with open("mydata.txt") as f:
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+ mydata = f.read()
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+ message = mydata + name
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+ return message"""
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+
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+ myScript = pydefx.PyScript()
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+ myScript.loadString(pyScript)
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+
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+ mySample = myScript.CreateEmptySample()
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+ mydata = {"name":["Jean", "Toto", "Titi", "Zizi"]}
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+ mySample.setInputValues(mydata)
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+
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+ myPrescript = """
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+ with open("mydata.txt", "w") as f:
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+ f.write("Hello ")
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+ """
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+
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+ mySchemaBuilder = pydefx.DefaultSchemaBuilder(myPrescript)
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+
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+ myStudy = pydefx.PyStudy(schemaBuilder=mySchemaBuilder)
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+ myStudy.createNewJob(myScript, mySample, myParams)
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+
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+ myStudy.launch()
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+ myStudy.wait()
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+ myStudy.getResult()
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+ expected = "name,message,messages\n'Jean','Hello Jean',\n'Toto','Hello Toto',\n'Titi','Hello Titi',\n'Zizi','Hello Zizi',\n"
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+ self.assertEqual(str(myStudy.sample),expected)
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+
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+ if __name__ == '__main__':
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+ unittest.main()
@@ -0,0 +1,79 @@
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+ # -*- coding: utf-8 -*-
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+ # Copyright (C) 2024 CEA, EDF
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+ #
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+ # This library is free software; you can redistribute it and/or
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+ # modify it under the terms of the GNU Lesser General Public
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+ # License as published by the Free Software Foundation; either
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+ # version 2.1 of the License, or (at your option) any later version.
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+ #
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+ # This library is distributed in the hope that it will be useful,
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+ # but WITHOUT ANY WARRANTY; without even the implied warranty of
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+ # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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+ # Lesser General Public License for more details.
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+ #
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+ # You should have received a copy of the GNU Lesser General Public
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+ # License along with this library; if not, write to the Free Software
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+ # Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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+ #
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+ # See http://www.salome-platform.org/ or email : webmaster.salome@opencascade.com
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+ #
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+
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+ from salome.kernel import salome_utils
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+ import unittest
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+ import os
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+ from pathlib import Path
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+ import pydefx
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+
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+ class TestYdefxBase(unittest.TestCase):
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+ def test0(self):
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+ """
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+ See EDF31521
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+ """
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+ myParams = pydefx.Parameters("localhost", 4)
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+ myParams.salome_parameters.work_directory = "{}".format(Path( myParams.salome_parameters.work_directory ) / "my_base_case" )
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+ myParams.salome_parameters.verbose_py_log_level = "ERROR" # ERROR - WARNING - INFO - DEBUG
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+ myParams.createResultDirectory("/tmp")
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+ myParams.salome_parameters.in_files = []
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+ salome_utils.logger.info( f"ressource de calcul: {myParams.salome_parameters.resource_required.name}")
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+ salome_utils.logger.info( f"nombre d'évaluations parallèles: {myParams.nb_branches}")
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+ salome_utils.logger.info( f"nombre de coeurs demandés: {myParams.salome_parameters.resource_required.nb_proc}" )
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+ salome_utils.logger.info( f"nombre de noeuds demandés: {myParams.salome_parameters.resource_required.nb_node}" )
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+ salome_utils.logger.info( f"répertoire de travail: {myParams.salome_parameters.work_directory}" )
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+ salome_utils.logger.info( f"répertoire local de gestion: {myParams.salome_parameters.result_directory}" )
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+ myScript = pydefx.PyScript()
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+ myScript.loadString("""from salome.kernel import salome_utils
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+ def _exec(x, y):
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+ from salome.kernel import KernelBasis
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+ cst = 1.28
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+ salome_utils.logger.info("Je suis une info")
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+ KernelBasis.HeatMarcel(cst*1.0,1)
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+ d = y / x
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+ t = "{} / {} = {}".format(x, y, d)
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+ print(f"****** {x}")
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+ return d, t
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+ """)
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+ salome_utils.logger.info( f"Inputs : {myScript.getInputNames()}")
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+ salome_utils.logger.info( f"Outputs : {myScript.getOutputNames()}")
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+ mySample = myScript.CreateEmptySample()
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+ mySample.setInputValues({ "x":[ 10, 20, 30, 40],
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+ "y":[ 20, 60, 120, 200]})
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+ myStudy = pydefx.PyStudy()
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+ myStudy.createNewJob(myScript, mySample, myParams)
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+ myStudy.launch()
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+ salome_utils.logger.info( f"Avancement: {myStudy.getProgress()}")
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+ salome_utils.logger.info( f"Etat: {myStudy.getJobState()}" )
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+
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+ # Attendre la fin des calculs
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+ myStudy.wait()
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+
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+ salome_utils.logger.info( f"Etat: {myStudy.getJobState()}" )
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+ salome_utils.logger.info( f"Etat: {myStudy.getJobState()}" )
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+ res = myStudy.getResult()
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+ self.assertEqual(res.result.getOutput("d"), [ 2.0, 3.0, 4.0, 5.0 ] )
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+ self.assertEqual( res.result.getOutput("t"), [ '10.0 / 20.0 = 2.0', '20.0 / 60.0 = 3.0', '30.0 / 120.0 = 4.0', '40.0 / 200.0 = 5.0' ] )
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+
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+ if __name__ == '__main__':
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+ import KernelBasis
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+ KernelBasis.SetVerbosityLevel("WARNING")
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+ salome_utils.positionVerbosityOfLoggerRegardingState()
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+ unittest.main()