pycorpdiff 0.1.0a0__py3-none-any.whl

pycorpdiff/viz/trajectory.py

@@ -0,0 +1,48 @@
+"""Temporal trajectory plot — line + Wilson CI band."""
+
+from __future__ import annotations
+
+from typing import TYPE_CHECKING
+
+import pandas as pd
+
+if TYPE_CHECKING:
+    import altair as alt
+
+
+def trajectory_with_ci(
+    df: pd.DataFrame,
+    width: int = 600,
+    height: int = 300,
+) -> alt.Chart:
+    """Time series of relative frequencies with a Wilson CI band.
+
+    Expects the columns produced by :meth:`Tracker.over_time`:
+    ``period``, ``term``, ``relfreq``, ``ci_lower``, ``ci_upper``.
+    Multiple terms are layered with the standard altair colour scheme.
+
+    The ``period`` column may contain :class:`pandas.Period` values —
+    converted to timestamps internally so altair gets a temporal axis.
+    """
+    import altair as alt
+
+    plot_df = df.copy()
+    if isinstance(plot_df["period"].iloc[0], pd.Period):
+        plot_df["period"] = plot_df["period"].apply(lambda p: p.to_timestamp())
+
+    base = alt.Chart(plot_df).encode(
+        x=alt.X("period:T", title=None),
+        color=alt.Color("term:N", title=None),
+    )
+    band = base.mark_area(opacity=0.2).encode(
+        y=alt.Y("ci_lower:Q", title="Relative frequency"),
+        y2="ci_upper:Q",
+    )
+    line = base.mark_line(strokeWidth=2).encode(
+        y="relfreq:Q",
+        tooltip=["period", "term", "count", "total", "relfreq", "ci_lower", "ci_upper"],
+    )
+    points = base.mark_point(filled=True, size=50).encode(
+        y="relfreq:Q",
+    )
+    return (band + line + points).properties(width=width, height=height)  # type: ignore[no-any-return]

pycorpdiff-0.1.0a0.dist-info/METADATA

@@ -0,0 +1,230 @@
+Metadata-Version: 2.4
+Name: pycorpdiff
+Version: 0.1.0a0
+Summary: Comparative corpus analysis for Python: keyness, collocations, semantic shift, temporal trajectories with changepoints + causal inference.
+Project-URL: Homepage, https://github.com/jturner-uofl/pycorpdiff
+Project-URL: Documentation, https://github.com/jturner-uofl/pycorpdiff
+Project-URL: Repository, https://github.com/jturner-uofl/pycorpdiff
+Project-URL: Issues, https://github.com/jturner-uofl/pycorpdiff/issues
+Author-email: Jason Turner <jason.s.turner@gmail.com>
+License: MIT License
+        
+        Copyright (c) 2026 Jason Turner
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy
+        of this software and associated documentation files (the "Software"), to deal
+        in the Software without restriction, including without limitation the rights
+        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+        copies of the Software, and to permit persons to whom the Software is
+        furnished to do so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in all
+        copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+        SOFTWARE.
+License-File: LICENSE
+Keywords: collocation,comparative corpus analysis,computational social science,corpus linguistics,diachronic nlp,digital humanities,discourse analysis,keyness,semantic change,temporal text analysis
+Classifier: Development Status :: 2 - Pre-Alpha
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3 :: Only
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Topic :: Scientific/Engineering :: Information Analysis
+Classifier: Topic :: Text Processing :: Linguistic
+Requires-Python: >=3.11
+Requires-Dist: numpy>=1.24
+Requires-Dist: pandas<3,>=2.0
+Requires-Dist: pyarrow>=14
+Requires-Dist: scipy>=1.11
+Provides-Extra: all
+Requires-Dist: altair>=5; extra == 'all'
+Requires-Dist: datasets>=2.14; extra == 'all'
+Requires-Dist: duckdb>=0.10; extra == 'all'
+Requires-Dist: matplotlib>=3.8; extra == 'all'
+Requires-Dist: networkx>=3.1; extra == 'all'
+Requires-Dist: polars>=1.0; extra == 'all'
+Requires-Dist: pyarrow>=15; extra == 'all'
+Requires-Dist: pysofra>=0.1.0a2; extra == 'all'
+Requires-Dist: ruptures>=1.1; extra == 'all'
+Requires-Dist: scikit-learn>=1.3; extra == 'all'
+Requires-Dist: sentence-transformers>=2.2; extra == 'all'
+Requires-Dist: spacy>=3.7; extra == 'all'
+Requires-Dist: statsmodels>=0.14; extra == 'all'
+Requires-Dist: vl-convert-python>=1.5; extra == 'all'
+Provides-Extra: dev
+Requires-Dist: hypothesis>=6.100; extra == 'dev'
+Requires-Dist: mypy>=1.8; extra == 'dev'
+Requires-Dist: pandas-stubs>=2.2; extra == 'dev'
+Requires-Dist: pre-commit>=3.6; extra == 'dev'
+Requires-Dist: pytest-cov>=4.1; extra == 'dev'
+Requires-Dist: pytest>=8; extra == 'dev'
+Requires-Dist: ruff>=0.4; extra == 'dev'
+Provides-Extra: duckdb
+Requires-Dist: duckdb>=0.10; extra == 'duckdb'
+Provides-Extra: huggingface
+Requires-Dist: datasets>=2.14; extra == 'huggingface'
+Provides-Extra: nlp
+Requires-Dist: spacy>=3.7; extra == 'nlp'
+Provides-Extra: notebooks
+Requires-Dist: jupyter>=1.0; extra == 'notebooks'
+Requires-Dist: pysofra>=0.1.0a2; extra == 'notebooks'
+Requires-Dist: vl-convert-python>=1.5; extra == 'notebooks'
+Provides-Extra: polars
+Requires-Dist: polars>=1.0; extra == 'polars'
+Requires-Dist: pyarrow>=15; extra == 'polars'
+Provides-Extra: semantic
+Requires-Dist: scikit-learn>=1.3; extra == 'semantic'
+Requires-Dist: sentence-transformers>=2.2; extra == 'semantic'
+Provides-Extra: temporal
+Requires-Dist: ruptures>=1.1; extra == 'temporal'
+Requires-Dist: statsmodels>=0.14; extra == 'temporal'
+Provides-Extra: viz
+Requires-Dist: altair>=5; extra == 'viz'
+Requires-Dist: matplotlib>=3.8; extra == 'viz'
+Requires-Dist: networkx>=3.1; extra == 'viz'
+Description-Content-Type: text/markdown
+
+# pycorpdiff
+
+<!--
+TODO post-publish (Phase 5 — once GitHub repo public + PyPI published + Zenodo DOI minted):
+
+[![PyPI](https://img.shields.io/pypi/v/pycorpdiff.svg)](https://pypi.org/project/pycorpdiff/)
+[![Python versions](https://img.shields.io/pypi/pyversions/pycorpdiff.svg)](https://pypi.org/project/pycorpdiff/)
+[![CI](https://github.com/jturner-uofl/pycorpdiff/actions/workflows/ci.yml/badge.svg)](https://github.com/jturner-uofl/pycorpdiff/actions/workflows/ci.yml)
+[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.<RECORD>.svg)](https://doi.org/10.5281/zenodo.<RECORD>)
+[![License: MIT](https://img.shields.io/badge/License-MIT-yellow.svg)](https://opensource.org/licenses/MIT)
+-->
+
+**Comparative corpus analysis for modern Python workflows.**
+
+`pycorpdiff` is the **missing comparative layer** between R's
+[`quanteda`](https://quanteda.io/), the closed-source SketchEngine
+platform, and the fragmented Python NLP stack
+(`nltk`/`spaCy`/`gensim`/`sentence-transformers`). Three public verbs
+— `compare(a, b)`, `track(c, term)`, `compare.before_after(c, event)` —
+consolidate keyness, collocations, dispersion, temporal trajectories,
+changepoint detection, interrupted time series, causal-impact analysis,
+forecasting, online changepoint detection, and embedding-based semantic
+shift under a single notebook-native API. Every result carries its own
+KWIC evidence: `.explain(term)` returns the source-text concordances
+behind any ranked term.
+
+The package answers the questions corpus linguistics, digital humanities,
+and computational social science routinely have:
+
+- *How does corpus A differ from corpus B?* — `compare(a, b).keyness()`
+- *How has discourse around X evolved over time?* — `track(c, "x").over_time()`
+- *What did "migrant" mean in 2005 vs 2023?* — `compare(...).semantic_shift("migrant", embedder=...)`
+- *Did this event actually shift the conversation?* — `track(...).causal_impact(event_date=...)`
+- *Where is the discourse heading?* — `track(...).forecast(horizon=4)`
+
+`pycorpdiff` is positioned as **orchestration**, not reinvention.
+Tokenizers (`spaCy`, `Stanza`, `jieba`, `fugashi`) and embedders (any
+`SBERT`-compatible model) plug in via two `typing.Protocol` extension
+points — one-line adapters, no plugin registry. The base install pulls
+only `numpy`, `pandas`, `scipy`, and `pyarrow`; everything else is opt-in
+via extras.
+
+> **Status: pre-release alpha (0.1.0a0).** Public API is stable for the
+> features described below; PyPI publication is the next milestone.
+
+## The three-layer architecture
+
+| Layer | Purpose | Key surface |
+|---|---|---|
+| **1 — Ingestion + `Corpus`** | get text in, slice it, hash it | `from_dataframe`, `read_csv`, `read_parquet`, `read_txt`, `read_duckdb`, `from_huggingface`, `fetch_hansard`, `Corpus.slice/by_time/__hash__/doc_term_counts(_sparse)/to_polars` |
+| **2 — Pure math** | statistics with no I/O | `keyness.{log_likelihood,chi_squared,log_ratio,percent_diff,bayes_factor,permutation_pvalues,keyness_multi,juilland_d,benjamini_hochberg}`; `collocation.{logdice,pmi,t_score,mi_three,collocation_shift,cooccurrence_network}`; `semantic.{HashEmbedder,SBERTEmbedder,semantic_trajectory,neighborhood_drift}`; `temporal.{changepoints,interrupted_time_series,forecast,causal_impact,bocpd}` |
+| **3 — Verbs + Results** | public API | `compare`, `track`, `compare.before_after`, `keyness_multi`, plus 9 frozen-dataclass Result types each with `.to_df() / .plot() / .explain() / .summary() / .to_html() / .to_json()` |
+
+## Quick start
+
+```python
+import pycorpdiff as pcd
+
+news = pcd.from_dataframe(df, text_col="body", meta_cols=("outlet", "date"))
+
+# Compare — three verbs
+k = pcd.compare(news.slice(outlet="Guardian"), news.slice(outlet="Mail")).keyness()
+c = pcd.compare(a, b).collocation_shift("migrant")
+s = pcd.compare(a, b).semantic_shift("migrant", embedder=pcd.SBERTEmbedder())
+
+# Track over time
+tr = pcd.track(news, "migrant").over_time(freq="Y")
+tr.changepoints()                                     # offline PELT
+tr.changepoints_online(hazard=1/24)                   # Bayesian online (Adams & MacKay 2007)
+tr.interrupted_time_series(event_date="2016-06-23")   # segmented OLS
+tr.causal_impact(event_date="2016-06-23")             # Bayesian counterfactual (Brodersen 2015)
+tr.forecast(horizon=4)                                # state-space ETS
+
+# Before / after a known event
+pcd.compare.before_after(news, event_date="2016-06-23").keyness()
+
+# N-way (≥ 2 corpora)
+pcd.keyness_multi([gu, ma, te, mi], labels=["Guardian", "Mail", "Telegraph", "Mirror"])
+
+# The discourse as a graph
+pcd.cooccurrence_network(news, top_n=50).plot()
+
+# Every Result: .to_df() · .plot() · .explain() · .summary() · .to_html() · .to_json()
+```
+
+See [`examples/pycorpdiff_showcase.ipynb`](examples/pycorpdiff_showcase.ipynb)
+([rendered HTML](docs/rendered/pycorpdiff_showcase.html)) for a
+walkthrough on a synthetic UK Hansard corpus exercising every analytical
+surface.
+
+## Installation
+
+<!-- TODO post-publish: replace this block with the PyPI install commands once published. -->
+
+Currently a pre-release alpha. From a local clone:
+
+```bash
+git clone https://github.com/jturner-uofl/pycorpdiff
+cd pycorpdiff
+pip install -e ".[dev]"
+pytest -q                          # 519 default tests, ~7s
+```
+
+Optional extras: `[viz]` (altair + matplotlib + networkx), `[semantic]`
+(sentence-transformers + scikit-learn), `[temporal]` (ruptures +
+statsmodels), `[polars]`, `[duckdb]`, `[huggingface]`, `[nlp]` (spaCy),
+`[notebooks]` (jupyter + vl-convert + pysofra, for the showcase),
+or `[all]`.
+
+## Cross-validation receipts
+
+The math agrees with the standard tools — by automated test:
+
+- **Rayson's LL Wizard** — 15 hand-derived contingency-table reference triples
+- **NLTK** `BigramAssocMeasures` — PMI + t-score to ≤ 1e-12 on every adjacent bigram
+- **Scattertext (Kessler 2017)** — behavioural agreement on the 2012 US Conventions corpus
+- **quanteda (R)** via `rpy2` — byte-for-byte G² agreement (slow tier)
+- **HistWords (Hamilton et al. 2016)** — diachronic cosine displacements on COHA (slow tier)
+
+## Citation
+
+If you use `pycorpdiff` in academic work, please cite the software via
+the `CITATION.cff` file in this repository — GitHub renders a "Cite this
+repository" widget directly from it.
+
+## License
+
+MIT — see [LICENSE](LICENSE).
+
+## Further reading
+
+- [`docs/design.md`](docs/design.md) — three-layer architecture
+- [`docs/statistical-methods.md`](docs/statistical-methods.md) — every metric's formula + citation
+- [`examples/pycorpdiff_showcase.ipynb`](examples/pycorpdiff_showcase.ipynb) — full feature tour as a notebook
+- [`docs/rendered/`](docs/rendered/) — self-contained HTML renders of the example notebooks

pycorpdiff-0.1.0a0.dist-info/RECORD

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pycorpdiff-0.1.0a0.dist-info/WHEEL

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+Wheel-Version: 1.0
+Generator: hatchling 1.29.0
+Root-Is-Purelib: true
+Tag: py3-none-any

pycorpdiff-0.1.0a0.dist-info/licenses/LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2026 Jason Turner
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
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+
+The above copyright notice and this permission notice shall be included in all
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