pybiolib 1.2.980__py3-none-any.whl → 1.2.983__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- biolib/_internal/utils/multinode.py +6 -9
- {pybiolib-1.2.980.dist-info → pybiolib-1.2.983.dist-info}/METADATA +1 -1
- {pybiolib-1.2.980.dist-info → pybiolib-1.2.983.dist-info}/RECORD +6 -6
- {pybiolib-1.2.980.dist-info → pybiolib-1.2.983.dist-info}/LICENSE +0 -0
- {pybiolib-1.2.980.dist-info → pybiolib-1.2.983.dist-info}/WHEEL +0 -0
- {pybiolib-1.2.980.dist-info → pybiolib-1.2.983.dist-info}/entry_points.txt +0 -0
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@@ -86,25 +86,22 @@ def fasta_batch_records(records, work_per_batch_min, work_per_residue=1, verbose
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batches = []
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batch = []
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total_work_units = 0
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current_longest_seq_len = 0
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for record in records:
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# Add to batch
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batch.append(record)
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sequence_work_units = len(seq) * work_per_residue
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seq_len = len(record.sequence)
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current_longest_seq_len = max(current_longest_seq_len, seq_len)
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#
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current_work_units
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total_work_units += sequence_work_units
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# Calculate work units based on longest sequence * number of sequences
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current_work_units = current_longest_seq_len * work_per_residue * len(batch)
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# If above limit, start a new batch
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if current_work_units >= work_per_batch_min:
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batches.append(batch)
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batch = []
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current_longest_seq_len = 0
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# Append last batch if present
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if batch:
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@@ -51,7 +51,7 @@ biolib/_internal/types/result.py,sha256=MesSTBXCkaw8HydXgHf1OKGVLzsxhZ1KV5z4w-VI
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biolib/_internal/types/typing.py,sha256=qrsk8hHcGEbDpU1QQFzHAKnhQxkMe7uJ6pxHeAnfv1Y,414
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biolib/_internal/types/user.py,sha256=5_hYG0jrdGxynCCWXGaHZCAlVcRKBqMIEA2EBGrnpiE,439
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biolib/_internal/utils/__init__.py,sha256=p5vsIFyu-zYqBgdSMfwW9NC_jk7rXvvCbV4Bzd3As7c,630
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biolib/_internal/utils/multinode.py,sha256
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biolib/_internal/utils/multinode.py,sha256=bFj7ucQB0MgGrgtnCbFFcanwdtdBGupJIZB9sFi2Ts8,8244
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biolib/_runtime/runtime.py,sha256=Z9YVF8e2A1VMdndEf7CIGqvVKHS7FPY0VGmRgLBB7ck,5699
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biolib/_session/session.py,sha256=US1Y1jfFIAm86-Lq3C7nCXpZXUJXXBVBkND9djMNYxI,1649
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biolib/api/__init__.py,sha256=mQ4u8FijqyLzjYMezMUUbbBGNB3iFmkNdjXnWPZ7Jlw,138
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@@ -146,8 +146,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
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biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
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biolib/utils/seq_util.py,sha256=Ozk0blGtPur_D9MwShD02r_mphyQmgZkx-lOHOwnlIM,6730
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biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
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pybiolib-1.2.
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pybiolib-1.2.
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pybiolib-1.2.
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pybiolib-1.2.
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pybiolib-1.2.
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pybiolib-1.2.983.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
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pybiolib-1.2.983.dist-info/METADATA,sha256=dHtGcD9XEEKaOlFU18U9VLeynB9gYqsBuSle-Q7jKcg,1570
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pybiolib-1.2.983.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
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pybiolib-1.2.983.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
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pybiolib-1.2.983.dist-info/RECORD,,
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