pybiolib 1.2.749__py3-none-any.whl → 1.2.766__py3-none-any.whl

biolib/_runtime/runtime.py

@@ -78,16 +78,32 @@ class Runtime:
         Set BioLib result name to FASTA file name (excluding file extension) or,
         if detecting a BioLib generated name, use ID of the first sequence in the fasta file
         """
+        try:
+            # Set job name to first header if FASTA text input (random BioLib file) detected
+            if re.match('^input_[A-Za-z0-9]+.*', path_to_fasta):
+                first_id = next(SeqUtil.parse_fasta(path_to_fasta)).id
+                result_name = first_id.replace(' ', '_')[:60]
+            else:
+                result_name = Path(path_to_fasta).stem
+
+            logger.debug(f'Setting result name to "{result_name}" from {path_to_fasta}')
+            Runtime.set_result_name_prefix(result_name)
+        except Exception as e:
+            logger.warning(f'Failed to set result name from fasta file {path_to_fasta}: {str(e)}')
 
-        # Set job name to first header if FASTA text input (random BioLib file) detected
-        if re.match('^input_[A-Za-z0-9]+.*', path_to_fasta):
-            first_id = next(SeqUtil.parse_fasta(path_to_fasta)).id
-            result_name = first_id.replace(' ', '_')[:60]
-        else:
-            result_name = Path(path_to_fasta).stem
-
-        logger.debug(f'Setting result name to "{result_name}" from {path_to_fasta}')
-        Runtime.set_result_name_prefix(result_name)
+    @staticmethod
+    def set_result_name_from_file(path_to_file: str) -> None:
+        try:
+            if path_to_file.lower().endswith('.fasta'):
+                return Runtime.set_result_name_prefix_from_fasta(path_to_file)
+
+            # Set job name only if not a BioLib default name
+            if not re.match('^input_[A-Za-z0-9]+.*', path_to_file):
+                result_name = Path(path_to_file).stem[:60]
+                logger.debug(f'Setting result name to "{result_name}" from {path_to_file}')
+                Runtime.set_result_name_prefix(result_name)
+        except Exception as e:
+            logger.warning(f'Failed to set result name from file {path_to_file}: {str(e)}')
 
     @staticmethod
     def create_result_note(note: str) -> None:

{pybiolib-1.2.749.dist-info → pybiolib-1.2.766.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pybiolib
-Version: 1.2.749
+Version: 1.2.766
 Summary: BioLib Python Client
 License: MIT
 Keywords: biolib

{pybiolib-1.2.749.dist-info → pybiolib-1.2.766.dist-info}/RECORD

@@ -34,7 +34,7 @@ biolib/_internal/types/result.py,sha256=MesSTBXCkaw8HydXgHf1OKGVLzsxhZ1KV5z4w-VI
 biolib/_internal/types/typing.py,sha256=qrsk8hHcGEbDpU1QQFzHAKnhQxkMe7uJ6pxHeAnfv1Y,414
 biolib/_internal/utils/__init__.py,sha256=p5vsIFyu-zYqBgdSMfwW9NC_jk7rXvvCbV4Bzd3As7c,630
 biolib/_internal/utils/multinode.py,sha256=-J3PEAK3NaOwCn--5T7vWHkA3yu5w9QhmuhkQcH-2wY,8229
-biolib/_runtime/runtime.py,sha256=bZQ0m39R9jOBVAtlyvzDnOobKueOAQUCwMUZjDQnO7E,4439
+biolib/_runtime/runtime.py,sha256=xc4PAYyp6xlaR614taMJSQLmOKRASWYrtoMbgKpcaqQ,5306
 biolib/_session/session.py,sha256=US1Y1jfFIAm86-Lq3C7nCXpZXUJXXBVBkND9djMNYxI,1649
 biolib/api/__init__.py,sha256=mQ4u8FijqyLzjYMezMUUbbBGNB3iFmkNdjXnWPZ7Jlw,138
 biolib/api/client.py,sha256=2GpKE7QrPgyPdgJgrV7XnZByIJf1n26UCy3aoaHBs1M,7881
@@ -130,8 +130,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
 biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
 biolib/utils/seq_util.py,sha256=Ozk0blGtPur_D9MwShD02r_mphyQmgZkx-lOHOwnlIM,6730
 biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
-pybiolib-1.2.749.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
-pybiolib-1.2.749.dist-info/METADATA,sha256=hAUHVeH2pyZYFKHncVnsKqV6m2q0J29O_Qs2PUFyrIM,1570
-pybiolib-1.2.749.dist-info/WHEEL,sha256=fGIA9gx4Qxk2KDKeNJCbOEwSrmLtjWCwzBz351GyrPQ,88
-pybiolib-1.2.749.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
-pybiolib-1.2.749.dist-info/RECORD,,
+pybiolib-1.2.766.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
+pybiolib-1.2.766.dist-info/METADATA,sha256=t2TFimPTCI6m_21fBdZPmWrmii5B4zRPhn0dk4DLDWI,1570
+pybiolib-1.2.766.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
+pybiolib-1.2.766.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
+pybiolib-1.2.766.dist-info/RECORD,,

{pybiolib-1.2.749.dist-info → pybiolib-1.2.766.dist-info}/WHEEL

@@ -1,4 +1,4 @@
 Wheel-Version: 1.0
-Generator: poetry-core 2.1.2
+Generator: poetry-core 2.1.3
 Root-Is-Purelib: true
 Tag: py3-none-any