pybiolib 1.2.695__py3-none-any.whl → 1.2.701__py3-none-any.whl

biolib/_internal/llm_instructions/.github/copilot-instructions.md

@@ -5,3 +5,7 @@ Code comments should only be added for complex logic or unintuitive code that is
 Unit tests are not necessary. Tests should instead be written as simple examples demonstrating the functionality of relevant functions.
 
 Always use 4 spaces for indentation when writing code.
+
+When running BioLib Apps, use [this file](prompts/biolib_run_apps.prompt.md) as context to understand how that works.
+
+When working with BioLib App inputs, use [this file](prompts/biolib_app_inputs.prompt.md) as context to understand how the different files should be connected and formatted.

biolib/cli/init.py

@@ -15,12 +15,17 @@ def init() -> None:
     if os.path.exists(config_file_path):
         print(f'The file "{config_file_path}" already exists', file=sys.stderr)
         exit(1)
-    else:
+
+    try:
+        project_name = input('Enter a name for your project: ')
+
         os.makedirs(f'{cwd}/.biolib', exist_ok=True)
         with open(config_file_path, 'w') as config_file:
             config_file.write(templates.example_app.CONFIG_YML)
 
-    if not os.path.exists(readme_path):
-        with open(readme_path, 'w') as readme_file:
-            project_name = input('Enter a name for your project: ')
-            readme_file.write(f'# {project_name}\n')
+        if not os.path.exists(readme_path):
+            with open(readme_path, 'w') as readme_file:
+                readme_file.write(f'# {project_name}\n')
+    except KeyboardInterrupt:
+        print('\nInit command cancelled.', file=sys.stderr)
+        exit(1)

{pybiolib-1.2.695.dist-info → pybiolib-1.2.701.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pybiolib
-Version: 1.2.695
+Version: 1.2.701
 Summary: BioLib Python Client
 License: MIT
 Keywords: biolib

{pybiolib-1.2.695.dist-info → pybiolib-1.2.701.dist-info}/RECORD

@@ -13,7 +13,7 @@ biolib/_internal/lfs/__init__.py,sha256=gSWo_xg61UniYgD7yNYxeT4I9uaXBCBSi3_nmZjn
 biolib/_internal/lfs/cache.py,sha256=pQS2np21rdJ6I3DpoOutnzPHpLOZgUIS8TMltUJk_k4,2226
 biolib/_internal/libs/__init__.py,sha256=Jdf4tNPqe_oIIf6zYml6TiqhL_02Vyqwge6IELrAFhw,98
 biolib/_internal/libs/fusepy/__init__.py,sha256=AWDzNFS-XV_5yKb0Qx7kggIhPzq1nj_BZS5y2Nso08k,41944
-biolib/_internal/llm_instructions/.github/copilot-instructions.md,sha256=7xW_wXe-2QAJnMnyANGLd_RTB7Nw0BX_2crKLQUUMYc,403
+biolib/_internal/llm_instructions/.github/copilot-instructions.md,sha256=OAaZIipjpTA7_9dVygvLejdJRz5Gu1jOlT8bMsZh71c,697
 biolib/_internal/llm_instructions/.github/prompts/biolib_app_inputs.prompt.md,sha256=DcBUNaViuNfXoomj-IVUcIcBtJlXuIYOroUfDM_R6wU,3212
 biolib/_internal/llm_instructions/.github/prompts/biolib_run_apps.prompt.md,sha256=HYv-MgpQKIU7Hv90SvZ3tqXY6KWxYVnqamXDRyInOHM,7926
 biolib/_internal/llm_instructions/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -67,7 +67,7 @@ biolib/cli/__init__.py,sha256=IHC2bEyA27pvgp-18SGfFVJOP456elanz7suDP8D084,1316
 biolib/cli/auth.py,sha256=rpWGmXs6Fz6CGrO9K8ibPRszOdXG78Vig_boKaVCD9A,2082
 biolib/cli/data_record.py,sha256=t8DfJK2EZ_SNZ9drDA_N5Jqy8DNwf9f5SlFrIaOvtv0,3501
 biolib/cli/download_container.py,sha256=HIZVHOPmslGE5M2Dsp9r2cCkAEJx__vcsDz5Wt5LRos,483
-biolib/cli/init.py,sha256=wQOfii_au-d30Hp7DdH-WVw-WVraKvA_zY4za1w7DE8,821
+biolib/cli/init.py,sha256=GBMSrRAgNISqyqyisF2cYrKioTXJqFgkwASgA8VLnXc,936
 biolib/cli/lfs.py,sha256=z2qHUwink85mv9yDgifbVKkVwuyknGhMDTfly_gLKJM,4151
 biolib/cli/push.py,sha256=RxB4RHpjtL27Fpq7WRGojJ53R9jUuE1Cq9_NmHFzNsM,1306
 biolib/cli/run.py,sha256=MCo0ZqW2pHBxOoCI3i5gAx5D0auW9fmxHqkAF4TRhms,2134
@@ -126,8 +126,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
 biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
 biolib/utils/seq_util.py,sha256=Ozk0blGtPur_D9MwShD02r_mphyQmgZkx-lOHOwnlIM,6730
 biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
-pybiolib-1.2.695.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
-pybiolib-1.2.695.dist-info/METADATA,sha256=s2pT0xaDCsV1lBAcfsLyCiSLFXx61Wtjtpc3GKqKm58,1570
-pybiolib-1.2.695.dist-info/WHEEL,sha256=fGIA9gx4Qxk2KDKeNJCbOEwSrmLtjWCwzBz351GyrPQ,88
-pybiolib-1.2.695.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
-pybiolib-1.2.695.dist-info/RECORD,,
+pybiolib-1.2.701.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
+pybiolib-1.2.701.dist-info/METADATA,sha256=r4sy2tMZgB6dLiUiCnJAPjL-cuw09JWJvayRQIAMsE8,1570
+pybiolib-1.2.701.dist-info/WHEEL,sha256=fGIA9gx4Qxk2KDKeNJCbOEwSrmLtjWCwzBz351GyrPQ,88
+pybiolib-1.2.701.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
+pybiolib-1.2.701.dist-info/RECORD,,