pybiolib 1.2.465.dev1__py3-none-any.whl → 1.2.497__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -4,6 +4,7 @@ from pathlib import Path
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  from biolib._internal.types.data_record import SqliteV1DatabaseSchema
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  from biolib.api import client as api_client
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  from biolib.biolib_api_client import AppGetResponse
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+ from biolib.biolib_api_client.biolib_app_api import _get_app_uri_from_str
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  from biolib.biolib_api_client.lfs_types import DataRecordVersionInfo
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@@ -82,9 +83,11 @@ def verify_schema(specification: SqliteV1DatabaseSchema, actual_schema: SqliteV1
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  def get_data_record_state_from_uri(uri) -> 'DataRecordVersionInfo':
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- app_response: AppGetResponse = api_client.get(path='/app/', params={'uri': uri}).json()
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+ normalized_uri = _get_app_uri_from_str(uri)
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+ app_response: AppGetResponse = api_client.get(path='/app/', params={'uri': normalized_uri}).json()
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+ resource_uri = app_response['app_version']['app_uri']
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  if app_response['app']['type'] != 'data-record':
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- raise Exception(f'Resource "{uri}" is not a Data Record')
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+ raise Exception(f'Resource "{resource_uri}" is not a Data Record')
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  return DataRecordVersionInfo(
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  resource_uri=app_response['app_version']['app_uri'],
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  resource_uuid=app_response['app']['public_id'],
biolib/jobs/job.py CHANGED
@@ -217,6 +217,19 @@ class Job:
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  except Exception as error:
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  logger.error(f'Failed to cancel job {self._uuid} due to: {error}')
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+ def rename(self, name: str) -> None:
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+ try:
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+ api.client.patch(
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+ path=f'/jobs/{self._uuid}/main_result/',
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+ headers={'Job-Auth-Token': self._auth_token} if self._auth_token else None,
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+ data={'result_name_prefix': name},
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+ )
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+ self._refetch_job_dict(force_refetch=True)
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+ updated_name = self.get_name()
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+ logger.info(f'Job {self._uuid} renamed to "{updated_name}"')
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+ except Exception as error:
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+ raise BioLibError(f'Failed to rename job {self._uuid} due to: {error}') from error
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+
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  def recompute(self, app_uri: Optional[str] = None, machine: Optional[str] = None, blocking: bool = True) -> 'Job':
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  app_response = BiolibAppApi.get_by_uri(uri=app_uri or self._job_dict['app_uri'])
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.3
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  Name: pybiolib
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- Version: 1.2.465.dev1
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+ Version: 1.2.497
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  Summary: BioLib Python Client
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  License: MIT
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  Keywords: biolib
@@ -2,7 +2,7 @@ biolib/__init__.py,sha256=4Rfa0AJKztqkCG5D67kFgSwdOUiBTa5HkAzIOqHNREU,4431
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  biolib/_data_record/data_record.py,sha256=zKvnh5T-dIVY46-kgVzMBoZ666ZhcTCFQnWvZT0D6RM,12026
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  biolib/_internal/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  biolib/_internal/data_record/__init__.py,sha256=fGdME6JGRU_2VxpJbYpGXYndjN-feUkmKY4fuMyq3cg,76
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- biolib/_internal/data_record/data_record.py,sha256=g_-jdy5-Zem3dthwxJj2OuQqkDGTyc-iGqN1rtYYD1A,4418
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+ biolib/_internal/data_record/data_record.py,sha256=SD3-tKQY2RZv9ZSVNUhd2ISDYV64Fk1Sc642qyf_Vis,4618
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  biolib/_internal/data_record/push_data.py,sha256=-L3a_7zZzDCXabBu3O4lWPMAMeBbeRPTrBlEM-_5SCI,2693
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  biolib/_internal/data_record/remote_storage_endpoint.py,sha256=eCptuZ4DMAPnaNCVDvpWXwXGI6Jac9U1N5dqU8Cj95Q,1732
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  biolib/_internal/file_utils.py,sha256=4jT6j7bB21c0JNn5BfnyWQib_zt0CVtJ_TiOFOStRcE,2604
@@ -101,7 +101,7 @@ biolib/compute_node/webserver/worker_thread.py,sha256=7uD9yQPhePYvP2HCJ27EeZ_h6p
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  biolib/experiments/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  biolib/experiments/experiment.py,sha256=V1_UtcDm2ydxDjOlk0N7bv1jGTAb06psflAYcqbo0sY,8559
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  biolib/jobs/__init__.py,sha256=aIb2H2DHjQbM2Bs-dysFijhwFcL58Blp0Co0gimED3w,32
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- biolib/jobs/job.py,sha256=UAAqMtncarYQIMaJxO94pjQay9WEwrkMNI6suB8RsGs,20856
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+ biolib/jobs/job.py,sha256=edKfRiojv6f4sLzz1YfJupwvHL2zuh7L_2v_3a4gSCI,21456
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  biolib/jobs/job_result.py,sha256=rALHiKYNaC9lHi_JJqBob1RubzNLwG9Z386kwRJjd2M,5885
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  biolib/jobs/types.py,sha256=ezvaoTANsWazK6PmfpYcqezdfjP7MNBEBfqIZGoZhz8,997
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  biolib/runtime/__init__.py,sha256=MlRepA11n2H-3plB5rzWyyHK2JmP6PiaP3i6x3vt0mg,506
@@ -118,8 +118,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
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  biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
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  biolib/utils/seq_util.py,sha256=Ozk0blGtPur_D9MwShD02r_mphyQmgZkx-lOHOwnlIM,6730
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  biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
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- pybiolib-1.2.465.dev1.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
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- pybiolib-1.2.465.dev1.dist-info/METADATA,sha256=3EdZZrh9-PF72JOSO_chduOMaAnwNv6V7CU2A38wM3w,1575
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- pybiolib-1.2.465.dev1.dist-info/WHEEL,sha256=IYZQI976HJqqOpQU6PHkJ8fb3tMNBFjg-Cn-pwAbaFM,88
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- pybiolib-1.2.465.dev1.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
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- pybiolib-1.2.465.dev1.dist-info/RECORD,,
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+ pybiolib-1.2.497.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
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+ pybiolib-1.2.497.dist-info/METADATA,sha256=cLndAddMgPktyIsce8NU-Jb9c0bR_WaG3FVGo-YjUl8,1570
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+ pybiolib-1.2.497.dist-info/WHEEL,sha256=XbeZDeTWKc1w7CSIyre5aMDU_-PohRwTQceYnisIYYY,88
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+ pybiolib-1.2.497.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
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+ pybiolib-1.2.497.dist-info/RECORD,,
@@ -1,4 +1,4 @@
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  Wheel-Version: 1.0
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- Generator: poetry-core 2.0.1
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+ Generator: poetry-core 2.1.1
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  Root-Is-Purelib: true
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  Tag: py3-none-any