pybiolib 1.2.1144__py3-none-any.whl → 1.2.1153__py3-none-any.whl

biolib/_data_record/data_record.py

@@ -284,3 +284,16 @@ class DataRecord:
 
     def _get_detailed_dict(self) -> types.DataRecordDetailedDict:
         return cast(types.DataRecordDetailedDict, api_client.get(f'/resources/data-records/{self.uuid}/').json())
+
+    def delete(self) -> None:
+        """Delete the data record.
+
+        Example::
+            >>> record = DataRecord.get_by_uri("account/data-record")
+            >>> record.delete()
+        """
+        try:
+            api_client.delete(path=f'/apps/{self.uuid}/')
+            logger.info(f'Data record {self.uri} deleted')
+        except Exception as error:
+            raise Exception(f'Failed to delete data record {self.uri} due to: {error}') from error

biolib/biolib_api_client/biolib_app_api.py

@@ -57,6 +57,22 @@ def _get_git_branch_name() -> str:
         return ''
 
 
+def _get_git_commit_hash() -> str:
+    try:
+        github_actions_commit_hash = os.getenv('GITHUB_SHA')
+        if github_actions_commit_hash:
+            return github_actions_commit_hash
+
+        gitlab_ci_commit_hash = os.getenv('CI_COMMIT_SHA')
+        if gitlab_ci_commit_hash:
+            return gitlab_ci_commit_hash
+
+        result = subprocess.run(['git', 'rev-parse', 'HEAD'], check=True, stdout=subprocess.PIPE, text=True)
+        return result.stdout.strip()
+    except BaseException:
+        return ''
+
+
 def _get_git_repository_url() -> str:
     try:
         result = subprocess.run(['git', 'remote', 'get-url', 'origin'], check=True, stdout=subprocess.PIPE, text=True)
@@ -125,6 +141,7 @@ class BiolibAppApi:
                 'state': 'published',
                 'app_version_id_to_copy_images_from': app_version_id_to_copy_images_from,
                 'git_branch_name': _get_git_branch_name(),
+                'git_commit_hash': _get_git_commit_hash(),
                 'git_repository_url': _get_git_repository_url(),
             }
             if semantic_version:

biolib/cli/data_record.py

@@ -80,3 +80,20 @@ def describe(uri: str, output_as_json: bool) -> None:
             size_string = str(file_info['size_bytes'])
             leading_space_string = ' ' * (10 - len(size_string))
             print(f"{leading_space_string}{size_string}    {file_info['path']}")
+
+
+@data_record.command(help='Delete a Data Record')
+@click.argument('uri', required=True)
+def delete(uri: str) -> None:
+    record = DataRecord.get_by_uri(uri=uri)
+
+    print(f'You are about to delete the data record: {record.uri}')
+    print('This action cannot be undone.')
+
+    confirmation = input(f'To confirm deletion, please type the data record name "{record.name}": ')
+    if confirmation != record.name:
+        print('Data record name does not match. Deletion cancelled.')
+        return
+
+    record.delete()
+    print(f'Data record {record.uri} has been deleted.')

{pybiolib-1.2.1144.dist-info → pybiolib-1.2.1153.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pybiolib
-Version: 1.2.1144
+Version: 1.2.1153
 Summary: BioLib Python Client
 License: MIT
 Keywords: biolib

{pybiolib-1.2.1144.dist-info → pybiolib-1.2.1153.dist-info}/RECORD

@@ -1,5 +1,5 @@
 biolib/__init__.py,sha256=o0cpNzP7OwPYfdw5Cq-XgsMYooQdQynZTUO3W-LFuKo,10657
-biolib/_data_record/data_record.py,sha256=zKvnh5T-dIVY46-kgVzMBoZ666ZhcTCFQnWvZT0D6RM,12026
+biolib/_data_record/data_record.py,sha256=BM2WEBnn13reSiAqhBtcV8FLewFWSTcMmFV0bD74bM0,12489
 biolib/_internal/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 biolib/_internal/add_copilot_prompts.py,sha256=wcIdrceFcfKSoEjvM4uNzhKZ0I1-MCFkfNO4duqtGHA,1861
 biolib/_internal/add_gui_files.py,sha256=MrtvkIpe70tVVJYBBsMbRhjsxf55hFzlzn-ea2oinTc,2218
@@ -72,7 +72,7 @@ biolib/biolib_api_client/__init__.py,sha256=E5EMa19wJoblwSdQPYrxc_BtIeRsAuO0L_jQ
 biolib/biolib_api_client/api_client.py,sha256=IONzXeFCHl4wuct6fqOC_7NiTv_zFy6ys0hsAtvLzTA,7578
 biolib/biolib_api_client/app_types.py,sha256=P2MbwYZ0VsPUcbcX27lSvVlAYSbkz_IqWTcbxFyuu7I,2477
 biolib/biolib_api_client/auth.py,sha256=kjm0ZHnH3I8so3su2sZbBxNHYp-ZUdrZ5lwQ0K36RSw,949
-biolib/biolib_api_client/biolib_app_api.py,sha256=N8l6tDsLy7CUNZ3z6hoa2vYlQ_g4Y43udLbinigZz-4,5464
+biolib/biolib_api_client/biolib_app_api.py,sha256=slnJVuWtN_Et1PSnjN7mPmYWJvk0Rp-h0rvdrW1R9u8,6041
 biolib/biolib_api_client/biolib_job_api.py,sha256=3Hzv5Os4d377pKrCzg3i7c5xiy9FiqeVssub690GLdA,7423
 biolib/biolib_api_client/common_types.py,sha256=RH-1KNHqUF-EkTpfPOSTt5Mq1GPdfju_cqXDesscO1I,123
 biolib/biolib_api_client/job_types.py,sha256=yBdBwjharbQJuXCi2xKMi0t_r6XxnbWnkchHekTpCJY,1351
@@ -96,7 +96,7 @@ biolib/biolib_errors.py,sha256=eyQolC4oGi350BDEMOd-gAHYVqo2L2lYgv6c4ZdXPjQ,1184
 biolib/biolib_logging.py,sha256=Y3qALGNYaTHdXP2aPFNWfxN71pk2Z3syMG6XrYcRZT8,2863
 biolib/cli/__init__.py,sha256=IHC2bEyA27pvgp-18SGfFVJOP456elanz7suDP8D084,1316
 biolib/cli/auth.py,sha256=p9ZGY6ld2rnMbpsuRskvIQJNUHlSgYgcLTDsYGyUwyw,1407
-biolib/cli/data_record.py,sha256=t8DfJK2EZ_SNZ9drDA_N5Jqy8DNwf9f5SlFrIaOvtv0,3501
+biolib/cli/data_record.py,sha256=ypNr-MK_3bvJv0wkZ4V1p_4cU9gfGvFoeXTtghnhrQE,4078
 biolib/cli/download_container.py,sha256=HIZVHOPmslGE5M2Dsp9r2cCkAEJx__vcsDz5Wt5LRos,483
 biolib/cli/init.py,sha256=oGo178h_GlDieWjBqHDLAejeUhVKm5ZJnI_o2YqbEZ0,8366
 biolib/cli/lfs.py,sha256=z2qHUwink85mv9yDgifbVKkVwuyknGhMDTfly_gLKJM,4151
@@ -157,8 +157,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
 biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
 biolib/utils/seq_util.py,sha256=Ozk0blGtPur_D9MwShD02r_mphyQmgZkx-lOHOwnlIM,6730
 biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
-pybiolib-1.2.1144.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
-pybiolib-1.2.1144.dist-info/METADATA,sha256=WPrOMwzh3qoKo6NEAXTbvhA28V0mhgd8bNOJ-W_vKOM,1571
-pybiolib-1.2.1144.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
-pybiolib-1.2.1144.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
-pybiolib-1.2.1144.dist-info/RECORD,,
+pybiolib-1.2.1153.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
+pybiolib-1.2.1153.dist-info/METADATA,sha256=Xy3vY_DtiT1n_r_YYF0bIJS63hVe6ShZEZ4CsnBg8lU,1571
+pybiolib-1.2.1153.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
+pybiolib-1.2.1153.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
+pybiolib-1.2.1153.dist-info/RECORD,,