pybiolib 1.2.1139__py3-none-any.whl → 1.2.1151__py3-none-any.whl

biolib/_data_record/data_record.py

@@ -284,3 +284,16 @@ class DataRecord:
 
     def _get_detailed_dict(self) -> types.DataRecordDetailedDict:
         return cast(types.DataRecordDetailedDict, api_client.get(f'/resources/data-records/{self.uuid}/').json())
+
+    def delete(self) -> None:
+        """Delete the data record.
+
+        Example::
+            >>> record = DataRecord.get_by_uri("account/data-record")
+            >>> record.delete()
+        """
+        try:
+            api_client.delete(path=f'/apps/{self.uuid}/')
+            logger.info(f'Data record {self.uri} deleted')
+        except Exception as error:
+            raise Exception(f'Failed to delete data record {self.uri} due to: {error}') from error

biolib/app/app.py

@@ -1,3 +1,4 @@
+import copy
 import io
 import json
 import os
@@ -152,6 +153,8 @@ Example: "app.cli('--help')"
     def _get_serialized_module_input(args=None, stdin=None, files=None) -> bytes:
         if args is None:
             args = []
+        else:
+            args = copy.copy(args)
 
         if stdin is None:
             stdin = b''

biolib/cli/data_record.py

@@ -80,3 +80,20 @@ def describe(uri: str, output_as_json: bool) -> None:
             size_string = str(file_info['size_bytes'])
             leading_space_string = ' ' * (10 - len(size_string))
             print(f"{leading_space_string}{size_string}    {file_info['path']}")
+
+
+@data_record.command(help='Delete a Data Record')
+@click.argument('uri', required=True)
+def delete(uri: str) -> None:
+    record = DataRecord.get_by_uri(uri=uri)
+
+    print(f'You are about to delete the data record: {record.uri}')
+    print('This action cannot be undone.')
+
+    confirmation = input(f'To confirm deletion, please type the data record name "{record.name}": ')
+    if confirmation != record.name:
+        print('Data record name does not match. Deletion cancelled.')
+        return
+
+    record.delete()
+    print(f'Data record {record.uri} has been deleted.')

{pybiolib-1.2.1139.dist-info → pybiolib-1.2.1151.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: pybiolib
-Version: 1.2.1139
+Version: 1.2.1151
 Summary: BioLib Python Client
 License: MIT
 Keywords: biolib

{pybiolib-1.2.1139.dist-info → pybiolib-1.2.1151.dist-info}/RECORD

@@ -1,5 +1,5 @@
 biolib/__init__.py,sha256=o0cpNzP7OwPYfdw5Cq-XgsMYooQdQynZTUO3W-LFuKo,10657
-biolib/_data_record/data_record.py,sha256=zKvnh5T-dIVY46-kgVzMBoZ666ZhcTCFQnWvZT0D6RM,12026
+biolib/_data_record/data_record.py,sha256=BM2WEBnn13reSiAqhBtcV8FLewFWSTcMmFV0bD74bM0,12489
 biolib/_internal/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 biolib/_internal/add_copilot_prompts.py,sha256=wcIdrceFcfKSoEjvM4uNzhKZ0I1-MCFkfNO4duqtGHA,1861
 biolib/_internal/add_gui_files.py,sha256=MrtvkIpe70tVVJYBBsMbRhjsxf55hFzlzn-ea2oinTc,2218
@@ -66,7 +66,7 @@ biolib/_session/session.py,sha256=US1Y1jfFIAm86-Lq3C7nCXpZXUJXXBVBkND9djMNYxI,16
 biolib/api/__init__.py,sha256=mQ4u8FijqyLzjYMezMUUbbBGNB3iFmkNdjXnWPZ7Jlw,138
 biolib/api/client.py,sha256=2GpKE7QrPgyPdgJgrV7XnZByIJf1n26UCy3aoaHBs1M,7881
 biolib/app/__init__.py,sha256=cdPtcfb_U-bxb9iSL4fCEq2rpD9OjkyY4W-Zw60B0LI,37
-biolib/app/app.py,sha256=E4PuwMWiWujQQzHQcq7MfVEZV-q6uKAbwBLr0ZPY5Dk,11825
+biolib/app/app.py,sha256=FGGi4jfjHpku3n60ZNJFKjEfLkrlwo1vqGdRO9nsrMw,11886
 biolib/app/search_apps.py,sha256=K4a41f5XIWth2BWI7OffASgIsD0ko8elCax8YL2igaY,1470
 biolib/biolib_api_client/__init__.py,sha256=E5EMa19wJoblwSdQPYrxc_BtIeRsAuO0L_jQweWw-Yk,182
 biolib/biolib_api_client/api_client.py,sha256=IONzXeFCHl4wuct6fqOC_7NiTv_zFy6ys0hsAtvLzTA,7578
@@ -96,7 +96,7 @@ biolib/biolib_errors.py,sha256=eyQolC4oGi350BDEMOd-gAHYVqo2L2lYgv6c4ZdXPjQ,1184
 biolib/biolib_logging.py,sha256=Y3qALGNYaTHdXP2aPFNWfxN71pk2Z3syMG6XrYcRZT8,2863
 biolib/cli/__init__.py,sha256=IHC2bEyA27pvgp-18SGfFVJOP456elanz7suDP8D084,1316
 biolib/cli/auth.py,sha256=p9ZGY6ld2rnMbpsuRskvIQJNUHlSgYgcLTDsYGyUwyw,1407
-biolib/cli/data_record.py,sha256=t8DfJK2EZ_SNZ9drDA_N5Jqy8DNwf9f5SlFrIaOvtv0,3501
+biolib/cli/data_record.py,sha256=ypNr-MK_3bvJv0wkZ4V1p_4cU9gfGvFoeXTtghnhrQE,4078
 biolib/cli/download_container.py,sha256=HIZVHOPmslGE5M2Dsp9r2cCkAEJx__vcsDz5Wt5LRos,483
 biolib/cli/init.py,sha256=oGo178h_GlDieWjBqHDLAejeUhVKm5ZJnI_o2YqbEZ0,8366
 biolib/cli/lfs.py,sha256=z2qHUwink85mv9yDgifbVKkVwuyknGhMDTfly_gLKJM,4151
@@ -157,8 +157,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
 biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
 biolib/utils/seq_util.py,sha256=Ozk0blGtPur_D9MwShD02r_mphyQmgZkx-lOHOwnlIM,6730
 biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
-pybiolib-1.2.1139.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
-pybiolib-1.2.1139.dist-info/METADATA,sha256=O0nc6m8B_UHjsa0jtKm56wMwmAOjRYTisa5Rw6pxSLU,1571
-pybiolib-1.2.1139.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
-pybiolib-1.2.1139.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
-pybiolib-1.2.1139.dist-info/RECORD,,
+pybiolib-1.2.1151.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
+pybiolib-1.2.1151.dist-info/METADATA,sha256=Bh16IOuD7nJW0zGBpjUyvyjDw1TjVsvFNybYupwZ_Cs,1571
+pybiolib-1.2.1151.dist-info/WHEEL,sha256=b4K_helf-jlQoXBBETfwnf4B04YC67LOev0jo4fX5m8,88
+pybiolib-1.2.1151.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
+pybiolib-1.2.1151.dist-info/RECORD,,