pybiolib 1.1.2011__py3-none-any.whl → 1.1.2017__py3-none-any.whl

biolib/api/client.py

@@ -42,13 +42,20 @@ class ApiClient(HttpClient):
             url=self._get_absolute_url(path=path, query_params=None),
         )
 
-    def patch(self, path: str, data: Dict, headers: OptionalHeaders = None, retries: int = 5) -> HttpResponse:
+    def patch(
+        self,
+        path: str,
+        data: Dict,
+        headers: OptionalHeaders = None,
+        retries: int = 5,
+        params: Optional[Dict[str, Union[str, int]]] = None,
+    ) -> HttpResponse:
         return self.request(
             data=data,
             headers=self._get_headers(opt_headers=headers, authenticate=True),
             method='PATCH',
             retries=retries,
-            url=self._get_absolute_url(path=path, query_params=None),
+            url=self._get_absolute_url(path=path, query_params=params),
         )
 
     @staticmethod

biolib/experiments/experiment.py

@@ -151,6 +151,10 @@ class Experiment:
 
         return jobs
 
+    def rename(self, new_name: str) -> None:
+        api.client.patch(f'/apps/{self.uuid}/', data={'name': new_name}, params={'resource_type': 'experiment'})
+        self._refetch_experiment_dict()
+
     def _create_in_backend_or_get_experiment_dict(self, name: str) -> ExperimentDict:
         # This endpoint returns experiment dict if already created
         experiment_dict: ExperimentDict = api.client.post(path='/experiments/', data={'name': name}).json()

biolib/jobs/job_result.py

@@ -75,7 +75,9 @@ class JobResult:
                 dir_path.mkdir(parents=True, exist_ok=True)
 
             # write content to temporary (partial) file
-            partial_path = destination_file_path.with_suffix(f'.{self._job_uuid}.partial_biolib_download')
+            partial_path = destination_file_path.with_suffix(
+                destination_file_path.suffix + f'.{self._job_uuid}.partial_biolib_download'
+            )
             file_start = file.start
             data_to_download = file.length
             if partial_path.exists():

{pybiolib-1.1.2011.dist-info → pybiolib-1.1.2017.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: pybiolib
-Version: 1.1.2011
+Version: 1.1.2017
 Summary: BioLib Python Client
 Home-page: https://github.com/biolib
 License: MIT

{pybiolib-1.1.2011.dist-info → pybiolib-1.1.2017.dist-info}/RECORD

@@ -14,7 +14,7 @@ biolib/_internal/push_application.py,sha256=H1PGNtVJ0vRC0li39gFMpPpjm6QeZ8Ob-7cL
 biolib/_internal/runtime.py,sha256=BnFvRWYnxPXCgOtfxupN255Zxx9Gw6oPZyzUIGODw3k,3060
 biolib/_internal/utils/__init__.py,sha256=p5vsIFyu-zYqBgdSMfwW9NC_jk7rXvvCbV4Bzd3As7c,630
 biolib/api/__init__.py,sha256=iIO8ZRdn7YDhY5cR47-Wo1YsNOK8H6RN6jn8yor5WJI,137
-biolib/api/client.py,sha256=MtDkH2Amr2Fko-bCR5DdookJu0yZ1q-6K_PPg4KK_Ek,2941
+biolib/api/client.py,sha256=-8Rwe-3WLyRbod4i70nM9_t7PqC1NucrHwgbTxfCA18,3051
 biolib/app/__init__.py,sha256=cdPtcfb_U-bxb9iSL4fCEq2rpD9OjkyY4W-Zw60B0LI,37
 biolib/app/app.py,sha256=8AvPYL1W2wxQ7t7BB2KeVU2WPrm3UL6vVuHPGs8g9L0,8388
 biolib/app/search_apps.py,sha256=K4a41f5XIWth2BWI7OffASgIsD0ko8elCax8YL2igaY,1470
@@ -86,11 +86,11 @@ biolib/compute_node/webserver/webserver_types.py,sha256=Vmt1ZDecYhGBVEYWcW1DVxee
 biolib/compute_node/webserver/webserver_utils.py,sha256=XWvwYPbWNR3qS0FYbLLp-MDDfVk0QdaAmg3xPrT0H2s,4234
 biolib/compute_node/webserver/worker_thread.py,sha256=26tG73TADnOcXsAr7Iyf6smrLlCqB4x-vvmpUb8WqnA,11569
 biolib/experiments/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-biolib/experiments/experiment.py,sha256=_ied3A3U6NFa6_ewEYn2TCozqeHvDxDqdRhMtZbFL-M,6380
+biolib/experiments/experiment.py,sha256=aQZX39fnO0yer376aygR5XvkYJnSAGmRf6N1bBM5KIM,6579
 biolib/experiments/types.py,sha256=n9GxdFA7cLMfHvLLqLmZzX31ELeSSkMXFoEEdFsdWGY,171
 biolib/jobs/__init__.py,sha256=aIb2H2DHjQbM2Bs-dysFijhwFcL58Blp0Co0gimED3w,32
 biolib/jobs/job.py,sha256=aWKnf_2pYdr76gh3hxPiVs2iuXlpwZkKPTK81Pz4G2U,19072
-biolib/jobs/job_result.py,sha256=IaSKb9B33zTnMq8CQBRB8_FTc8uYqJU8Amag8bcwyvE,5799
+biolib/jobs/job_result.py,sha256=qj4H8LQFtHqJzLik0lvpZDAIXJptalIwqt7CvpXAB9g,5860
 biolib/jobs/types.py,sha256=qhadtH2KDC2WUOOqPiwke0YgtQY4FtuB71Stekq1k48,970
 biolib/lfs/__init__.py,sha256=Qv8vdYeK43JecT4SsE93ZYE2VmNiZENdNpW8P9-omxs,115
 biolib/lfs/cache.py,sha256=pQS2np21rdJ6I3DpoOutnzPHpLOZgUIS8TMltUJk_k4,2226
@@ -109,8 +109,8 @@ biolib/utils/cache_state.py,sha256=u256F37QSRIVwqKlbnCyzAX4EMI-kl6Dwu6qwj-Qmag,3
 biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
 biolib/utils/seq_util.py,sha256=jC5WhH63FTD7SLFJbxQGA2hOt9NTwq9zHl_BEec1Z0c,4907
 biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
-pybiolib-1.1.2011.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
-pybiolib-1.1.2011.dist-info/METADATA,sha256=nzajC4HmYF0zf_amvrcgobGbTs-_DAp2pmfKkoRvG50,1508
-pybiolib-1.1.2011.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
-pybiolib-1.1.2011.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
-pybiolib-1.1.2011.dist-info/RECORD,,
+pybiolib-1.1.2017.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
+pybiolib-1.1.2017.dist-info/METADATA,sha256=7yd67jkWUKoSiuTb6hvv-YSQ4ocGeqpI-kxytLqdMHY,1508
+pybiolib-1.1.2017.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
+pybiolib-1.1.2017.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
+pybiolib-1.1.2017.dist-info/RECORD,,