pybiolib 1.1.1749__py3-none-any.whl → 1.1.1755__py3-none-any.whl

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Files changed (8) hide show
  1. biolib/biolib_api_client/app_types.py +1 -0
  2. biolib/compute_node/job_worker/job_worker.py +3 -1
  3. biolib/compute_node/remote_host_proxy.py +10 -1
  4. {pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/METADATA +1 -1
  5. {pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/RECORD +8 -8
  6. {pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/WHEEL +1 -1
  7. {pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/LICENSE +0 -0
  8. {pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/entry_points.txt +0 -0
biolib/biolib_api_client/app_types.py CHANGED
@@ -99,6 +99,7 @@ class _AppVersionOnJob(TypedDict):
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  class AppOnJob(TypedDict):
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  allow_client_side_execution: bool
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+ can_push_data_record_for_user: bool
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  state: Literal['public', 'draft']
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biolib/compute_node/job_worker/job_worker.py CHANGED
@@ -246,6 +246,7 @@ class JobWorker:
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  def _start_network_and_remote_host_proxies(self, job: CreatedJobDict) -> None:
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  app_version = job['app_version']
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+ app = app_version.get('app', {})
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  job_id = job['public_id']
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  remote_hosts = app_version['remote_hosts']
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  if utils.IS_RUNNING_IN_CLOUD:
@@ -307,7 +308,8 @@ class JobWorker:
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  self._public_network,
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  self._internal_network,
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  job_id,
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- ports
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+ ports,
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+ can_push_data_record_for_user=app.get('can_push_data_record_for_user', False),
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  )
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  remote_host_proxy.start()
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  self._remote_host_proxies.append(remote_host_proxy)
biolib/compute_node/remote_host_proxy.py CHANGED
@@ -31,8 +31,10 @@ class RemoteHostProxy:
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  public_network: Network,
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  internal_network: Optional[Network],
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  job_id: str,
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- ports: List[int]
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+ ports: List[int],
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+ can_push_data_record_for_user: bool,
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  ):
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+ self._can_push_data_record_for_user: bool = can_push_data_record_for_user
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  self.is_app_caller_proxy = remote_host['hostname'] == 'AppCallerProxy'
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  # Default to port 443 for now until backend serves remote_hosts with port specified
@@ -279,6 +281,13 @@ http {{
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  proxy_ssl_server_name on;
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  }}
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+ location /api/lfs/ {{
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+ proxy_pass {base_url}/api/lfs/;
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+ proxy_set_header authorization {'$bearer_token_on_post' if self._can_push_data_record_for_user else '""'};
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+ proxy_set_header cookie "";
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+ proxy_ssl_server_name on;
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+ }}
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+
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  location /api/ {{
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  proxy_pass {base_url}/api/;
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  proxy_set_header authorization "";
{pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: pybiolib
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- Version: 1.1.1749
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+ Version: 1.1.1755
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  Summary: BioLib Python Client
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  Home-page: https://github.com/biolib
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  License: MIT
{pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/RECORD RENAMED
@@ -11,7 +11,7 @@ biolib/app/app.py,sha256=r63gDoH1s8uQOGITmiKOVIrYDYdMrB5nwXHNRt2Da2M,10197
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  biolib/app/search_apps.py,sha256=CIanvDebNpMtWck0w4IoR_tRZ6LpSWC8DPxXW2e6Ww4,1495
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  biolib/biolib_api_client/__init__.py,sha256=E5EMa19wJoblwSdQPYrxc_BtIeRsAuO0L_jQweWw-Yk,182
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  biolib/biolib_api_client/api_client.py,sha256=oaLqTb208TLRVW4-h_va734TrVDRD3kLpFJ93cwQTxk,7130
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- biolib/biolib_api_client/app_types.py,sha256=vEjkpMwaMfz8MxBBZQfWCkxqT7NXxWocB_Oe9WHjJ_g,2425
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+ biolib/biolib_api_client/app_types.py,sha256=rEw4HICV7ujdmlzM3BjRcMNMbiYItliivpH0rkeJx4s,2465
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  biolib/biolib_api_client/auth.py,sha256=kjm0ZHnH3I8so3su2sZbBxNHYp-ZUdrZ5lwQ0K36RSw,949
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  biolib/biolib_api_client/biolib_account_api.py,sha256=sHng5jDvSktv6tOLKU8wJRieidY2kLxRU8hI_6ZauXE,210
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  biolib/biolib_api_client/biolib_app_api.py,sha256=vPFoONWh-i-Bg7pm_x50EQqbN9qQFLgNDTkkWKqDUTY,4248
@@ -61,12 +61,12 @@ biolib/compute_node/job_worker/executors/types.py,sha256=yP5gG39hr-DLnw9bOE--VHi
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  biolib/compute_node/job_worker/job_legacy_input_wait_timeout_thread.py,sha256=_cvEiZbOwfkv6fYmfrvdi_FVviIEYr_dSClQcOQaUWM,1198
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  biolib/compute_node/job_worker/job_max_runtime_timer_thread.py,sha256=K_xgz7IhiIjpLlXRk8sqaMyLoApcidJkgu29sJX0gb8,1174
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  biolib/compute_node/job_worker/job_storage.py,sha256=Ol43f43W6aD2EUkA6G2i9-WxdREr5JPSjo1xFylddOQ,4030
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- biolib/compute_node/job_worker/job_worker.py,sha256=98-3ksp-mfTKge9yoUw7_ab08buBnC40dVe5rT_3Ncw,27949
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+ biolib/compute_node/job_worker/job_worker.py,sha256=QwerjRPETxPa4DrI9_u2ZI89rBGtf6_w-KtIDvBI1Bw,28094
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  biolib/compute_node/job_worker/large_file_system.py,sha256=XXqRlVtYhs-Ji9zQGIk5KQPXFO_Q5jJH0nnlw4GkeMY,10461
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  biolib/compute_node/job_worker/mappings.py,sha256=Z48Kg4nbcOvsT2-9o3RRikBkqflgO4XeaWxTGz-CNvI,2499
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  biolib/compute_node/job_worker/utilization_reporter_thread.py,sha256=7tm5Yk9coqJ9VbEdnO86tSXI0iM0omwIyKENxdxiVXk,8575
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  biolib/compute_node/job_worker/utils.py,sha256=wgxcIA8yAhUPdCwyvuuJ0JmreyWmmUoBO33vWtG60xg,1282
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- biolib/compute_node/remote_host_proxy.py,sha256=9b_JILgeJ4lz0Vcv4KrHaTC7MnokShTASKQj1o9z908,14072
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+ biolib/compute_node/remote_host_proxy.py,sha256=SAp8H-mlNLF5njISF6LTXhSnO9-l5KATiABk-06lS8k,14520
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  biolib/compute_node/socker_listener_thread.py,sha256=T5_UikA3MB9bD5W_dckYLPTgixh72vKUlgbBvj9dbM0,1601
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  biolib/compute_node/socket_sender_thread.py,sha256=YgamPHeUm2GjMFGx8qk-99WlZhEs-kAb3q_2O6qByig,971
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  biolib/compute_node/utils.py,sha256=M7i_WTyxbFM3Lri9RWZ_8FeQNYrQIWpKGLfp2I55oeY,4677
@@ -101,8 +101,8 @@ biolib/utils/cache_state.py,sha256=BFrZlV4XZIueIFzAFiPidX4hmwADKY5Y5ZuqlerF5l0,3
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  biolib/utils/multipart_uploader.py,sha256=XvGP1I8tQuKhAH-QugPRoEsCi9qvbRk-DVBs5PNwwJo,8452
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  biolib/utils/seq_util.py,sha256=3BGUppEaR8asFBxktHCrIW0cMmF23b06PsbDQOoeCDQ,4879
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  biolib/utils/zip/remote_zip.py,sha256=0wErYlxir5921agfFeV1xVjf29l9VNgGQvNlWOlj2Yc,23232
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- pybiolib-1.1.1749.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
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- pybiolib-1.1.1749.dist-info/METADATA,sha256=Fbs3oCKHGSHU8_zJnwJ73bh4QSbgGJI-QosQUC2xg2k,1508
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- pybiolib-1.1.1749.dist-info/WHEEL,sha256=FMvqSimYX_P7y0a7UY-_Mc83r5zkBZsCYPm7Lr0Bsq4,88
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- pybiolib-1.1.1749.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
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- pybiolib-1.1.1749.dist-info/RECORD,,
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+ pybiolib-1.1.1755.dist-info/LICENSE,sha256=F2h7gf8i0agDIeWoBPXDMYScvQOz02pAWkKhTGOHaaw,1067
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+ pybiolib-1.1.1755.dist-info/METADATA,sha256=Hv7VQp0USJy2DMonNOGPyjc9tFVBJ54Q8Tfxiq2xKvs,1508
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+ pybiolib-1.1.1755.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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+ pybiolib-1.1.1755.dist-info/entry_points.txt,sha256=p6DyaP_2kctxegTX23WBznnrDi4mz6gx04O5uKtRDXg,42
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+ pybiolib-1.1.1755.dist-info/RECORD,,
{pybiolib-1.1.1749.dist-info → pybiolib-1.1.1755.dist-info}/WHEEL RENAMED
@@ -1,4 +1,4 @@
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  Wheel-Version: 1.0
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- Generator: poetry-core 1.8.1
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+ Generator: poetry-core 1.9.0
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  Root-Is-Purelib: true
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  Tag: py3-none-any