pyadata-cli 0.5.0__py3-none-any.whl

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Files changed (42) hide show
  1. adata/__init__.py +10 -0
  2. adata/cli.py +1139 -0
  3. adata/commands/__init__.py +8 -0
  4. adata/commands/concat.py +21 -0
  5. adata/commands/create.py +93 -0
  6. adata/commands/export.py +105 -0
  7. adata/commands/import_data.py +144 -0
  8. adata/commands/info.py +199 -0
  9. adata/commands/ls.py +114 -0
  10. adata/commands/split.py +152 -0
  11. adata/commands/subset.py +17 -0
  12. adata/core/__init__.py +1 -0
  13. adata/core/concat.py +1084 -0
  14. adata/core/info.py +276 -0
  15. adata/core/query.py +268 -0
  16. adata/core/read.py +28 -0
  17. adata/core/select.py +122 -0
  18. adata/core/subset.py +767 -0
  19. adata/elements/__init__.py +10 -0
  20. adata/elements/read.py +310 -0
  21. adata/elements/spec.py +125 -0
  22. adata/elements/strings.py +90 -0
  23. adata/elements/write.py +255 -0
  24. adata/formats/__init__.py +1 -0
  25. adata/formats/array.py +109 -0
  26. adata/formats/common.py +51 -0
  27. adata/formats/dataframe.py +234 -0
  28. adata/formats/image.py +85 -0
  29. adata/formats/json_data.py +196 -0
  30. adata/formats/sparse.py +253 -0
  31. adata/formats/validate.py +180 -0
  32. adata/info.py +3 -0
  33. adata/py.typed +0 -0
  34. adata/read.py +19 -0
  35. adata/storage/__init__.py +529 -0
  36. adata/util/__init__.py +1 -0
  37. adata/util/path.py +9 -0
  38. pyadata_cli-0.5.0.dist-info/METADATA +135 -0
  39. pyadata_cli-0.5.0.dist-info/RECORD +42 -0
  40. pyadata_cli-0.5.0.dist-info/WHEEL +4 -0
  41. pyadata_cli-0.5.0.dist-info/entry_points.txt +4 -0
  42. pyadata_cli-0.5.0.dist-info/licenses/LICENSE +21 -0
adata/__init__.py ADDED
@@ -0,0 +1,10 @@
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+ """adata-cli: streaming CLI for large AnnData .h5ad and .zarr stores."""
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+
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+ from importlib.metadata import PackageNotFoundError, version as _version
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+
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+ try:
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+ __version__ = _version("pyadata-cli")
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+ except PackageNotFoundError: # pragma: no cover - running from a source tree
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+ __version__ = "0.0.0+unknown"
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+
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+ __all__ = ["__version__"]