py2ls 0.1.4.8__py3-none-any.whl → 0.1.5.0__py3-none-any.whl

py2ls/stdshade.py

@@ -0,0 +1,173 @@
+from scipy.signal import savgol_filter
+import numpy as np
+import matplotlib.pyplot as plt
+
+def stdshade(ax=None,*args, **kwargs):
+
+    def hue2rgb(hex_colors):
+        def hex_to_rgb(hex_color):
+            """Converts a hexadecimal color code to RGB values."""
+            if hex_colors.startswith("#"):
+                hex_color = hex_color.lstrip("#")
+            return tuple(int(hex_color[i : i + 2], 16) / 255.0 for i in (0, 2, 4))
+        if isinstance(hex_colors, str):
+            return hex_to_rgb(hex_colors)
+        elif isinstance(hex_colors, (list)):
+            """Converts a list of hexadecimal color codes to a list of RGB values."""
+            rgb_values = [hex_to_rgb(hex_color) for hex_color in hex_colors]
+            return rgb_values
+    if (
+        isinstance(ax, np.ndarray)
+        and ax.ndim == 2
+        and min(ax.shape) > 1
+        and max(ax.shape) > 1
+    ):
+        y = ax
+        ax = plt.gca()
+    if ax is None:
+        ax = plt.gca()
+    alpha = 0.5
+    acolor = "k"
+    paraStdSem = "sem"
+    plotStyle = "-"
+    plotMarker = "none"
+    smth = 1
+    l_c_one = ["r", "g", "b", "m", "c", "y", "k", "w"]
+    l_style2 = ["--", "-."]
+    l_style1 = ["-", ":"]
+    l_mark = ["o", "+", "*", ".", "x", "_", "|", "s", "d", "^", "v", ">", "<", "p", "h"]
+    # Check each argument
+    for iarg in range(len(args)):
+        if (
+            isinstance(args[iarg], np.ndarray)
+            and args[iarg].ndim == 2
+            and min(args[iarg].shape) > 1
+            and max(args[iarg].shape) > 1
+        ):
+            y = args[iarg]
+        # Except y, continuous data is 'F'
+        if (isinstance(args[iarg], np.ndarray) and args[iarg].ndim == 1) or isinstance(
+            args[iarg], range
+        ):
+            x = args[iarg]
+            if isinstance(x, range):
+                x = np.arange(start=x.start, stop=x.stop, step=x.step)
+        # Only one number( 0~1), 'alpha' / color
+        if isinstance(args[iarg], (int, float)):
+            if np.size(args[iarg]) == 1 and 0 <= args[iarg] <= 1:
+                alpha = args[iarg]
+        if isinstance(args[iarg], (list, tuple)) and np.size(args[iarg]) == 3:
+            acolor = args[iarg]
+            acolor = tuple(acolor) if isinstance(acolor, list) else acolor
+        # Color / plotStyle /
+        if (
+            isinstance(args[iarg], str)
+            and len(args[iarg]) == 1
+            and args[iarg] in l_c_one
+        ):
+            acolor = args[iarg]
+        else:
+            if isinstance(args[iarg], str):
+                if args[iarg] in ["sem", "std"]:
+                    paraStdSem = args[iarg]
+                if args[iarg].startswith("#"):
+                    acolor=hue2rgb(args[iarg])
+                if str2list(args[iarg])[0] in l_c_one:
+                    if len(args[iarg]) == 3:
+                        k = [i for i in str2list(args[iarg]) if i in l_c_one]
+                        if k != []:
+                            acolor = k[0] 
+                        st = [i for i in l_style2 if i in args[iarg]]
+                        if st != []:
+                            plotStyle = st[0] 
+                    elif len(args[iarg]) == 2:
+                        k = [i for i in str2list(args[iarg]) if i in l_c_one]
+                        if k != []:
+                            acolor = k[0] 
+                        mk = [i for i in str2list(args[iarg]) if i in l_mark]
+                        if mk != []:
+                            plotMarker = mk[0] 
+                        st = [i for i in l_style1 if i in args[iarg]]
+                        if st != []:
+                            plotStyle = st[0] 
+                if len(args[iarg]) == 1:
+                    k = [i for i in str2list(args[iarg]) if i in l_c_one]
+                    if k != []:
+                        acolor = k[0] 
+                    mk = [i for i in str2list(args[iarg]) if i in l_mark]
+                    if mk != []:
+                        plotMarker = mk[0] 
+                    st = [i for i in l_style1 if i in args[iarg]]
+                    if st != []:
+                        plotStyle = st[0] 
+                if len(args[iarg]) == 2:
+                    st = [i for i in l_style2 if i in args[iarg]]
+                    if st != []:
+                        plotStyle = st[0]
+        # smth
+        if (
+            isinstance(args[iarg], (int, float))
+            and np.size(args[iarg]) == 1
+            and args[iarg] >= 1
+        ):
+            smth = args[iarg]
+
+    if "x" not in locals() or x is None:
+        x = np.arange(1, y.shape[1] + 1)
+    elif len(x) < y.shape[1]:
+        y = y[:, x]
+        nRow = y.shape[0]
+        nCol = y.shape[1]
+        print(f"y was corrected, please confirm that {nRow} row, {nCol} col")
+    else:
+        x = np.arange(1, y.shape[1] + 1)
+
+    if x.shape[0] != 1:
+        x = x.T
+    yMean = np.nanmean(y, axis=0)
+    if smth > 1:
+        yMean = savgol_filter(np.nanmean(y, axis=0), smth, 1)
+    else:
+        yMean = np.nanmean(y, axis=0)
+    if paraStdSem == "sem":
+        if smth > 1:
+            wings = savgol_filter(np.nanstd(y, axis=0) / np.sqrt(y.shape[0]), smth, 1)
+        else:
+            wings = np.nanstd(y, axis=0) / np.sqrt(y.shape[0])
+    elif paraStdSem == "std":
+        if smth > 1:
+            wings = savgol_filter(np.nanstd(y, axis=0), smth, 1)
+        else:
+            wings = np.nanstd(y, axis=0)
+
+    fill_kws = kwargs.get('fill_kws', {})
+    line_kws = kwargs.get('line_kws', {})
+    fill = ax.fill_between(x, yMean + wings, yMean - wings, color=acolor, alpha=alpha, lw=0,**fill_kws)
+    if line_kws != {} and not any(key.lower() in ['lw', 'linewidth'] for key in line_kws.keys()):
+        line = ax.plot(x, yMean, color=acolor, lw=1.5, ls=plotStyle, marker=plotMarker, **line_kws)
+    else:
+        line = ax.plot(x, yMean, color=acolor, ls=plotStyle, marker=plotMarker, **line_kws)
+    return line[0], fill
+# =============================================================================
+# # for plot figures {Qiu et al.2023}
+# =============================================================================
+# =============================================================================
+# plt.rcParams.update({'figure.max_open_warning': 0})
+# # Output matplotlib figure to SVG with text as text, not curves
+# plt.rcParams['svg.fonttype'] = 'none'
+# plt.rcParams['pdf.fonttype'] = 42
+#
+# plt.rc('text', usetex=False)
+# # plt.style.use('ggplot')
+# plt.style.use('science')
+# plt.rc('font', family='serif')
+# plt.rcParams.update({
+#     "font.family": "serif",   # specify font family here
+#     "font.serif": ["Arial"],  # specify font here
+#     "font.size": 11})
+# # plt.tight_layout()
+# =============================================================================
+# =============================================================================
+# # axis spine
+# # use it like: adjust_spines(ax, ['left', 'bottom'])
+# =============================================================================

py2ls/translator.py

@@ -1,4 +1,5 @@
 import re
+import json
 import docx # pip install python-docx
 from PyPDF2 import PdfReader
 from langdetect import detect
@@ -58,105 +59,11 @@ def get_lang_code_iso639():
     lang_code_iso639=dict([*zip(fullname,shortcut)])
     return lang_code_iso639
 
-# get_lang_code_iso639()
-
-def detect_lang(text, output='lang',verbose=False):
-    lang_code_iso639={'Abkhazian': 'ab',
-                     'Afar': 'aa',
-                     'Afrikaans': 'af',
-                     'Akan': 'ak',
-                     'Albanian': 'sq',
-                     'Amharic': 'am',
-                     'Arabic': 'ar',
-                     'Armenian': 'hy',
-                     'Assamese': 'as',
-                     #  'Avaric': 'av',
-                     'Aymara': 'ay',
-                     'Azerbaijani': 'az',
-                     'Bashkir': 'ba',
-                     'Basque': 'eu',
-                     'Belarusian': 'be',
-                     'Bislama': 'bi',
-                     'Breton': 'br',
-                     'Burmese': 'my',
-                     'Catalan, Valencian': 'ca',
-                     'Chamorro': 'ch',
-                     'Chichewa, Chewa, Nyanja': 'ny',
-                     'Chinese': 'zh',
-                     'Corsican': 'co',
-                     'Cree': 'cr',
-                     'Croatian': 'hr',
-                     'Danish': 'da',
-                     'Dutch, Flemish': 'nl',
-                     'Dzongkha': 'dz',
-                     'English': 'en',
-                     'Finnish': 'fi',
-                     'French': 'fr',
-                     'Galician': 'gl',
-                     'Georgian': 'ka',
-                     'German': 'de',
-                     'Greek, Modern (1453–)': 'el',
-                     'Gujarati': 'gu',
-                     'Hausa': 'ha',
-                     'Hebrew': 'he',
-                     'Hindi': 'hi',
-                     'Hungarian': 'hu',
-                     'Icelandic': 'is',
-                     'Italian': 'it',
-                     'Kikuyu, Gikuyu': 'ki',
-                     'Korean': 'ko',
-                     'Kurdish': 'ku',
-                     'Latin': 'la',
-                     'Limburgan, Limburger, Limburgish': 'li',
-                     'Luba-Katanga': 'lu',
-                     'Macedonian': 'mk',
-                     'Malay': 'ms',
-                     'Nauru': 'na',
-                     'North Ndebele': 'nd',
-                     'Nepali': 'ne',
-                     'Norwegian': 'no',
-                     'Norwegian Nynorsk': 'nn',
-                     'Sichuan Yi, Nuosu': 'ii',
-                     'Occitan': 'oc',
-                     'Ojibwa': 'oj',
-                     'Oriya': 'or',
-                     'Ossetian, Ossetic': 'os',
-                     'Persian': 'fa',
-                     'Punjabi, Panjabi': 'pa',
-                     'Quechua': 'qu',
-                     'Romanian, Moldavian, Moldovan': 'ro',
-                     'Russian': 'ru',
-                     'Samoan': 'sm',
-                     'Sanskrit': 'sa',
-                     'Serbian': 'sr',
-                     'Shona': 'sn',
-                     'Sinhala, Sinhalese': 'si',
-                     'Slovenian': 'sl',
-                     'Somali': 'so',
-                     'Sundanese': 'su',
-                     'Swahili': 'sw',
-                     'Swati': 'ss',
-                     'Tajik': 'tg',
-                     'Tamil': 'ta',
-                     'Telugu': 'te',
-                     'Thai': 'th',
-                     'Tibetan': 'bo',
-                     'Tigrinya': 'ti',
-                     'Tonga (Tonga Islands)': 'to',
-                     'Tsonga': 'ts',
-                     'Twi': 'tw',
-                     'Ukrainian': 'uk',
-                     'Urdu': 'ur',
-                     'Uzbek': 'uz',
-                     'Venda': 've',
-                     'Vietnamese': 'vi',
-                     'Volapük': 'vo',
-                     'Welsh': 'cy',
-                     'Wolof': 'wo',
-                     'Xhosa': 'xh',
-                     'Yiddish': 'yi',
-                     'Yoruba': 'yo',
-                     'Zulu': 'zu'}
+def detect_lang(text, output='lang',verbose=True):
+    dir_curr_script=os.path.dirname(os.path.abspath(__file__))
+    dir_lang_code=dir_curr_script+"/data/lang_code_iso639.json"
+    with open(dir_lang_code, "r") as file:
+            lang_code_iso639 = json.load(file)
     l_lang,l_code = [],[]
     [[l_lang.append(v),l_code.append(k)] for v,k in lang_code_iso639.items()]
     try:

{py2ls-0.1.4.8.dist-info → py2ls-0.1.5.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: py2ls
-Version: 0.1.4.8
+Version: 0.1.5.0
 Summary: py(thon)2(too)ls
 Author: Jianfeng
 Author-email: Jianfeng.Liu0413@gmail.com

{py2ls-0.1.4.8.dist-info → py2ls-0.1.5.0.dist-info}/RECORD

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py2ls/dbhandler.py

@@ -1,97 +0,0 @@
-import sqlite3
-import time
-
-class dbhandler:
-    def __init__(self, db_path):
-        self.db_path = db_path
-
-    def execute_query(self, query, params=None, retries=2, delay=1):
-        for attempt in range(retries):
-            try:
-                conn = sqlite3.connect(self.db_path)
-                c = conn.cursor()
-                if params:
-                    c.execute(query, params)
-                else:
-                    c.execute(query)
-                conn.commit()
-                conn.close()
-                return
-            except sqlite3.OperationalError as e:
-                if "database is locked" in str(e) and attempt < retries - 1:
-                    print(f"Database is locked, retrying in {delay} seconds...")
-                    time.sleep(delay)
-                else:
-                    print(f"Error executing query: {e}")
-                    break
-
-    def create_table(self, table_definition):
-        self.execute_query(table_definition)
-        print(f"Table created with definition: {table_definition}")
-
-    def insert_data(self, table, columns, data):
-        placeholders = ', '.join(['?' for _ in data])
-        query = f"INSERT INTO {table} ({', '.join(columns)}) VALUES ({placeholders})"
-        self.execute_query(query, data)
-        print(f"Data inserted into {table}: {data}")
-
-    def select_data(self, table, columns='*', where_clause=None, where_params=None):
-        query = f"SELECT {', '.join(columns)} FROM {table}"
-        if where_clause:
-            query += f" WHERE {where_clause}"
-        try:
-            conn = sqlite3.connect(self.db_path)
-            c = conn.cursor()
-            if where_params:
-                c.execute(query, where_params)
-            else:
-                c.execute(query)
-            rows = c.fetchall()
-            conn.close()
-            return rows
-        except sqlite3.OperationalError as e:
-            print(f"Error selecting data: {e}")
-            return None
-
-    def update_data(self, table, updates, where_clause, where_params):
-        update_clause = ', '.join([f"{col} = ?" for col in updates.keys()])
-        params = list(updates.values()) + list(where_params)
-        query = f"UPDATE {table} SET {update_clause} WHERE {where_clause}"
-        self.execute_query(query, params)
-        print(f"Data updated in {table} where {where_clause}: {updates}")
-
-    def delete_data(self, table, where_clause, where_params):
-        query = f"DELETE FROM {table} WHERE {where_clause}"
-        self.execute_query(query, where_params)
-        print(f"Data deleted from {table} where {where_clause}")
- 
-# Example usage
-if __name__ == "__main__":
-    db = dbhandler("/Users/macjianfeng/Dropbox/github/python/xample_dbhandler/data/example.db")
-    
-    # Create table
-    create_table_sql = """CREATE TABLE IF NOT EXISTS tab (
-                            row TEXT PRIMARY KEY, 
-                            content TEXT)"""
-    db.create_table(create_table_sql)
-    
-    # Insert data
-    db.insert_data("tab", ["row", "content"], ["row1", "This is a row"])
-    
-    # Select data
-    rows = db.select_data("tab")
-    print("Selected rows:", rows)
-    
-    # Update data
-    db.update_data("tab", {"content": "Updated content"}, "row = ?", ["row1"])
-    
-    # Select data again to see the update
-    rows = db.select_data("tab")
-    print("Selected rows after update:", rows)
-    
-    # Delete data
-    db.delete_data("tab", "row = ?", ["row1"])
-    
-    # Select data again to see the deletion
-    rows = db.select_data("tab")
-    print("Selected rows after deletion:", rows)