py-lfkit 0.1.4__py3-none-any.whl

lfkit/data/poggianti1997/sed.csv

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lfkit/photometry/catalog_completeness.py

@@ -0,0 +1,381 @@
+r"""Catalog completeness utilities for luminosity-function models.
+
+This module provides helpers for estimating the observed and missing galaxy
+population implied by a magnitude-limited catalog. These functions are useful
+for applications that need an out-of-catalog correction, such as galaxy-catalog
+priors for gravitational-wave cosmology.
+
+The utilities convert an apparent magnitude limit into an absolute-magnitude
+limit and call the generic LF integration helpers to return number densities
+or fractions.
+
+The core API accepts a luminosity-function callable with signature
+
+    lf(absolute_mag, z)
+
+where ``absolute_mag`` and ``z`` are NumPy arrays that can be broadcast
+together. This keeps the completeness machinery independent of any specific
+luminosity-function parameterization.
+"""
+
+from __future__ import annotations
+
+import numpy as np
+
+from lfkit.photometry.lf_integrals import (
+    integrated_number_density as _integrated_number_density,
+)
+from lfkit.photometry.magnitudes import absolute_magnitude
+from lfkit.utils.types import (
+    Cosmology,
+    FloatArray,
+    FloatInput,
+    LuminosityFunction,
+)
+from lfkit.utils.validators import validate_array, validate_magnitude_range
+
+
+__all__ = [
+    "absolute_magnitude_limit",
+    "observed_number_density",
+    "missing_number_density",
+    "catalog_completeness_fraction",
+    "out_of_catalog_fraction",
+]
+
+
+def absolute_magnitude_limit(
+    cosmo_obj: Cosmology,
+    z: FloatInput,
+    *,
+    m_lim: float,
+    h: float | None = None,
+    k_correction: FloatInput | None = None,
+    e_correction: FloatInput | None = None,
+) -> FloatArray:
+    r"""Return the absolute-magnitude limit of an apparent-magnitude catalog cut.
+
+    This converts an apparent magnitude limit into the corresponding limiting
+    absolute magnitude at each redshift,
+
+    .. math::
+
+        M_{\mathrm{lim}}(z) = m_{\mathrm{lim}} - \mu(z) - K(z) + E(z).
+
+    Args:
+        cosmo_obj: A PyCCL cosmology object.
+        z: Redshift value or array-like of redshift values.
+        m_lim: Apparent magnitude limit of the catalog.
+        h: Optional dimensionless Hubble parameter used in the
+            distance-modulus convention. If not provided, this is read from
+            ``cosmo_obj["h"]``.
+        k_correction: Optional k-correction term(s).
+        e_correction: Optional evolution-correction term(s).
+
+    Returns:
+        NumPy array of limiting absolute magnitudes.
+    """
+    z_arr = validate_array(z, name="z")
+
+    if np.any(z_arr < 0):
+        raise ValueError("Redshift z must be >= 0.")
+
+    if not np.isfinite(m_lim):
+        raise ValueError("m_lim must be finite.")
+
+    h_resolved = _resolve_h(cosmo_obj, h)
+
+    return absolute_magnitude(
+        cosmo_obj,
+        z_arr,
+        m_lim,
+        h=h_resolved,
+        k_correction=k_correction,
+        e_correction=e_correction,
+    )
+
+
+def observed_number_density(
+    cosmo_obj: Cosmology,
+    z: FloatInput,
+    lf: LuminosityFunction,
+    *,
+    m_lim: float,
+    m_bright: float,
+    m_faint: float,
+    n_m: int = 512,
+    h: float | None = None,
+    k_correction: FloatInput | None = None,
+    e_correction: FloatInput | None = None,
+) -> FloatArray:
+    r"""Return number density observable in a magnitude-limited catalog.
+
+    This integrates the luminosity function over galaxies brighter than the
+    catalog limit,
+
+    .. math::
+
+        n_{\mathrm{obs}}(z) =
+        \int_{M_{\mathrm{bright}}}^{\min[M_{\lim}(z), M_{\mathrm{faint}}]}
+        \phi(M, z) \, dM.
+
+    Args:
+        cosmo_obj: A PyCCL cosmology object.
+        z: Redshift value or array-like of redshift values.
+        lf: Luminosity-function callable with signature ``lf(M, z)``.
+        m_lim: Apparent magnitude limit of the catalog.
+        m_bright: Bright absolute-magnitude bound of the LF model.
+        m_faint: Faint absolute-magnitude bound of the LF model.
+        n_m: Number of magnitude-grid points used for the integral.
+        h: Optional dimensionless Hubble parameter used in the
+            distance-modulus convention.
+        k_correction: Optional k-correction term(s).
+        e_correction: Optional evolution-correction term(s).
+
+    Returns:
+        NumPy array of observed number densities.
+    """
+    validate_magnitude_range(m_bright=m_bright, m_faint=m_faint)
+
+    z_arr = validate_array(z, name="z")
+    m_abs_lim = absolute_magnitude_limit(
+        cosmo_obj,
+        z_arr,
+        m_lim=m_lim,
+        h=h,
+        k_correction=k_correction,
+        e_correction=e_correction,
+    )
+
+    observed_upper = np.minimum(m_abs_lim, m_faint)
+
+    return _integrated_number_density(
+        z_arr,
+        lf,
+        m_bright=m_bright,
+        m_faint=observed_upper,
+        n_m=n_m,
+    )
+
+
+def missing_number_density(
+    cosmo_obj: Cosmology,
+    z: FloatInput,
+    lf: LuminosityFunction,
+    *,
+    m_lim: float,
+    m_bright: float,
+    m_faint: float,
+    n_m: int = 512,
+    h: float | None = None,
+    k_correction: FloatInput | None = None,
+    e_correction: FloatInput | None = None,
+) -> FloatArray:
+    r"""Return number density missing from a magnitude-limited catalog.
+
+    This integrates the luminosity function over galaxies fainter than the
+    catalog limit,
+
+    .. math::
+
+        n_{\mathrm{miss}}(z) =
+        \int_{\max[M_{\lim}(z), M_{\mathrm{bright}}]}^{M_{\mathrm{faint}}}
+        \phi(M, z) \, dM.
+
+    Args:
+        cosmo_obj: A PyCCL cosmology object.
+        z: Redshift value or array-like of redshift values.
+        lf: Luminosity-function callable with signature ``lf(M, z)``.
+        m_lim: Apparent magnitude limit of the catalog.
+        m_bright: Bright absolute-magnitude bound of the LF model.
+        m_faint: Faint absolute-magnitude bound of the LF model.
+        n_m: Number of magnitude-grid points used for the integral.
+        h: Optional dimensionless Hubble parameter used in the
+            distance-modulus convention.
+        k_correction: Optional k-correction term(s).
+        e_correction: Optional evolution-correction term(s).
+
+    Returns:
+        NumPy array of missing number densities.
+    """
+    validate_magnitude_range(m_bright=m_bright, m_faint=m_faint)
+
+    z_arr = validate_array(z, name="z")
+    m_abs_lim = absolute_magnitude_limit(
+        cosmo_obj,
+        z_arr,
+        m_lim=m_lim,
+        h=h,
+        k_correction=k_correction,
+        e_correction=e_correction,
+    )
+
+    missing_lower = np.maximum(m_abs_lim, m_bright)
+
+    return _integrated_number_density(
+        z_arr,
+        lf,
+        m_bright=missing_lower,
+        m_faint=m_faint,
+        n_m=n_m,
+    )
+
+
+def catalog_completeness_fraction(
+    cosmo_obj: Cosmology,
+    z: FloatInput,
+    lf: LuminosityFunction,
+    *,
+    m_lim: float,
+    m_bright: float,
+    m_faint: float,
+    n_m: int = 512,
+    h: float | None = None,
+    k_correction: FloatInput | None = None,
+    e_correction: FloatInput | None = None,
+) -> FloatArray:
+    r"""Return the LF fraction observable in a magnitude-limited catalog.
+
+    This returns
+
+    .. math::
+
+        f_{\mathrm{obs}}(z) =
+        \frac{n_{\mathrm{obs}}(z)}
+             {n_{\mathrm{obs}}(z) + n_{\mathrm{miss}}(z)}.
+
+    Args:
+        cosmo_obj: A PyCCL cosmology object.
+        z: Redshift value or array-like of redshift values.
+        lf: Luminosity-function callable with signature ``lf(M, z)``.
+        m_lim: Apparent magnitude limit of the catalog.
+        m_bright: Bright absolute-magnitude bound of the LF model.
+        m_faint: Faint absolute-magnitude bound of the LF model.
+        n_m: Number of magnitude-grid points used for the integral.
+        h: Optional dimensionless Hubble parameter used in the
+            distance-modulus convention.
+        k_correction: Optional k-correction term(s).
+        e_correction: Optional evolution-correction term(s).
+
+    Returns:
+        NumPy array of catalog completeness fractions.
+    """
+    observed = observed_number_density(
+        cosmo_obj,
+        z,
+        lf,
+        m_lim=m_lim,
+        m_bright=m_bright,
+        m_faint=m_faint,
+        n_m=n_m,
+        h=h,
+        k_correction=k_correction,
+        e_correction=e_correction,
+    )
+
+    missing = missing_number_density(
+        cosmo_obj,
+        z,
+        lf,
+        m_lim=m_lim,
+        m_bright=m_bright,
+        m_faint=m_faint,
+        n_m=n_m,
+        h=h,
+        k_correction=k_correction,
+        e_correction=e_correction,
+    )
+
+    return _fraction(observed, observed + missing)
+
+
+def out_of_catalog_fraction(
+    cosmo_obj: Cosmology,
+    z: FloatInput,
+    lf: LuminosityFunction,
+    *,
+    m_lim: float,
+    m_bright: float,
+    m_faint: float,
+    n_m: int = 512,
+    h: float | None = None,
+    k_correction: FloatInput | None = None,
+    e_correction: FloatInput | None = None,
+) -> FloatArray:
+    r"""Return the LF fraction missing from a magnitude-limited catalog.
+
+    This returns
+
+    .. math::
+
+        f_{\mathrm{miss}}(z) = 1 - f_{\mathrm{obs}}(z).
+
+    Args:
+        cosmo_obj: A PyCCL cosmology object.
+        z: Redshift value or array-like of redshift values.
+        lf: Luminosity-function callable with signature ``lf(M, z)``.
+        m_lim: Apparent magnitude limit of the catalog.
+        m_bright: Bright absolute-magnitude bound of the LF model.
+        m_faint: Faint absolute-magnitude bound of the LF model.
+        n_m: Number of magnitude-grid points used for the integral.
+        h: Optional dimensionless Hubble parameter used in the
+            distance-modulus convention.
+        k_correction: Optional k-correction term(s).
+        e_correction: Optional evolution-correction term(s).
+
+    Returns:
+        NumPy array of out-of-catalog fractions.
+    """
+    completeness = catalog_completeness_fraction(
+        cosmo_obj,
+        z,
+        lf,
+        m_lim=m_lim,
+        m_bright=m_bright,
+        m_faint=m_faint,
+        n_m=n_m,
+        h=h,
+        k_correction=k_correction,
+        e_correction=e_correction,
+    )
+
+    return np.asarray(1.0 - completeness, dtype=float)
+
+
+def _resolve_h(
+    cosmo_obj: Cosmology,
+    h: float | None,
+) -> float:
+    """Return explicit h or read it from a PyCCL-style cosmology object."""
+    if h is not None:
+        if not np.isfinite(h):
+            raise ValueError("h must be finite.")
+        return float(h)
+
+    try:
+        h_from_cosmo = cosmo_obj["h"]
+    except (KeyError, TypeError, AttributeError) as exc:
+        raise ValueError(
+            "h was not provided and could not be read from cosmo_obj['h']."
+        ) from exc
+
+    if not np.isfinite(h_from_cosmo):
+        raise ValueError("cosmo_obj['h'] must be finite.")
+
+    return float(h_from_cosmo)
+
+
+def _fraction(
+    numerator: FloatArray,
+    denominator: FloatArray,
+) -> FloatArray:
+    r"""Return a clipped fraction with safe zero-denominator handling."""
+    with np.errstate(divide="ignore", invalid="ignore"):
+        result = np.divide(
+            numerator,
+            denominator,
+            out=np.zeros_like(numerator, dtype=float),
+            where=denominator > 0.0,
+        )
+
+    return np.asarray(np.clip(result, 0.0, 1.0), dtype=float)