plot-io 0.12.0__py3-none-win_arm64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- plot_io/__init__.py +73 -0
- plot_io/_methods.py +1691 -0
- plot_io/_native/__init__.py +199 -0
- plot_io/_native/__main__.py +197 -0
- plot_io/_native/_api.py +457 -0
- plot_io/_native/bin/windows-arm64.dll +0 -0
- plot_io/_native/kernels.py +335 -0
- plot_io/_native/manifest.json +49 -0
- plot_io/axis.py +1347 -0
- plot_io/boxes.py +1156 -0
- plot_io/canvas.py +389 -0
- plot_io/color/__init__.py +3 -0
- plot_io/color/data.py +1646 -0
- plot_io/color/maps.py +922 -0
- plot_io/color/values.py +295 -0
- plot_io/color/variants.py +1246 -0
- plot_io/colorbar.py +1426 -0
- plot_io/columns.py +614 -0
- plot_io/decorations.py +920 -0
- plot_io/defaults.py +809 -0
- plot_io/density.py +113 -0
- plot_io/ext.py +68 -0
- plot_io/facets.py +240 -0
- plot_io/figure.py +788 -0
- plot_io/formatters.py +97 -0
- plot_io/genome/__init__.py +17 -0
- plot_io/genome/adapters.py +356 -0
- plot_io/genome/combine.py +123 -0
- plot_io/genome/contacts.py +508 -0
- plot_io/genome/intervals.py +750 -0
- plot_io/genome/lanes.py +191 -0
- plot_io/genome/layout.py +184 -0
- plot_io/genome/links.py +364 -0
- plot_io/genome/pack.py +27 -0
- plot_io/genome/readers.py +145 -0
- plot_io/genome/regions.py +228 -0
- plot_io/genome/scale.py +349 -0
- plot_io/genome/series.py +344 -0
- plot_io/genome/signal.py +621 -0
- plot_io/genome/sites.py +782 -0
- plot_io/genome/sources.py +459 -0
- plot_io/genome/testing.py +161 -0
- plot_io/geometry.py +289 -0
- plot_io/groups.py +308 -0
- plot_io/guides.py +503 -0
- plot_io/helpers/__init__.py +17 -0
- plot_io/helpers/clustermap.py +202 -0
- plot_io/helpers/dendrogram.py +172 -0
- plot_io/helpers/grids.py +304 -0
- plot_io/helpers/qq.py +334 -0
- plot_io/helpers/raincloud.py +249 -0
- plot_io/helpers/tree.py +214 -0
- plot_io/helpers/volcano.py +505 -0
- plot_io/hints.py +125 -0
- plot_io/kernels.py +740 -0
- plot_io/labels.py +566 -0
- plot_io/layers/__init__.py +100 -0
- plot_io/layers/base.py +630 -0
- plot_io/layers/context.py +87 -0
- plot_io/layers/core.py +446 -0
- plot_io/layers/geoms.py +1362 -0
- plot_io/layers/grammar.py +586 -0
- plot_io/layers/paint.py +614 -0
- plot_io/layers/pipeline.py +170 -0
- plot_io/layers/positions.py +431 -0
- plot_io/layers/stats.py +1088 -0
- plot_io/layout.py +1381 -0
- plot_io/legend.py +605 -0
- plot_io/levels.py +509 -0
- plot_io/limits.py +124 -0
- plot_io/lines.py +42 -0
- plot_io/mapped.py +522 -0
- plot_io/markers.py +110 -0
- plot_io/markup.py +128 -0
- plot_io/numbers.py +354 -0
- plot_io/occupancy.py +295 -0
- plot_io/plot.py +597 -0
- plot_io/presets/__init__.py +51 -0
- plot_io/presets/_util.py +153 -0
- plot_io/presets/area.py +145 -0
- plot_io/presets/bar.py +261 -0
- plot_io/presets/box.py +400 -0
- plot_io/presets/catpoints.py +177 -0
- plot_io/presets/contour.py +353 -0
- plot_io/presets/curves.py +30 -0
- plot_io/presets/dots.py +355 -0
- plot_io/presets/ecdf.py +97 -0
- plot_io/presets/errorbar.py +106 -0
- plot_io/presets/errors.py +296 -0
- plot_io/presets/fill.py +74 -0
- plot_io/presets/heatmap.py +322 -0
- plot_io/presets/hexbin.py +198 -0
- plot_io/presets/hist.py +391 -0
- plot_io/presets/hist2d.py +87 -0
- plot_io/presets/kde.py +162 -0
- plot_io/presets/kde2d.py +147 -0
- plot_io/presets/line.py +143 -0
- plot_io/presets/pie.py +502 -0
- plot_io/presets/regression.py +115 -0
- plot_io/presets/scatter.py +194 -0
- plot_io/presets/stem.py +100 -0
- plot_io/presets/violin.py +323 -0
- plot_io/py.typed +0 -0
- plot_io/registry.py +82 -0
- plot_io/render.py +480 -0
- plot_io/rows.py +491 -0
- plot_io/scales.py +103 -0
- plot_io/seams.py +138 -0
- plot_io/settings.py +807 -0
- plot_io/shapes.py +66 -0
- plot_io/sharing.py +232 -0
- plot_io/sizemaps.py +97 -0
- plot_io/spec.py +240 -0
- plot_io/states.py +216 -0
- plot_io/styles/__init__.py +307 -0
- plot_io/styles/library.py +397 -0
- plot_io/tables.py +138 -0
- plot_io/text.py +412 -0
- plot_io/ticks.py +400 -0
- plot_io/times.py +287 -0
- plot_io/titles.py +225 -0
- plot_io/transform.py +114 -0
- plot_io/types.py +13604 -0
- plot_io/units.py +768 -0
- plot_io/validators.py +1029 -0
- plot_io/values.py +190 -0
- plot_io-0.12.0.dist-info/METADATA +215 -0
- plot_io-0.12.0.dist-info/RECORD +130 -0
- plot_io-0.12.0.dist-info/WHEEL +4 -0
- plot_io-0.12.0.dist-info/licenses/LICENSE +28 -0
plot_io/_native/_api.py
ADDED
|
@@ -0,0 +1,457 @@
|
|
|
1
|
+
"""Bindings of plot_io's C library, generated by tools/build_native.py from
|
|
2
|
+
src/plio_api.h: do not edit."""
|
|
3
|
+
|
|
4
|
+
import ctypes
|
|
5
|
+
from ctypes import POINTER, c_double, c_int32, c_int64, c_void_p
|
|
6
|
+
|
|
7
|
+
__all__ = ["ABI_VERSION", "CODES", "ERRORS", "FUNCTIONS", "STRUCTS", "SIGNATURE_TEXT"]
|
|
8
|
+
|
|
9
|
+
ABI_VERSION = 5
|
|
10
|
+
|
|
11
|
+
#: Error codes: code -> message.
|
|
12
|
+
ERRORS = {
|
|
13
|
+
-3: 'invalid argument', # PLIO_E_ARG
|
|
14
|
+
-4: 'unsupported input', # PLIO_E_UNSUPPORTED
|
|
15
|
+
-5: 'out of memory', # PLIO_E_NOMEM
|
|
16
|
+
-6: 'size limit exceeded', # PLIO_E_LIMIT
|
|
17
|
+
-7: 'parameter structure of the wrong size', # PLIO_E_STRUCT
|
|
18
|
+
}
|
|
19
|
+
|
|
20
|
+
E_ARG = -3
|
|
21
|
+
E_UNSUPPORTED = -4
|
|
22
|
+
E_NOMEM = -5
|
|
23
|
+
E_LIMIT = -6
|
|
24
|
+
E_STRUCT = -7
|
|
25
|
+
|
|
26
|
+
#: Codes of function arguments: group -> lowercase name -> code.
|
|
27
|
+
CODES = {
|
|
28
|
+
"MATH": {"floor": 0, "ceil": 1, "sqrt": 2, "exp": 3, "log": 4, "pow": 5, "sin": 6, "cos": 7},
|
|
29
|
+
"FN": {"none": 0, "log": 1, "log2": 2, "log10": 3, "sqrt": 4, "exp": 5, "symlog": 6, "logit": 7},
|
|
30
|
+
"WHISKERS": {"iqr": 0, "range": 1, "percentiles": 2},
|
|
31
|
+
"CMAP": {"linear": 0, "smooth": 1, "spline": 2},
|
|
32
|
+
"SPACE": {"srgb": 0, "oklab": 1},
|
|
33
|
+
"METRIC": {"euclidean": 0, "sqeuclidean": 1, "cityblock": 2, "chebyshev": 3, "cosine": 4, "correlation": 5, "precomputed": 6},
|
|
34
|
+
"LINKAGE": {"single": 0, "complete": 1, "average": 2, "weighted": 3, "ward": 4, "centroid": 5, "median": 6},
|
|
35
|
+
}
|
|
36
|
+
|
|
37
|
+
MATH_FLOOR = 0
|
|
38
|
+
MATH_CEIL = 1
|
|
39
|
+
MATH_SQRT = 2
|
|
40
|
+
MATH_EXP = 3
|
|
41
|
+
MATH_LOG = 4
|
|
42
|
+
MATH_POW = 5
|
|
43
|
+
MATH_SIN = 6
|
|
44
|
+
MATH_COS = 7
|
|
45
|
+
FN_NONE = 0
|
|
46
|
+
FN_LOG = 1
|
|
47
|
+
FN_LOG2 = 2
|
|
48
|
+
FN_LOG10 = 3
|
|
49
|
+
FN_SQRT = 4
|
|
50
|
+
FN_EXP = 5
|
|
51
|
+
FN_SYMLOG = 6
|
|
52
|
+
FN_LOGIT = 7
|
|
53
|
+
WHISKERS_IQR = 0
|
|
54
|
+
WHISKERS_RANGE = 1
|
|
55
|
+
WHISKERS_PERCENTILES = 2
|
|
56
|
+
CMAP_LINEAR = 0
|
|
57
|
+
CMAP_SMOOTH = 1
|
|
58
|
+
CMAP_SPLINE = 2
|
|
59
|
+
SPACE_SRGB = 0
|
|
60
|
+
SPACE_OKLAB = 1
|
|
61
|
+
METRIC_EUCLIDEAN = 0
|
|
62
|
+
METRIC_SQEUCLIDEAN = 1
|
|
63
|
+
METRIC_CITYBLOCK = 2
|
|
64
|
+
METRIC_CHEBYSHEV = 3
|
|
65
|
+
METRIC_COSINE = 4
|
|
66
|
+
METRIC_CORRELATION = 5
|
|
67
|
+
METRIC_PRECOMPUTED = 6
|
|
68
|
+
LINKAGE_SINGLE = 0
|
|
69
|
+
LINKAGE_COMPLETE = 1
|
|
70
|
+
LINKAGE_AVERAGE = 2
|
|
71
|
+
LINKAGE_WEIGHTED = 3
|
|
72
|
+
LINKAGE_WARD = 4
|
|
73
|
+
LINKAGE_CENTROID = 5
|
|
74
|
+
LINKAGE_MEDIAN = 6
|
|
75
|
+
|
|
76
|
+
|
|
77
|
+
class _Params(ctypes.Structure):
|
|
78
|
+
"""A parameter structure: ``size`` is set on creation."""
|
|
79
|
+
|
|
80
|
+
def __init__(self, *args, **kw):
|
|
81
|
+
super().__init__(ctypes.sizeof(self), *args, **kw)
|
|
82
|
+
|
|
83
|
+
|
|
84
|
+
class Ctx(_Params):
|
|
85
|
+
_fields_ = [
|
|
86
|
+
("size", c_int64),
|
|
87
|
+
("malloc", c_void_p),
|
|
88
|
+
("realloc", c_void_p),
|
|
89
|
+
("free", c_void_p),
|
|
90
|
+
("message", c_void_p),
|
|
91
|
+
("message_size", c_int64),
|
|
92
|
+
]
|
|
93
|
+
|
|
94
|
+
|
|
95
|
+
class Scale(_Params):
|
|
96
|
+
_fields_ = [
|
|
97
|
+
("size", c_int64),
|
|
98
|
+
("function", c_int32),
|
|
99
|
+
("has_nan", c_int32),
|
|
100
|
+
("has_below", c_int32),
|
|
101
|
+
("has_above", c_int32),
|
|
102
|
+
("scale", c_double),
|
|
103
|
+
("offset", c_double),
|
|
104
|
+
("linthresh", c_double),
|
|
105
|
+
("low", c_double),
|
|
106
|
+
("high", c_double),
|
|
107
|
+
("under", c_double),
|
|
108
|
+
("over", c_double),
|
|
109
|
+
("nan_value", c_double),
|
|
110
|
+
("below", c_double),
|
|
111
|
+
("above", c_double),
|
|
112
|
+
]
|
|
113
|
+
|
|
114
|
+
|
|
115
|
+
class Whiskers(_Params):
|
|
116
|
+
_fields_ = [
|
|
117
|
+
("size", c_int64),
|
|
118
|
+
("mode", c_int32),
|
|
119
|
+
("reserved", c_int32),
|
|
120
|
+
("a", c_double),
|
|
121
|
+
("b", c_double),
|
|
122
|
+
]
|
|
123
|
+
|
|
124
|
+
|
|
125
|
+
class Summary(_Params):
|
|
126
|
+
_fields_ = [
|
|
127
|
+
("size", c_int64),
|
|
128
|
+
("rows", c_int64),
|
|
129
|
+
("cols", c_int64),
|
|
130
|
+
("groups", c_int64),
|
|
131
|
+
("threshold", c_double),
|
|
132
|
+
("group", c_void_p),
|
|
133
|
+
]
|
|
134
|
+
|
|
135
|
+
|
|
136
|
+
class Stops(_Params):
|
|
137
|
+
_fields_ = [
|
|
138
|
+
("size", c_int64),
|
|
139
|
+
("m", c_int32),
|
|
140
|
+
("mode", c_int32),
|
|
141
|
+
("space", c_int32),
|
|
142
|
+
("reserved", c_int32),
|
|
143
|
+
("pos", c_void_p),
|
|
144
|
+
("rgba", c_void_p),
|
|
145
|
+
]
|
|
146
|
+
|
|
147
|
+
|
|
148
|
+
class Lookup(_Params):
|
|
149
|
+
_fields_ = [
|
|
150
|
+
("size", c_int64),
|
|
151
|
+
("m", c_int32),
|
|
152
|
+
("flags", c_int32),
|
|
153
|
+
("table", c_void_p),
|
|
154
|
+
("steps", c_void_p),
|
|
155
|
+
("under", c_double * 4),
|
|
156
|
+
("over", c_double * 4),
|
|
157
|
+
("bad", c_double * 4),
|
|
158
|
+
]
|
|
159
|
+
|
|
160
|
+
|
|
161
|
+
class CellMap(_Params):
|
|
162
|
+
_fields_ = [
|
|
163
|
+
("size", c_int64),
|
|
164
|
+
("lo", c_double),
|
|
165
|
+
("hi", c_double),
|
|
166
|
+
("levels", c_int32),
|
|
167
|
+
("split", c_int32),
|
|
168
|
+
]
|
|
169
|
+
|
|
170
|
+
|
|
171
|
+
class Points(_Params):
|
|
172
|
+
_fields_ = [
|
|
173
|
+
("size", c_int64),
|
|
174
|
+
("n", c_int64),
|
|
175
|
+
("x", c_void_p),
|
|
176
|
+
("y", c_void_p),
|
|
177
|
+
("w", c_void_p),
|
|
178
|
+
]
|
|
179
|
+
|
|
180
|
+
|
|
181
|
+
class Hexgrid(_Params):
|
|
182
|
+
_fields_ = [
|
|
183
|
+
("size", c_int64),
|
|
184
|
+
("nx", c_int32),
|
|
185
|
+
("ny", c_int32),
|
|
186
|
+
("x0", c_double),
|
|
187
|
+
("y0", c_double),
|
|
188
|
+
("dx", c_double),
|
|
189
|
+
("dy", c_double),
|
|
190
|
+
]
|
|
191
|
+
|
|
192
|
+
|
|
193
|
+
class KdeGrid(_Params):
|
|
194
|
+
_fields_ = [
|
|
195
|
+
("size", c_int64),
|
|
196
|
+
("m", c_int32),
|
|
197
|
+
("cumulative", c_int32),
|
|
198
|
+
("lo", c_double),
|
|
199
|
+
("hi", c_double),
|
|
200
|
+
("bw", c_double),
|
|
201
|
+
]
|
|
202
|
+
|
|
203
|
+
|
|
204
|
+
class Kernel2d(_Params):
|
|
205
|
+
_fields_ = [
|
|
206
|
+
("size", c_int64),
|
|
207
|
+
("h11", c_double),
|
|
208
|
+
("h12", c_double),
|
|
209
|
+
("h22", c_double),
|
|
210
|
+
]
|
|
211
|
+
|
|
212
|
+
|
|
213
|
+
class Blur(_Params):
|
|
214
|
+
_fields_ = [
|
|
215
|
+
("size", c_int64),
|
|
216
|
+
("rows", c_int64),
|
|
217
|
+
("cols", c_int64),
|
|
218
|
+
("L", c_int64),
|
|
219
|
+
("delta", c_double),
|
|
220
|
+
("var", c_double),
|
|
221
|
+
]
|
|
222
|
+
|
|
223
|
+
|
|
224
|
+
class Grid(_Params):
|
|
225
|
+
_fields_ = [
|
|
226
|
+
("size", c_int64),
|
|
227
|
+
("w", c_int32),
|
|
228
|
+
("h", c_int32),
|
|
229
|
+
("g", c_void_p),
|
|
230
|
+
("xs", c_void_p),
|
|
231
|
+
("ys", c_void_p),
|
|
232
|
+
]
|
|
233
|
+
|
|
234
|
+
|
|
235
|
+
class LowessArgs(_Params):
|
|
236
|
+
_fields_ = [
|
|
237
|
+
("size", c_int64),
|
|
238
|
+
("iterations", c_int32),
|
|
239
|
+
("reserved", c_int32),
|
|
240
|
+
("frac", c_double),
|
|
241
|
+
("delta", c_double),
|
|
242
|
+
]
|
|
243
|
+
|
|
244
|
+
|
|
245
|
+
class LinkageArgs(_Params):
|
|
246
|
+
_fields_ = [
|
|
247
|
+
("size", c_int64),
|
|
248
|
+
("n", c_int64),
|
|
249
|
+
("d", c_int64),
|
|
250
|
+
("method", c_int32),
|
|
251
|
+
("metric", c_int32),
|
|
252
|
+
("data", c_void_p),
|
|
253
|
+
]
|
|
254
|
+
|
|
255
|
+
|
|
256
|
+
#: Structure name in C -> ctypes class.
|
|
257
|
+
STRUCTS = {
|
|
258
|
+
"plio_ctx": Ctx,
|
|
259
|
+
"plio_scale": Scale,
|
|
260
|
+
"plio_whiskers": Whiskers,
|
|
261
|
+
"plio_summary": Summary,
|
|
262
|
+
"plio_stops": Stops,
|
|
263
|
+
"plio_lookup": Lookup,
|
|
264
|
+
"plio_cell_map": CellMap,
|
|
265
|
+
"plio_points": Points,
|
|
266
|
+
"plio_hexgrid": Hexgrid,
|
|
267
|
+
"plio_kde_grid": KdeGrid,
|
|
268
|
+
"plio_kernel2d": Kernel2d,
|
|
269
|
+
"plio_blur": Blur,
|
|
270
|
+
"plio_grid": Grid,
|
|
271
|
+
"plio_lowess_args": LowessArgs,
|
|
272
|
+
"plio_linkage_args": LinkageArgs,
|
|
273
|
+
}
|
|
274
|
+
|
|
275
|
+
#: Exported functions: name -> (restype, argtypes).
|
|
276
|
+
FUNCTIONS = {
|
|
277
|
+
"plio_abi_version": (c_int32, []),
|
|
278
|
+
"plio_free": (None, [POINTER(Ctx), c_void_p]),
|
|
279
|
+
"plio_signatures": (c_int64, [POINTER(Ctx), POINTER(c_void_p), POINTER(c_void_p)]),
|
|
280
|
+
"plio_math_eval": (c_int64, [POINTER(Ctx), c_int32, c_void_p, c_void_p, c_void_p, c_int64]),
|
|
281
|
+
"plio_scaled": (c_int64, [POINTER(Ctx), POINTER(Scale), c_void_p, c_int64, c_void_p]),
|
|
282
|
+
"plio_extent": (c_int64, [POINTER(Ctx), c_void_p, c_int64, c_int32, c_void_p]),
|
|
283
|
+
"plio_quantiles": (c_int64, [POINTER(Ctx), c_void_p, c_int64, c_void_p, c_int32, c_void_p]),
|
|
284
|
+
"plio_box_stats": (c_int64, [POINTER(Ctx), POINTER(Whiskers), c_void_p, c_int64, c_void_p, POINTER(c_void_p), c_void_p]),
|
|
285
|
+
"plio_argsort": (c_int64, [POINTER(Ctx), c_void_p, c_int64, c_int32, c_void_p]),
|
|
286
|
+
"plio_take": (c_int64, [POINTER(Ctx), c_void_p, c_int64, c_int32, c_void_p, c_int64, c_void_p]),
|
|
287
|
+
"plio_group_summary": (c_int64, [POINTER(Ctx), POINTER(Summary), c_void_p, c_void_p]),
|
|
288
|
+
"plio_colormap_eval": (c_int64, [POINTER(Ctx), POINTER(Stops), c_void_p, c_int64, c_void_p]),
|
|
289
|
+
"plio_colors_at": (c_int64, [POINTER(Ctx), POINTER(Lookup), c_void_p, c_int64, c_void_p]),
|
|
290
|
+
"plio_cells": (c_int64, [POINTER(Ctx), POINTER(CellMap), c_void_p, c_int64, c_void_p]),
|
|
291
|
+
"plio_histogram": (c_int64, [POINTER(Ctx), c_void_p, c_int64, c_void_p, c_void_p, c_int32, c_void_p]),
|
|
292
|
+
"plio_histogram2d": (c_int64, [POINTER(Ctx), POINTER(Points), c_void_p, c_int32, c_void_p, c_int32, c_void_p]),
|
|
293
|
+
"plio_hexbin": (c_int64, [POINTER(Ctx), POINTER(Points), POINTER(Hexgrid), c_void_p]),
|
|
294
|
+
"plio_moments": (c_int64, [POINTER(Ctx), c_void_p, c_void_p, c_int64, c_void_p]),
|
|
295
|
+
"plio_moments2": (c_int64, [POINTER(Ctx), POINTER(Points), c_void_p]),
|
|
296
|
+
"plio_ecdf": (c_int64, [POINTER(Ctx), c_void_p, c_void_p, c_int64, c_void_p, c_void_p]),
|
|
297
|
+
"plio_kde": (c_int64, [POINTER(Ctx), POINTER(KdeGrid), c_void_p, c_void_p, c_int64, c_void_p]),
|
|
298
|
+
"plio_kde2d_exact": (c_int64, [POINTER(Ctx), POINTER(Points), POINTER(Kernel2d), c_void_p, c_void_p, c_int64, c_void_p]),
|
|
299
|
+
"plio_kde2d_setup": (c_int64, [POINTER(Ctx), POINTER(Points), POINTER(Kernel2d), c_int32, c_void_p]),
|
|
300
|
+
"plio_kde2d_bin": (c_int64, [POINTER(Ctx), POINTER(Points), c_void_p, c_void_p]),
|
|
301
|
+
"plio_kde2d_blur": (c_int64, [POINTER(Ctx), POINTER(Blur), c_void_p, c_void_p, c_int64, c_int64]),
|
|
302
|
+
"plio_transpose": (c_int64, [POINTER(Ctx), c_void_p, c_void_p, c_int64, c_int64]),
|
|
303
|
+
"plio_kde2d_sample": (c_int64, [POINTER(Ctx), c_void_p, c_void_p, c_void_p, c_void_p, c_int64, c_void_p]),
|
|
304
|
+
"plio_contour_lines": (c_int64, [POINTER(Ctx), POINTER(Grid), c_double, POINTER(c_void_p), POINTER(c_void_p), POINTER(c_void_p)]),
|
|
305
|
+
"plio_contour_bands": (c_int64, [POINTER(Ctx), POINTER(Grid), c_double, c_double, POINTER(c_void_p), POINTER(c_void_p)]),
|
|
306
|
+
"plio_lowess": (c_int64, [POINTER(Ctx), POINTER(LowessArgs), c_void_p, c_void_p, c_int64, c_void_p]),
|
|
307
|
+
"plio_swarm": (c_int64, [POINTER(Ctx), c_void_p, c_void_p, c_int32, c_int64, c_double, c_void_p]),
|
|
308
|
+
"plio_linkage": (c_int64, [POINTER(Ctx), POINTER(LinkageArgs), POINTER(c_void_p)]),
|
|
309
|
+
}
|
|
310
|
+
|
|
311
|
+
#: What plio_signatures() must report, line by line.
|
|
312
|
+
SIGNATURE_TEXT = (
|
|
313
|
+
"f plio_abi_version i \n"
|
|
314
|
+
"f plio_free v Splio_ctx,p\n"
|
|
315
|
+
"f plio_signatures q Splio_ctx,P,P\n"
|
|
316
|
+
"f plio_math_eval q Splio_ctx,i,p,p,p,q\n"
|
|
317
|
+
"f plio_scaled q Splio_ctx,Splio_scale,p,q,p\n"
|
|
318
|
+
"f plio_extent q Splio_ctx,p,q,i,p\n"
|
|
319
|
+
"f plio_quantiles q Splio_ctx,p,q,p,i,p\n"
|
|
320
|
+
"f plio_box_stats q Splio_ctx,Splio_whiskers,p,q,p,P,p\n"
|
|
321
|
+
"f plio_argsort q Splio_ctx,p,q,i,p\n"
|
|
322
|
+
"f plio_take q Splio_ctx,p,q,i,p,q,p\n"
|
|
323
|
+
"f plio_group_summary q Splio_ctx,Splio_summary,p,p\n"
|
|
324
|
+
"f plio_colormap_eval q Splio_ctx,Splio_stops,p,q,p\n"
|
|
325
|
+
"f plio_colors_at q Splio_ctx,Splio_lookup,p,q,p\n"
|
|
326
|
+
"f plio_cells q Splio_ctx,Splio_cell_map,p,q,p\n"
|
|
327
|
+
"f plio_histogram q Splio_ctx,p,q,p,p,i,p\n"
|
|
328
|
+
"f plio_histogram2d q Splio_ctx,Splio_points,p,i,p,i,p\n"
|
|
329
|
+
"f plio_hexbin q Splio_ctx,Splio_points,Splio_hexgrid,p\n"
|
|
330
|
+
"f plio_moments q Splio_ctx,p,p,q,p\n"
|
|
331
|
+
"f plio_moments2 q Splio_ctx,Splio_points,p\n"
|
|
332
|
+
"f plio_ecdf q Splio_ctx,p,p,q,p,p\n"
|
|
333
|
+
"f plio_kde q Splio_ctx,Splio_kde_grid,p,p,q,p\n"
|
|
334
|
+
"f plio_kde2d_exact q Splio_ctx,Splio_points,Splio_kernel2d,p,p,q,p\n"
|
|
335
|
+
"f plio_kde2d_setup q Splio_ctx,Splio_points,Splio_kernel2d,i,p\n"
|
|
336
|
+
"f plio_kde2d_bin q Splio_ctx,Splio_points,p,p\n"
|
|
337
|
+
"f plio_kde2d_blur q Splio_ctx,Splio_blur,p,p,q,q\n"
|
|
338
|
+
"f plio_transpose q Splio_ctx,p,p,q,q\n"
|
|
339
|
+
"f plio_kde2d_sample q Splio_ctx,p,p,p,p,q,p\n"
|
|
340
|
+
"f plio_contour_lines q Splio_ctx,Splio_grid,d,P,P,P\n"
|
|
341
|
+
"f plio_contour_bands q Splio_ctx,Splio_grid,d,d,P,P\n"
|
|
342
|
+
"f plio_lowess q Splio_ctx,Splio_lowess_args,p,p,q,p\n"
|
|
343
|
+
"f plio_swarm q Splio_ctx,p,p,i,q,d,p\n"
|
|
344
|
+
"f plio_linkage q Splio_ctx,Splio_linkage_args,P\n"
|
|
345
|
+
"s plio_ctx\n"
|
|
346
|
+
"m plio_ctx.size q\n"
|
|
347
|
+
"m plio_ctx.malloc p\n"
|
|
348
|
+
"m plio_ctx.realloc p\n"
|
|
349
|
+
"m plio_ctx.free p\n"
|
|
350
|
+
"m plio_ctx.message p\n"
|
|
351
|
+
"m plio_ctx.message_size q\n"
|
|
352
|
+
"s plio_scale\n"
|
|
353
|
+
"m plio_scale.size q\n"
|
|
354
|
+
"m plio_scale.function i\n"
|
|
355
|
+
"m plio_scale.has_nan i\n"
|
|
356
|
+
"m plio_scale.has_below i\n"
|
|
357
|
+
"m plio_scale.has_above i\n"
|
|
358
|
+
"m plio_scale.scale d\n"
|
|
359
|
+
"m plio_scale.offset d\n"
|
|
360
|
+
"m plio_scale.linthresh d\n"
|
|
361
|
+
"m plio_scale.low d\n"
|
|
362
|
+
"m plio_scale.high d\n"
|
|
363
|
+
"m plio_scale.under d\n"
|
|
364
|
+
"m plio_scale.over d\n"
|
|
365
|
+
"m plio_scale.nan_value d\n"
|
|
366
|
+
"m plio_scale.below d\n"
|
|
367
|
+
"m plio_scale.above d\n"
|
|
368
|
+
"s plio_whiskers\n"
|
|
369
|
+
"m plio_whiskers.size q\n"
|
|
370
|
+
"m plio_whiskers.mode i\n"
|
|
371
|
+
"m plio_whiskers.reserved i\n"
|
|
372
|
+
"m plio_whiskers.a d\n"
|
|
373
|
+
"m plio_whiskers.b d\n"
|
|
374
|
+
"s plio_summary\n"
|
|
375
|
+
"m plio_summary.size q\n"
|
|
376
|
+
"m plio_summary.rows q\n"
|
|
377
|
+
"m plio_summary.cols q\n"
|
|
378
|
+
"m plio_summary.groups q\n"
|
|
379
|
+
"m plio_summary.threshold d\n"
|
|
380
|
+
"m plio_summary.group p\n"
|
|
381
|
+
"s plio_stops\n"
|
|
382
|
+
"m plio_stops.size q\n"
|
|
383
|
+
"m plio_stops.m i\n"
|
|
384
|
+
"m plio_stops.mode i\n"
|
|
385
|
+
"m plio_stops.space i\n"
|
|
386
|
+
"m plio_stops.reserved i\n"
|
|
387
|
+
"m plio_stops.pos p\n"
|
|
388
|
+
"m plio_stops.rgba p\n"
|
|
389
|
+
"s plio_lookup\n"
|
|
390
|
+
"m plio_lookup.size q\n"
|
|
391
|
+
"m plio_lookup.m i\n"
|
|
392
|
+
"m plio_lookup.flags i\n"
|
|
393
|
+
"m plio_lookup.table p\n"
|
|
394
|
+
"m plio_lookup.steps p\n"
|
|
395
|
+
"m plio_lookup.under d[4]\n"
|
|
396
|
+
"m plio_lookup.over d[4]\n"
|
|
397
|
+
"m plio_lookup.bad d[4]\n"
|
|
398
|
+
"s plio_cell_map\n"
|
|
399
|
+
"m plio_cell_map.size q\n"
|
|
400
|
+
"m plio_cell_map.lo d\n"
|
|
401
|
+
"m plio_cell_map.hi d\n"
|
|
402
|
+
"m plio_cell_map.levels i\n"
|
|
403
|
+
"m plio_cell_map.split i\n"
|
|
404
|
+
"s plio_points\n"
|
|
405
|
+
"m plio_points.size q\n"
|
|
406
|
+
"m plio_points.n q\n"
|
|
407
|
+
"m plio_points.x p\n"
|
|
408
|
+
"m plio_points.y p\n"
|
|
409
|
+
"m plio_points.w p\n"
|
|
410
|
+
"s plio_hexgrid\n"
|
|
411
|
+
"m plio_hexgrid.size q\n"
|
|
412
|
+
"m plio_hexgrid.nx i\n"
|
|
413
|
+
"m plio_hexgrid.ny i\n"
|
|
414
|
+
"m plio_hexgrid.x0 d\n"
|
|
415
|
+
"m plio_hexgrid.y0 d\n"
|
|
416
|
+
"m plio_hexgrid.dx d\n"
|
|
417
|
+
"m plio_hexgrid.dy d\n"
|
|
418
|
+
"s plio_kde_grid\n"
|
|
419
|
+
"m plio_kde_grid.size q\n"
|
|
420
|
+
"m plio_kde_grid.m i\n"
|
|
421
|
+
"m plio_kde_grid.cumulative i\n"
|
|
422
|
+
"m plio_kde_grid.lo d\n"
|
|
423
|
+
"m plio_kde_grid.hi d\n"
|
|
424
|
+
"m plio_kde_grid.bw d\n"
|
|
425
|
+
"s plio_kernel2d\n"
|
|
426
|
+
"m plio_kernel2d.size q\n"
|
|
427
|
+
"m plio_kernel2d.h11 d\n"
|
|
428
|
+
"m plio_kernel2d.h12 d\n"
|
|
429
|
+
"m plio_kernel2d.h22 d\n"
|
|
430
|
+
"s plio_blur\n"
|
|
431
|
+
"m plio_blur.size q\n"
|
|
432
|
+
"m plio_blur.rows q\n"
|
|
433
|
+
"m plio_blur.cols q\n"
|
|
434
|
+
"m plio_blur.L q\n"
|
|
435
|
+
"m plio_blur.delta d\n"
|
|
436
|
+
"m plio_blur.var d\n"
|
|
437
|
+
"s plio_grid\n"
|
|
438
|
+
"m plio_grid.size q\n"
|
|
439
|
+
"m plio_grid.w i\n"
|
|
440
|
+
"m plio_grid.h i\n"
|
|
441
|
+
"m plio_grid.g p\n"
|
|
442
|
+
"m plio_grid.xs p\n"
|
|
443
|
+
"m plio_grid.ys p\n"
|
|
444
|
+
"s plio_lowess_args\n"
|
|
445
|
+
"m plio_lowess_args.size q\n"
|
|
446
|
+
"m plio_lowess_args.iterations i\n"
|
|
447
|
+
"m plio_lowess_args.reserved i\n"
|
|
448
|
+
"m plio_lowess_args.frac d\n"
|
|
449
|
+
"m plio_lowess_args.delta d\n"
|
|
450
|
+
"s plio_linkage_args\n"
|
|
451
|
+
"m plio_linkage_args.size q\n"
|
|
452
|
+
"m plio_linkage_args.n q\n"
|
|
453
|
+
"m plio_linkage_args.d q\n"
|
|
454
|
+
"m plio_linkage_args.method i\n"
|
|
455
|
+
"m plio_linkage_args.metric i\n"
|
|
456
|
+
"m plio_linkage_args.data p\n"
|
|
457
|
+
)
|
|
Binary file
|