pigeon-tem-comms 0.1.0__py3-none-any.whl → 0.2.0__py3-none-any.whl

TEM_comms/__init__.py

@@ -3,11 +3,12 @@ from . import camera
 from . import scope
 from . import stage
 from . import tile
+from . import ui
 
 import importlib.metadata
 
 
-__version__ = importlib.metadata.version("TEM_comms")
+__version__ = importlib.metadata.version("pigeon-tem-comms")
 
 topics = {
     "buffer.status": buffer.Status,
@@ -31,7 +32,10 @@ topics = {
     "tile.statistics.histogram": tile.statistics.Histogram,
     "tile.statistics.min_max_mean": tile.statistics.MinMaxMean,
     "tile.transform": tile.Transform,
+    "ui.edit": ui.Edit,
+    "ui.run": ui.Run,
+    "ui.setup": ui.Setup,
 }
 
 
-msgs = (topics, __version__)
+msgs = (topics, __version__)

TEM_comms/buffer.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 
 
 class Status(BaseMessage):

TEM_comms/camera.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 
 class Command(BaseMessage):
     tile_id: str

TEM_comms/scope.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 from typing import Literal
 from pydantic import model_validator
 

TEM_comms/stage/aperture.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 
 class Command(BaseMessage):
     aperture_id: int | None = None

TEM_comms/stage/motion.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 
 class Command(BaseMessage):
     x: int | None = None

TEM_comms/stage/rotation.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 
 class Command(BaseMessage):
     angle_x: float | None = None

TEM_comms/tile/__init__.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 from . import statistics
 
 

TEM_comms/tile/statistics.py

@@ -1,4 +1,4 @@
-from emarfarap import BaseMessage
+from pigeon import BaseMessage
 
 class Focus(BaseMessage):
     tile_id: str

TEM_comms/ui.py

@@ -0,0 +1,42 @@
+from pigeon import BaseMessage
+from typing import Optional
+from pydantic import model_validator
+
+
+class Edit(BaseMessage):
+    roi_id: str
+    roi_pos_x: int
+    roi_pox_y: int
+    roi_width: int
+    roi_height: int
+    roi_angle: float
+
+
+class Run(BaseMessage):
+    session_id: Optional[str] = None
+    grid_first: Optional[int] = None
+    grid_last: Optional[int] = None
+    montage: bool = False
+    abort_now: bool = False
+    abort_at_end: bool = False
+    resume: bool = False
+
+    @model_validator(mode="after")
+    def check_grid(self):
+        assert self.montage != (self.grid_first is None)
+        assert self.montage != (self.grid_last is None)
+        return self
+
+    @model_validator(mode="after")
+    def check_session(self):
+        assert self.montage != (self.session_id is None)
+        return self
+
+
+class Setup(BaseMessage):
+    conch_owner: Optional[str] = None
+    auto_focus: bool = False
+    auto_exposure: bool = False
+    lens_correction: bool = False
+    acquire_brightfield: bool = False
+    acquire_darkfield: bool = False

{pigeon_tem_comms-0.1.0.dist-info → pigeon_tem_comms-0.2.0.dist-info}/METADATA

@@ -1,8 +1,18 @@
 Metadata-Version: 2.1
 Name: pigeon-tem-comms
-Version: 0.1.0
+Version: 0.2.0
 Summary: Pigeon messages for the next generation TEM imaging system.
 Author-email: Cameron Devine <cameron.devine@alleninstitute.org>
+License: BSD 3 Clause
+Project-URL: Homepage, https://github.com/AllenInstitute/TEM_comms
+Project-URL: Documentation, https://alleninstitute.github.io/TEM_architecture/topics.html
+Project-URL: Repository, https://github.com/AllenInstitute/TEM_comms
+Project-URL: Issues, https://github.com/AllenInstitute/TEM_comms/issues
+Classifier: Intended Audience :: Developers
+Classifier: License :: OSI Approved :: BSD License
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
 Requires-Python: >=3.10
 Description-Content-Type: text/markdown
 License-File: LICENSE

pigeon_tem_comms-0.2.0.dist-info/RECORD

@@ -0,0 +1,17 @@
+TEM_comms/__init__.py,sha256=0FngFKym-Yl33wkqr68k6YglJCbVs1fV63uHFTmzJwk,1229
+TEM_comms/buffer.py,sha256=Jr6fUIbUPreQSSGKWR7jkA1McyZZv3lVE8uQSER8VL4,123
+TEM_comms/camera.py,sha256=uBp9N00k4x_eYC_W8zUrTjFrmCpb6Tu2GQOG0WIGKwc,440
+TEM_comms/scope.py,sha256=cj8S0BqR7RozFNh2TsiT-DnuRKCIdMKol5PdIxG65JU,501
+TEM_comms/ui.py,sha256=8a3GxCjw7E52WcAgDZLlQ7S4L92w5GuhJK2V_tEdSSA,1055
+TEM_comms/stage/__init__.py,sha256=xeB18s-MGkc83BsfWkUc0W3YwxoHVK-QfLAPfRelcFQ,66
+TEM_comms/stage/aperture.py,sha256=hnd9HB6jYywHRQ1fB7suKEUvXZDT2VkE5cFJ3zKctPg,217
+TEM_comms/stage/motion.py,sha256=NQPufhxRKB3ySEyPksDFi6srBlBGKxaqF5k2YAAfa9s,227
+TEM_comms/stage/rotation.py,sha256=3khQqRCBDXNDQ5uArzhQ4kL0JP58wVMEbW3rG8hrZ_s,259
+TEM_comms/tile/__init__.py,sha256=kK9thh69UavYZ3toRzc_BLwjR3_Yif1tTdRAGLncrzY,458
+TEM_comms/tile/statistics.py,sha256=sQHeXtO3UB9k6lKtDEeO3e142aaAKelp-A8A_Bf5XJ8,242
+pigeon_tem_comms-0.2.0.dist-info/LICENSE,sha256=tZfQIUX7uNGacTb751ZWInVenJl6OwYQihcGbYrKSts,1463
+pigeon_tem_comms-0.2.0.dist-info/METADATA,sha256=Xz4Dnz98Mzl0R-r-pjPH81vCIx-QKM0V2SsSgSB_s10,1553
+pigeon_tem_comms-0.2.0.dist-info/WHEEL,sha256=mguMlWGMX-VHnMpKOjjQidIo1ssRlCFu4a4mBpz1s2M,91
+pigeon_tem_comms-0.2.0.dist-info/entry_points.txt,sha256=KFi0hPNwGY3gEmJF_8_smglVpfbU24lcCy0t_TJPgtg,36
+pigeon_tem_comms-0.2.0.dist-info/top_level.txt,sha256=3_1RcQ7xvS2dJEYnPIigo9snoKcSXSNJzPqunY0qydI,10
+pigeon_tem_comms-0.2.0.dist-info/RECORD,,

{pigeon_tem_comms-0.1.0.dist-info → pigeon_tem_comms-0.2.0.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.43.0)
+Generator: setuptools (70.1.1)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

pigeon_tem_comms-0.1.0.dist-info/RECORD

@@ -1,16 +0,0 @@
-TEM_comms/__init__.py,sha256=J5MBiI6dQibGSzEfDI689JU3pdoqugBNCx24WO4NTNY,1132
-TEM_comms/buffer.py,sha256=H3RxH9QkR4N8uKOqDJeH-H3d73fw8gGiga7bmN_gXX0,126
-TEM_comms/camera.py,sha256=q1VUhUcgliA7AFiGmC6hRF9KuqOYmd44P5UsOTGMfPE,443
-TEM_comms/scope.py,sha256=TLUVd2uxVin7kY5eAeL8ZyJSkJr4A3OULY83xal3oS0,504
-TEM_comms/stage/__init__.py,sha256=xeB18s-MGkc83BsfWkUc0W3YwxoHVK-QfLAPfRelcFQ,66
-TEM_comms/stage/aperture.py,sha256=s6MxwgsX0aVCUIT3mHHDZXtmSg-XNE3dqx3EWa-3Kds,220
-TEM_comms/stage/motion.py,sha256=6ZPHJu_WGu2TYLYbp_FmIjsXGDqqTvUBxNCVKBgw9Ns,230
-TEM_comms/stage/rotation.py,sha256=9QpNtyD2iBW51mL0WJ_2nIcso4i51_FMJQEjAhI_vyU,262
-TEM_comms/tile/__init__.py,sha256=CIwc7YH5FenTfNglBVUY5T7l3zZMPRh7RoM1vcGUUFg,461
-TEM_comms/tile/statistics.py,sha256=gbsA43iWf2Bs7rlFZR8m0m0cQysxSeu0He9S6x7EH6Y,245
-pigeon_tem_comms-0.1.0.dist-info/LICENSE,sha256=tZfQIUX7uNGacTb751ZWInVenJl6OwYQihcGbYrKSts,1463
-pigeon_tem_comms-0.1.0.dist-info/METADATA,sha256=d3vooVtjyuJfhhseEotveYay9yv5MP7cPKf1d4hb9UQ,985
-pigeon_tem_comms-0.1.0.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
-pigeon_tem_comms-0.1.0.dist-info/entry_points.txt,sha256=KFi0hPNwGY3gEmJF_8_smglVpfbU24lcCy0t_TJPgtg,36
-pigeon_tem_comms-0.1.0.dist-info/top_level.txt,sha256=3_1RcQ7xvS2dJEYnPIigo9snoKcSXSNJzPqunY0qydI,10
-pigeon_tem_comms-0.1.0.dist-info/RECORD,,