phylogenie 2.1.6__py3-none-any.whl → 2.1.7__py3-none-any.whl

phylogenie/tree.py

@@ -36,6 +36,15 @@ class Tree:
         if node is not None:
             node._children.append(self)
 
+    def inorder_traversal(self) -> Iterator["Tree"]:
+        if self.children and len(self.children) != 2:
+            raise ValueError("Inorder traversal is only defined for binary trees.")
+        if self.children:
+            yield from self.children[0].inorder_traversal()
+        yield self
+        if self.children:
+            yield from self.children[1].inorder_traversal()
+
     def preorder_traversal(self) -> Iterator["Tree"]:
         yield self
         for child in self.children:

{phylogenie-2.1.6.dist-info → phylogenie-2.1.7.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: phylogenie
-Version: 2.1.6
+Version: 2.1.7
 Summary: Generate phylogenetic datasets with minimal setup effort
 Author: Gabriele Marino
 Author-email: gabmarino.8601@gmail.com
@@ -24,6 +24,8 @@ Description-Content-Type: text/markdown
 
 [![AliSim](https://img.shields.io/badge/Powered%20by-AliSim-orange?style=flat-square)](https://iqtree.github.io/doc/AliSim)
 [![PyPI version](https://img.shields.io/pypi/v/phylogenie)](https://pypi.org/project/phylogenie/)
+![Downloads](https://img.shields.io/pypi/dm/phylogenie)
+
 
 Phylogenie is a [Python](https://www.python.org/) package designed to easily simulate phylogenetic datasets—such as trees and multiple sequence alignments (MSAs)—with minimal setup effort. Simply specify the distributions from which your parameters should be sampled, and Phylogenie will handle the rest!
 

{phylogenie-2.1.6.dist-info → phylogenie-2.1.7.dist-info}/RECORD

@@ -14,7 +14,7 @@ phylogenie/skyline/__init__.py,sha256=7pF4CUb4ZCLzNYJNhOjpuTOLTRhlK7L6ugfccNqjIG
 phylogenie/skyline/matrix.py,sha256=Gl8OgKjtieG0NwPYiPimKI36gefV8fm_OeorjdXxPTs,9146
 phylogenie/skyline/parameter.py,sha256=EM9qlPt0JhMBy3TbztM0dj24BaGNEy8KWKdTObDKhbI,4644
 phylogenie/skyline/vector.py,sha256=bJP7_FNX_Klt6wXqsyfj0KX3VNj6-dIhzCKSJuQcOV0,7115
-phylogenie/tree.py,sha256=KTx3m_tJPdeBqA5i0SA3dwCIobxsFcJwZFunMfDmVBY,2791
+phylogenie/tree.py,sha256=JM4ZccuIh0wesSZ5igK3Wi57dX1peJmj8N0KZdGov9Y,3174
 phylogenie/treesimulator/__init__.py,sha256=XG_xwETKWgDmCihqNUFCcMHtFg4WvZu5qbqWn9Dndt8,879
 phylogenie/treesimulator/events/__init__.py,sha256=UGfvXOVJ_ZAkk_8sBPihjmxciiaEnXZEPFIY53sttWI,940
 phylogenie/treesimulator/events/contact_tracing.py,sha256=_nJ85yhgGkeruQgMHvGpDYoyhheBf8M4LgZWiWdi5dY,4801
@@ -25,8 +25,8 @@ phylogenie/treesimulator/model.py,sha256=0Im6cFTlpMlJrSP4pTTKtvLT9qrQWV8MSTesAsB
 phylogenie/typeguards.py,sha256=JtqmbEWJZBRHbWgCvcl6nrWm3VcBfzRbklbTBYHItn0,1325
 phylogenie/typings.py,sha256=GknvAFXyiaWeeYJ8Lk5d6E2VHT-xW6ONEojYbtJYiB8,476
 phylogenie/utils.py,sha256=pCg9ob0RpLUHwM49x4knKxL4FNPr3-EU_6zMXsvxtAg,370
-phylogenie-2.1.6.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
-phylogenie-2.1.6.dist-info/METADATA,sha256=dkSGsLeSFma9nDy-6J_gAHlOEs2NxjUeJvo4Ey4x5WM,5375
-phylogenie-2.1.6.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
-phylogenie-2.1.6.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
-phylogenie-2.1.6.dist-info/RECORD,,
+phylogenie-2.1.7.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
+phylogenie-2.1.7.dist-info/METADATA,sha256=CZ_2VR75BnBKObxMlc0LZR1sIApDeZMw3IRCuUPT2zM,5432
+phylogenie-2.1.7.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
+phylogenie-2.1.7.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
+phylogenie-2.1.7.dist-info/RECORD,,