phylogenie 2.1.29__py3-none-any.whl → 2.1.30__py3-none-any.whl

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Files changed (6) hide show
  1. phylogenie/io/nexus.py +3 -2
  2. {phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/METADATA +1 -1
  3. {phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/RECORD +6 -6
  4. {phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/LICENSE.txt +0 -0
  5. {phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/WHEEL +0 -0
  6. {phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/entry_points.txt +0 -0
phylogenie/io/nexus.py CHANGED
@@ -9,12 +9,13 @@ from phylogenie.tree import Tree
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  def _parse_translate_block(lines: Iterator[str]) -> dict[str, str]:
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  translations: dict[str, str] = {}
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  for line in lines:
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- match = re.match(r"\s*(\d+)\s+['\"]?([^'\",;]+)['\"]?", line)
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+ line = line.strip()
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+ match = re.match(r"(\d+)\s+['\"]?([^'\",;]+)['\"]?", line)
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  if match is None:
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  if ";" in line:
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  return translations
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  else:
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- raise ValueError(f"Invalid translate line: {line.strip()}")
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+ raise ValueError(f"Invalid translate line: {line}")
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  translations[match.group(1)] = match.group(2)
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  raise ValueError("Translate block not terminated with ';'")
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{phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: phylogenie
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- Version: 2.1.29
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+ Version: 2.1.30
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  Summary: Generate phylogenetic datasets with minimal setup effort
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  Author: Gabriele Marino
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  Author-email: gabmarino.8601@gmail.com
{phylogenie-2.1.29.dist-info → phylogenie-2.1.30.dist-info}/RECORD RENAMED
@@ -10,7 +10,7 @@ phylogenie/generators/typeguards.py,sha256=yj4VkhOaUXJ2OrY-6zhOeY9C4yKIQxjZtk2d-
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  phylogenie/io/__init__.py,sha256=gtRYtDdZSTlWCj3I4vmMJSAs93jdz5RySkCakD3sxlQ,214
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  phylogenie/io/fasta.py,sha256=CUFO06m7wClprarsMheZojM4Os2NQf3ALYUXSWzfNL0,869
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  phylogenie/io/newick.py,sha256=4j7m9B11erVJijye0GfpbWomk2ttlBXdyHNoBc_fvIg,3435
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- phylogenie/io/nexus.py,sha256=KGf0rH8sAVAuPnmhokj2XbQTBsiuhPujJflRixUunGY,1583
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+ phylogenie/io/nexus.py,sha256=wxY8YN0glHUU_OJyR5cN7n7wvWyNrelLOW2FcET6Mxw,1600
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  phylogenie/main.py,sha256=vtvSpQxBNlYABoFQ25czl-l3fIr4QRo3svWVd-jcArw,1170
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  phylogenie/models.py,sha256=pCg9ob0RpLUHwM49x4knKxL4FNPr3-EU_6zMXsvxtAg,370
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  phylogenie/msa.py,sha256=JDGyZUsAq6-m-SQjoCDjAkAZIxfgyl_PDIhdYn5HOow,2064
@@ -32,8 +32,8 @@ phylogenie/treesimulator/model.py,sha256=lhDwmBFQ8Qh8qVGZPgED0vehtPC3DE7_CgCV_8r
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  phylogenie/typeguards.py,sha256=JtqmbEWJZBRHbWgCvcl6nrWm3VcBfzRbklbTBYHItn0,1325
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  phylogenie/typings.py,sha256=p694PBe_tk25A6N8vGGWxuqoDtt3nHFUsIYJrwR_76Y,494
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  phylogenie/utils.py,sha256=ehVk_2kvjW8Q_EyM2kxBPHYiK-KlPmZQx7JeVN6Fh-E,5419
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- phylogenie-2.1.29.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
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- phylogenie-2.1.29.dist-info/METADATA,sha256=mVsGaofekWG_o0Mu2CqYu7RZsEL7MKsY3m5w7wv8hAw,5477
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- phylogenie-2.1.29.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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- phylogenie-2.1.29.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
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- phylogenie-2.1.29.dist-info/RECORD,,
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+ phylogenie-2.1.30.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
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+ phylogenie-2.1.30.dist-info/METADATA,sha256=XRaW1c5BiitXB68zfaDGGVF3sO3-ZGACutgsgDf8BCs,5477
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+ phylogenie-2.1.30.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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+ phylogenie-2.1.30.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
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+ phylogenie-2.1.30.dist-info/RECORD,,