phylogenie 2.1.16__py3-none-any.whl → 2.1.17__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- phylogenie/tree.py +1 -1
- phylogenie/utils.py +1 -1
- {phylogenie-2.1.16.dist-info → phylogenie-2.1.17.dist-info}/METADATA +1 -1
- {phylogenie-2.1.16.dist-info → phylogenie-2.1.17.dist-info}/RECORD +7 -7
- {phylogenie-2.1.16.dist-info → phylogenie-2.1.17.dist-info}/LICENSE.txt +0 -0
- {phylogenie-2.1.16.dist-info → phylogenie-2.1.17.dist-info}/WHEEL +0 -0
- {phylogenie-2.1.16.dist-info → phylogenie-2.1.17.dist-info}/entry_points.txt +0 -0
phylogenie/tree.py
CHANGED
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@@ -26,7 +26,7 @@ class Tree:
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@property
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def depth(self) -> float:
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if self.parent is None:
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-
return 0.
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+
return 0 if self.branch_length is None else self.branch_length
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if self.branch_length is None:
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raise ValueError(f"Branch length of node {self.name} is not set.")
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return self.parent.depth + self.branch_length
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phylogenie/utils.py
CHANGED
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@@ -22,7 +22,7 @@ def get_node_depths(tree: Tree) -> dict[Tree, float]:
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depths: dict[Tree, float] = {}
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for node in tree:
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if node.parent is None:
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-
depths[node] = 0
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depths[node] = 0 if node.branch_length is None else node.branch_length
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else:
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if node.branch_length is None:
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raise ValueError(f"Branch length of node {node.name} is not set.")
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@@ -16,7 +16,7 @@ phylogenie/skyline/__init__.py,sha256=7pF4CUb4ZCLzNYJNhOjpuTOLTRhlK7L6ugfccNqjIG
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phylogenie/skyline/matrix.py,sha256=Gl8OgKjtieG0NwPYiPimKI36gefV8fm_OeorjdXxPTs,9146
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phylogenie/skyline/parameter.py,sha256=EM9qlPt0JhMBy3TbztM0dj24BaGNEy8KWKdTObDKhbI,4644
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phylogenie/skyline/vector.py,sha256=bJP7_FNX_Klt6wXqsyfj0KX3VNj6-dIhzCKSJuQcOV0,7115
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phylogenie/tree.py,sha256=
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+
phylogenie/tree.py,sha256=qaHMEcnqEtjd8Jlo2wF1vw0Gi6tcMlXngK_6IKEaQkw,4568
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phylogenie/treesimulator/__init__.py,sha256=yqS2vtYMhdWSXc9RAnX1dd4zAqSQweMLyVKTnJLfGTU,1106
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phylogenie/treesimulator/events/__init__.py,sha256=6zSgZ0MEUMvTK4yPlSolJnRWzCARLS-jYreTzh45mQo,1033
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phylogenie/treesimulator/events/contact_tracing.py,sha256=_nJ85yhgGkeruQgMHvGpDYoyhheBf8M4LgZWiWdi5dY,4801
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@@ -27,9 +27,9 @@ phylogenie/treesimulator/gillespie.py,sha256=LZHB2Ko147E78LoUCtN_BN7NYO1xhMYRy5P
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phylogenie/treesimulator/model.py,sha256=Nyg6R8XmMwZMSw1-dII81sU9uU7tDe-NMs8v1qKE4_M,5746
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phylogenie/typeguards.py,sha256=JtqmbEWJZBRHbWgCvcl6nrWm3VcBfzRbklbTBYHItn0,1325
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phylogenie/typings.py,sha256=GknvAFXyiaWeeYJ8Lk5d6E2VHT-xW6ONEojYbtJYiB8,476
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-
phylogenie/utils.py,sha256=
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phylogenie-2.1.
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phylogenie-2.1.
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phylogenie-2.1.
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phylogenie-2.1.
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phylogenie-2.1.
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phylogenie/utils.py,sha256=faDicpAtjxM-QDwPKOv8AOxPe7skPUOGKmVWBZRzUbU,1990
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phylogenie-2.1.17.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
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phylogenie-2.1.17.dist-info/METADATA,sha256=TUa2AtURiUDVcWfYzt_6BQYaH7N4Izgco0O5vKVOuH0,5477
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phylogenie-2.1.17.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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phylogenie-2.1.17.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
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phylogenie-2.1.17.dist-info/RECORD,,
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File without changes
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File without changes
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File without changes
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