phylogenie 2.1.14__py3-none-any.whl → 2.1.15__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of phylogenie might be problematic. Click here for more details.

phylogenie/tree.py CHANGED
@@ -1,3 +1,4 @@
1
+ from collections import deque
1
2
  from collections.abc import Iterator
2
3
  from typing import Any
3
4
 
@@ -102,6 +103,13 @@ class Tree:
102
103
  yield from child.postorder_traversal()
103
104
  yield self
104
105
 
106
+ def breadth_first_traversal(self) -> Iterator["Tree"]:
107
+ queue: deque["Tree"] = deque([self])
108
+ while queue:
109
+ node = queue.popleft()
110
+ yield node
111
+ queue.extend(node.children)
112
+
105
113
  def get_node(self, name: str) -> "Tree":
106
114
  for node in self:
107
115
  if node.name == name:
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: phylogenie
3
- Version: 2.1.14
3
+ Version: 2.1.15
4
4
  Summary: Generate phylogenetic datasets with minimal setup effort
5
5
  Author: Gabriele Marino
6
6
  Author-email: gabmarino.8601@gmail.com
@@ -16,7 +16,7 @@ phylogenie/skyline/__init__.py,sha256=7pF4CUb4ZCLzNYJNhOjpuTOLTRhlK7L6ugfccNqjIG
16
16
  phylogenie/skyline/matrix.py,sha256=Gl8OgKjtieG0NwPYiPimKI36gefV8fm_OeorjdXxPTs,9146
17
17
  phylogenie/skyline/parameter.py,sha256=EM9qlPt0JhMBy3TbztM0dj24BaGNEy8KWKdTObDKhbI,4644
18
18
  phylogenie/skyline/vector.py,sha256=bJP7_FNX_Klt6wXqsyfj0KX3VNj6-dIhzCKSJuQcOV0,7115
19
- phylogenie/tree.py,sha256=PjyfsjYWadvIQSOxyIO0oaRVN2pecXEnUR-k1mM4Vic,4159
19
+ phylogenie/tree.py,sha256=EL2bn40AafxQfpA3NP7ohAVA5EoQ87d2JhtulPOyZqg,4413
20
20
  phylogenie/treesimulator/__init__.py,sha256=yqS2vtYMhdWSXc9RAnX1dd4zAqSQweMLyVKTnJLfGTU,1106
21
21
  phylogenie/treesimulator/events/__init__.py,sha256=6zSgZ0MEUMvTK4yPlSolJnRWzCARLS-jYreTzh45mQo,1033
22
22
  phylogenie/treesimulator/events/contact_tracing.py,sha256=_nJ85yhgGkeruQgMHvGpDYoyhheBf8M4LgZWiWdi5dY,4801
@@ -28,8 +28,8 @@ phylogenie/treesimulator/model.py,sha256=Nyg6R8XmMwZMSw1-dII81sU9uU7tDe-NMs8v1qK
28
28
  phylogenie/typeguards.py,sha256=JtqmbEWJZBRHbWgCvcl6nrWm3VcBfzRbklbTBYHItn0,1325
29
29
  phylogenie/typings.py,sha256=GknvAFXyiaWeeYJ8Lk5d6E2VHT-xW6ONEojYbtJYiB8,476
30
30
  phylogenie/utils.py,sha256=l7kJ0mkdhplz_hTUseBxaGpEKngsWUOSiCMyLMIWYZQ,1936
31
- phylogenie-2.1.14.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
32
- phylogenie-2.1.14.dist-info/METADATA,sha256=elXtIXUWfGalXgdhTgretrdYVQwOWwiSfHUiZicf5WQ,5477
33
- phylogenie-2.1.14.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
34
- phylogenie-2.1.14.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
35
- phylogenie-2.1.14.dist-info/RECORD,,
31
+ phylogenie-2.1.15.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
32
+ phylogenie-2.1.15.dist-info/METADATA,sha256=Yrjt2kSAxD3Wx87slr4iu59T7XCHbIhg5JORHsxTxZg,5477
33
+ phylogenie-2.1.15.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
34
+ phylogenie-2.1.15.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
35
+ phylogenie-2.1.15.dist-info/RECORD,,