phylogenie 2.0.13__py3-none-any.whl → 2.0.14__py3-none-any.whl

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Files changed (6) hide show
  1. phylogenie/treesimulator/gillespie.py +4 -2
  2. {phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/METADATA +1 -1
  3. {phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/RECORD +6 -6
  4. {phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/LICENSE.txt +0 -0
  5. {phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/WHEEL +0 -0
  6. {phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/entry_points.txt +0 -0
phylogenie/treesimulator/gillespie.py CHANGED
@@ -60,9 +60,11 @@ def simulate_tree(
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  if not any(rates):
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  break
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- current_time += rng.exponential(1 / sum(rates))
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- if current_time >= max_time:
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+ time_step = rng.exponential(1 / sum(rates))
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+ if current_time + time_step >= max_time:
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+ current_time = max_time
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  break
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+ current_time += time_step
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  if current_time >= next_change_time:
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  current_time = next_change_time
{phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: phylogenie
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- Version: 2.0.13
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+ Version: 2.0.14
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  Summary: Generate phylogenetic datasets with minimal setup effort
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  Author: Gabriele Marino
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  Author-email: gabmarino.8601@gmail.com
{phylogenie-2.0.13.dist-info → phylogenie-2.0.14.dist-info}/RECORD RENAMED
@@ -17,12 +17,12 @@ phylogenie/skyline/vector.py,sha256=bJP7_FNX_Klt6wXqsyfj0KX3VNj6-dIhzCKSJuQcOV0,
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  phylogenie/tree.py,sha256=dk8Sj1tqyGOunVO2crtIqb0LH-ws-PXqA8SuNcYfVHI,1738
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  phylogenie/treesimulator/__init__.py,sha256=INPU9LrPdUmt3dYGzWDRoRKrPR9xENcHu44pJVUbyNA,525
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  phylogenie/treesimulator/events.py,sha256=X3_0U9qqMpYgh6-7TwQEnlUipANkHz6QTCXlm-qXFQk,9524
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- phylogenie/treesimulator/gillespie.py,sha256=4uMt_-Rr3cRXWGKC8veBIB-uqtKtN-dLbAHKjAi_5Mo,3182
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+ phylogenie/treesimulator/gillespie.py,sha256=NHiBLVlpKdcTPohMr6ehywbPeB8gnn6erEv2bkgvf4c,3268
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  phylogenie/treesimulator/model.py,sha256=XpzAicmg2O6K0Trk5YolH-B_HJZxoSauF2wZOMqp-Iw,5559
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  phylogenie/typeguards.py,sha256=JtqmbEWJZBRHbWgCvcl6nrWm3VcBfzRbklbTBYHItn0,1325
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  phylogenie/typings.py,sha256=O1X6lGKTjJ2YJz3ApQ-rYb_tEJNUIcHdUIeYlSM4s5o,500
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- phylogenie-2.0.13.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
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- phylogenie-2.0.13.dist-info/METADATA,sha256=XkYNiu3IYt516JJ8dw-iIo9zonC8LFiB_ZVGhNyw-eY,5473
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- phylogenie-2.0.13.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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- phylogenie-2.0.13.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
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- phylogenie-2.0.13.dist-info/RECORD,,
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+ phylogenie-2.0.14.dist-info/LICENSE.txt,sha256=NUrDqElK-eD3I0WqC004CJsy6cs0JgsAoebDv_42-pw,1071
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+ phylogenie-2.0.14.dist-info/METADATA,sha256=NXOQmoUHSTA2AjrXjt4VKSaM2KO6H2rBF7nrRuGK2f4,5473
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+ phylogenie-2.0.14.dist-info/WHEEL,sha256=sP946D7jFCHeNz5Iq4fL4Lu-PrWrFsgfLXbbkciIZwg,88
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+ phylogenie-2.0.14.dist-info/entry_points.txt,sha256=Rt6_usN0FkBX1ZfiqCirjMN9FKOgFLG8rydcQ8kugeE,51
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+ phylogenie-2.0.14.dist-info/RECORD,,