pheval-exomiser 0.2.5__py3-none-any.whl → 0.2.6__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- pheval_exomiser/prepare/tool_specific_configuration_options.py +13 -13
- {pheval_exomiser-0.2.5.dist-info → pheval_exomiser-0.2.6.dist-info}/METADATA +2 -1
- {pheval_exomiser-0.2.5.dist-info → pheval_exomiser-0.2.6.dist-info}/RECORD +5 -5
- {pheval_exomiser-0.2.5.dist-info → pheval_exomiser-0.2.6.dist-info}/WHEEL +1 -1
- {pheval_exomiser-0.2.5.dist-info → pheval_exomiser-0.2.6.dist-info}/entry_points.txt +0 -0
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@@ -1,5 +1,5 @@
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from pathlib import Path
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from typing import List
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from typing import List, Optional
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from pydantic import BaseModel, Field
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@@ -20,17 +20,17 @@ class ApplicationProperties(BaseModel):
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cache_caffeine_spec (int): Cache limit
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"""
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remm_version: str = Field(None)
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cadd_version: str = Field(None)
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hg19_data_version: str = Field(None)
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hg19_local_frequency_path: Path = Field(None)
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hg19_whitelist_path: Path = Field(None)
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hg38_data_version: str = Field(None)
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hg38_local_frequency_path: Path = Field(None)
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hg38_whitelist_path: Path = Field(None)
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phenotype_data_version: str = Field(None)
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cache_type: str = Field(None)
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cache_caffeine_spec: int = Field(None)
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remm_version: Optional[str] = Field(None)
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cadd_version: Optional[str] = Field(None)
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hg19_data_version: Optional[str] = Field(None)
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hg19_local_frequency_path: Optional[Path] = Field(None)
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hg19_whitelist_path: Optional[Path] = Field(None)
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hg38_data_version: Optional[str] = Field(None)
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hg38_local_frequency_path: Optional[Path] = Field(None)
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hg38_whitelist_path: Optional[Path] = Field(None)
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phenotype_data_version: Optional[str] = Field(None)
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cache_type: Optional[str] = Field(None)
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cache_caffeine_spec: Optional[int] = Field(None)
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class PostProcessing(BaseModel):
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@@ -64,5 +64,5 @@ class ExomiserConfigurations(BaseModel):
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analysis_configuration_file: Path = Field(...)
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max_jobs: int = Field(...)
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application_properties: ApplicationProperties = Field(...)
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output_formats: List[str] = Field(None)
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output_formats: Optional[List[str]] = Field(None)
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post_process: PostProcessing = Field(...)
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.1
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Name: pheval_exomiser
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Version: 0.2.
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Version: 0.2.6
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Summary:
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Author: Yasemin Bridges
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Author-email: y.bridges@qmul.ac.uk
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@@ -10,6 +10,7 @@ Classifier: Programming Language :: Python :: 3.9
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Classifier: Programming Language :: Python :: 3.10
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Classifier: Programming Language :: Python :: 3.11
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Classifier: Programming Language :: Python :: 3.12
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Classifier: Programming Language :: Python :: 3.13
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Requires-Dist: click (>=8.1.3,<9.0.0)
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Requires-Dist: docker (>=6.0.1,<7.0.0)
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Requires-Dist: google (>=3.0.0,<4.0.0)
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@@ -6,13 +6,13 @@ pheval_exomiser/post_process/post_process.py,sha256=ZLIGPeADGZn08jFc152QraiJnYSA
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pheval_exomiser/post_process/post_process_results_format.py,sha256=F1TpgLgeoNFFZTk7XaXLptCLOr6G3tdZC2cltXFtHx8,12261
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pheval_exomiser/prepare/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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pheval_exomiser/prepare/create_batch_commands.py,sha256=tDUBtpfSmNGqHte-vrGnusYZzM59pOX1IAumqRDlnBE,17205
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pheval_exomiser/prepare/tool_specific_configuration_options.py,sha256=
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pheval_exomiser/prepare/tool_specific_configuration_options.py,sha256=4gedZ9iadRXK6tF9P-ju-dhj8-F2-fhrXVhfYIsAxFQ,2922
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pheval_exomiser/prepare/write_application_properties.py,sha256=KmG7GvkQo8AhnhRyqohTFvqjfhEhbcs78UYYoigxJ3w,8933
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pheval_exomiser/prepare/yaml_to_family_phenopacket.py,sha256=Hz77dHpVaRMV1fQWKmOCqCKJfmk_hdpZh_6o7hq9Sec,14452
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pheval_exomiser/run/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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pheval_exomiser/run/run.py,sha256=bK_gL52zRl71Lxe-i-P6L4-dMstxFAG6SVNPO6G823o,7109
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pheval_exomiser/runner.py,sha256=LaWhC0F9LoPvP0Ie1sG2GkC8EG-tWjBBY_tFYmx6dxA,2548
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pheval_exomiser-0.2.
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pheval_exomiser-0.2.
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pheval_exomiser-0.2.
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pheval_exomiser-0.2.
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pheval_exomiser-0.2.6.dist-info/METADATA,sha256=sGthFcX63xsOR0YPiC-cWC4jowGaMm0pT81NHOCrpAo,7526
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pheval_exomiser-0.2.6.dist-info/WHEEL,sha256=Nq82e9rUAnEjt98J6MlVmMCZb-t9cYE2Ir1kpBmnWfs,88
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pheval_exomiser-0.2.6.dist-info/entry_points.txt,sha256=lbZMu-x7ns8UrFveWSqEQ1UB5l33TbRMomqBUyGYIwI,131
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pheval_exomiser-0.2.6.dist-info/RECORD,,
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File without changes
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