phenoml 0.0.1__py3-none-any.whl

phenoml/agent/types/__init__.py

@@ -0,0 +1,45 @@
+# This file was auto-generated by Fern from our API Definition.
+
+# isort: skip_file
+
+from .agent_chat_response import AgentChatResponse
+from .agent_create_request_provider import AgentCreateRequestProvider
+from .agent_create_request_provider_item import AgentCreateRequestProviderItem
+from .agent_delete_response import AgentDeleteResponse
+from .agent_fhir_config import AgentFhirConfig
+from .agent_list_response import AgentListResponse
+from .agent_prompts_response import AgentPromptsResponse
+from .agent_response import AgentResponse
+from .agent_template import AgentTemplate
+from .agent_template_provider import AgentTemplateProvider
+from .agent_template_provider_item import AgentTemplateProviderItem
+from .agent_update_request_provider import AgentUpdateRequestProvider
+from .agent_update_request_provider_item import AgentUpdateRequestProviderItem
+from .chat_fhir_client_config import ChatFhirClientConfig
+from .json_patch import JsonPatch
+from .json_patch_operation import JsonPatchOperation
+from .json_patch_operation_op import JsonPatchOperationOp
+from .prompt_template import PromptTemplate
+from .success_response import SuccessResponse
+
+__all__ = [
+    "AgentChatResponse",
+    "AgentCreateRequestProvider",
+    "AgentCreateRequestProviderItem",
+    "AgentDeleteResponse",
+    "AgentFhirConfig",
+    "AgentListResponse",
+    "AgentPromptsResponse",
+    "AgentResponse",
+    "AgentTemplate",
+    "AgentTemplateProvider",
+    "AgentTemplateProviderItem",
+    "AgentUpdateRequestProvider",
+    "AgentUpdateRequestProviderItem",
+    "ChatFhirClientConfig",
+    "JsonPatch",
+    "JsonPatchOperation",
+    "JsonPatchOperationOp",
+    "PromptTemplate",
+    "SuccessResponse",
+]

phenoml/agent/types/agent_chat_response.py

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+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class AgentChatResponse(UniversalBaseModel):
+    response: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Agent's response
+    """
+
+    success: typing.Optional[bool] = None
+    message: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Status message
+    """
+
+    session_id: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Chat session ID
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_create_request_provider.py

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+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+from .agent_create_request_provider_item import AgentCreateRequestProviderItem
+
+AgentCreateRequestProvider = typing.Union[
+    typing.Literal["medplum"],
+    typing.Literal["google_healthcare"],
+    typing.Literal["canvas"],
+    typing.Literal["hapi"],
+    typing.List[AgentCreateRequestProviderItem],
+]

phenoml/agent/types/agent_create_request_provider_item.py

@@ -0,0 +1,7 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+AgentCreateRequestProviderItem = typing.Union[
+    typing.Literal["medplum", "google_healthcare", "canvas", "hapi"], typing.Any
+]

phenoml/agent/types/agent_delete_response.py

@@ -0,0 +1,20 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class AgentDeleteResponse(UniversalBaseModel):
+    success: typing.Optional[bool] = None
+    message: typing.Optional[str] = None
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_fhir_config.py

@@ -0,0 +1,31 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class AgentFhirConfig(UniversalBaseModel):
+    """
+    Agent-specific FHIR configuration (excludes user-specific fields)
+    """
+
+    fhir_store_id: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    FHIR store ID for Google Healthcare provider
+    """
+
+    instance_name: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Instance name for multi-instance providers
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_list_response.py

@@ -0,0 +1,22 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .agent_template import AgentTemplate
+
+
+class AgentListResponse(UniversalBaseModel):
+    success: typing.Optional[bool] = None
+    message: typing.Optional[str] = None
+    agents: typing.Optional[typing.List[AgentTemplate]] = None
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_prompts_response.py

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+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .prompt_template import PromptTemplate
+
+
+class AgentPromptsResponse(UniversalBaseModel):
+    success: typing.Optional[bool] = None
+    message: typing.Optional[str] = None
+    data: typing.Optional[PromptTemplate] = None
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_response.py

@@ -0,0 +1,22 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .agent_template import AgentTemplate
+
+
+class AgentResponse(UniversalBaseModel):
+    success: typing.Optional[bool] = None
+    message: typing.Optional[str] = None
+    data: typing.Optional[AgentTemplate] = None
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_template.py

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+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .agent_fhir_config import AgentFhirConfig
+from .agent_template_provider import AgentTemplateProvider
+
+
+class AgentTemplate(UniversalBaseModel):
+    id: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Agent ID
+    """
+
+    name: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Agent name
+    """
+
+    description: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Agent description
+    """
+
+    prompts: typing.Optional[typing.List[str]] = pydantic.Field(default=None)
+    """
+    Array of prompt IDs used by this agent
+    """
+
+    is_active: typing.Optional[bool] = pydantic.Field(default=None)
+    """
+    Whether the agent is active
+    """
+
+    tags: typing.Optional[typing.List[str]] = pydantic.Field(default=None)
+    """
+    Tags for categorizing the agent
+    """
+
+    provider: typing.Optional[AgentTemplateProvider] = pydantic.Field(default=None)
+    """
+    FHIR provider type - can be a single provider or array of providers
+    """
+
+    meta: typing.Optional[AgentFhirConfig] = None
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/agent_template_provider.py

@@ -0,0 +1,13 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+from .agent_template_provider_item import AgentTemplateProviderItem
+
+AgentTemplateProvider = typing.Union[
+    typing.Literal["medplum"],
+    typing.Literal["google_healthcare"],
+    typing.Literal["canvas"],
+    typing.Literal["hapi"],
+    typing.List[AgentTemplateProviderItem],
+]

phenoml/agent/types/agent_template_provider_item.py

@@ -0,0 +1,5 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+AgentTemplateProviderItem = typing.Union[typing.Literal["medplum", "google_healthcare", "canvas", "hapi"], typing.Any]

phenoml/agent/types/agent_update_request_provider.py

@@ -0,0 +1,13 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+from .agent_update_request_provider_item import AgentUpdateRequestProviderItem
+
+AgentUpdateRequestProvider = typing.Union[
+    typing.Literal["medplum"],
+    typing.Literal["google_healthcare"],
+    typing.Literal["canvas"],
+    typing.Literal["hapi"],
+    typing.List[AgentUpdateRequestProviderItem],
+]

phenoml/agent/types/agent_update_request_provider_item.py

@@ -0,0 +1,7 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+AgentUpdateRequestProviderItem = typing.Union[
+    typing.Literal["medplum", "google_healthcare", "canvas", "hapi"], typing.Any
+]

phenoml/agent/types/chat_fhir_client_config.py

@@ -0,0 +1,31 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class ChatFhirClientConfig(UniversalBaseModel):
+    """
+    User-specific FHIR configuration overrides for chat requests
+    """
+
+    on_behalf_of_email: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Override email for On-Behalf-Of requests (Medplum only)
+    """
+
+    instance_name: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Override instance name for multi-instance providers
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/json_patch.py

@@ -0,0 +1,7 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+from .json_patch_operation import JsonPatchOperation
+
+JsonPatch = typing.List[JsonPatchOperation]

phenoml/agent/types/json_patch_operation.py

@@ -0,0 +1,36 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+import typing_extensions
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from ...core.serialization import FieldMetadata
+from .json_patch_operation_op import JsonPatchOperationOp
+
+
+class JsonPatchOperation(UniversalBaseModel):
+    op: JsonPatchOperationOp = pydantic.Field()
+    """
+    The operation to be performed
+    """
+
+    path: str = pydantic.Field()
+    """
+    A JSON Pointer string specifying a location within the target document
+    """
+
+    value: typing.Optional[typing.Optional[typing.Any]] = None
+    from_: typing_extensions.Annotated[typing.Optional[str], FieldMetadata(alias="from")] = pydantic.Field(default=None)
+    """
+    A JSON Pointer string specifying the location in the target document to move the value from (used with move and copy operations)
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/json_patch_operation_op.py

@@ -0,0 +1,5 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+JsonPatchOperationOp = typing.Union[typing.Literal["add", "remove", "replace", "move", "copy", "test"], typing.Any]

phenoml/agent/types/prompt_template.py

@@ -0,0 +1,52 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class PromptTemplate(UniversalBaseModel):
+    id: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Prompt ID
+    """
+
+    name: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Prompt name
+    """
+
+    description: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Prompt description
+    """
+
+    content: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Prompt content
+    """
+
+    is_default: typing.Optional[bool] = pydantic.Field(default=None)
+    """
+    Whether this is a default prompt
+    """
+
+    is_active: typing.Optional[bool] = pydantic.Field(default=None)
+    """
+    Whether the prompt is active
+    """
+
+    tags: typing.Optional[typing.List[str]] = pydantic.Field(default=None)
+    """
+    Tags for categorizing the prompt
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/agent/types/success_response.py

@@ -0,0 +1,20 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class SuccessResponse(UniversalBaseModel):
+    success: typing.Optional[bool] = None
+    message: typing.Optional[str] = None
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/authtoken/__init__.py

@@ -0,0 +1,17 @@
+# This file was auto-generated by Fern from our API Definition.
+
+# isort: skip_file
+
+from .types import BadRequestErrorBody, UnauthorizedErrorBody
+from .errors import BadRequestError, UnauthorizedError
+from . import auth
+from .auth import AuthGenerateTokenResponse
+
+__all__ = [
+    "AuthGenerateTokenResponse",
+    "BadRequestError",
+    "BadRequestErrorBody",
+    "UnauthorizedError",
+    "UnauthorizedErrorBody",
+    "auth",
+]

phenoml/authtoken/auth/__init__.py

@@ -0,0 +1,7 @@
+# This file was auto-generated by Fern from our API Definition.
+
+# isort: skip_file
+
+from .types import AuthGenerateTokenResponse
+
+__all__ = ["AuthGenerateTokenResponse"]

phenoml/authtoken/auth/client.py

@@ -0,0 +1,129 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+from ...core.client_wrapper import AsyncClientWrapper, SyncClientWrapper
+from ...core.request_options import RequestOptions
+from .raw_client import AsyncRawAuthClient, RawAuthClient
+from .types.auth_generate_token_response import AuthGenerateTokenResponse
+
+# this is used as the default value for optional parameters
+OMIT = typing.cast(typing.Any, ...)
+
+
+class AuthClient:
+    def __init__(self, *, client_wrapper: SyncClientWrapper):
+        self._raw_client = RawAuthClient(client_wrapper=client_wrapper)
+
+    @property
+    def with_raw_response(self) -> RawAuthClient:
+        """
+        Retrieves a raw implementation of this client that returns raw responses.
+
+        Returns
+        -------
+        RawAuthClient
+        """
+        return self._raw_client
+
+    def generate_token(
+        self, *, username: str, password: str, request_options: typing.Optional[RequestOptions] = None
+    ) -> AuthGenerateTokenResponse:
+        """
+        Obtain an access token using client credentials
+
+        Parameters
+        ----------
+        username : str
+            The user's username or email
+
+        password : str
+            The user's password
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AuthGenerateTokenResponse
+            Successfully generated token
+
+        Examples
+        --------
+        from phenoml import phenoml
+
+        client = phenoml(
+            token="YOUR_TOKEN",
+        )
+        client.authtoken.auth.generate_token(
+            username="username",
+            password="password",
+        )
+        """
+        _response = self._raw_client.generate_token(
+            username=username, password=password, request_options=request_options
+        )
+        return _response.data
+
+
+class AsyncAuthClient:
+    def __init__(self, *, client_wrapper: AsyncClientWrapper):
+        self._raw_client = AsyncRawAuthClient(client_wrapper=client_wrapper)
+
+    @property
+    def with_raw_response(self) -> AsyncRawAuthClient:
+        """
+        Retrieves a raw implementation of this client that returns raw responses.
+
+        Returns
+        -------
+        AsyncRawAuthClient
+        """
+        return self._raw_client
+
+    async def generate_token(
+        self, *, username: str, password: str, request_options: typing.Optional[RequestOptions] = None
+    ) -> AuthGenerateTokenResponse:
+        """
+        Obtain an access token using client credentials
+
+        Parameters
+        ----------
+        username : str
+            The user's username or email
+
+        password : str
+            The user's password
+
+        request_options : typing.Optional[RequestOptions]
+            Request-specific configuration.
+
+        Returns
+        -------
+        AuthGenerateTokenResponse
+            Successfully generated token
+
+        Examples
+        --------
+        import asyncio
+
+        from phenoml import Asyncphenoml
+
+        client = Asyncphenoml(
+            token="YOUR_TOKEN",
+        )
+
+
+        async def main() -> None:
+            await client.authtoken.auth.generate_token(
+                username="username",
+                password="password",
+            )
+
+
+        asyncio.run(main())
+        """
+        _response = await self._raw_client.generate_token(
+            username=username, password=password, request_options=request_options
+        )
+        return _response.data