phenoml 0.0.19__py3-none-any.whl → 0.1.0__py3-none-any.whl

phenoml/construe/types/__init__.py

@@ -2,6 +2,9 @@
 
 # isort: skip_file
 
+from .code_response import CodeResponse
+from .code_system_details import CodeSystemDetails
+from .code_system_info import CodeSystemInfo
 from .construe_upload_code_system_response import ConstrueUploadCodeSystemResponse
 from .extract_codes_result import ExtractCodesResult
 from .extract_request_config import ExtractRequestConfig
@@ -9,9 +12,19 @@ from .extract_request_config_chunking_method import ExtractRequestConfigChunking
 from .extract_request_config_validation_method import ExtractRequestConfigValidationMethod
 from .extract_request_system import ExtractRequestSystem
 from .extracted_code_result import ExtractedCodeResult
+from .get_code_response import GetCodeResponse
+from .list_code_systems_response import ListCodeSystemsResponse
+from .list_codes_response import ListCodesResponse
+from .semantic_search_response import SemanticSearchResponse
+from .semantic_search_result import SemanticSearchResult
+from .text_search_response import TextSearchResponse
+from .text_search_result import TextSearchResult
 from .upload_request_format import UploadRequestFormat
 
 __all__ = [
+    "CodeResponse",
+    "CodeSystemDetails",
+    "CodeSystemInfo",
     "ConstrueUploadCodeSystemResponse",
     "ExtractCodesResult",
     "ExtractRequestConfig",
@@ -19,5 +32,12 @@ __all__ = [
     "ExtractRequestConfigValidationMethod",
     "ExtractRequestSystem",
     "ExtractedCodeResult",
+    "GetCodeResponse",
+    "ListCodeSystemsResponse",
+    "ListCodesResponse",
+    "SemanticSearchResponse",
+    "SemanticSearchResult",
+    "TextSearchResponse",
+    "TextSearchResult",
     "UploadRequestFormat",
 ]

phenoml/construe/types/code_response.py

@@ -0,0 +1,32 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class CodeResponse(UniversalBaseModel):
+    code: str = pydantic.Field()
+    """
+    The code identifier
+    """
+
+    description: str = pydantic.Field()
+    """
+    Short description of the code
+    """
+
+    definition: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Extended definition of the code (if available)
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/code_system_details.py

@@ -0,0 +1,37 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class CodeSystemDetails(UniversalBaseModel):
+    name: str = pydantic.Field()
+    """
+    Code system name
+    """
+
+    version: str = pydantic.Field()
+    """
+    Code system version
+    """
+
+    code_count: int = pydantic.Field()
+    """
+    Total number of codes in the system
+    """
+
+    builtin: bool = pydantic.Field()
+    """
+    Whether this is a built-in system (vs custom uploaded)
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/code_system_info.py

@@ -0,0 +1,27 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class CodeSystemInfo(UniversalBaseModel):
+    name: str = pydantic.Field()
+    """
+    Code system name
+    """
+
+    version: str = pydantic.Field()
+    """
+    Code system version
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/get_code_response.py

@@ -0,0 +1,34 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .code_system_info import CodeSystemInfo
+
+
+class GetCodeResponse(UniversalBaseModel):
+    system: CodeSystemInfo
+    code: str = pydantic.Field()
+    """
+    The code identifier
+    """
+
+    description: str = pydantic.Field()
+    """
+    Short description of the code
+    """
+
+    definition: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Extended definition of the code (if available)
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/list_code_systems_response.py

@@ -0,0 +1,20 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .code_system_details import CodeSystemDetails
+
+
+class ListCodeSystemsResponse(UniversalBaseModel):
+    systems: typing.List[CodeSystemDetails]
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/list_codes_response.py

@@ -0,0 +1,31 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .code_response import CodeResponse
+from .code_system_info import CodeSystemInfo
+
+
+class ListCodesResponse(UniversalBaseModel):
+    system: CodeSystemInfo
+    codes: typing.List[CodeResponse]
+    next_cursor: typing.Optional[str] = pydantic.Field(default=None)
+    """
+    Cursor for fetching the next page (null if no more results)
+    """
+
+    has_more: bool = pydantic.Field()
+    """
+    Whether there are more results available
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/semantic_search_response.py

@@ -0,0 +1,25 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .code_system_info import CodeSystemInfo
+from .semantic_search_result import SemanticSearchResult
+
+
+class SemanticSearchResponse(UniversalBaseModel):
+    system: CodeSystemInfo
+    results: typing.List[SemanticSearchResult] = pydantic.Field()
+    """
+    Codes ordered by semantic similarity (most similar first)
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/semantic_search_result.py

@@ -0,0 +1,20 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class SemanticSearchResult(UniversalBaseModel):
+    code: str
+    description: str
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/text_search_response.py

@@ -0,0 +1,30 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+from .code_system_info import CodeSystemInfo
+from .text_search_result import TextSearchResult
+
+
+class TextSearchResponse(UniversalBaseModel):
+    system: CodeSystemInfo
+    results: typing.List[TextSearchResult] = pydantic.Field()
+    """
+    Codes matching the search query
+    """
+
+    found: int = pydantic.Field()
+    """
+    Total number of matching results (may exceed results array due to pagination)
+    """
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/construe/types/text_search_result.py

@@ -0,0 +1,20 @@
+# This file was auto-generated by Fern from our API Definition.
+
+import typing
+
+import pydantic
+from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
+
+
+class TextSearchResult(UniversalBaseModel):
+    code: str
+    description: str
+
+    if IS_PYDANTIC_V2:
+        model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
+    else:
+
+        class Config:
+            frozen = True
+            smart_union = True
+            extra = pydantic.Extra.allow

phenoml/core/client_wrapper.py

@@ -22,10 +22,10 @@ class BaseClientWrapper:
 
     def get_headers(self) -> typing.Dict[str, str]:
         headers: typing.Dict[str, str] = {
-            "User-Agent": "phenoml/0.0.19",
+            "User-Agent": "phenoml/0.1.0",
             "X-Fern-Language": "Python",
             "X-Fern-SDK-Name": "phenoml",
-            "X-Fern-SDK-Version": "0.0.19",
+            "X-Fern-SDK-Version": "0.1.0",
             **(self.get_custom_headers() or {}),
         }
         headers["Authorization"] = f"Bearer {self._get_token()}"

{phenoml-0.0.19.dist-info → phenoml-0.1.0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: phenoml
-Version: 0.0.19
+Version: 0.1.0
 Summary: 
 Requires-Python: >=3.8,<4.0
 Classifier: Intended Audience :: Developers

{phenoml-0.0.19.dist-info → phenoml-0.1.0.dist-info}/RECORD

@@ -1,6 +1,6 @@
 phenoml/__init__.py,sha256=SeYOCP1ABPA3aB2UDDPr5DOYT4UKKQcw1CHW49I51X8,778
 phenoml/agent/__init__.py,sha256=jFtmc8hd6h1luDhG2EzKyPdZ1a59MUAkE0PmLw3FB20,1569
-phenoml/agent/client.py,sha256=dP8xHpu2rpqG76Qs6HVEnP3Y8xPMQ-oUdOxCHULb5A8,28631
+phenoml/agent/client.py,sha256=5P29TRSyvcGrk62ZoBBIO4BbmzDty-PSNFfhJfG7VFU,27607
 phenoml/agent/errors/__init__.py,sha256=Wnvf4XPELmAIZ-jVxx2t-dBNZ-X9PcDxPSL5EHqJr1Q,434
 phenoml/agent/errors/bad_request_error.py,sha256=nv0bK4gtOnTon6a2NdVxJxHBje_O_7wIoRtXLZHovUQ,339
 phenoml/agent/errors/forbidden_error.py,sha256=ek8-sffTy9gY3F0zyaSkcskDVvq9puXP_YvvB2BJYbA,338
@@ -13,10 +13,10 @@ phenoml/agent/prompts/raw_client.py,sha256=n2R6TL8Rjix8ewpA3b3J68hy_sqlBOxMYMNcV
 phenoml/agent/prompts/types/__init__.py,sha256=N-qiOKtvTg2c7r8DaBddWQDaqjAEve1W-K-yCRLCi84,259
 phenoml/agent/prompts/types/prompts_delete_response.py,sha256=hG7Y3lEyBAF2-cIIicRO5RVoBNOajNR9PHQ-1L2kMK8,599
 phenoml/agent/prompts/types/prompts_list_response.py,sha256=7OzSEUyw2frge0HO7BiZf-I_DJBF0o5e20qsmK1-24s,714
-phenoml/agent/raw_client.py,sha256=FLH3MpaOxjNMDQOBzsQ-dMd-EaahENmxKqTfweGhO_s,67022
+phenoml/agent/raw_client.py,sha256=nrorzmBEFlA6CJbj4q5lg65x07Wg4xQUm1YC2FpxboQ,66112
 phenoml/agent/types/__init__.py,sha256=s9haFGiDhJ7C4RJ_uJj4hGtutBR95qD6ggYlxKdgeOE,1782
 phenoml/agent/types/agent_chat_response.py,sha256=GqPcv7lyZlsypeqFwf1ecouik9A-9xDde0sckYOc8lA,862
-phenoml/agent/types/agent_create_request.py,sha256=zHEnDylu2M6ZcgfxwWJvXTdMa70UqJ6tTYhLMRK151E,1411
+phenoml/agent/types/agent_create_request.py,sha256=1_HbQn1puZDHKrKlmDrYlGyV-HKhrMLSm24jnhIyZKU,1323
 phenoml/agent/types/agent_create_request_provider.py,sha256=SsObiEY03YzReBAuvzevB5gwR1SjXtxxdKuXHtYJ6zg,145
 phenoml/agent/types/agent_delete_response.py,sha256=9lZoZdvn6iBzqkC_jAZlPzJ9ZuEe9XX1_zZNII6pJJA,596
 phenoml/agent/types/agent_get_chat_messages_request_order.py,sha256=LUV7Ngo98ZfHUIsC1P1hL5J_OVfEsW9iruvJAQSwGOU,171
@@ -60,16 +60,22 @@ phenoml/cohort/raw_client.py,sha256=yhquYZ6fNyhAJG_-6YwQqLMOcIP_JvojryxOEXt_Qfc,
 phenoml/cohort/types/__init__.py,sha256=zNq1Pom_534srvUJxnEcFPoUK98Cr4oYzPxvL_ifBmc,218
 phenoml/cohort/types/cohort_response.py,sha256=A0ekTeNT6jh_yMRAcdnMoavcrqUGKZuy_6-k4YwoFmk,981
 phenoml/cohort/types/search_concept.py,sha256=yIGRoIp8ASZ0I0G-9UA6eTseoZPwHrUuvRRQMamf4yA,1041
-phenoml/construe/__init__.py,sha256=cn_KBBh2epzr6fQAEc8WYPK4RtD2gT2tZmz-FfHFAQM,870
-phenoml/construe/client.py,sha256=VdITc7hZo_ihFPX5_S6sDaxaYoxhRNIYMmTLs8UCSv8,9395
-phenoml/construe/errors/__init__.py,sha256=vqkSMWgMY6cxAgnI7Gij9m9UwXrlDWmMS12HylhMSi4,455
+phenoml/construe/__init__.py,sha256=4RjZ8KtqX_siMN5gVigcXfP7UIpQe9Md5uO7wcoojNw,1535
+phenoml/construe/client.py,sha256=VD8fQ26X0fCeToP9bvWVPcbVgkEOL86xPCp7GzRIx_c,26795
+phenoml/construe/errors/__init__.py,sha256=OW8bCfk31qWc4LNXH4Csi91w88lP8Vwjku3kN-X6dYk,718
 phenoml/construe/errors/bad_request_error.py,sha256=nv0bK4gtOnTon6a2NdVxJxHBje_O_7wIoRtXLZHovUQ,339
 phenoml/construe/errors/conflict_error.py,sha256=NyA4yoleBcQcrDK2rF79eVs62xclhih2kpEIBlAToow,337
 phenoml/construe/errors/failed_dependency_error.py,sha256=eXiqG062inkUF7fs2Newhx9uAKReK6fosz29PMD4gVw,345
 phenoml/construe/errors/internal_server_error.py,sha256=biBHJfSP1_zWF5CJgxY4B8wrL1uC18RSccQ-BCKmYNs,343
+phenoml/construe/errors/not_found_error.py,sha256=hQ1KdyGQJCBQqo6iLu2-szlKJdzaoV5odq_7kdXAEbc,337
+phenoml/construe/errors/not_implemented_error.py,sha256=xI30CT0KC5dz6BojqH9VXfa9syDvBp8ofKaWv_PxM0c,343
+phenoml/construe/errors/service_unavailable_error.py,sha256=eY72I1v4lGcCKg76JWWQhXcCIFV7ejpjEMOz4iaWJkE,347
 phenoml/construe/errors/unauthorized_error.py,sha256=h8T6QhXuTo0GLL9MKfIM5p--wDqlB1-ZkMp3lY-aM3E,341
-phenoml/construe/raw_client.py,sha256=xXhtTmLzDELw9TEXWSKk9ZK2UXYNKMfp3IAk2EKxzl0,20722
-phenoml/construe/types/__init__.py,sha256=Id0OJ58ZEQX9Ut-7iMwWEv49MTJLTTmNPH9es1ya8Cw,900
+phenoml/construe/raw_client.py,sha256=liF12jN6_X7F4N1mvjo2ETJb3y3o6i9myOYQnV-3sZw,62166
+phenoml/construe/types/__init__.py,sha256=J2zYQRjytXyrpfRYwVgTji9Cqt5eDiVqKF1oe1Q4vmY,1672
+phenoml/construe/types/code_response.py,sha256=w9DNpGQLEwCtQjY_EyQ7ARF6FFcyY0PJn5PgrmzxbwI,806
+phenoml/construe/types/code_system_details.py,sha256=fq6SFEObhTDD4DSplavTKvcQed7AZI6IXdXL7VTCFN8,867
+phenoml/construe/types/code_system_info.py,sha256=M5bfzOJV11UDMtTVUzDBQ_OQwmCtSccGPTTRF8Betrk,655
 phenoml/construe/types/construe_upload_code_system_response.py,sha256=s0m5EHpkhkp7hYiC5zLZeIeqQ4mrwXlPI1Msihb-ZGo,566
 phenoml/construe/types/extract_codes_result.py,sha256=DbVDLWqtmt9TyD5MC0q8grgnNXPnXq4eJnLDinTe0uc,701
 phenoml/construe/types/extract_request_config.py,sha256=2A22PNA1Hxq9qz1x89LvbySF-Hw8iB6oA2QqoSIrvg8,2112
@@ -77,10 +83,17 @@ phenoml/construe/types/extract_request_config_chunking_method.py,sha256=AmVPPj0o
 phenoml/construe/types/extract_request_config_validation_method.py,sha256=6uUqKn8DXF34EDtNKPa6KLW07DsxgQF2aR5BGdG5Fd4,199
 phenoml/construe/types/extract_request_system.py,sha256=50qkxvinJKS5y1_glr-OFe5tQRyMWLYpeny1NZ9gFzw,1191
 phenoml/construe/types/extracted_code_result.py,sha256=3mIHO952KjbMRBY_YvwBt75XOjqdflg9Odc-xBbURac,1321
+phenoml/construe/types/get_code_response.py,sha256=cDR4SI3AvfQnpOlblXOCLOizxPjFacKmBWyC789o5cw,881
+phenoml/construe/types/list_code_systems_response.py,sha256=XPHSKsg6sIYAyLgIlSJRtkj6KtfCslL01V21HubzyWo,612
+phenoml/construe/types/list_codes_response.py,sha256=f5ZOQ6nYUGYX2S1nc1qtScm-EcNUHWHxpJxq9BH7pFo,909
+phenoml/construe/types/semantic_search_response.py,sha256=Cy5JlF7gDAgc51FvNwjNxHpJDUoMg2zafcdG9AIeKh0,789
+phenoml/construe/types/semantic_search_result.py,sha256=kkz_DYb6u2Z2XLUXYomwhW4PLWlOIM9gI2_SlhKZo6E,549
+phenoml/construe/types/text_search_response.py,sha256=yT0YxBkDg94446Q9djAs0ZwB4ELrcwu8pVTyraG48N4,880
+phenoml/construe/types/text_search_result.py,sha256=FqHzcSBId9Pcp68gB10aJJYsHpsyxJUoKdbvn22cELU,545
 phenoml/construe/types/upload_request_format.py,sha256=5mJhMM7R7hn6gGQNDJT9lxPDsRpUkRzqNxtRU0Nnlls,158
 phenoml/core/__init__.py,sha256=lTcqUPXcx4112yLDd70RAPeqq6tu3eFMe1pKOqkW9JQ,1562
 phenoml/core/api_error.py,sha256=44vPoTyWN59gonCIZMdzw7M1uspygiLnr3GNFOoVL2Q,614
-phenoml/core/client_wrapper.py,sha256=A9qX27YZ-PT5TTQwVrqWWPwUgQ5cTJCtn6ll3KFqwrs,2643
+phenoml/core/client_wrapper.py,sha256=ISuFtaswd6zrd8G7W-UwZL-1Juy52BLAD4Jnq9Zb0U8,2641
 phenoml/core/datetime_utils.py,sha256=nBys2IsYrhPdszxGKCNRPSOCwa-5DWOHG95FB8G9PKo,1047
 phenoml/core/file.py,sha256=d4NNbX8XvXP32z8KpK2Xovv33nFfruIrpz0QWxlgpZk,2663
 phenoml/core/force_multipart.py,sha256=awxh5MtcRYe74ehY8U76jzv6fYM_w_D3Rur7KQQzSDk,429
@@ -251,7 +264,7 @@ phenoml/workflows/types/workflows_delete_response.py,sha256=izcubUOnSNOgThD9Ozo6
 phenoml/workflows/types/workflows_get_response.py,sha256=gfNyUs14JSynprRwT-fuq4IDsGrPZmUSsK3WmgqIEi8,891
 phenoml/workflows/types/workflows_update_response.py,sha256=FEvQpC9ZRk8dV1oaIAwV5bSDD2tkXZ5fG4mozRjibuQ,1046
 phenoml/wrapper_client.py,sha256=JYTdhXgju4tOsata06wQY_ZbMsuMj3qaxkgvDzpY068,5022
-phenoml-0.0.19.dist-info/LICENSE,sha256=Am1fNNveR2gcmOloSWQTsnUw2SQEF8HtowFqIvlagfk,1064
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