phenoml 0.0.18__py3-none-any.whl → 0.0.20__py3-none-any.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- phenoml/agent/__init__.py +4 -0
- phenoml/agent/client.py +27 -52
- phenoml/agent/raw_client.py +23 -44
- phenoml/agent/types/__init__.py +4 -0
- phenoml/agent/types/agent_create_request.py +0 -5
- phenoml/agent/types/agent_get_chat_messages_request_role.py +5 -0
- phenoml/agent/types/chat_message_template.py +7 -2
- phenoml/agent/types/chat_message_template_role.py +5 -0
- phenoml/core/client_wrapper.py +2 -2
- phenoml/fhir_provider/__init__.py +8 -2
- phenoml/fhir_provider/client.py +66 -21
- phenoml/fhir_provider/raw_client.py +70 -47
- phenoml/fhir_provider/types/__init__.py +8 -2
- phenoml/fhir_provider/types/fhir_provider_auth_config.py +12 -0
- phenoml/fhir_provider/types/fhir_provider_list_response.py +14 -2
- phenoml/fhir_provider/types/fhir_provider_list_response_fhir_providers_item.py +8 -0
- phenoml/fhir_provider/types/fhir_provider_response.py +9 -2
- phenoml/fhir_provider/types/fhir_provider_response_data.py +8 -0
- phenoml/fhir_provider/types/fhir_provider_sandbox_info.py +46 -0
- phenoml/fhir_provider/types/provider.py +3 -1
- phenoml/fhir_provider/types/service_account_metadata.py +41 -0
- phenoml/lang2fhir/__init__.py +2 -0
- phenoml/lang2fhir/client.py +34 -4
- phenoml/lang2fhir/raw_client.py +34 -4
- phenoml/lang2fhir/types/__init__.py +2 -0
- phenoml/lang2fhir/types/search_response.py +7 -4
- phenoml/lang2fhir/types/search_response_resource_type.py +39 -0
- {phenoml-0.0.18.dist-info → phenoml-0.0.20.dist-info}/METADATA +1 -1
- {phenoml-0.0.18.dist-info → phenoml-0.0.20.dist-info}/RECORD +31 -25
- phenoml/fhir_provider/types/fhir_provider_set_active_auth_config_response.py +0 -22
- {phenoml-0.0.18.dist-info → phenoml-0.0.20.dist-info}/LICENSE +0 -0
- {phenoml-0.0.18.dist-info → phenoml-0.0.20.dist-info}/WHEEL +0 -0
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# This file was auto-generated by Fern from our API Definition.
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import typing
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import pydantic
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from ...core.pydantic_utilities import IS_PYDANTIC_V2, UniversalBaseModel
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class ServiceAccountMetadata(UniversalBaseModel):
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"""
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Non-sensitive metadata from a Google Cloud Service Account, exposed in API responses to help identify auth configurations without revealing sensitive credentials.
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"""
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type: typing.Optional[str] = pydantic.Field(default=None)
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"""
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Account type (always "service_account")
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"""
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project_id: typing.Optional[str] = pydantic.Field(default=None)
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"""
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Google Cloud project ID
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"""
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client_email: typing.Optional[str] = pydantic.Field(default=None)
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"""
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Service account email address
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"""
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client_id: typing.Optional[str] = pydantic.Field(default=None)
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"""
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Service account client ID
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"""
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if IS_PYDANTIC_V2:
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model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True) # type: ignore # Pydantic v2
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else:
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class Config:
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frozen = True
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smart_union = True
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extra = pydantic.Extra.allow
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phenoml/lang2fhir/__init__.py
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FhirResource,
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Lang2FhirUploadProfileResponse,
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SearchResponse,
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SearchResponseResourceType,
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)
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from .errors import BadRequestError, FailedDependencyError, ForbiddenError, InternalServerError, UnauthorizedError
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"InternalServerError",
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"Lang2FhirUploadProfileResponse",
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"SearchResponse",
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"SearchResponseResourceType",
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"UnauthorizedError",
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]
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phenoml/lang2fhir/client.py
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def search(self, *, text: str, request_options: typing.Optional[RequestOptions] = None) -> SearchResponse:
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"""
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Converts natural language text into FHIR search parameters
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Converts natural language text into FHIR search parameters.
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Automatically identifies the appropriate FHIR resource type and generates valid search query parameters.
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Supported resource types include: AllergyIntolerance, Appointment, CarePlan, CareTeam, Condition,
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Coverage, Device, DiagnosticReport, DocumentReference, Encounter, Goal, Immunization, Location,
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Medication, MedicationRequest, Observation, Organization, Patient, PlanDefinition, Practitioner,
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PractitionerRole, Procedure, Provenance, Questionnaire, QuestionnaireResponse, RelatedPerson,
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Schedule, ServiceRequest, Slot, and Specimen.
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Parameters
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----------
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text : str
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Natural language text to convert into FHIR search parameters
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Natural language text to convert into FHIR search parameters.
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The system will automatically identify the appropriate resource type and generate valid search parameters.
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Examples:
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- "Appointments between March 2-9, 2025" → Appointment search with date range
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- "Patients with diabetes" → Condition search with code parameter
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- "Active medication requests for metformin" → MedicationRequest search
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- "Lab results for creatinine" → DiagnosticReport search
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- "Dr. Smith's schedule" → Practitioner or Schedule search
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request_options : typing.Optional[RequestOptions]
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Request-specific configuration.
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async def search(self, *, text: str, request_options: typing.Optional[RequestOptions] = None) -> SearchResponse:
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"""
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Converts natural language text into FHIR search parameters
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Converts natural language text into FHIR search parameters.
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Automatically identifies the appropriate FHIR resource type and generates valid search query parameters.
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Supported resource types include: AllergyIntolerance, Appointment, CarePlan, CareTeam, Condition,
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Coverage, Device, DiagnosticReport, DocumentReference, Encounter, Goal, Immunization, Location,
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Medication, MedicationRequest, Observation, Organization, Patient, PlanDefinition, Practitioner,
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PractitionerRole, Procedure, Provenance, Questionnaire, QuestionnaireResponse, RelatedPerson,
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Schedule, ServiceRequest, Slot, and Specimen.
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Parameters
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----------
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text : str
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Natural language text to convert into FHIR search parameters
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Natural language text to convert into FHIR search parameters.
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The system will automatically identify the appropriate resource type and generate valid search parameters.
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Examples:
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- "Appointments between March 2-9, 2025" → Appointment search with date range
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- "Patients with diabetes" → Condition search with code parameter
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- "Active medication requests for metformin" → MedicationRequest search
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- "Lab results for creatinine" → DiagnosticReport search
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- "Dr. Smith's schedule" → Practitioner or Schedule search
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request_options : typing.Optional[RequestOptions]
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Request-specific configuration.
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phenoml/lang2fhir/raw_client.py
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self, *, text: str, request_options: typing.Optional[RequestOptions] = None
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) -> HttpResponse[SearchResponse]:
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"""
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Converts natural language text into FHIR search parameters
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Converts natural language text into FHIR search parameters.
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Automatically identifies the appropriate FHIR resource type and generates valid search query parameters.
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Supported resource types include: AllergyIntolerance, Appointment, CarePlan, CareTeam, Condition,
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Coverage, Device, DiagnosticReport, DocumentReference, Encounter, Goal, Immunization, Location,
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Medication, MedicationRequest, Observation, Organization, Patient, PlanDefinition, Practitioner,
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PractitionerRole, Procedure, Provenance, Questionnaire, QuestionnaireResponse, RelatedPerson,
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Schedule, ServiceRequest, Slot, and Specimen.
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Parameters
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text : str
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Natural language text to convert into FHIR search parameters
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Natural language text to convert into FHIR search parameters.
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The system will automatically identify the appropriate resource type and generate valid search parameters.
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Examples:
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- "Appointments between March 2-9, 2025" → Appointment search with date range
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- "Patients with diabetes" → Condition search with code parameter
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- "Active medication requests for metformin" → MedicationRequest search
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- "Lab results for creatinine" → DiagnosticReport search
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- "Dr. Smith's schedule" → Practitioner or Schedule search
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request_options : typing.Optional[RequestOptions]
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Request-specific configuration.
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"""
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Supported resource types include: AllergyIntolerance, Appointment, CarePlan, CareTeam, Condition,
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Coverage, Device, DiagnosticReport, DocumentReference, Encounter, Goal, Immunization, Location,
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Medication, MedicationRequest, Observation, Organization, Patient, PlanDefinition, Practitioner,
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PractitionerRole, Procedure, Provenance, Questionnaire, QuestionnaireResponse, RelatedPerson,
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Schedule, ServiceRequest, Slot, and Specimen.
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from .lang2fhir_upload_profile_response import Lang2FhirUploadProfileResponse
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from .search_response import SearchResponse
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from .search_response_resource_type import SearchResponseResourceType
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__all__ = [
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from .search_response_resource_type import SearchResponseResourceType
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class SearchResponse(UniversalBaseModel):
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resource_type: typing_extensions.Annotated[
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typing.Optional[SearchResponseResourceType], FieldMetadata(alias="resourceType")
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] = pydantic.Field(default=None)
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FHIR search parameters in standard format
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FHIR search parameters in standard query string format.
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Parameters are formatted according to the FHIR specification with appropriate operators.
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Code parameters are resolved to standard terminology codes (SNOMED CT, LOINC, RxNorm, ICD-10-CM).
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"""
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# This file was auto-generated by Fern from our API Definition.
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import typing
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SearchResponseResourceType = typing.Union[
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typing.Literal[
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"AllergyIntolerance",
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"Appointment",
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"CarePlan",
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"Location",
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"Medication",
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"Organization",
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"Patient",
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"PlanDefinition",
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"Procedure",
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"Questionnaire",
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],
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typing.Any,
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]
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phenoml/__init__.py,sha256=SeYOCP1ABPA3aB2UDDPr5DOYT4UKKQcw1CHW49I51X8,778
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phenoml/agent/__init__.py,sha256=
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phenoml/agent/client.py,sha256=
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phenoml/agent/__init__.py,sha256=jFtmc8hd6h1luDhG2EzKyPdZ1a59MUAkE0PmLw3FB20,1569
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phenoml/agent/client.py,sha256=5P29TRSyvcGrk62ZoBBIO4BbmzDty-PSNFfhJfG7VFU,27607
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phenoml/agent/errors/__init__.py,sha256=Wnvf4XPELmAIZ-jVxx2t-dBNZ-X9PcDxPSL5EHqJr1Q,434
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phenoml/agent/errors/bad_request_error.py,sha256=nv0bK4gtOnTon6a2NdVxJxHBje_O_7wIoRtXLZHovUQ,339
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phenoml/agent/errors/forbidden_error.py,sha256=ek8-sffTy9gY3F0zyaSkcskDVvq9puXP_YvvB2BJYbA,338
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phenoml/agent/prompts/types/__init__.py,sha256=N-qiOKtvTg2c7r8DaBddWQDaqjAEve1W-K-yCRLCi84,259
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phenoml/agent/prompts/types/prompts_delete_response.py,sha256=hG7Y3lEyBAF2-cIIicRO5RVoBNOajNR9PHQ-1L2kMK8,599
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phenoml/agent/prompts/types/prompts_list_response.py,sha256=7OzSEUyw2frge0HO7BiZf-I_DJBF0o5e20qsmK1-24s,714
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phenoml/core/force_multipart.py,sha256=awxh5MtcRYe74ehY8U76jzv6fYM_w_D3Rur7KQQzSDk,429
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# This file was auto-generated by Fern from our API Definition.
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