phc-ingestion 0.10.10__py3-none-any.whl → 0.10.11__py3-none-any.whl

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -44,7 +44,7 @@ def process(vcf_file, out_path, file_name, source_file_id, ingestion_id, account
44
44
  }
45
45
  ]
46
46
 
47
- create_yaml(manifest, file_name)
47
+ create_yaml(manifest, f"{out_path}/{file_name}")
48
48
 
49
49
  # Hard-code genome reference for Nebula VCFs
50
50
  genome_reference = "GRCh38"
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: phc-ingestion
3
- Version: 0.10.10
3
+ Version: 0.10.11
4
4
  Summary: Functions for LifeOmic PHC genomic ingestions
5
5
  License: MIT
6
6
  Author-email: LifeOmic Development <development@lifeomic.com>
@@ -29,7 +29,7 @@ ingestion/generic/utils.py,sha256=1MEIru7uq38IjUdL8lcHqDH0oTki9uWrz1f2e-pmRoU,28
29
29
  ingestion/nebula/__init__.py,sha256=VauK-rup_N8ZXVohx3HYqHX_PE_WoPyMUhdv2R7al4o,45
30
30
  ingestion/nebula/constants.py,sha256=thKqSwemdaAwAmKvF4FEVI9l1Ph5ergsnMlx6nWte7E,357
31
31
  ingestion/nebula/manifest_assembler.py,sha256=Og1g_HD0cR9osH5eWdttgFEEayimaZRO7QckC9U9YKM,6383
32
- ingestion/nebula/process.py,sha256=NhlaMl6q2nTocWZvTUVMKaq1IghiZKyqSjnWApchnAU,2331
32
+ ingestion/nebula/process.py,sha256=vQZIyQH3iL2PG1xyyKLv5PsnnVsQ_fBBGzrP8oRJ5FA,2347
33
33
  ingestion/nextgen/__init__.py,sha256=7LQ-h_Bvc5P1QcHMdzsqi1Qm4fTJn04-ozar2ty9wSc,59
34
34
  ingestion/nextgen/process.py,sha256=5Z0RfclwTAYZruGDiLPutjPCYFh1DJpoWY9dnttghT4,3993
35
35
  ingestion/nextgen/util/alteration_table.py,sha256=JTWBL1Fqj_pGsH5vwuVEnCUJle2wOBk6VYImHYCF9vg,6129
@@ -59,6 +59,6 @@ ingestion/vcf_standardization/util/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQe
59
59
  ingestion/vcf_standardization/util/af_helpers.py,sha256=dpTzoeIQVeBRt0ETF3a9rp5ojZqznHg4x_hCZ8OPcOg,1061
60
60
  ingestion/vcf_standardization/util/dp_helpers.py,sha256=Nq8oLOLObu4_pv16qwwgpALRlUoJVCULrd9cFOD-eoI,823
61
61
  ingestion/vcf_standardization/util/read_write.py,sha256=x3Pf6Dq8tmolblbCS5CrNmrcHS3FGfqBSFpFgvFGC4g,2526
62
- phc_ingestion-0.10.10.dist-info/WHEEL,sha256=B19PGBCYhWaz2p_UjAoRVh767nYQfk14Sn4TpIZ-nfU,87
63
- phc_ingestion-0.10.10.dist-info/METADATA,sha256=8wvmYqBCNwJ4ODMbdwnUQtC2KOdu7QbxmRj7LWapzXk,678
64
- phc_ingestion-0.10.10.dist-info/RECORD,,
62
+ phc_ingestion-0.10.11.dist-info/WHEEL,sha256=B19PGBCYhWaz2p_UjAoRVh767nYQfk14Sn4TpIZ-nfU,87
63
+ phc_ingestion-0.10.11.dist-info/METADATA,sha256=tRkIKGt0Yqk_NmBaE0qtD-tko63m3LozUr2V7ycoYzs,678
64
+ phc_ingestion-0.10.11.dist-info/RECORD,,