petal-qc 0.0.3__py3-none-any.whl → 0.0.5__py3-none-any.whl

petal_qc/thermal/analyze_IRCore.py

@@ -3,6 +3,7 @@
 import json
 import os
 import sys
+import bisect
 from pathlib import Path
 
 import matplotlib.dates as pldates
@@ -19,6 +20,14 @@ from petal_qc.thermal import Petal_IR_Analysis
 
 CO2_Temp_setting = -35
 
+def get_array_as_string(A):
+    """Return a string rerpresentation."""
+    sss="["
+    for v in A:
+        sss += " {:5.3f}".format(v)
+
+    sss+=" ]"
+    return sss
 
 def get_acceptance_band():
     """returns the width of the acceptance band."""
@@ -362,6 +371,9 @@ def compare_golden(core, golden, value):
         golden (AnalysisResult): The golden avrage
         value (str): The name of the variable to compare
 
+    Returns:
+        (pass, max difference, array of location of outsiders)
+
     """
     Y = getattr(core, value)
     gY = getattr(golden, value)
@@ -373,18 +385,23 @@ def compare_golden(core, golden, value):
         X = np.array([float(x) for x in range(10)])
         gX = X
 
-    # convert to golden X
-    spln = CubicSpline(X, Y)
-    gC = np.array([spln(x) for x in gX])
-
     # compute difference
     band = get_acceptance_band()
-    diff = np.abs(gC-gY)
-    outsiders = np.where(diff > band)
-    mxval = np.amax(diff)
+    outsiders = []
+    mxval = -1
+    indx = 1
+    for x, y in zip(X, Y):
+        indx = bisect.bisect_left(gX, x, lo=(indx-1 if indx>1 else 0))
+        val = gY[indx]
+        diff = abs(y-val)
+        if diff > mxval:
+            mxval = diff
+
+        if diff>band:
+            outsiders.append(x)
 
     rc = mxval < band
-    return rc, mxval, len(outsiders)
+    return rc, mxval, outsiders
 
 
 def analyze_petal_cores(files, golden, options):
@@ -456,15 +473,16 @@ def analyze_petal_cores(files, golden, options):
                 if val[0]:
                     continue
 
-                if val[2] < 2:
-                    dbOut["comments"].append(
-                        "{} in side {}: 1 point out of acceptance band.".format(
-                            key, iside)
-                    )
-                else:
+                noutsiders = len(val[2])
+                #if noutsiders < 2:
+                #    dbOut["comments"].append(
+                #        "{} in side {}: 1 point out of acceptance band. {}".format(
+                #            key, iside, val[2])
+                #    )
+                if noutsiders>0:
                     dbOut["defects"].append(
                         {"name": key,
-                            "description": "{} in side {}: {} points out of acceptance band".format(key, iside, val[2]),
+                            "description": "{} in side {}: {} points out of acceptance band. {}".format(key, iside, noutsiders, get_array_as_string(val[2])),
                             "properties": "{} > {}".format(val[1], get_acceptance_band())
                          }
                     )

petal_qc/thermal/coreThermal.py

@@ -11,6 +11,7 @@ import itkdb_gtk.ITkDButils
 import itkdb_gtk.dbGtkUtils
 import itkdb_gtk.UploadTest
 
+__HELP__ = "https://petal-qc.docs.cern.ch"
 
 try:
     import petal_qc
@@ -45,7 +46,7 @@ class CoreThermal(itkdb_gtk.dbGtkUtils.ITkDBWindow):
             title: Window title.
             panel_size: size of message pannel.
         """
-        super().__init__(session=session, title=title)
+        super().__init__(session=session, title=title, help_link=__HELP__ )
 
         self.petal_SN = None
         self.param = params if params else IRPetalParam()
@@ -167,7 +168,8 @@ class CoreThermal(itkdb_gtk.dbGtkUtils.ITkDBWindow):
         self.irbfile = PSF
         self.param.files =[PSF,]
         
-        DB = ReadGraphana("localhost")
+        #DB = ReadGraphana("localhost")
+        DB = ReadGraphana()
         irbf = IRBFile.open_file(self.irbfile)
         getter = IRDataGetter.factory(self.param.institute, self.param)
         frames = getter.get_analysis_frame(irbf)

petal_qc/thermal/create_IRCore.py

@@ -75,9 +75,11 @@ def clean_figures():
 def get_inlet_temp(irbf, param):
     """Gets the value of the inlet temperature from Graphana."""
 
+    print("# Getting the Inlet temperature. Contacting Graphana...")
     out = -9999
     getter = IRDataGetter.factory(param.institute, param)
-    DB = ReadGraphana("localhost")
+    #DB = ReadGraphana("localhost")
+    DB = ReadGraphana()
     frames = getter.get_analysis_frame(irbf)
     the_time = frames[0].timestamp
     try:
@@ -113,14 +115,14 @@ def create_IR_core(options):
     if irbf is None:
         print("Could not fine input file: {}".format(options.files))
         return
-    
+
     if options.tco2 <= -999:
         out = get_inlet_temp(irbf, options)
         if out <= -999:
             print("### Cannot get Tcos. Setting to default.")
             P = IRPetalParam()
             out = P.tco2
-            
+
         options.tco2 = out
 
     # Set parameters from command line

petal_qc/thermal/create_core_report.py

@@ -81,17 +81,35 @@ def create_report(options):
     figures = plot_profile_and_golden(golden, core, "path_temp")
     document.add_heading('Temperature along path', level=1)
     document.add_picture(figures[0], True, 12, caption="Petal core .vs. Golden (side 0).")
-    document.add_picture(figures[0], True, 12, caption="Petal core .vs. Golden (side 1).")
+    document.add_picture(figures[1], True, 12, caption="Petal core .vs. Golden (side 1).")
     for F in figures:
         plt.close(F)
 
     figures = plot_profile_and_golden(golden, core, "sensor_avg")
-    document.add_heading('Average Temperatur on sensors areas.', level=1)
+    document.add_heading('Average Temperature on sensors areas.', level=1)
     document.add_picture(figures[0], True, 12, caption="Sensors .vs. Golden (side 0).")
-    document.add_picture(figures[0], True, 12, caption="Sensors .vs. Golden (side 1).")
+    document.add_picture(figures[1], True, 12, caption="Sensors .vs. Golden (side 1).")
     for F in figures:
         plt.close(F)
 
+    document.add_heading('Comments and Defects.', level=1)
+    added_defects = False
+    if len(outDB["comments"])>0:
+        added_defects = True
+        document.add_heading("Comments.", level=2)
+        for C in outDB["comments"]:
+            document.add_paragraph(C)
+
+    if len(outDB["defects"])>0:
+        added_defects = True
+        document.add_heading("Defects.", level=2)
+        for D in outDB["defects"]:
+            document.add_paragraph("{}: {}".format(D["name"], D["description"]))
+
+    if not added_defects:
+        document.add_paragraph("Petal is GOOD. No comments nor defects found.")
+
+
     ofile = utils.output_folder(options.folder, "{}-thermal.docx".format(options.SN))
     document.save(ofile)
 

petal_qc/utils/Geometry.py

@@ -534,14 +534,14 @@ class Line(object):
                     return
 
                 self.m = delta_y/delta_x
-                self.b = - self.m * n.x + n.y
+                self.b = -self.m * n.x + n.y
                 self.O = Point(m.x, m.y)
                 self.delta = Point(delta_x, delta_y)
                 self.V = self.delta.norm()
 
             else:  # n has to be a number
                 self.m = n
-                self.b = - self.m * m.x + m.y
+                self.b = -self.m * m.x + m.y
                 alpha = math.atan(n)
                 self.O = m
                 self.V = Point(math.cos(alpha), math.sin(alpha))
@@ -605,7 +605,12 @@ class Line(object):
 
     def line_perpendicular_at_point(self, P):
         """Return the line perpendicular passing by point."""
-        L = Line(-1.0/self.m, P)
+        if self.m==0:
+            P0 = Point(P.x, P.y+1.0)
+            L = Line(P0, P)
+        else:
+            L = Line(-1.0/self.m, P)
+
         return L
 
     def line_parallel_at_distance(self, d):

{petal_qc-0.0.3.dist-info → petal_qc-0.0.5.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: petal_qc
-Version: 0.0.3
+Version: 0.0.5
 Summary: A collection of scripts for Petal CORE QC.
 Author-email: Carlos Lacasta <carlos.lacasta@cern.ch>
 Project-URL: Homepage, https://gitlab.cern.ch/atlas-itk/sw/db/itk-pdb-gtk-gui-utils

{petal_qc-0.0.3.dist-info → petal_qc-0.0.5.dist-info}/RECORD

@@ -1,51 +1,52 @@
-petal_qc/__init__.py,sha256=T6LHv2FfNKEZoPz6lXy-NcguLXFG0cYPK7I-NCR2Ng4,472
-petal_qc/dashBoard.py,sha256=aPugRYhCcAzEBPrCyh8A8QKYaB4Q-_T1q3r5A3J2eog,553
-petal_qc/BTreport/CheckBTtests.py,sha256=4hNP1V-zcFBN5UvWVbx9nAmittF8Jmb5J17L33t68Eg,9086
+petal_qc/__init__.py,sha256=cIoOb3RvjVFo658SpBKBMj8LbpzX-fjQIhbjxL_zDjY,782
+petal_qc/dashBoard.py,sha256=D2f1rB_saQYiv9mqJT9Sit44jsXviYBvc-b04CjWCa8,3389
+petal_qc/BTreport/CheckBTtests.py,sha256=W8KktZUya5qIkcOc4fNHgrtVnQfI_hPxZvbLCINDnqw,8378
 petal_qc/BTreport/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 petal_qc/BTreport/bustapeReport.py,sha256=c5VERxPm6BOgW_yN9O_bEPmCYpuwZ_Yt_I2sMVAp0-I,6895
 petal_qc/metrology/Cluster.py,sha256=UtZ5q1EFb8f3qC0hEYBbhRg2pPbW_28aJX2EEMu00Ho,2105
 petal_qc/metrology/DataFile.py,sha256=PbFqy3-WSj69epV5EjhHc1GKhA8I74FmJYOXUjN0V20,1367
-petal_qc/metrology/PetalMetrology.py,sha256=H4MwuQ2QxP_Td9KtMly_-osXT1owigzC7QlmRub7oRo,11886
+petal_qc/metrology/PetalMetrology.py,sha256=UoPuvkh2DTnfsMRoSyIHq__SzJeTIEBNhzjptbfFcsQ,13099
 petal_qc/metrology/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 petal_qc/metrology/all2csv.py,sha256=KTgEGaediylwkGN7gyWyQqUjU0f9FOa3xF4z1W38EcU,1569
-petal_qc/metrology/analyze_locking_points.py,sha256=FjLte9VgxVMfR-b1DlViWDsa2vl3ZKfCCptyibEjBUY,20519
+petal_qc/metrology/analyze_locking_points.py,sha256=-nRiObtdXDJDadylq3W2wG4-F9BLEsklvF6ueofBddM,20531
 petal_qc/metrology/cold_noise.py,sha256=PuTaQ73WrQCJdE9ezS4UFmA3atwCuvM0ZsUOYu1ZIBw,3106
-petal_qc/metrology/compare_Cores.py,sha256=IKJ7lGHfF2NyYasXqMF-IzBLknA2Qp4qFzBVxJbKOX8,2415
+petal_qc/metrology/compare_Cores.py,sha256=0VLpsxav0TKggkGhbeoyYNMM4hVjEiE-xMOQMRf4oXI,6807
 petal_qc/metrology/comparisonTable.py,sha256=6Zmh-x0ahs28ZJQuHMrIiRcblUmTN1_-1otFSRNMPds,1743
 petal_qc/metrology/convert_mitutoyo.py,sha256=HdXQzFL5y7r8qXDzti91VItDQ-y6D9rEAYknn4yHwBs,5449
-petal_qc/metrology/convert_smartscope.py,sha256=es3PoUd5d5rpHebgwsS9nrc3uuy9uFKOQ00ZdU5XHQ0,3836
-petal_qc/metrology/coreMetrology.py,sha256=L_uoxq8ObmmiMSx41gFCdpQnalR-HgaVUPHzhDYsDiE,13610
+petal_qc/metrology/convert_smartscope.py,sha256=0vAEYn7ec4qTnLfjphj1QA6tK3vZsXyF6nYYj3jE5Yc,6174
+petal_qc/metrology/coreMetrology.py,sha256=t6qsaQA2dbRtzEcqPdlEkxDVgzbUpmDgiASXvVPSzl0,13667
 petal_qc/metrology/data2csv.py,sha256=2ttMSmfGLPIaOqZGima2dH6sdnSRAFTHlEbSOfW5ebA,1809
-petal_qc/metrology/do_Metrology.py,sha256=zPryMgu46fmCyuAGtRGs2yqh0OSxnkSo9bsJMxQ80PU,4107
+petal_qc/metrology/do_Metrology.py,sha256=rp_CfBXBSL30mr6nZdN5UwLqljFcsFzmMLEm0YJLmkg,4293
 petal_qc/metrology/flatness4nigel.py,sha256=SUHwn6pCEUWQV_62-_9-VKrmUdL4gVQcSA3aTtYq958,4071
 petal_qc/metrology/gtkutils.py,sha256=1pOTxiE2EZR9zNNNT5cOetga_4NG9DzLaqQPI4c1EzE,3372
-petal_qc/metrology/petal_flatness.py,sha256=MH3ZlSildLokYnjERQG28qqLg3LL8C6rFLT8VbEI_BA,11190
+petal_qc/metrology/petal_flatness.py,sha256=4fajnx0mhABDn89VFZvzICD6055A2l6BSgaXgb2rTHI,11395
 petal_qc/metrology/show_data_file.py,sha256=yZPcmMy-1EWWySiBBx0hNB3tPVh19bTr0PDaXSyIF4c,4057
 petal_qc/metrology/testSummary.py,sha256=0BhcEd1BPz2Mbonzi8nyZOzNSzpUqowBFNl5cVutqsk,994
 petal_qc/metrology/test_paralelism.py,sha256=_j__OdUwdXWM494_9HpGPuPHixMwwVphCcvHEfzWi_k,1981
+petal_qc/test/prepareDESYfiles.py,sha256=ao5lRnr5SqcBGiFs2F-3YxuLYRdfRRuwUwzKoPWr74k,2978
+petal_qc/test/test_Graphana.py,sha256=fXcqHzgrfZGjSF-WoMLl96G97XjXVnynHYC-5rKw_-c,1032
+petal_qc/test/test_coreThermal.py,sha256=YRPK3DGG7Tz66K4Kka3euXgUDzW_JlIqSYicMBhb96E,1516
 petal_qc/thermal/CSVImage.py,sha256=Vt2kYmUsZWkQvxcF8fDda3HO1Rb29kPQHnEoHFCqWYo,2038
 petal_qc/thermal/DebugPlot.py,sha256=OmREFwNDAKgoObDmcgHrB4d8m3bf2znfsKVGsb5rBGQ,2119
 petal_qc/thermal/IRBFile.py,sha256=yScjQrAeB9dnNNO-6_8S34vzrtme0F6y3kwYahMKDxc,22271
 petal_qc/thermal/IRCore.py,sha256=y79YEQrq4q2hSdmYbOF7jjEA-wy50Qun0g_AmrRUmls,3056
-petal_qc/thermal/IRDataGetter.py,sha256=L7uX6JF0c253bq_NLt7_ddbjnrOCoLDblfIxE_9YL1o,10834
-petal_qc/thermal/IRPetal.py,sha256=8H1ltpahzJavM65De8OTSedvilXQkr3LkV8mRnTDhLQ,38334
+petal_qc/thermal/IRDataGetter.py,sha256=5z9kUo5is-D6Cc2B7w8e588RzhUaRsDRRBRvz9ggqh4,10925
+petal_qc/thermal/IRPetal.py,sha256=5QGGnfxt7QTqEmtqF6o8Kgvtu_FB4wGNH3CVSU4TlIk,38334
 petal_qc/thermal/IRPetalParam.py,sha256=hrQ9FevzWctvBVHeQ71G0WzllVEa5rYkJom2ezfFYHc,3674
 petal_qc/thermal/PetalColorMaps.py,sha256=6CvJHzRdojLHu3BROYSekHw8g_BJ1lJ_edyhovTIydU,3831
 petal_qc/thermal/Petal_IR_Analysis.py,sha256=8Deh_bJ5B7DdaUV18saboF7fXZ_8Bt1vkUlsk5RqVeo,3910
 petal_qc/thermal/PipeFit.py,sha256=bipXxJGxrwlgbrFv8WJA1Ds7Kj4oUwEyqTIswpgni9o,17214
 petal_qc/thermal/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-petal_qc/thermal/analyze_IRCore.py,sha256=lJsADO4ZisESpJLA97MR9oIbdMKzwlZj9vD6WWj64pg,19577
+petal_qc/thermal/analyze_IRCore.py,sha256=482VoSMPi1_GwbdTimYau7VvS8aNb5TwUkKzXbLIg54,20050
 petal_qc/thermal/contours.py,sha256=ampCKm4byZYKb_4eJFjIkdFIl2bqVXD2mV13d2XUWlw,8244
-petal_qc/thermal/coreThermal.py,sha256=veZLvsDXlJdcLz1bFM4Rd9rG2u_UNtpv2l-DirR9Y2M,12765
-petal_qc/thermal/create_IRCore.py,sha256=xLHTyfY0VHHA21ES2b_Ix3JKIyiRQpS1qQBGeLt0Z9Q,7233
-petal_qc/thermal/create_core_report.py,sha256=zCZtTR6ouHRVZQAen_PutCvvDwHE5aSwq95sIv-8htM,4325
+petal_qc/thermal/coreThermal.py,sha256=VNm72f9mqrCrj9FXk8Z9ovNHa8NYYPnk9YahIj_CLcg,12858
+petal_qc/thermal/create_IRCore.py,sha256=mnAmDTF_t3AMOA7Wv19yXT1IX4oFCgfHwHpdnamZvmI,7311
+petal_qc/thermal/create_core_report.py,sha256=01WTPXO3IEjAdazQibCaVN_PTgaExrDgXq2XlMslpoc,4935
 petal_qc/thermal/pipe_back.npz,sha256=yooZuVYtHU541HcV6Gh_5B0BqdYAVEvYAuVvMMSY7Jc,3632
 petal_qc/thermal/pipe_front.npz,sha256=DuwruG9C2Z1rLigqWMApY4Orsf1SGUQGKy0Yan8Bk8A,3697
 petal_qc/thermal/pipe_read.py,sha256=HrAtEbf8pMhJDETzkevodiTbuprIOh4yHv6PzpRoz7Q,5040
 petal_qc/thermal/show_IR_petal.py,sha256=vKb8wm9Y7erAdCb93ODREv2qfSexNMfJpV-67wfOhBw,13159
-petal_qc/thermal/test_Graphana.py,sha256=fXcqHzgrfZGjSF-WoMLl96G97XjXVnynHYC-5rKw_-c,1032
-petal_qc/thermal/test_coreThermal.py,sha256=YRPK3DGG7Tz66K4Kka3euXgUDzW_JlIqSYicMBhb96E,1516
-petal_qc/utils/Geometry.py,sha256=XwA_aojk880N-jC1_bnMYFK0bcD-L96JPS81NUerJf0,19765
+petal_qc/utils/Geometry.py,sha256=zlbMcBdyFvmkSXDJzZ36bXDc-Abagksv6fyEXJ3pHek,19869
 petal_qc/utils/Progress.py,sha256=gCti4n2xfCcOTlAff5GchabGE5BCwavvDZYYKdbEsXU,4064
 petal_qc/utils/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 petal_qc/utils/all_files.py,sha256=4ja_DkbTYPY3gUPBAZq0p7KB9lnXZx-OCnpTHg9tm4I,1044
@@ -53,8 +54,8 @@ petal_qc/utils/docx_utils.py,sha256=Eye16PF8W0mPBVdQvgFKWxPYV7-hzBgANPDZtUEjzf8,
 petal_qc/utils/fit_utils.py,sha256=3KUGWpBMV-bVDkQHWBigXot8chOpjAVBJ5H5b5dbdjk,5349
 petal_qc/utils/readGraphana.py,sha256=Ljr3PSkkTw-A8SRfMa77n7RO7ogLewwDy9dkflzKh2M,1869
 petal_qc/utils/utils.py,sha256=CqCsNIcEg6FQb3DN70tmqeLVLlQqsRfDzhfGevlnfBc,4035
-petal_qc-0.0.3.dist-info/METADATA,sha256=4lvnUeqnwBOTiGqowWZZjowXYKI6Dn_5MD9laVn4Uao,943
-petal_qc-0.0.3.dist-info/WHEEL,sha256=GJ7t_kWBFywbagK5eo9IoUwLW6oyOeTKmQ-9iHFVNxQ,92
-petal_qc-0.0.3.dist-info/entry_points.txt,sha256=tkGC458t1_yVr9OHFE1KtJmGQ2wqsbK8WkPWxru4jFk,127
-petal_qc-0.0.3.dist-info/top_level.txt,sha256=CCo1Xe6kLS79PruhsB6bk2CuL9VFtNdNpgJjYUs4jk4,9
-petal_qc-0.0.3.dist-info/RECORD,,
+petal_qc-0.0.5.dist-info/METADATA,sha256=tU5wxxl2vXtqQq2qjjpCmbq2aVA9-HnCd6bLOVkqatw,943
+petal_qc-0.0.5.dist-info/WHEEL,sha256=Wyh-_nZ0DJYolHNn1_hMa4lM7uDedD_RGVwbmTjyItk,91
+petal_qc-0.0.5.dist-info/entry_points.txt,sha256=D1vXewVYzKMi3qN-SFm2ttq20GLVsxAScU8a3t24Cr0,201
+petal_qc-0.0.5.dist-info/top_level.txt,sha256=CCo1Xe6kLS79PruhsB6bk2CuL9VFtNdNpgJjYUs4jk4,9
+petal_qc-0.0.5.dist-info/RECORD,,

{petal_qc-0.0.3.dist-info → petal_qc-0.0.5.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: bdist_wheel (0.43.0)
+Generator: setuptools (71.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

{petal_qc-0.0.3.dist-info → petal_qc-0.0.5.dist-info}/entry_points.txt

@@ -2,3 +2,5 @@
 bustapeReport = petal_qc:bustapeReport
 coreMetrology = petal_qc:coreMetrology
 coreThermal = petal_qc:coreThermal
+doMetrology = petal_qc:doMetrology
+petalqc_dashBoard = petal_qc:dashBoard