pertpy 0.9.1__py3-none-any.whl → 0.9.3__py3-none-any.whl
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- pertpy/__init__.py +1 -1
- pertpy/tools/__init__.py +6 -4
- {pertpy-0.9.1.dist-info → pertpy-0.9.3.dist-info}/METADATA +3 -3
- {pertpy-0.9.1.dist-info → pertpy-0.9.3.dist-info}/RECORD +6 -6
- {pertpy-0.9.1.dist-info → pertpy-0.9.3.dist-info}/WHEEL +0 -0
- {pertpy-0.9.1.dist-info → pertpy-0.9.3.dist-info}/licenses/LICENSE +0 -0
pertpy/__init__.py
CHANGED
pertpy/tools/__init__.py
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@@ -1,3 +1,4 @@
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from functools import wraps
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from importlib import import_module
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@@ -14,7 +15,11 @@ def lazy_import(module_path, class_name, extras):
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module = import_module(module_path)
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return getattr(module, class_name)
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@wraps(_import)
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def wrapper(*args, **kwargs):
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return _import()(*args, **kwargs)
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return wrapper
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from pertpy.tools._augur import Augur
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@@ -39,8 +44,6 @@ from pertpy.tools._perturbation_space._simple import (
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)
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from pertpy.tools._scgen import Scgen
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# from pertpy.tools._differential_gene_expression import DGEEVAL
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CODA_EXTRAS = ["toytree", "arviz", "ete3"] # also pyqt5 technically
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Sccoda = lazy_import("pertpy.tools._coda._sccoda", "Sccoda", CODA_EXTRAS)
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Tasccoda = lazy_import("pertpy.tools._coda._tasccoda", "Tasccoda", CODA_EXTRAS)
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@@ -76,5 +79,4 @@ __all__ = [
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"KMeansSpace",
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"PseudobulkSpace",
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"Scgen",
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"DGEEVAL",
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]
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.3
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Name: pertpy
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Version: 0.9.
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Version: 0.9.3
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Summary: Perturbation Analysis in the scverse ecosystem.
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Project-URL: Documentation, https://pertpy.readthedocs.io
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Project-URL: Source, https://github.com/scverse/pertpy
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@@ -129,13 +129,13 @@ pip install pertpy
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if you want to use scCODA or tascCODA, please install pertpy as follows:
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```console
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pip install pertpy[coda]
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pip install 'pertpy[coda]'
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```
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If you want to use the differential gene expression interface, please install pertpy by running:
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```console
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pip install pertpy[de]
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pip install 'pertpy[de]'
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```
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## Citation
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pertpy/__init__.py,sha256=
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pertpy/__init__.py,sha256=BDOzyW_PnNzv7Nfa8Skj90mC9T1ILiYtxI_bPXwhc1E,658
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pertpy/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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pertpy/data/__init__.py,sha256=ah3yvoxkgbdMUNAWxS3SyqcUuVamBOSeuWkF2QRAEwM,2703
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pertpy/data/_dataloader.py,sha256=fl16n82nun01gGiP7qhr5sShfcDchp0szzZp7aXkfBI,2495
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@@ -13,7 +13,7 @@ pertpy/metadata/_moa.py,sha256=u_OcMonjOeeoW5P9xOltquVSoTH3Vs80ztHsXf-X1DY,4701
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pertpy/plot/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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pertpy/preprocessing/__init__.py,sha256=VAPFaeq2_qCvdFkQTCj_Hm460HC4Tersu8Rig_tnp_Y,71
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pertpy/preprocessing/_guide_rna.py,sha256=IgKhXEyfRwEA7ccKJNLA_aIxKHm09QJINM09KaIwn68,7644
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pertpy/tools/__init__.py,sha256=
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pertpy/tools/__init__.py,sha256=Zl4W4bWDIIUVRUFDh1qjT14Rg2hjJ6gvRHcupV_sywk,2647
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pertpy/tools/_augur.py,sha256=UWro1nIEZe_rWtjlQCBv4ucqeh3Vt1m8IRzKlux72Z8,55683
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pertpy/tools/_cinemaot.py,sha256=BD_oYC1TktbFMX7fpp0A57QAF6frLEgNQ_2wFUpxjyo,39509
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pertpy/tools/_dialogue.py,sha256=f2fbhKWdm4Co79ZzVgtVq9xYwjYWFLdGNDeGFOO_pfM,51990
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@@ -51,7 +51,7 @@ pertpy/tools/_scgen/_base_components.py,sha256=Qq8myRUm43q9XBrZ9gBggfa2cSV2wbz_K
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pertpy/tools/_scgen/_scgen.py,sha256=HPvFVjY9SS9bGqgTkCDuPYjmA4QHW7rKgHnI2yuI_Q4,30608
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pertpy/tools/_scgen/_scgenvae.py,sha256=v_6tZ4wY-JjdMH1QVd_wG4_N0PoaqB-FM8zC2JsDu1o,3935
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pertpy/tools/_scgen/_utils.py,sha256=1upgOt1FpadfvNG05YpMjYYG-IAlxrC3l_ZxczmIczo,2841
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pertpy-0.9.
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pertpy-0.9.
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pertpy-0.9.
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pertpy-0.9.
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pertpy-0.9.3.dist-info/METADATA,sha256=S6HYSnvP3MYzaICvPCVeFkkOd6HSQU14kMzRTv2RUkI,6852
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pertpy-0.9.3.dist-info/WHEEL,sha256=1yFddiXMmvYK7QYTqtRNtX66WJ0Mz8PYEiEUoOUUxRY,87
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pertpy-0.9.3.dist-info/licenses/LICENSE,sha256=OZ-ZkXM5CmExJiEMM90b_7dGNNvRpj7kdE-49AnrLuI,1070
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pertpy-0.9.3.dist-info/RECORD,,
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File without changes
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File without changes
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