pelagos-decoder 0.1.0__py3-none-any.whl

pelagos_decoder-0.1.0.dist-info/METADATA

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+Metadata-Version: 2.5
+Name: pelagos-decoder
+Version: 0.1.0
+Summary: GPU-accelerated Relay-BP decoder for qLDPC codes, implemented in Triton.
+Project-URL: Homepage, https://github.com/quantum-supercomputing/pelagos
+Project-URL: Documentation, https://github.com/quantum-supercomputing/pelagos/tree/main/tutorials
+Project-URL: Issues, https://github.com/quantum-supercomputing/pelagos/issues
+Project-URL: Changelog, https://github.com/quantum-supercomputing/pelagos/blob/main/CHANGELOG.md
+Project-URL: Paper, https://ieeexplore.ieee.org/document/11662198
+Author: Roman Pletka, Xulong Tang, Yasuko Eckert
+Author-email: Dionysios Diamantopoulos <did@zurich.ibm.com>
+License: Apache-2.0
+License-File: LICENSE
+Keywords: belief propagation,decoder,gpu,ldpc,qec,qldpc,quantum error correction,relay-bp,triton
+Classifier: Intended Audience :: Developers
+Classifier: Intended Audience :: Science/Research
+Classifier: License :: OSI Approved :: Apache Software License
+Classifier: Operating System :: POSIX :: Linux
+Classifier: Programming Language :: Python :: 3 :: Only
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Classifier: Topic :: Scientific/Engineering
+Requires-Python: >=3.11
+Requires-Dist: numpy
+Requires-Dist: scipy
+Provides-Extra: all
+Requires-Dist: beliefmatching; extra == 'all'
+Requires-Dist: jupyterlab; extra == 'all'
+Requires-Dist: matplotlib; extra == 'all'
+Requires-Dist: nvidia-ml-py; extra == 'all'
+Requires-Dist: pandas; extra == 'all'
+Requires-Dist: pytest; extra == 'all'
+Requires-Dist: relay-bp>=0.0.2; extra == 'all'
+Requires-Dist: stim>=1.15; extra == 'all'
+Requires-Dist: torch>=2.12.1; extra == 'all'
+Requires-Dist: triton>=2.0.0; extra == 'all'
+Provides-Extra: bench
+Requires-Dist: pandas; extra == 'bench'
+Provides-Extra: gpu
+Requires-Dist: nvidia-ml-py; extra == 'gpu'
+Requires-Dist: torch>=2.12.1; extra == 'gpu'
+Requires-Dist: triton>=2.0.0; extra == 'gpu'
+Provides-Extra: rust
+Requires-Dist: relay-bp>=0.0.2; extra == 'rust'
+Provides-Extra: stim
+Requires-Dist: beliefmatching; extra == 'stim'
+Requires-Dist: stim>=1.15; extra == 'stim'
+Provides-Extra: test
+Requires-Dist: pytest; extra == 'test'
+Provides-Extra: tutorials
+Requires-Dist: beliefmatching; extra == 'tutorials'
+Requires-Dist: jupyterlab; extra == 'tutorials'
+Requires-Dist: matplotlib; extra == 'tutorials'
+Requires-Dist: nvidia-ml-py; extra == 'tutorials'
+Requires-Dist: stim>=1.15; extra == 'tutorials'
+Requires-Dist: torch>=2.12.1; extra == 'tutorials'
+Requires-Dist: triton>=2.0.0; extra == 'tutorials'
+Description-Content-Type: text/markdown
+
+<!-- Modified 2026 by AMD to document process-per-GPU execution. -->
+<!-- Modified 2026 by AMD to link the multi-GPU tutorial. -->
+
+<p align="center">
+  <picture>
+    <source media="(prefers-color-scheme: dark)" srcset="docs/logo-dark.svg">
+    <img src="docs/logo-light.svg" alt="Pelagos" width="140" height="140">
+  </picture>
+</p>
+
+<h1 align="center">Pelagos</h1>
+
+<p align="center">
+  GPU-accelerated <strong>Relay-BP</strong> decoder for qLDPC codes,
+  implemented in <a href="https://github.com/triton-lang/triton">Triton</a>.
+</p>
+
+<p align="center">
+  <a href="https://github.com/quantum-supercomputing/pelagos/actions/workflows/ci.yml"><img alt="CI" src="https://github.com/quantum-supercomputing/pelagos/actions/workflows/ci.yml/badge.svg?branch=main"></a>
+  <a href="LICENSE"><img alt="License: Apache 2.0" src="https://img.shields.io/badge/license-Apache_2.0-blue.svg"></a>
+  <img alt="Python 3.11 | 3.12 | 3.13" src="https://img.shields.io/badge/python-3.11_|_3.12_|_3.13-3776AB?logo=python&logoColor=white">
+  <a href="https://ieeexplore.ieee.org/document/11662198"><img alt="Paper: IEEE QSW 2026" src="https://img.shields.io/badge/paper-IEEE_QSW_2026-00629B?logo=ieee&logoColor=white"></a>
+</p>
+
+<p align="center">
+  <a href="https://github.com/triton-lang/triton"><img alt="Triton" src="https://img.shields.io/badge/kernels-Triton-6E4AFF"></a>
+  <a href="https://pytorch.org"><img alt="PyTorch" src="https://img.shields.io/badge/PyTorch-EE4C2C?logo=pytorch&logoColor=white"></a>
+  <img alt="AMD ROCm" src="https://img.shields.io/badge/AMD-ROCm-ED1C24?logo=amd&logoColor=white">
+  <img alt="NVIDIA CUDA" src="https://img.shields.io/badge/NVIDIA-CUDA-76B900?logo=nvidia&logoColor=white">
+  <a href="https://github.com/quantumlib/Stim"><img alt="stim" src="https://img.shields.io/badge/noise_models-stim-4285F4"></a>
+  <a href="tutorials/"><img alt="Tutorials: Jupyter" src="https://img.shields.io/badge/tutorials-Jupyter-F37626?logo=jupyter&logoColor=white"></a>
+</p>
+
+Pelagos implements min-sum belief propagation with disordered memory
+strengths (Relay-BP-S), batched across syndromes and executed as fused
+Triton kernels. It is interface-compatible with (and cross-validated
+against) the `relay-bp` Rust reference implementation, available on PyPI.
+
+## Hardware support
+
+Pelagos is vendor-neutral: the kernels are written in Triton, which targets
+both NVIDIA (CUDA), AMD (ROCm/HIP) and Intel (SPIR-V) GPUs. The decoder 
+detects the active backend at construction time and adapts launch parameters 
+accordingly.
+
+## Install
+
+```bash
+pip install pelagos-decoder[gpu]           # decoder + torch/triton
+pip install pelagos-decoder[gpu,rust]      # + the Rust CPU reference, side by side
+pip install pelagos-decoder[gpu,stim]      # + stim / DEM support
+```
+
+Development uses [uv](https://docs.astral.sh/uv/):
+
+```bash
+uv sync --extra all
+uv run pytest
+```
+
+A GPU is required to decode; there is no CPU fallback (see
+[Known limitations](#known-limitations)). The package imports and its
+structural tests run anywhere.
+
+## Quickstart
+
+```python
+import numpy as np
+import torch
+from scipy.sparse import csr_matrix
+from pelagos import RelayBPDecoder
+
+# A tiny code: 3 checks over 3 variables.
+H = csr_matrix(np.array([[1, 1, 0],
+                          [0, 1, 1],
+                          [1, 0, 1]], dtype=np.uint8))
+priors = np.full(3, 0.05)
+
+decoder = RelayBPDecoder(
+    H_csr=H,
+    error_priors=priors,
+    pre_iter=80,          # T0: ordered-memory iterations
+    num_sets=100,         # R: relay legs
+    set_max_iter=60,      # Tr: iterations per leg
+    gamma0=0.65,          # ordered memory strength
+    gamma_dist_interval=(-0.24, 0.66),
+    stop_nconv=5,         # stop after 5 valid solutions
+    data_type="float32",
+    algo="relay",         # required: "relay" or "plain"
+)
+
+# decode() takes a torch GPU tensor, not a numpy array.
+syndrome = np.array([[1, 0, 1]], dtype=np.uint8)
+syndrome_gpu = torch.from_numpy(syndrome).to("cuda:0")
+result = decoder.decode(syndrome_gpu)
+
+# The decoded error pattern is under the "errors" key.
+e_hat = result["errors"].cpu().numpy()
+print(e_hat)
+```
+
+Three details that are easy to get wrong (all enforced by
+`tests/test_smoke.py`):
+
+- `algo` must be passed explicitly — `algo="relay"` or `algo="plain"`.
+  Omitting it raises `ValueError: Unknown algo 'None'`.
+- `decode()` requires a torch tensor already on the GPU
+  (`torch.from_numpy(...).to("cuda:0")` — PyTorch uses the `"cuda"` device
+  type for ROCm builds as well, so the same call works on AMD),
+  not a numpy array.
+- The result dict's error-pattern key is `"errors"`, not `"e_hat"`.
+
+### From a stim detector error model
+
+```python
+import stim
+from pelagos.stim.sinter.check_matrices import CheckMatrices
+from pelagos import RelayBPDecoder
+
+dem = stim.Circuit.generated(
+    "surface_code:rotated_memory_x", distance=3, rounds=3,
+    after_clifford_depolarization=0.001,
+).detector_error_model(decompose_errors=False)
+
+cm = CheckMatrices.from_dem(dem)
+decoder = RelayBPDecoder(H_csr=cm.check_matrix, error_priors=cm.error_priors, algo="relay")
+```
+
+Note the field is `cm.error_priors`, not `cm.priors`. This path requires
+the `stim` extra (`pip install pelagos-decoder[stim]`), which pulls in
+`beliefmatching`.
+
+## Tutorials
+
+Step-by-step Jupyter notebooks live in [`tutorials/`](tutorials/). Start with
+[Tutorial 1: single-GPU quickstart](tutorials/01_single_gpu_quickstart.ipynb). It goes
+from a stim circuit to a logical error rate on the [[72,12,6]] bivariate bicycle code,
+compares plain BP with Relay-BP, and measures throughput:
+
+```bash
+uv sync --extra tutorials            # or: pip install -e ".[tutorials]"
+uv run jupyter lab tutorials/
+```
+
+Continue with [Tutorial 2: multi-GPU quickstart](tutorials/02_multi_gpu_quickstart.ipynb)
+to decode on up to eight GPUs using the process backend, check decoding
+quality, and compare GPU counts with 1,024 shots per GPU.
+
+## Benchmarking
+
+`pelagos_benchmark.py` is a full-featured benchmark CLI. Run
+`python pelagos_benchmark.py --help` for the complete flag list; the
+important ones are `--backend {rust,triton}`, `--circuit`, `--basis`,
+`--distance`, `--rounds`, `--error-rate`, `--data-type`, and `--gpus`. It
+needs `pandas`, which ships in the `bench` extra:
+
+```bash
+pip install "pelagos-decoder[gpu,bench]"     # or: uv sync --extra gpu --extra bench
+```
+
+```bash
+python pelagos_benchmark.py --backend triton \
+    --circuit bicycle_bivariate_144_12_12_memory_X --basis x \
+    --distance 12 --rounds 12 --error-rate 0.003 --data-type float32
+```
+
+There is no single `--compare-rust` flag; to cross-check against the Rust
+reference, run the same command twice with `--backend rust` and
+`--backend triton` (the `rust` extra must be installed for the former).
+
+## Included circuits
+
+`tests/testdata/bicycle_bivariate/` ships gzipped stim circuits for the
+bivariate bicycle codes [[18,4,3]], [[72,12,6]], [[144,12,12]], and
+[[288,12,18]], in `X` and `choi_XZ` bases, at physical error rates 0.002,
+0.003, and 0.005 (24 files, 2.4 MB total).
+
+`stim.Circuit.from_file` does not transparently decompress gzip, so the
+bundled loader in `tests/testdata/circuits.py` handles both forms:
+
+```python
+import sys; sys.path.insert(0, "tests")
+from testdata import get_test_circuit
+
+circuit = get_test_circuit(
+    "bicycle_bivariate_144_12_12_memory_X", 0.003, distance=12, rounds=12
+)
+dem = circuit.detector_error_model(decompose_errors=False)
+```
+
+## Testing
+
+Continuous integration runs on GitHub-hosted runners, which have **no GPU**. On every pull
+request, CI checks packaging, imports, lint (syntax errors and undefined names), the
+CPU-side code (input validation, bit packing, the conversion from a stim DEM to check
+matrices) and the well-formedness of the tutorial notebooks. The decoder tests, including
+the bit-exact comparison against the Rust reference, **are skipped in CI**.
+
+Before each release, and for any pull request that touches the kernels or the decoder, a
+maintainer runs the full suite on a GPU:
+
+```bash
+uv sync --extra gpu --extra rust --extra stim --extra test
+uv run pytest tests/ -v -rs          # nothing should be reported as skipped
+```
+
+## Known limitations
+
+- **A GPU is required.** There is no CPU fallback; use the Rust
+  implementation (`relay-bp` on PyPI) for CPU decoding.
+- **Multi-GPU support is limited to one node.** The default multi-device path
+  (`device=[0, 1, ...]`, `--gpus`) runs one thread per GPU in a single process and
+  does not scale linearly with the number of GPUs. The opt-in
+  [process-per-GPU backend](docs/process-backend.md) runs one worker process per GPU
+  instead; its smoke test checks results against the single-GPU decoder on two GPUs.
+  Scaling across nodes is not supported.
+
+## Contributing
+
+Contributions are welcome! See [CONTRIBUTING.md](CONTRIBUTING.md) for the development setup,
+testing, and sign-off requirements. Everyone taking part is expected to follow the
+[Code of Conduct](CODE_OF_CONDUCT.md). Please report security issues privately, as described in
+[SECURITY.md](SECURITY.md). Release notes are in [CHANGELOG.md](CHANGELOG.md).
+
+## Governance
+
+Pelagos is maintained by contributors from IBM and AMD under a lightweight,
+maintainer-led model. See [GOVERNANCE.md](GOVERNANCE.md) for how decisions are made and
+[MAINTAINERS.md](MAINTAINERS.md) for the current maintainers.
+
+## Citation
+
+If you use Pelagos in your research, please cite:
+
+> D. Diamantopoulos, L. von Niederhäusern, A. S. Anghel, A. Kayi, R. Pletka, T. Müller,
+> N. Papandreou, J. Blanusa, S. Sarafijanovic, N. M. Gonzalez, F. Abel, C. Hagleitner,
+> S. Seelam, B. Johnson, R. Haas, and H. Pozidis, "Pêlagos: An Adaptive GPU Decoder for
+> Error Correction Simulations of Quantum LDPC Codes," in *2026 IEEE International
+> Conference on Quantum Software (QSW)*, 2026, pp. 152–165.
+> [IEEE Xplore](https://ieeexplore.ieee.org/document/11662198)
+
+```bibtex
+@INPROCEEDINGS{11662198,
+  author={Diamantopoulos, Dionysios and von Niederhäusern, Luc and Anghel, Andreea Simona and Pletka, Roman and Kayi, Apo and Müller, Tristan and Papandreou, Nikolaos and Blanusa, Jovan and Sarafijanovic, Slavisa and Gonzalez, Nelson Mimura and Abel, Francois and Hagleitner, Christoph and Seelam, Seetharami and Johnson, Blake and Haas, Robert and Pozidis, Haralampos},
+  booktitle={2026 IEEE International Conference on Quantum Software (QSW)},
+  title={Pêlαγos: An Adaptive GPU Decoder for Error Correction Simulations of Quantum LDPC Codes},
+  year={2026},
+  pages={152-165},
+  doi={10.1109/QSW72780.2026.00025}}
+
+```
+
+## License
+
+Pelagos is jointly owned by IBM and AMD.
+
+Licensed under the Apache License, Version 2.0. See [LICENSE](LICENSE).

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pelagos_decoder-0.1.0.dist-info/licenses/LICENSE

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