pathling 9.6.0.dev0__py3-none-any.whl → 9.7.0.dev0__py3-none-any.whl

pathling/__init__.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from .coding import Coding
 from .context import PathlingContext, StorageType

pathling/_version.py

@@ -2,8 +2,8 @@
 # Auto generated from POM project version.
 # Please do not modify.
 #
-__version__="9.6.0.dev0"
-__java_version__="9.6.0-SNAPSHOT"
+__version__="9.7.0.dev0"
+__java_version__="9.7.0-SNAPSHOT"
 __scala_version__="2.13"
 __delta_version__="4.0.0"
 __hadoop_version__="3.4.1"

pathling/bulk.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from dataclasses import dataclass
 from datetime import datetime, timezone

pathling/coding.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from typing import Optional
 

pathling/context.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 # noinspection PyPackageRequirements
 

pathling/core.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from typing import Any, Callable, Optional, Sequence, Tuple, Union
 

pathling/datasink.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from dataclasses import dataclass
 from typing import TYPE_CHECKING, Callable, List, Optional

pathling/datasource.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from datetime import datetime
 from json import dumps, loads

pathling/fhir.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 
 class MimeType:

pathling/functions.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import urllib.parse
 from typing import Optional

pathling/spark.py

@@ -1,18 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
-
 
 import uuid
 

pathling/udfs.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 from typing import Any, Collection, Optional, Union
 

{pathling-9.6.0.dev0.data → pathling-9.7.0.dev0.data}/data/share/pathling/examples/bulk.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import os
 import tempfile

pathling-9.7.0.dev0.data/data/share/pathling/examples/designation.py

@@ -0,0 +1,40 @@
+#
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+import os
+
+from pathling import Coding, PathlingContext, designation, to_snomed_coding
+
+HERE = os.path.abspath(os.path.dirname(__file__))
+
+pc = PathlingContext.create()
+
+csv = pc.spark.read.options(header=True).csv(
+    f"file://{os.path.join(HERE, 'data/csv/conditions.csv')}"
+)
+
+# Obtain display name for snomed codes
+
+SNOMED_FULLY_SPECIFIED_NAME = Coding.of_snomed("900000000000003001")
+
+result = csv.withColumn(
+    "FULL_NAME",
+    designation(to_snomed_coding(csv.CODE), SNOMED_FULLY_SPECIFIED_NAME, "en").getItem(
+        0
+    ),
+)
+result.select("CODE", "DESCRIPTION", "FULL_NAME").show()

pathling-9.7.0.dev0.data/data/share/pathling/examples/display.py

@@ -0,0 +1,32 @@
+#
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+import os
+
+from pathling import PathlingContext, display, to_snomed_coding
+
+HERE = os.path.abspath(os.path.dirname(__file__))
+
+pc = PathlingContext.create()
+
+csv = pc.spark.read.options(header=True).csv(
+    f"file://{os.path.join(HERE, 'data/csv/conditions.csv')}"
+)
+
+# Obtain display name for snomed codes
+result = csv.withColumn("DISPLAY_NAME", display(to_snomed_coding(csv.CODE)))
+result.select("CODE", "DESCRIPTION", "DISPLAY_NAME").show()

pathling-9.7.0.dev0.data/data/share/pathling/examples/encode_bundles.py

@@ -0,0 +1,37 @@
+#
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+import os
+
+from pathling import PathlingContext
+
+HERE = os.path.abspath(os.path.dirname(__file__))
+
+pc = PathlingContext.create()
+
+# Read each Bundle into a row within a Spark data set.
+bundles_dir = os.path.join(HERE, "data/bundles/")
+bundles = pc.spark.read.text(bundles_dir, wholetext=True)
+
+# Convert the data set of strings into a structured FHIR data set.
+patients = pc.encode_bundle(bundles, "Patient")
+
+# JSON is the default format, XML Bundles can be encoded using input type.
+# patients = pc.encodeBundle(bundles, 'Patient', inputType=MimeType.FHIR_XML)
+
+# Do some stuff.
+patients.select("id", "gender", "birthDate").show()

pathling-9.7.0.dev0.data/data/share/pathling/examples/encode_resources.py

@@ -0,0 +1,34 @@
+#
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+import os
+
+from pathling import PathlingContext
+
+HERE = os.path.abspath(os.path.dirname(__file__))
+
+pc = PathlingContext.create()
+
+# Read each line from the NDJSON into a row within a Spark data set.
+ndjson_dir = os.path.join(HERE, "data/resources/")
+json_resources = pc.spark.read.text(ndjson_dir)
+
+# Convert the data set of strings into a structured FHIR data set.
+patients = pc.encode(json_resources, "Patient")
+
+# Do some stuff.
+patients.select("id", "gender", "birthDate").show()

pathling-9.7.0.dev0.data/data/share/pathling/examples/fhir_search.py

@@ -0,0 +1,32 @@
+#
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+import os
+
+from pathling import PathlingContext
+
+HERE = os.path.abspath(os.path.dirname(__file__))
+DATA_DIR = os.path.join(HERE, "data")
+NDJSON_DIR = os.path.join(DATA_DIR, "resources")
+
+pc = PathlingContext.create()
+datasource = pc.read.ndjson(NDJSON_DIR)
+
+search_filter = pc.search_to_column("Patient", "gender=male&family=MacGyver")
+datasource.read("Patient").filter(search_filter).select(
+    "id", "gender", "name.family"
+).show()

{pathling-9.6.0.dev0.data → pathling-9.7.0.dev0.data}/data/share/pathling/examples/fhir_view.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import os
 

{pathling-9.6.0.dev0.data → pathling-9.7.0.dev0.data}/data/share/pathling/examples/member_of.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import os
 

{pathling-9.6.0.dev0.data → pathling-9.7.0.dev0.data}/data/share/pathling/examples/property_of.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import os
 

{pathling-9.6.0.dev0.data → pathling-9.7.0.dev0.data}/data/share/pathling/examples/subsumes.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import os
 

{pathling-9.6.0.dev0.data → pathling-9.7.0.dev0.data}/data/share/pathling/examples/translate.py

@@ -1,17 +1,19 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
 #
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
+# Copyright © 2018-2026 Commonwealth Scientific and Industrial Research
+# Organisation (CSIRO) ABN 41 687 119 230.
 #
-#      http://www.apache.org/licenses/LICENSE-2.0
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
 #
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
 
 import os
 

{pathling-9.6.0.dev0.dist-info → pathling-9.7.0.dev0.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: pathling
-Version: 9.6.0.dev0
+Version: 9.7.0.dev0
 Summary: Python API for Pathling
 Project-URL: Homepage, https://github.com/aehrc/pathling
 Author-email: "Australian e-Health Research Centre, CSIRO" <pathling@csiro.au>

pathling-9.7.0.dev0.dist-info/RECORD

@@ -0,0 +1,32 @@
+pathling/__init__.py,sha256=4zBdn3eV3qbfpE3mGyB1saKSook5YY_xF6lbmP566Zs,1520
+pathling/_version.py,sha256=r-yjX1HnSvkUYHUaXCFfCts_IdhRAJOzVkbpBpjqmLc,208
+pathling/bulk.py,sha256=epKxz2fzJKZS2kJRQpaZ-QVMeZfCgfi5CKJV2KBjFE4,13829
+pathling/coding.py,sha256=W-O8XhRLEiO4RsCrUvVr_AfCHjpAtRtQ4ZIDQmr65Go,3135
+pathling/context.py,sha256=xylI5KkOamSYbi0lb9CvVO2Z37tiVYGFc5a6fQpQN8A,23664
+pathling/core.py,sha256=7L0_JIhq7kWj2Y0kCZUp9Jn5RDauBLdNIGH0nlvTcs4,7586
+pathling/datasink.py,sha256=NijQCojOFfIT40kkjR6t_lvniJJ7xqLJsORkDTD5mdA,6520
+pathling/datasource.py,sha256=wwWfSuo96u0HDbhAqhtaA55CSR1kX1knH4lt4XoPeIU,14267
+pathling/fhir.py,sha256=GxbpeCP75275bumdwRFmZVbEcxrBV0nV_vcwXo_2Zv8,919
+pathling/functions.py,sha256=_MUwZ6EJ8EztqXRjOQSjZhKgVMeq1Blm-NJ_880jR00,3201
+pathling/spark.py,sha256=F5tYizb0qQNXXHwtUTr_lPTViJyHzSUEYvy2mJeVnmE,3809
+pathling/udfs.py,sha256=-TscOZjEgkwijFmjAo4xyYJ1iheAZPBU9qfsUb6UQdE,9687
+pathling-9.7.0.dev0.data/data/share/pathling/examples/bulk.py,sha256=t3GCJNu5JxBdTIe1FHQDBTcJOMVUNb63bBRdk7FcLVU,9561
+pathling-9.7.0.dev0.data/data/share/pathling/examples/designation.py,sha256=XeWev3hpnFjSWZraNQxUNHPLFNHVjcHWYvG8CTk1QoY,1264
+pathling-9.7.0.dev0.data/data/share/pathling/examples/display.py,sha256=l4KHBKPHHSz3MlJJg1tyMbyD-sRvtb28eviC2L5zIfY,1112
+pathling-9.7.0.dev0.data/data/share/pathling/examples/encode_bundles.py,sha256=uLpiwIJ9Q_oys8nAm40mkE5ZmMeNCURZKqwQ_5pJMgE,1301
+pathling-9.7.0.dev0.data/data/share/pathling/examples/encode_resources.py,sha256=7oKFsNUc_dRd508wtx2MMqXQ2E4OKniOuU0BBQGxg5I,1152
+pathling-9.7.0.dev0.data/data/share/pathling/examples/fhir_search.py,sha256=TDiODXnhaYZwl5A220-0BuN1xgOtxILgWj0kO1DiTBw,1103
+pathling-9.7.0.dev0.data/data/share/pathling/examples/fhir_view.py,sha256=OXesHnavozrAfkvozrN166vWVbZRZKnRisVYlLA0V-o,1863
+pathling-9.7.0.dev0.data/data/share/pathling/examples/member_of.py,sha256=r2JvCVdoBQIIfy9N8Sn0XZyT1XW8598AaDF97hRHsVQ,1607
+pathling-9.7.0.dev0.data/data/share/pathling/examples/property_of.py,sha256=OkTcayxFyG-xTM2-7cKD19lhGU1da9ROJ6SxTa6y5DQ,1500
+pathling-9.7.0.dev0.data/data/share/pathling/examples/subsumes.py,sha256=1MjFCzE4kfMU5-w5vhrG-eaWY51A-A8PNhtqfAf3ANI,1689
+pathling-9.7.0.dev0.data/data/share/pathling/examples/translate.py,sha256=UIBoajcyV75zTCGckA11bbr-Lnrn4BJ4-FgQmAJXUVA,1348
+pathling-9.7.0.dev0.data/data/share/pathling/examples/data/bundles/Bennett146_Swaniawski813_704c9750-f6e6-473b-ee83-fbd48e07fe3f.json,sha256=LOTPodITfN-U27CwII1ctTjRwNoteL9kHnBR8XKccg0,86431
+pathling-9.7.0.dev0.data/data/share/pathling/examples/data/bundles/Dino214_Parisian75_40d82b80-b682-cd8b-da6d-396809878641.json,sha256=rtid-iALtd9hnXHRkqlaG9pApzg2j9_iYWOOdePUqFM,66676
+pathling-9.7.0.dev0.data/data/share/pathling/examples/data/csv/conditions.csv,sha256=nY9kOVIRcdhWHDT0YRXw_GmQLnUg4p97cVPsUdZgYSI,2452
+pathling-9.7.0.dev0.data/data/share/pathling/examples/data/resources/Condition.ndjson,sha256=Qczj6C7Bjl6k_mGn5suIerTcXDSoNASSYB1vkrTHZKQ,18048
+pathling-9.7.0.dev0.data/data/share/pathling/examples/data/resources/Patient.ndjson,sha256=4v8dp9XGhpoCVl32YqYQwjZ0_TuklGuACy0TOskP_j8,29641
+pathling-9.7.0.dev0.dist-info/METADATA,sha256=pWMx5kgna2g0BGm2tVPTK1-DfSzLQDxhF28p5RdVzS0,14681
+pathling-9.7.0.dev0.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
+pathling-9.7.0.dev0.dist-info/licenses/LICENSE,sha256=F5VycCoNECCJmuHJhj_srdpUfu60QTDoh0VTNyJYPoQ,15244
+pathling-9.7.0.dev0.dist-info/RECORD,,

pathling-9.6.0.dev0.data/data/share/pathling/examples/designation.py

@@ -1,38 +0,0 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
-#
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
-
-import os
-
-from pathling import Coding, PathlingContext, designation, to_snomed_coding
-
-HERE = os.path.abspath(os.path.dirname(__file__))
-
-pc = PathlingContext.create()
-
-csv = pc.spark.read.options(header=True).csv(
-    f"file://{os.path.join(HERE, 'data/csv/conditions.csv')}"
-)
-
-# Obtain display name for snomed codes
-
-SNOMED_FULLY_SPECIFIED_NAME = Coding.of_snomed("900000000000003001")
-
-result = csv.withColumn(
-    "FULL_NAME",
-    designation(to_snomed_coding(csv.CODE), SNOMED_FULLY_SPECIFIED_NAME, "en").getItem(
-        0
-    ),
-)
-result.select("CODE", "DESCRIPTION", "FULL_NAME").show()

pathling-9.6.0.dev0.data/data/share/pathling/examples/display.py

@@ -1,30 +0,0 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
-#
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
-
-import os
-
-from pathling import PathlingContext, display, to_snomed_coding
-
-HERE = os.path.abspath(os.path.dirname(__file__))
-
-pc = PathlingContext.create()
-
-csv = pc.spark.read.options(header=True).csv(
-    f"file://{os.path.join(HERE, 'data/csv/conditions.csv')}"
-)
-
-# Obtain display name for snomed codes
-result = csv.withColumn("DISPLAY_NAME", display(to_snomed_coding(csv.CODE)))
-result.select("CODE", "DESCRIPTION", "DISPLAY_NAME").show()

pathling-9.6.0.dev0.data/data/share/pathling/examples/encode_bundles.py

@@ -1,35 +0,0 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
-#
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
-
-import os
-
-from pathling import PathlingContext
-
-HERE = os.path.abspath(os.path.dirname(__file__))
-
-pc = PathlingContext.create()
-
-# Read each Bundle into a row within a Spark data set.
-bundles_dir = os.path.join(HERE, "data/bundles/")
-bundles = pc.spark.read.text(bundles_dir, wholetext=True)
-
-# Convert the data set of strings into a structured FHIR data set.
-patients = pc.encode_bundle(bundles, "Patient")
-
-# JSON is the default format, XML Bundles can be encoded using input type.
-# patients = pc.encodeBundle(bundles, 'Patient', inputType=MimeType.FHIR_XML)
-
-# Do some stuff.
-patients.select("id", "gender", "birthDate").show()

pathling-9.6.0.dev0.data/data/share/pathling/examples/encode_resources.py

@@ -1,32 +0,0 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
-#
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
-
-import os
-
-from pathling import PathlingContext
-
-HERE = os.path.abspath(os.path.dirname(__file__))
-
-pc = PathlingContext.create()
-
-# Read each line from the NDJSON into a row within a Spark data set.
-ndjson_dir = os.path.join(HERE, "data/resources/")
-json_resources = pc.spark.read.text(ndjson_dir)
-
-# Convert the data set of strings into a structured FHIR data set.
-patients = pc.encode(json_resources, "Patient")
-
-# Do some stuff.
-patients.select("id", "gender", "birthDate").show()

pathling-9.6.0.dev0.data/data/share/pathling/examples/fhir_search.py

@@ -1,30 +0,0 @@
-#  Copyright © 2018-2025 Commonwealth Scientific and Industrial Research
-#  Organisation (CSIRO) ABN 41 687 119 230.
-#
-#  Licensed under the Apache License, Version 2.0 (the "License");
-#  you may not use this file except in compliance with the License.
-#  You may obtain a copy of the License at
-#
-#      http://www.apache.org/licenses/LICENSE-2.0
-#
-#  Unless required by applicable law or agreed to in writing, software
-#  distributed under the License is distributed on an "AS IS" BASIS,
-#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-#  See the License for the specific language governing permissions and
-#  limitations under the License.
-
-import os
-
-from pathling import PathlingContext
-
-HERE = os.path.abspath(os.path.dirname(__file__))
-DATA_DIR = os.path.join(HERE, "data")
-NDJSON_DIR = os.path.join(DATA_DIR, "resources")
-
-pc = PathlingContext.create()
-datasource = pc.read.ndjson(NDJSON_DIR)
-
-search_filter = pc.search_to_column("Patient", "gender=male&family=MacGyver")
-datasource.read("Patient").filter(search_filter).select(
-    "id", "gender", "name.family"
-).show()

pathling-9.6.0.dev0.dist-info/RECORD

@@ -1,32 +0,0 @@
-pathling/__init__.py,sha256=9bUYjEm0Thx0lTyaNZ4TJyXS6Q9xcZAcPDSDAudRNIk,1527
-pathling/_version.py,sha256=5XoAFlYD_zgKqG-xGbCdJ_ZNsPEfxHSdBDQU7pLmcsQ,208
-pathling/bulk.py,sha256=T_MldloapsT7CeV_IjCO2wPfY5O8rdISapSue3C1S-Y,13836
-pathling/coding.py,sha256=cJNJP48OYI-J7Y96T73MoSax515lYluN7tTc_jpJTTw,3142
-pathling/context.py,sha256=ArRu6YQryeCDTa3ORfS4LD4qJPN8AKPtHYFVm5X3XZI,23671
-pathling/core.py,sha256=NRr6L7zkECeQYYXGa4wf7esorsZIqmrsLBltD0iwuno,7593
-pathling/datasink.py,sha256=BIQSMFthlCeh6XR034r8InHkNiz4btDF88ZCvkiEZcE,6527
-pathling/datasource.py,sha256=a9HssDcBlHqXD7cMUJzJA8-JYmzXicCB8X3rtp5PVQU,14274
-pathling/fhir.py,sha256=Y4UFClPf_7lVozisJEVApmgPt5id01xkNUb1CQPCunc,926
-pathling/functions.py,sha256=ANIsyeC2NONZjARA-EnGOSaKqDA7MHjHoLjigkq1V68,3208
-pathling/spark.py,sha256=yadQeCzHLnYvvg8URCnyZm6FY9LvNePV6FptKtLlCb0,3817
-pathling/udfs.py,sha256=g3MQDzxKh9L6B0hMPYsUs3QLmzMXrlVFzDr0c1L_z-U,9694
-pathling-9.6.0.dev0.data/data/share/pathling/examples/bulk.py,sha256=H_0lcKfbnk7-ZSD91qYb1qE5_ujqJhbSXAlN2k63xY0,9568
-pathling-9.6.0.dev0.data/data/share/pathling/examples/designation.py,sha256=pO08B05s58ojyUqZ6nMsLLlmchHtXhflCJafitJ76Es,1271
-pathling-9.6.0.dev0.data/data/share/pathling/examples/display.py,sha256=fMfBZ7uiQUiVvV14wPl3OAaw4g3q0r1g84OcFPqBMeE,1119
-pathling-9.6.0.dev0.data/data/share/pathling/examples/encode_bundles.py,sha256=IUPw2XyQuUdEvQ42aQCXxlYLN-6Tz4_uLLCtb3cvH88,1308
-pathling-9.6.0.dev0.data/data/share/pathling/examples/encode_resources.py,sha256=orrH7BDoOWqSUUJ8NjuvAquDmeRAzvPh8s8UgWj9YiY,1159
-pathling-9.6.0.dev0.data/data/share/pathling/examples/fhir_search.py,sha256=dkTSXsRftlNsYC3ba8yAQ4DFWCrKdJHTJSGR_aEJexk,1110
-pathling-9.6.0.dev0.data/data/share/pathling/examples/fhir_view.py,sha256=l7KcwuPkErv_avTwfsSCkh0LNhsKk5JPR_BrlhOWzW8,1870
-pathling-9.6.0.dev0.data/data/share/pathling/examples/member_of.py,sha256=vBovX5OgAnea0DxKjPegGmNq7cjXixs2HqJd_fgyyGw,1614
-pathling-9.6.0.dev0.data/data/share/pathling/examples/property_of.py,sha256=bDSziPoY5G9Q7h7VOl3wD5NtwzeDfcWAeZsCaPvxBtM,1507
-pathling-9.6.0.dev0.data/data/share/pathling/examples/subsumes.py,sha256=vICIJsr7e3eAOYJFCG49s9BLkoBU3TJQaNzjvapxHXM,1696
-pathling-9.6.0.dev0.data/data/share/pathling/examples/translate.py,sha256=5wmzs2vvmpCHGTv-GYXNz56NhS5kSueUhDUOKBCTtqU,1355
-pathling-9.6.0.dev0.data/data/share/pathling/examples/data/bundles/Bennett146_Swaniawski813_704c9750-f6e6-473b-ee83-fbd48e07fe3f.json,sha256=LOTPodITfN-U27CwII1ctTjRwNoteL9kHnBR8XKccg0,86431
-pathling-9.6.0.dev0.data/data/share/pathling/examples/data/bundles/Dino214_Parisian75_40d82b80-b682-cd8b-da6d-396809878641.json,sha256=rtid-iALtd9hnXHRkqlaG9pApzg2j9_iYWOOdePUqFM,66676
-pathling-9.6.0.dev0.data/data/share/pathling/examples/data/csv/conditions.csv,sha256=nY9kOVIRcdhWHDT0YRXw_GmQLnUg4p97cVPsUdZgYSI,2452
-pathling-9.6.0.dev0.data/data/share/pathling/examples/data/resources/Condition.ndjson,sha256=Qczj6C7Bjl6k_mGn5suIerTcXDSoNASSYB1vkrTHZKQ,18048
-pathling-9.6.0.dev0.data/data/share/pathling/examples/data/resources/Patient.ndjson,sha256=4v8dp9XGhpoCVl32YqYQwjZ0_TuklGuACy0TOskP_j8,29641
-pathling-9.6.0.dev0.dist-info/METADATA,sha256=Cy-jZWQiP2T4AhygOmUOETkfGqH-AURyzCyxYw4ZK1w,14681
-pathling-9.6.0.dev0.dist-info/WHEEL,sha256=qtCwoSJWgHk21S1Kb4ihdzI2rlJ1ZKaIurTj_ngOhyQ,87
-pathling-9.6.0.dev0.dist-info/licenses/LICENSE,sha256=F5VycCoNECCJmuHJhj_srdpUfu60QTDoh0VTNyJYPoQ,15244
-pathling-9.6.0.dev0.dist-info/RECORD,,