pat2vec 0.1.1__py3-none-any.whl

pat2vec/__init__.py

@@ -0,0 +1,463 @@
+"""
+pat2vec: A package for processing patient data.
+
+This file is auto-generated by `generate_init.py`.
+It exposes the main functions and methods of the pat2vec library for easy access.
+"""
+
+from .main_pat2vec import (
+    main
+)
+from .pat2vec_get_methods.get_method_appointments import (
+    get_appointments, search_appointments
+)
+from .pat2vec_get_methods.get_method_bed import (
+    get_bed, search_bed_data
+)
+from .pat2vec_get_methods.get_method_bloods import (
+    get_current_pat_bloods, search_bloods_data
+)
+from .pat2vec_get_methods.get_method_bmi import (
+    calculate_bmi_features, get_bmi_features, search_bmi_observations
+)
+from .pat2vec_get_methods.get_method_core02 import (
+    calculate_core_o2_features, clean_observation_value, get_core_02,
+    search_core_o2_observations
+)
+from .pat2vec_get_methods.get_method_core_resus import (
+    calculate_core_resus_features, get_core_resus, search_core_resus_observations
+)
+from .pat2vec_get_methods.get_method_current_pat_annotations_mrc_cs import (
+    get_current_pat_annotations_mrc_cs
+)
+from .pat2vec_get_methods.get_method_demo import (
+    get_demographics3, process_demographics_data, search_demographics
+)
+from .pat2vec_get_methods.get_method_demographics import (
+    get_demo, get_demographics3_batch
+)
+from .pat2vec_get_methods.get_method_diagnostics import (
+    calculate_diagnostic_features, create_diagnostic_features_dataframe,
+    get_current_pat_diagnostics, prepare_diagnostic_datetime, search_diagnostic_orders
+)
+from .pat2vec_get_methods.get_method_drugs import (
+    calculate_drug_features, create_drug_features_dataframe, get_current_pat_drugs,
+    prepare_drug_datetime, search_drug_orders
+)
+from .pat2vec_get_methods.get_method_hosp_site import (
+    calculate_hospital_site_features, get_hosp_site, prepare_hospital_site_data,
+    search_hospital_site
+)
+from .pat2vec_get_methods.get_method_news import (
+    compute_feature_stats, get_news
+)
+from .pat2vec_get_methods.get_method_pat_annotations import (
+    get_current_pat_annotations
+)
+from .pat2vec_get_methods.get_method_report_annotations import (
+    get_current_pat_report_annotations
+)
+from .pat2vec_get_methods.get_method_smoking import (
+    calculate_smoking_features, get_smoking, prepare_smoking_data, search_smoking
+)
+from .pat2vec_get_methods.get_method_textual_obs_annotations import (
+    get_current_pat_textual_obs_annotations
+)
+from .pat2vec_get_methods.get_method_vte_status import (
+    calculate_vte_features, get_vte_status, prepare_vte_data, search_vte
+)
+from .pat2vec_main_methods.main_batch import (
+    main_batch
+)
+from .pat2vec_pat_list.get_patient_treatment_list import (
+    analyze_client_codes, extract_treatment_id_list_from_docs, generate_control_list,
+    get_all_patients_list, sanitize_hospital_ids
+)
+from .pat2vec_search.cogstack_search_methods import (
+    CogStack, cohort_searcher_no_terms, cohort_searcher_no_terms_fuzzy,
+    cohort_searcher_with_terms_and_search, cohort_searcher_with_terms_no_search,
+    create_credentials_file, dataframe_generator, initialize_cogstack_client,
+    iterative_multi_term_cohort_searcher_no_terms_fuzzy,
+    iterative_multi_term_cohort_searcher_no_terms_fuzzy_mct,
+    iterative_multi_term_cohort_searcher_no_terms_fuzzy_textual_obs, list_chunker,
+    set_index_safe_wrapper
+)
+from .pat2vec_search.data_helper_functions import (
+    appendAge, appendAgeAtRecord, append_age_at_record_series, df_column_uniquify
+)
+from .pat2vec_search.matcher import (
+    matcher
+)
+from .pat2vec_search.nearest import (
+    nearest
+)
+from .pat2vec_search.search_helper_functions import (
+    bulk_str_extract, bulk_str_extract_round_robin, bulk_str_findall, date_cleaner,
+    pylist2searchlist, stringlist2pylist, stringlist2searchlist, without_keys
+)
+from .pat2vec_search.search_multiprocess import (
+    cohort_searcher_with_terms_and_search_multi, pull_and_write
+)
+from .patvec_get_batch_methods.get_merged_batches import (
+    get_merged_pat_batch_appointments, get_merged_pat_batch_bloods,
+    get_merged_pat_batch_bmi, get_merged_pat_batch_demo,
+    get_merged_pat_batch_diagnostics, get_merged_pat_batch_drugs,
+    get_merged_pat_batch_epr_docs, get_merged_pat_batch_mct_docs,
+    get_merged_pat_batch_news, get_merged_pat_batch_obs, get_merged_pat_batch_reports,
+    get_merged_pat_batch_textual_obs_docs, save_group, split_and_save_csv,
+    verify_split_data_concatenated, verify_split_data_individual
+)
+from .patvec_get_batch_methods.get_prefetch_batches import (
+    BatchConfig, prefetch_batches
+)
+from .patvec_get_batch_methods.main import (
+    get_pat_batch_appointments, get_pat_batch_bloods, get_pat_batch_bmi,
+    get_pat_batch_demo, get_pat_batch_diagnostics, get_pat_batch_drugs,
+    get_pat_batch_epr_docs, get_pat_batch_epr_docs_annotations, get_pat_batch_mct_docs,
+    get_pat_batch_mct_docs_annotations, get_pat_batch_news, get_pat_batch_obs,
+    get_pat_batch_reports, get_pat_batch_reports_docs_annotations,
+    get_pat_batch_textual_obs_annotations, get_pat_batch_textual_obs_docs
+)
+from .tests.test_calculate_interval import (
+    TestCalculateInterval
+)
+from .tests.test_config_class import (
+    TestConfigClass
+)
+from .tests.test_filter_dataframe_by_timestamp_extended import (
+    TestFilterDataFrameByTimestampExtended
+)
+from .tests.test_generate_date_list import (
+    TestGenerateDateList
+)
+from .tests.test_get_dummy_data_cohort_searcher_get_date import (
+    TestCreateRandomDateFromGlobals
+)
+from .tests.test_get_start_end_year_month import (
+    MockConfig, TestGetStartEndYearMonth
+)
+from .tests.test_global_date_validation import (
+    TestGlobalDateValidation
+)
+from .tests.test_individual_patient_window import (
+    TestIndividualPatientWindow
+)
+from .tests.test_methods_annotation_filter_annot_dataframe import (
+    TestFilterAnnotDataframe
+)
+from .tests.test_methods_annotation_multi_annots_to_df import (
+    TestMultiAnnotsToDf
+)
+from .tests.test_methods_get import (
+    TestFilterDataFrameByTimestamp
+)
+from .tests.test_parse_date import (
+    TestDateValidationForElasticsearch
+)
+from .tests.test_post_processing_build_ipw_dataframe import (
+    TestBuildIpwDataframe
+)
+from .tests.test_post_processing_get_pat_ipw_record import (
+    TestGetPatIpwRecord
+)
+from .tests.test_post_processing_process_csv_files import (
+    TestProcessCsvFiles
+)
+from .util.anonymisation_data_methods import (
+    anonymize_feature_names, deanonymize_feature_names
+)
+from .util.anonymisation_deid_documents import (
+    DeIdAnonymizer, anonymize_dataframe_quick, anonymize_single_text
+)
+from .util.calculate_interval import (
+    calculate_interval
+)
+from .util.clinical_note_splitter import (
+    find_date, split_and_append_chunks, split_clinical_notes, split_clinical_notes_mct
+)
+from .util.compile_requirements import (
+    append_to_file, process_requirements, run_pip_compile
+)
+from .util.config_pat2vec import (
+    config_class, update_global_start_date, validate_and_fix_global_dates
+)
+from .util.current_pat_batch_path_methods import (
+    PathsClass
+)
+from .util.elasticsearch_methods import (
+    get_guess_datetime_column, guess_datetime_columns, handle_inconsistent_dtypes,
+    ingest_data_to_elasticsearch
+)
+from .util.ethnicity_abstractor import (
+    EthnicityAbstractor
+)
+from .util.evaluation_methods import (
+    CsvProfiler, compare_ipw_annotation_rows
+)
+from .util.evaluation_methods_ploting import (
+    generate_pie_charts
+)
+from .util.filter_dataframe_by_timestamp import (
+    filter_dataframe_by_timestamp
+)
+from .util.filter_methods import (
+    apply_bloods_data_type_filter, apply_data_type_epr_docs_filters,
+    apply_data_type_mct_docs_filters, filter_dataframe_by_fuzzy_terms
+)
+from .util.generate_date_list import (
+    generate_date_list
+)
+from .util.get_best_gpu import (
+    set_best_gpu
+)
+from .util.get_dummy_data_cohort_searcher import (
+    cohort_searcher_with_terms_and_search_dummy, create_random_date_from_globals,
+    extract_date_range, extract_search_term_obscatalogmasteritem_displayname,
+    generate_appointments_data, generate_basic_observations_data,
+    generate_basic_observations_textual_obs_data, generate_bmi_data,
+    generate_core_o2_data, generate_core_resus_data, generate_diagnostic_orders_data,
+    generate_drug_orders_data, generate_epr_documents_data,
+    generate_epr_documents_personal_data, generate_hospital_site_data,
+    generate_observations_MRC_text_data, generate_observations_Reports_text_data,
+    generate_observations_data, generate_patient_timeline,
+    generate_patient_timeline_faker, generate_uuid, generate_uuid_list,
+    get_patient_timeline_dummy, maybe_nan, run_generate_patient_timeline_and_append
+)
+from .util.get_dummy_data_medcat_annotation import (
+    dummy_CAT, dummy_medcat_annotation_generator, random_sample
+)
+from .util.get_start_end_year_month import (
+    get_start_end_year_month
+)
+from .util.helper_functions import (
+    extract_nhs_numbers, get_search_client_idcode_list_from_nhs_number_list
+)
+from .util.impute_data_for_pipe import (
+    mean_impute_dataframe, save_missing_percentage
+)
+from .util.logger_setup import (
+    setup_logger
+)
+from .util.medcat_misc_methods import (
+    create_ner_results_dataframe, extract_labels_from_medcat_annotation_export,
+    manually_label_annotation_df, medcat_trainer_export_to_df,
+    parse_medcat_trainer_project_json, plot_ner_results, recreate_json
+)
+from .util.methods_annotation import (
+    annot_pat_batch_docs, calculate_pretty_name_count_features,
+    check_pat_document_annotation_complete, multi_annots_to_df_mct,
+    multi_annots_to_df_reports, multi_annots_to_df_textual_obs
+)
+from .util.methods_annotation_filter_annot_dataframe import (
+    filter_annot_dataframe
+)
+from .util.methods_annotation_get_pat_document_annotation_batch import (
+    get_pat_batch_textual_obs_annotation_batch, get_pat_document_annotation_batch,
+    get_pat_document_annotation_batch_mct, get_pat_document_annotation_batch_reports
+)
+from .util.methods_annotation_json_to_dataframe import (
+    json_to_dataframe, parse_meta_anns
+)
+from .util.methods_annotation_multi_annots_to_df import (
+    multi_annots_to_df, temporary_file
+)
+from .util.methods_annotation_regex import (
+    append_regex_term_counts
+)
+from .util.methods_get import (
+    add_offset_column, build_patient_dict, convert_date, convert_timestamp_to_tuple,
+    create_folders, create_folders_annot_csv_wrapper, create_folders_for_pat,
+    create_local_folders, create_remote_folders, dump_results,
+    enum_exact_target_date_vector, enum_target_date_vector, exist_check,
+    filter_stripped_list, get_empty_date_vector, get_free_gpu, list_dir_wrapper,
+    read_csv_wrapper, read_remote, sftp_exists, test_datetime_formats, update_pbar,
+    write_csv_wrapper, write_remote
+)
+from .util.methods_get_medcat import (
+    get_cat
+)
+from .util.methods_post_get import (
+    check_csv_files_in_directory, check_csv_integrity,
+    copy_project_folders_with_substring_match, retrieve_pat_annotations
+)
+from .util.parse_date import (
+    validate_input_dates
+)
+from .util.post_processing import (
+    aggregate_dataframe_mean, check_list_presence, collapse_df_to_mean,
+    convert_true_to_float, copy_files_and_dirs, count_files, drop_columns_with_all_nan,
+    extract_datetime_from_binary_columns,
+    extract_datetime_from_binary_columns_chunk_reader, extract_datetime_to_column,
+    extract_types_from_csv, filter_and_select_rows, filter_and_update_csv,
+    filter_annot_dataframe2, filter_dataframe_by_cui, filter_dataframe_n_lists,
+    get_all_target_annots, impute_dataframe, impute_datetime,
+    join_icd10_OPC4S_codes_to_annot, join_icd10_codes_to_annot, missing_percentage_df,
+    plot_missing_pattern_bloods, process_chunk, produce_filtered_annotation_dataframe,
+    remove_file_from_paths, retrieve_pat_annots_mct_epr, save_missing_values_pickle
+)
+from .util.post_processing_build_ipw_dataframe import (
+    build_ipw_dataframe
+)
+from .util.post_processing_build_methods import (
+    build_merged_bloods, build_merged_epr_mct_annot_df, build_merged_epr_mct_doc_df,
+    filter_annot_dataframe, get_annots_joined_to_docs, join_docs_to_annots,
+    merge_appointments_csv, merge_bmi_csv, merge_demographics_csv,
+    merge_diagnostics_csv, merge_drugs_csv, merge_news_csv, retrieve_pat_bloods,
+    retrieve_pat_docs_mct_epr
+)
+from .util.post_processing_get_pat_ipw_record import (
+    get_pat_ipw_record
+)
+from .util.post_processing_medcat import (
+    coerce_document_df_to_medcat_trainer_input, sample_by_terms
+)
+from .util.post_processing_process_csv_files import (
+    process_csv_files, process_csv_files_multi
+)
+from .util.pre_get_drug_treatment_docs import (
+    get_treatment_records_by_drug_order_name, iterative_drug_treatment_search
+)
+from .util.pre_processing import (
+    calculate_age_append, demo_to_latest, draw_document_samples,
+    get_treatment_docs_by_iterative_multi_term_cohort_searcher_no_terms_fuzzy,
+    search_cohort
+)
+from .util.presentation_methods import (
+    create_powerpoint_from_images, create_powerpoint_from_images_group,
+    create_powerpoint_slides, create_powerpoint_slides_client_idcode_groups,
+    group_images_by_suffix
+)
+from .util.testing_helpers import (
+    read_test_data
+)
+
+
+# Define the public API of the package
+__all__ = [
+    "BatchConfig", "CogStack", "CsvProfiler", "DeIdAnonymizer", "EthnicityAbstractor",
+    "MockConfig", "PathsClass", "TestBuildIpwDataframe", "TestCalculateInterval",
+    "TestConfigClass", "TestCreateRandomDateFromGlobals",
+    "TestDateValidationForElasticsearch", "TestFilterAnnotDataframe",
+    "TestFilterDataFrameByTimestamp", "TestFilterDataFrameByTimestampExtended",
+    "TestGenerateDateList", "TestGetPatIpwRecord", "TestGetStartEndYearMonth",
+    "TestGlobalDateValidation", "TestIndividualPatientWindow", "TestMultiAnnotsToDf",
+    "TestProcessCsvFiles", "add_offset_column", "aggregate_dataframe_mean",
+    "analyze_client_codes", "annot_pat_batch_docs", "anonymize_dataframe_quick",
+    "anonymize_feature_names", "anonymize_single_text", "appendAge",
+    "appendAgeAtRecord", "append_age_at_record_series", "append_regex_term_counts",
+    "append_to_file", "apply_bloods_data_type_filter",
+    "apply_data_type_epr_docs_filters", "apply_data_type_mct_docs_filters",
+    "build_ipw_dataframe", "build_merged_bloods", "build_merged_epr_mct_annot_df",
+    "build_merged_epr_mct_doc_df", "build_patient_dict", "bulk_str_extract",
+    "bulk_str_extract_round_robin", "bulk_str_findall", "calculate_age_append",
+    "calculate_bmi_features", "calculate_core_o2_features",
+    "calculate_core_resus_features", "calculate_diagnostic_features",
+    "calculate_drug_features", "calculate_hospital_site_features", "calculate_interval",
+    "calculate_pretty_name_count_features", "calculate_smoking_features",
+    "calculate_vte_features", "check_csv_files_in_directory", "check_csv_integrity",
+    "check_list_presence", "check_pat_document_annotation_complete",
+    "clean_observation_value", "coerce_document_df_to_medcat_trainer_input",
+    "cohort_searcher_no_terms", "cohort_searcher_no_terms_fuzzy",
+    "cohort_searcher_with_terms_and_search",
+    "cohort_searcher_with_terms_and_search_dummy",
+    "cohort_searcher_with_terms_and_search_multi",
+    "cohort_searcher_with_terms_no_search", "collapse_df_to_mean",
+    "compare_ipw_annotation_rows", "compute_feature_stats", "config_class",
+    "convert_date", "convert_timestamp_to_tuple", "convert_true_to_float",
+    "copy_files_and_dirs", "copy_project_folders_with_substring_match", "count_files",
+    "create_credentials_file", "create_diagnostic_features_dataframe",
+    "create_drug_features_dataframe", "create_folders",
+    "create_folders_annot_csv_wrapper", "create_folders_for_pat",
+    "create_local_folders", "create_ner_results_dataframe",
+    "create_powerpoint_from_images", "create_powerpoint_from_images_group",
+    "create_powerpoint_slides", "create_powerpoint_slides_client_idcode_groups",
+    "create_random_date_from_globals", "create_remote_folders", "dataframe_generator",
+    "date_cleaner", "deanonymize_feature_names", "demo_to_latest", "df_column_uniquify",
+    "draw_document_samples", "drop_columns_with_all_nan", "dummy_CAT",
+    "dummy_medcat_annotation_generator", "dump_results",
+    "enum_exact_target_date_vector", "enum_target_date_vector", "exist_check",
+    "extract_date_range", "extract_datetime_from_binary_columns",
+    "extract_datetime_from_binary_columns_chunk_reader", "extract_datetime_to_column",
+    "extract_labels_from_medcat_annotation_export", "extract_nhs_numbers",
+    "extract_search_term_obscatalogmasteritem_displayname",
+    "extract_treatment_id_list_from_docs", "extract_types_from_csv",
+    "filter_and_select_rows", "filter_and_update_csv", "filter_annot_dataframe",
+    "filter_annot_dataframe2", "filter_dataframe_by_cui",
+    "filter_dataframe_by_fuzzy_terms", "filter_dataframe_by_timestamp",
+    "filter_dataframe_n_lists", "filter_stripped_list", "find_date",
+    "generate_appointments_data", "generate_basic_observations_data",
+    "generate_basic_observations_textual_obs_data", "generate_bmi_data",
+    "generate_control_list", "generate_core_o2_data", "generate_core_resus_data",
+    "generate_date_list", "generate_diagnostic_orders_data",
+    "generate_drug_orders_data", "generate_epr_documents_data",
+    "generate_epr_documents_personal_data", "generate_hospital_site_data",
+    "generate_observations_MRC_text_data", "generate_observations_Reports_text_data",
+    "generate_observations_data", "generate_patient_timeline",
+    "generate_patient_timeline_faker", "generate_pie_charts", "generate_uuid",
+    "generate_uuid_list", "get_all_patients_list", "get_all_target_annots",
+    "get_annots_joined_to_docs", "get_appointments", "get_bed", "get_bmi_features",
+    "get_cat", "get_core_02", "get_core_resus", "get_current_pat_annotations",
+    "get_current_pat_annotations_mrc_cs", "get_current_pat_bloods",
+    "get_current_pat_diagnostics", "get_current_pat_drugs",
+    "get_current_pat_report_annotations", "get_current_pat_textual_obs_annotations",
+    "get_demo", "get_demographics3", "get_demographics3_batch", "get_empty_date_vector",
+    "get_free_gpu", "get_guess_datetime_column", "get_hosp_site",
+    "get_merged_pat_batch_appointments", "get_merged_pat_batch_bloods",
+    "get_merged_pat_batch_bmi", "get_merged_pat_batch_demo",
+    "get_merged_pat_batch_diagnostics", "get_merged_pat_batch_drugs",
+    "get_merged_pat_batch_epr_docs", "get_merged_pat_batch_mct_docs",
+    "get_merged_pat_batch_news", "get_merged_pat_batch_obs",
+    "get_merged_pat_batch_reports", "get_merged_pat_batch_textual_obs_docs", "get_news",
+    "get_pat_batch_appointments", "get_pat_batch_bloods", "get_pat_batch_bmi",
+    "get_pat_batch_demo", "get_pat_batch_diagnostics", "get_pat_batch_drugs",
+    "get_pat_batch_epr_docs", "get_pat_batch_epr_docs_annotations",
+    "get_pat_batch_mct_docs", "get_pat_batch_mct_docs_annotations",
+    "get_pat_batch_news", "get_pat_batch_obs", "get_pat_batch_reports",
+    "get_pat_batch_reports_docs_annotations",
+    "get_pat_batch_textual_obs_annotation_batch",
+    "get_pat_batch_textual_obs_annotations", "get_pat_batch_textual_obs_docs",
+    "get_pat_document_annotation_batch", "get_pat_document_annotation_batch_mct",
+    "get_pat_document_annotation_batch_reports", "get_pat_ipw_record",
+    "get_patient_timeline_dummy", "get_search_client_idcode_list_from_nhs_number_list",
+    "get_smoking", "get_start_end_year_month",
+    "get_treatment_docs_by_iterative_multi_term_cohort_searcher_no_terms_fuzzy",
+    "get_treatment_records_by_drug_order_name", "get_vte_status",
+    "group_images_by_suffix", "guess_datetime_columns", "handle_inconsistent_dtypes",
+    "impute_dataframe", "impute_datetime", "ingest_data_to_elasticsearch",
+    "initialize_cogstack_client", "iterative_drug_treatment_search",
+    "iterative_multi_term_cohort_searcher_no_terms_fuzzy",
+    "iterative_multi_term_cohort_searcher_no_terms_fuzzy_mct",
+    "iterative_multi_term_cohort_searcher_no_terms_fuzzy_textual_obs",
+    "join_docs_to_annots", "join_icd10_OPC4S_codes_to_annot",
+    "join_icd10_codes_to_annot", "json_to_dataframe", "list_chunker",
+    "list_dir_wrapper", "main", "main_batch", "manually_label_annotation_df", "matcher",
+    "maybe_nan", "mean_impute_dataframe", "medcat_trainer_export_to_df",
+    "merge_appointments_csv", "merge_bmi_csv", "merge_demographics_csv",
+    "merge_diagnostics_csv", "merge_drugs_csv", "merge_news_csv",
+    "missing_percentage_df", "multi_annots_to_df", "multi_annots_to_df_mct",
+    "multi_annots_to_df_reports", "multi_annots_to_df_textual_obs", "nearest",
+    "parse_medcat_trainer_project_json", "parse_meta_anns",
+    "plot_missing_pattern_bloods", "plot_ner_results", "prefetch_batches",
+    "prepare_diagnostic_datetime", "prepare_drug_datetime",
+    "prepare_hospital_site_data", "prepare_smoking_data", "prepare_vte_data",
+    "process_chunk", "process_csv_files", "process_csv_files_multi",
+    "process_demographics_data", "process_requirements",
+    "produce_filtered_annotation_dataframe", "pull_and_write", "pylist2searchlist",
+    "random_sample", "read_csv_wrapper", "read_remote", "read_test_data",
+    "recreate_json", "remove_file_from_paths", "retrieve_pat_annotations",
+    "retrieve_pat_annots_mct_epr", "retrieve_pat_bloods", "retrieve_pat_docs_mct_epr",
+    "run_generate_patient_timeline_and_append", "run_pip_compile", "sample_by_terms",
+    "sanitize_hospital_ids", "save_group", "save_missing_percentage",
+    "save_missing_values_pickle", "search_appointments", "search_bed_data",
+    "search_bloods_data", "search_bmi_observations", "search_cohort",
+    "search_core_o2_observations", "search_core_resus_observations",
+    "search_demographics", "search_diagnostic_orders", "search_drug_orders",
+    "search_hospital_site", "search_smoking", "search_vte", "set_best_gpu",
+    "set_index_safe_wrapper", "setup_logger", "sftp_exists", "split_and_append_chunks",
+    "split_and_save_csv", "split_clinical_notes", "split_clinical_notes_mct",
+    "stringlist2pylist", "stringlist2searchlist", "temporary_file",
+    "test_datetime_formats", "update_global_start_date", "update_pbar",
+    "validate_and_fix_global_dates", "validate_input_dates",
+    "verify_split_data_concatenated", "verify_split_data_individual", "without_keys",
+    "write_csv_wrapper", "write_remote"
+]