passagemath-repl 10.5.22__py3-none-any.whl → 10.5.23__py3-none-any.whl

{passagemath_repl-10.5.22.dist-info → passagemath_repl-10.5.23.dist-info}/METADATA

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.4
 Name: passagemath-repl
-Version: 10.5.22
+Version: 10.5.23
 Summary: passagemath: IPython kernel, Sage preparser, doctester
 Author-email: The Sage Developers <sage-support@googlegroups.com>
 Maintainer: Matthias Köppe, passagemath contributors
@@ -29,14 +29,14 @@ Classifier: Programming Language :: Python :: Implementation :: CPython
 Classifier: Topic :: Scientific/Engineering :: Mathematics
 Requires-Python: <3.14,>=3.9
 Description-Content-Type: text/x-rst
-Requires-Dist: passagemath-objects ~=10.5.22.0
-Requires-Dist: passagemath-environment ~=10.5.22.0
-Requires-Dist: ipykernel >=5.2.1
-Requires-Dist: ipython >=7.13.0
-Requires-Dist: ipywidgets >=7.5.1
+Requires-Dist: passagemath-objects~=10.5.23.0
+Requires-Dist: passagemath-environment~=10.5.23.0
+Requires-Dist: ipykernel>=5.2.1
+Requires-Dist: ipython>=7.13.0
+Requires-Dist: ipywidgets>=7.5.1
 Requires-Dist: jupyter-client
 Provides-Extra: sphinx
-Requires-Dist: sphinx <9,>=5.2 ; extra == 'sphinx'
+Requires-Dist: sphinx<9,>=5.2; extra == "sphinx"
 
 ===================================================================================
  passagemath: IPython kernel, Sage preparser, doctester

{passagemath_repl-10.5.22.dist-info → passagemath_repl-10.5.23.dist-info}/RECORD

@@ -1,21 +1,21 @@
-passagemath_repl-10.5.22.data/scripts/sage-cachegrind,sha256=FRrT4BoRsrATlQOrXALHAbDI_KLhz0XuDOD6xzECEl8,651
-passagemath_repl-10.5.22.data/scripts/sage-callgrind,sha256=pWhrI8NsVa_XSuay052htjxcM3thrpX8rI6Uj_pK5Uo,442
-passagemath_repl-10.5.22.data/scripts/sage-cleaner,sha256=vM0CkzbxiSCE0Z85AViQIvoxb5oUz5WOmVOvShbLDUY,7778
-passagemath_repl-10.5.22.data/scripts/sage-coverage,sha256=IhvqnFvmvNJBMQtiSu5_Qy52a67hG-r3cAeyhYOOj7w,10199
-passagemath_repl-10.5.22.data/scripts/sage-eval,sha256=4IHv01xH34wJPj61wzcL5ufhoO6Y3UTTGz7b-0YKJFw,266
-passagemath_repl-10.5.22.data/scripts/sage-fixdoctests,sha256=cTWoFr9rAdOF-xeW6ytNeX3EzhKcs1mTN4UilP4kiGg,36877
-passagemath_repl-10.5.22.data/scripts/sage-inline-fortran,sha256=T3U943WNPKrxQJuanBhTpXU3jJ5vjaXd56R8yWv_8PM,234
-passagemath_repl-10.5.22.data/scripts/sage-ipynb2rst,sha256=PynBPdthnpwGbILDRA38IwpT319Ze-g8UMmWaaTnimQ,1345
-passagemath_repl-10.5.22.data/scripts/sage-ipython,sha256=RYYd8-gmE5JE_-dCkOSDpC6rRsX6i6tma3pqgmXYJvM,342
-passagemath_repl-10.5.22.data/scripts/sage-massif,sha256=Tfqb6ON9d0OZnt6VlGS21asbdMq8zWzx8ZnvV1n_buI,613
-passagemath_repl-10.5.22.data/scripts/sage-notebook,sha256=QJ1Y4eTptc6TbNVXZswpcsn-NqaQNuSwjWE-lYmGpW8,8453
-passagemath_repl-10.5.22.data/scripts/sage-omega,sha256=4ARnHyZyB69ltxHj9xYpzad_YCBT3Nk0Wq3Ke09gExM,595
-passagemath_repl-10.5.22.data/scripts/sage-preparse,sha256=3L1KKgvSApvoK467Wza0S4WQLCXiYvivrhDKIvA1omc,10595
-passagemath_repl-10.5.22.data/scripts/sage-run,sha256=F1oAgPN7Kh5dO1smCyfGVT0Dy46NQ_dQ3OQZ8Wa6foM,689
-passagemath_repl-10.5.22.data/scripts/sage-run-cython,sha256=02mTGXokayRxISoCWWsDcKZwGrmh5B0mJJxTT87J01Q,235
-passagemath_repl-10.5.22.data/scripts/sage-runtests,sha256=nUvI3fCrBjqPUict01wIxwYPjvaZf4ttLp85tavUEpY,111
-passagemath_repl-10.5.22.data/scripts/sage-startuptime.py,sha256=RtIuC7jM3SOwROXTa6nnpJhzK0sQ24nDqyE6zXpCWEI,6209
-passagemath_repl-10.5.22.data/scripts/sage-valgrind,sha256=fZxy00oXU4PpHf_wc2uYKb7lzqSBY4VkhUxiuvXHKhA,1201
+passagemath_repl-10.5.23.data/scripts/sage-cachegrind,sha256=FRrT4BoRsrATlQOrXALHAbDI_KLhz0XuDOD6xzECEl8,651
+passagemath_repl-10.5.23.data/scripts/sage-callgrind,sha256=pWhrI8NsVa_XSuay052htjxcM3thrpX8rI6Uj_pK5Uo,442
+passagemath_repl-10.5.23.data/scripts/sage-cleaner,sha256=vM0CkzbxiSCE0Z85AViQIvoxb5oUz5WOmVOvShbLDUY,7778
+passagemath_repl-10.5.23.data/scripts/sage-coverage,sha256=IhvqnFvmvNJBMQtiSu5_Qy52a67hG-r3cAeyhYOOj7w,10199
+passagemath_repl-10.5.23.data/scripts/sage-eval,sha256=4IHv01xH34wJPj61wzcL5ufhoO6Y3UTTGz7b-0YKJFw,266
+passagemath_repl-10.5.23.data/scripts/sage-fixdoctests,sha256=cTWoFr9rAdOF-xeW6ytNeX3EzhKcs1mTN4UilP4kiGg,36877
+passagemath_repl-10.5.23.data/scripts/sage-inline-fortran,sha256=T3U943WNPKrxQJuanBhTpXU3jJ5vjaXd56R8yWv_8PM,234
+passagemath_repl-10.5.23.data/scripts/sage-ipynb2rst,sha256=PynBPdthnpwGbILDRA38IwpT319Ze-g8UMmWaaTnimQ,1345
+passagemath_repl-10.5.23.data/scripts/sage-ipython,sha256=RYYd8-gmE5JE_-dCkOSDpC6rRsX6i6tma3pqgmXYJvM,342
+passagemath_repl-10.5.23.data/scripts/sage-massif,sha256=Tfqb6ON9d0OZnt6VlGS21asbdMq8zWzx8ZnvV1n_buI,613
+passagemath_repl-10.5.23.data/scripts/sage-notebook,sha256=QJ1Y4eTptc6TbNVXZswpcsn-NqaQNuSwjWE-lYmGpW8,8453
+passagemath_repl-10.5.23.data/scripts/sage-omega,sha256=4ARnHyZyB69ltxHj9xYpzad_YCBT3Nk0Wq3Ke09gExM,595
+passagemath_repl-10.5.23.data/scripts/sage-preparse,sha256=3L1KKgvSApvoK467Wza0S4WQLCXiYvivrhDKIvA1omc,10595
+passagemath_repl-10.5.23.data/scripts/sage-run,sha256=F1oAgPN7Kh5dO1smCyfGVT0Dy46NQ_dQ3OQZ8Wa6foM,689
+passagemath_repl-10.5.23.data/scripts/sage-run-cython,sha256=02mTGXokayRxISoCWWsDcKZwGrmh5B0mJJxTT87J01Q,235
+passagemath_repl-10.5.23.data/scripts/sage-runtests,sha256=nUvI3fCrBjqPUict01wIxwYPjvaZf4ttLp85tavUEpY,111
+passagemath_repl-10.5.23.data/scripts/sage-startuptime.py,sha256=RtIuC7jM3SOwROXTa6nnpJhzK0sQ24nDqyE6zXpCWEI,6209
+passagemath_repl-10.5.23.data/scripts/sage-valgrind,sha256=fZxy00oXU4PpHf_wc2uYKb7lzqSBY4VkhUxiuvXHKhA,1201
 sage/all__sagemath_repl.py,sha256=z6lERTYuw3I4LQ7-hnEYbY1i-hMJj2uAm2ujOmWitSo,5713
 sage/doctest/__init__.py,sha256=JJMNkq7Rh3gCshtynqXDTLJgUKweNFlUhpnbvTLRMwg,166
 sage/doctest/__main__.py,sha256=wGVNiaPbhQwzoAs3Y1xhYBlB18pBieEDhi71ggF8NkQ,13647
@@ -24,15 +24,15 @@ sage/doctest/check_tolerance.py,sha256=YnYr981uSUZWfuv5OrXdytXsZx6PtJnQ7Mg8-Lj7p
 sage/doctest/control.py,sha256=4JBsC9GRFdAPPDTunknFx29Ea2KcFHVjJAceIHSGEyY,67877
 sage/doctest/external.py,sha256=ddr7S0bt1bqAHWyAQj0z4O1SrjwgpdY7ghDt4KZzDRo,15601
 sage/doctest/fixtures.py,sha256=UDSykekKanmnD737VXFv7r5QzcZmqzfwn1Noc_fKcnE,12784
-sage/doctest/forker.py,sha256=ej8-5TwrZZhnlC6apJ7jaGx0-06FxUe083PrSESkxRU,111238
+sage/doctest/forker.py,sha256=tfE1vO0LTgEZkXIhutD5mJFU8x1t_fton73mES8Y2LU,111239
 sage/doctest/marked_output.py,sha256=EJThXbkhYvYR5r1uuZyfPjeYHiLpHUgqTm1QZ5JTDgw,3034
-sage/doctest/parsing.py,sha256=GJRQRKX1cwr8fM5Gu2WxbxU3q8avsIskbH-7I2okjss,72167
+sage/doctest/parsing.py,sha256=5g1R7niBaa_6RE5WcGFF_Eqmzak1SpXWHEGnow_8Ifw,71130
 sage/doctest/parsing_test.py,sha256=7v3Y6kgLr7x5UF3CkdyNbRyhH4VRX275QPdCqG-jMxg,2652
 sage/doctest/reporting.py,sha256=8SBJ7I6Ea8OAENNdtfns4TlhLNvgF8Ss1Y8tef5-02o,33383
 sage/doctest/rif_tol.py,sha256=m8XljRCPyaj_Kpng-sNxsRSo0BJR3QY3CArhjEZ9c5s,4973
-sage/doctest/sources.py,sha256=T7GHWVrIG-qypXGnHr_-F9KJSvU_n-09LSzDqkJgyyE,63592
+sage/doctest/sources.py,sha256=ERm6ZwBAVlZ60tHBCLJy_WnLKZaTsU0mL8lOsInn3GY,63652
 sage/doctest/test.py,sha256=XU8RASl7HPLM_YoPcyQ9uIwG9oUTUyjl7N7xH74vzdo,22616
-sage/doctest/util.py,sha256=tvFeYl09UCHEpNUlRQWhRqvoZtpKGODfUTh5-vfv12I,23952
+sage/doctest/util.py,sha256=hEB0VduaItsQLmOJBY0unDphjv3XBdd8LvqbpzDQqaA,30871
 sage/doctest/tests/1second.rst,sha256=CHBQjhfvPPyBQmTslo-G7kC8Jr6i5DujXTT19AewsIk,74
 sage/doctest/tests/99seconds.rst,sha256=1FUWC-u5vVHqYd2VUUe_GELikmMvUEDZDt-kAU8u4TA,75
 sage/doctest/tests/abort.rst,sha256=lqKD_TZvcnO38zmXrp76HyLlVZNKd72rbaGGGhPgywQ,164
@@ -51,13 +51,13 @@ sage/doctest/tests/simple_failure.rst,sha256=063m5EMsTntr40npoAP4OYddiq9cPIA0Wrc
 sage/doctest/tests/sleep_and_raise.rst,sha256=QXRNJ5-kGU86KGNMVQZiJvxbMZxqf7dWzhjtjrPtZEY,900
 sage/doctest/tests/tolerance.rst,sha256=D5MeN4ZUkkTdQMEpYEtElPdQ-8p7DG-4LzOEnSsmapg,747
 sage/interfaces/cleaner.py,sha256=sd8_F8xGC7OMSoWcCPL3VAOPOuXZAOZu0ys1FExKYjQ,1560
-sage/interfaces/quit.py,sha256=SUtK6OR1-7klO_PgyW-kCQgDETSZ8cgY4T-Tq40P33Q,5329
+sage/interfaces/quit.py,sha256=iKuZ8m98g_2CNF4J9pfc-0KbE0HAadFZxwHPSydbrcA,5935
 sage/misc/all__sagemath_repl.py,sha256=Qxsf_bNAVB4CScgVoD0Lb9_RFwdK8BI3S0aqjFBz88c,1791
 sage/misc/banner.py,sha256=69sC578x0-t8a_l14w08xMLPBp0wcd8RsdTrcJq7ERQ,7883
 sage/misc/benchmark.py,sha256=4hW6hTGWfPb_E_U8V19Y_CPRN9_mUMsefrIb1rkzhfQ,6162
 sage/misc/classgraph.py,sha256=e9xZbH4cZhkY8uuNL-PrS1tyFXm8JcnhyE8uTDYOCoE,5155
 sage/misc/copying.py,sha256=jyY_AyAAFHAYGkj6Ca-kRd-PcW4qg18kDIUp1dVPk0M,423
-sage/misc/cython.py,sha256=5BfZp_zldl3OxEplkEwk-UkNYjxz-rpVXvi9-LGD9Vw,25849
+sage/misc/cython.py,sha256=0x7ohaPlQc-rxwaCoYxztBI2H9P-0aeZ8JOCml4nmbM,25865
 sage/misc/dev_tools.py,sha256=7Op4JFUXiYjUHN1lxO7blEVDr3vwYzDujO70XjwNDUE,28380
 sage/misc/edit_module.py,sha256=A3EctK2BgolhFtsCXtiShKzr_c0r3eGmb9HYnKPyOto,10528
 sage/misc/explain_pickle.py,sha256=KLuoOx_7xEeawgnLvheim4qmgMhPPOL0CcRxbP7CpWM,107704
@@ -69,7 +69,7 @@ sage/misc/profiler.py,sha256=r9M0GKmxEzWpZVuemY1ch03fd_zZz8kKpcEDXD8W-0k,5753
 sage/misc/python.py,sha256=qUdAqlft8VD4oG8U0iWN-r8RXGpGwD70K_00r4REXlo,1840
 sage/misc/remote_file.py,sha256=p3t4NT4_c0xUI8pLqWaw4RE0NX_O3a5K0VL3-W8wZqo,1545
 sage/misc/sage_eval.py,sha256=hvBRBay5CoInQM6NDNOaTV1_AYTgj2O_VGIst1uLuQ8,7780
-sage/misc/sage_input.py,sha256=MWivkHNX5SnWBvE5UM-baPK2kOhRip8rHgs7OyEE-Rg,121020
+sage/misc/sage_input.py,sha256=W-OU7dI_cNJfhAFcquE3m5G8X50Fizmart2T-4PYT3k,121062
 sage/misc/sagedoc.py,sha256=W2ZQxJd3JsbzdhnpZx5gvlzJgAav3byr8iHXUzfIW6U,67584
 sage/misc/sh.py,sha256=4aogzam8JR0jtvWOM5CXycjPjWqUNs7Pc9l0fNwmwuw,1446
 sage/misc/trace.py,sha256=xEwmVVALZ7aCciIRpspoY4IJuE1T9502P5KL2VH0yl0,2978
@@ -141,7 +141,7 @@ sage/tests/article_heuberger_krenn_kropf_fsm-in-sage.py,sha256=bam9TtDj7Wic1Fs5X
 sage/tests/arxiv_0812_2725.py,sha256=x1oO2O50QnrCm-zK2Wopzr5SnOlRz0LzNUo_AUORdZE,9942
 sage/tests/benchmark.py,sha256=XY3VTPMklhoM2m-8dxs3sypbeoo-gLFS9ZbWD7UBbYU,55488
 sage/tests/book_schilling_zabrocki_kschur_primer.py,sha256=mIr3XlcQKQXxjmagRuvBdpRG98PsDmx6ZCsGQfVdsq8,27118
-sage/tests/book_stein_ent.py,sha256=3k1T56sB-csaLzJEsEyVJ9YaMBKtgc0W1_z7cuwiz-Y,19767
+sage/tests/book_stein_ent.py,sha256=0cspmZEJvqibRTtt2F3cv75oLL0lvizEbKJANH50oeo,19782
 sage/tests/book_stein_modform.py,sha256=zX0Y1OqrjXT5pEFSrhn6AwHkx43PhgpiLVh8lnPwKaM,21168
 sage/tests/cmdline.py,sha256=2JiDN3yvOjlHOYtcGHXBZa4y_qc3KGlR3vPTzShVxN8,26316
 sage/tests/combinatorial_hopf_algebras.py,sha256=FTzMq8JyyKLAU3vFacMZZAer7PxALQpg3SFdEjBdo_s,1849
@@ -156,7 +156,7 @@ sage/tests/startup.py,sha256=G8Co8afXEC1FO9pyFlryBzLXXwY40_BcWrimaPadw3w,1185
 sage/tests/symbolic-series.py,sha256=5WlGSwW4eq-Ydev0jYtLDtuk1KCIJ7QCNE0IhZpc37Q,2991
 sage/tests/sympy.py,sha256=SGzxN4faL0Y3lokTYV_n_IYjf65pc1foBfLbxDhPDgk,431
 sage/tests/test_deprecation.py,sha256=Y2uvLozCshTPhQgfAxT_pAkkgX5Q16yJwQ0CleKHDJw,917
-passagemath_repl-10.5.22.dist-info/METADATA,sha256=SdA1b_Gcf35zlVK0riJjz8eiDn22E-ybbU04KD8ZIDI,3199
-passagemath_repl-10.5.22.dist-info/WHEEL,sha256=Mdi9PDNwEZptOjTlUcAth7XJDFtKrHYaQMPulZeBCiQ,91
-passagemath_repl-10.5.22.dist-info/top_level.txt,sha256=hibFyzQHiLOMK68qL1OWsNKaXOmSXqZjeLTBem6Yy7I,5
-passagemath_repl-10.5.22.dist-info/RECORD,,
+passagemath_repl-10.5.23.dist-info/METADATA,sha256=tyMxRK4h8MSThIayupsIkaH7DscdIR9tWII4inM2YX4,3192
+passagemath_repl-10.5.23.dist-info/WHEEL,sha256=CmyFI0kx5cdEMTLiONQRbGQwjIoR1aIYB7eCAQ4KPJ0,91
+passagemath_repl-10.5.23.dist-info/top_level.txt,sha256=hibFyzQHiLOMK68qL1OWsNKaXOmSXqZjeLTBem6Yy7I,5
+passagemath_repl-10.5.23.dist-info/RECORD,,

{passagemath_repl-10.5.22.dist-info → passagemath_repl-10.5.23.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (73.0.1)
+Generator: setuptools (78.1.0)
 Root-Is-Purelib: true
 Tag: py3-none-any
 

sage/doctest/forker.py

@@ -1829,8 +1829,8 @@ class DocTestDispatcher(SageObject):
 
             sage: # needs sage.all
             sage: from tempfile import NamedTemporaryFile as NTF
-            sage: with NTF(suffix='.py', mode='w+t') as f1, \
-            ....:      NTF(suffix='.py', mode='w+t') as f2:
+            sage: with (NTF(suffix='.py', mode='w+t') as f1,
+            ....:       NTF(suffix='.py', mode='w+t') as f2):
             ....:     _ = f1.write("'''\nsage: import time; time.sleep(60)\n'''")
             ....:     f1.flush()
             ....:     _ = f2.write("'''\nsage: True\nFalse\n'''")

sage/doctest/parsing.py

@@ -880,26 +880,6 @@ class SageDocTestParser(doctest.DocTestParser):
             sage: ex.source
             'for i in range(Integer(4)):\n    print(i)\n'
 
-        Sage currently accepts backslashes as indicating that the end
-        of the current line should be joined to the next line.  This
-        feature allows for breaking large integers over multiple lines
-        but is not standard for Python doctesting.  It's not
-        guaranteed to persist::
-
-            sage: n = 1234\
-            ....:     5678
-            sage: print(n)
-            12345678
-            sage: type(n)
-            <class 'sage.rings.integer.Integer'>
-
-        It also works without the line continuation::
-
-            sage: m = 8765\
-            4321
-            sage: print(m)
-            87654321
-
         Optional tags at the start of an example block persist to the end of
         the block (delimited by a blank line)::
 
@@ -994,15 +974,15 @@ class SageDocTestParser(doctest.DocTestParser):
             sage: # needs sage.combinat
             sage: parse("::\n\n    sage: # needs sage.combinat\n    sage: from sage.geometry.polyhedron.combinatorial_polyhedron.conversions \\\n    ....:         import incidence_matrix_to_bit_rep_of_Vrep\n    sage: P = polytopes.associahedron(['A',3])\n\n")
             ['::\n\n',
-            '',
-            (None,
-            'from sage.geometry.polyhedron.combinatorial_polyhedron.conversions import incidence_matrix_to_bit_rep_of_Vrep\n',
-            'from sage.geometry.polyhedron.combinatorial_polyhedron.conversions import incidence_matrix_to_bit_rep_of_Vrep\n'),
-            '',
-            (None,
-            "P = polytopes.associahedron(['A',3])\n",
-            "P = polytopes.associahedron(['A',Integer(3)])\n"),
-            '\n']
+             '',
+             (None,
+              'from sage.geometry.polyhedron.combinatorial_polyhedron.conversions \\\n        import incidence_matrix_to_bit_rep_of_Vrep\n',
+              'from sage.geometry.polyhedron.combinatorial_polyhedron.conversions         import incidence_matrix_to_bit_rep_of_Vrep\n'),
+             '',
+             (None,
+              "P = polytopes.associahedron(['A',3])\n",
+              "P = polytopes.associahedron(['A',Integer(3)])\n"),
+             '\n']
 
             sage: example4 = '::\n\n        sage: C.minimum_distance(algorithm="guava")  # optional - guava\n        ...\n        24\n\n'
             sage: parsed4 = DTP.parse(example4)
@@ -1017,20 +997,10 @@ class SageDocTestParser(doctest.DocTestParser):
         find_sage_continuation = re.compile(r"^(\s*)\.\.\.\.:", re.M)
         find_python_continuation = re.compile(r"^(\s*)\.\.\.([^\.])", re.M)
         python_prompt = re.compile(r"^(\s*)>>>", re.M)
-        backslash_replacer = re.compile(r"""(\s*)sage:(.*)\\\ *
-\ *((\.){4}:)?\ *""")
 
         # The following are used to allow ... at the beginning of output
         ellipsis_tag = "<TEMP_ELLIPSIS_TAG>"
 
-        # Hack for non-standard backslash line escapes accepted by the current
-        # doctest system.
-        m = backslash_replacer.search(string)
-        while m is not None:
-            g = m.groups()
-            string = string[:m.start()] + g[0] + "sage:" + g[1] + string[m.end():]
-            m = backslash_replacer.search(string, m.start())
-
         replace_ellipsis = not python_prompt.search(string)
         if replace_ellipsis:
             # There are no >>> prompts, so we can allow ... to begin the output

sage/doctest/sources.py

@@ -212,7 +212,7 @@ class DocTestSource:
             sage: from sage.doctest.control import DocTestDefaults
             sage: from sage.doctest.sources import FileDocTestSource
             sage: from sage.doctest.parsing import SageDocTestParser
-            sage: filename = sage.doctest.util.__file__
+            sage: filename = sage.doctest.marked_output.__file__
             sage: FDS = FileDocTestSource(filename, DocTestDefaults())
             sage: doctests, _ = FDS.create_doctests({})
             sage: manual_doctests = []
@@ -923,7 +923,7 @@ class SourceLanguage:
             sage: from sage.doctest.sources import FileDocTestSource
             sage: from sage.doctest.parsing import SageDocTestParser
             sage: from sage.doctest.util import NestedName
-            sage: filename = sage.doctest.util.__file__
+            sage: filename = sage.doctest.marked_output.__file__
             sage: FDS = FileDocTestSource(filename, DocTestDefaults())
             sage: doctests, _ = FDS.create_doctests({})
             sage: for dt in doctests:
@@ -943,7 +943,7 @@ class PythonSource(SourceLanguage):
 
         sage: from sage.doctest.control import DocTestDefaults
         sage: from sage.doctest.sources import FileDocTestSource
-        sage: filename = sage.doctest.sources.__file__
+        sage: filename = sage.doctest.marked_output.__file__
         sage: FDS = FileDocTestSource(filename, DocTestDefaults())
         sage: type(FDS)
         <class 'sage.doctest.sources.PythonFileSource'>
@@ -959,7 +959,7 @@ class PythonSource(SourceLanguage):
 
             sage: from sage.doctest.control import DocTestDefaults
             sage: from sage.doctest.sources import FileDocTestSource
-            sage: filename = sage.doctest.sources.__file__
+            sage: filename = sage.doctest.marked_output.__file__
             sage: FDS = FileDocTestSource(filename, DocTestDefaults())
             sage: FDS._init()
             sage: FDS.last_indent
@@ -994,7 +994,7 @@ class PythonSource(SourceLanguage):
 
             sage: from sage.doctest.control import DocTestDefaults
             sage: from sage.doctest.sources import FileDocTestSource
-            sage: filename = sage.doctest.sources.__file__
+            sage: filename = sage.doctest.marked_output.__file__
             sage: FDS = FileDocTestSource(filename, DocTestDefaults())
             sage: FDS._init()
             sage: FDS._update_quotetype('\"\"\"'); print(" ".join(list(FDS.quotetype)))
@@ -1087,7 +1087,7 @@ class PythonSource(SourceLanguage):
             sage: from sage.doctest.control import DocTestDefaults
             sage: from sage.doctest.sources import FileDocTestSource
             sage: from sage.doctest.util import NestedName
-            sage: filename = sage.doctest.sources.__file__
+            sage: filename = sage.doctest.marked_output.__file__
             sage: FDS = FileDocTestSource(filename, DocTestDefaults())
             sage: FDS._init()
             sage: FDS.starting_docstring("r'''")
@@ -1100,7 +1100,7 @@ class PythonSource(SourceLanguage):
             sage: FDS.starting_docstring("        '''")
             <...Match object...>
             sage: FDS.qualified_name
-            sage.doctest.sources.MyClass.hello_world
+            sage.doctest.marked_output.MyClass.hello_world
             sage: FDS.ending_docstring("    '''")
             <...Match object...>
             sage: FDS.starting_docstring("class NewClass():")
@@ -1109,7 +1109,7 @@ class PythonSource(SourceLanguage):
             sage: FDS.ending_docstring("    '''")
             <...Match object...>
             sage: FDS.qualified_name
-            sage.doctest.sources.NewClass
+            sage.doctest.marked_output.NewClass
             sage: FDS.starting_docstring("print(")
             sage: FDS.starting_docstring("    '''Not a docstring")
             sage: FDS.starting_docstring("    ''')")
@@ -1160,7 +1160,7 @@ class PythonSource(SourceLanguage):
             sage: from sage.doctest.control import DocTestDefaults
             sage: from sage.doctest.sources import FileDocTestSource
             sage: from sage.doctest.util import NestedName
-            sage: filename = sage.doctest.sources.__file__
+            sage: filename = sage.doctest.marked_output.__file__
             sage: FDS = FileDocTestSource(filename, DocTestDefaults())
             sage: FDS._init()
             sage: FDS.quotetype = "'''"

sage/doctest/util.py

@@ -25,6 +25,8 @@ AUTHORS:
 
 from time import time as walltime
 from os import sysconf, times
+from contextlib import contextmanager
+from cysignals.alarm import alarm, cancel_alarm, AlarmInterrupt
 
 
 def count_noun(number, noun, plural=None, pad_number=False, pad_noun=False):
@@ -750,3 +752,152 @@ class NestedName:
             True
         """
         return not (self == other)
+
+
+@contextmanager
+def ensure_interruptible_after(seconds: float, max_wait_after_interrupt: float = 0.2, inaccuracy_tolerance: float = 0.1):
+    """
+    Helper function for doctesting to ensure that the code is interruptible after a certain amount of time.
+    This should only be used for internal doctesting purposes.
+
+    EXAMPLES::
+
+        sage: from sage.doctest.util import ensure_interruptible_after
+        sage: with ensure_interruptible_after(1) as data: sleep(3)
+
+    ``as data`` is optional, but if it is used, it will contain a few useful values::
+
+        sage: data
+        {'alarm_raised': True, 'elapsed': 1...}
+
+    ``max_wait_after_interrupt`` can be passed if the function may take longer than usual to be interrupted::
+
+        sage: # needs sage.misc.cython
+        sage: cython(r'''
+        ....: from posix.time cimport clock_gettime, CLOCK_REALTIME, timespec, time_t
+        ....: from cysignals.signals cimport sig_check
+        ....:
+        ....: cpdef void uninterruptible_sleep(double seconds):
+        ....:     cdef timespec start_time, target_time
+        ....:     clock_gettime(CLOCK_REALTIME, &start_time)
+        ....:
+        ....:     cdef time_t floor_seconds = <time_t>seconds
+        ....:     target_time.tv_sec = start_time.tv_sec + floor_seconds
+        ....:     target_time.tv_nsec = start_time.tv_nsec + <long>((seconds - floor_seconds) * 1e9)
+        ....:     if target_time.tv_nsec >= 1000000000:
+        ....:         target_time.tv_nsec -= 1000000000
+        ....:         target_time.tv_sec += 1
+        ....:
+        ....:     while True:
+        ....:         clock_gettime(CLOCK_REALTIME, &start_time)
+        ....:         if start_time.tv_sec > target_time.tv_sec or (start_time.tv_sec == target_time.tv_sec and start_time.tv_nsec >= target_time.tv_nsec):
+        ....:             break
+        ....:
+        ....: cpdef void check_interrupt_only_occasionally():
+        ....:     for i in range(10):
+        ....:         uninterruptible_sleep(0.8)
+        ....:         sig_check()
+        ....: ''')
+        sage: with ensure_interruptible_after(1):  # not passing max_wait_after_interrupt will raise an error
+        ....:     check_interrupt_only_occasionally()
+        Traceback (most recent call last):
+        ...
+        RuntimeError: Function is not interruptible within 1.0000 seconds, only after 1.60... seconds
+        sage: with ensure_interruptible_after(1, max_wait_after_interrupt=0.9):
+        ....:     check_interrupt_only_occasionally()
+
+    TESTS::
+
+        sage: with ensure_interruptible_after(2) as data: sleep(1)
+        Traceback (most recent call last):
+        ...
+        RuntimeError: Function terminates early after 1... < 2.0000 seconds
+        sage: data
+        {'alarm_raised': False, 'elapsed': 1...}
+
+    The test above requires a large tolerance, because both ``time.sleep`` and
+    ``from posix.unistd cimport usleep`` may have slowdown on the order of 0.1s on Mac,
+    likely because the system is idle and GitHub CI switches the program out,
+    and context switch back takes time. Besides, there is an issue with ``Integer``
+    destructor, see `<https://github.com/sagemath/cysignals/issues/215>`_
+    So we use busy wait and Python integers::
+
+        sage: # needs sage.misc.cython
+        sage: cython(r'''
+        ....: from posix.time cimport clock_gettime, CLOCK_REALTIME, timespec, time_t
+        ....: from cysignals.signals cimport sig_check
+        ....:
+        ....: cpdef void interruptible_sleep(double seconds):
+        ....:     cdef timespec start_time, target_time
+        ....:     clock_gettime(CLOCK_REALTIME, &start_time)
+        ....:
+        ....:     cdef time_t floor_seconds = <time_t>seconds
+        ....:     target_time.tv_sec = start_time.tv_sec + floor_seconds
+        ....:     target_time.tv_nsec = start_time.tv_nsec + <long>((seconds - floor_seconds) * 1e9)
+        ....:     if target_time.tv_nsec >= 1000000000:
+        ....:         target_time.tv_nsec -= 1000000000
+        ....:         target_time.tv_sec += 1
+        ....:
+        ....:     while True:
+        ....:         sig_check()
+        ....:         clock_gettime(CLOCK_REALTIME, &start_time)
+        ....:         if start_time.tv_sec > target_time.tv_sec or (start_time.tv_sec == target_time.tv_sec and start_time.tv_nsec >= target_time.tv_nsec):
+        ....:             break
+        ....: ''')
+        sage: with ensure_interruptible_after(2) as data: interruptible_sleep(1r)
+        Traceback (most recent call last):
+        ...
+        RuntimeError: Function terminates early after 1.00... < 2.0000 seconds
+        sage: with ensure_interruptible_after(1) as data: uninterruptible_sleep(2r)
+        Traceback (most recent call last):
+        ...
+        RuntimeError: Function is not interruptible within 1.0000 seconds, only after 2.00... seconds
+        sage: data
+        {'alarm_raised': True, 'elapsed': 2.0...}
+        sage: with ensure_interruptible_after(1): uninterruptible_sleep(2r); raise RuntimeError
+        Traceback (most recent call last):
+        ...
+        RuntimeError: Function is not interruptible within 1.0000 seconds, only after 2.00... seconds
+        sage: data
+        {'alarm_raised': True, 'elapsed': 2.0...}
+
+    ::
+
+        sage: with ensure_interruptible_after(1) as data: raise ValueError
+        Traceback (most recent call last):
+        ...
+        ValueError
+        sage: data
+        {'alarm_raised': False, 'elapsed': ...}
+    """
+    seconds = float(seconds)
+    max_wait_after_interrupt = float(max_wait_after_interrupt)
+    inaccuracy_tolerance = float(inaccuracy_tolerance)
+    # use Python float to avoid slowdown with Sage Integer (see https://github.com/sagemath/cysignals/issues/215)
+    data = {}
+    start_time = walltime()
+    alarm(seconds)
+    alarm_raised = False
+
+    try:
+        yield data
+    except AlarmInterrupt as e:
+        e.__traceback__ = None  # workaround for https://github.com/python/cpython/pull/129276
+        alarm_raised = True
+    finally:
+        before_cancel_alarm_elapsed = walltime() - start_time
+        cancel_alarm()
+        elapsed = walltime() - start_time
+        data["elapsed"] = elapsed
+        data["alarm_raised"] = alarm_raised
+
+    if elapsed > seconds + max_wait_after_interrupt:
+        raise RuntimeError(
+                f"Function is not interruptible within {seconds:.4f} seconds, only after {elapsed:.4f} seconds"
+                + ("" if alarm_raised else " (__exit__ called before interrupt check)"))
+
+    if alarm_raised:
+        if elapsed < seconds - inaccuracy_tolerance:
+            raise RuntimeError(f"Interrupted too early: {elapsed:.4f} < {seconds:.4f}, this should not happen")
+    else:
+        raise RuntimeError(f"Function terminates early after {elapsed:.4f} < {seconds:.4f} seconds")

sage/interfaces/quit.py

@@ -12,13 +12,24 @@ Quitting interfaces
 #                  https://www.gnu.org/licenses/
 ################################################################################
 
+from __future__ import annotations
+
 import os
+import subprocess
+import sys
+from typing import TYPE_CHECKING
 
+from sage.env import DOT_SAGE, HOSTNAME
 from sage.misc.cachefunc import cached_function
 
+if TYPE_CHECKING:
+    from weakref import ReferenceType
+
+    from sage.interfaces.expect import Expect
+
 
 @cached_function
-def sage_spawned_process_file():
+def sage_spawned_process_file() -> str:
     """
     EXAMPLES::
 
@@ -29,23 +40,22 @@ def sage_spawned_process_file():
     # This is the old value of SAGE_TMP. Until sage-cleaner is
     # completely removed, we need to leave these spawned_processes
     # files where sage-cleaner will look for them.
-    from sage.env import DOT_SAGE, HOSTNAME
     d = os.path.join(DOT_SAGE, "temp", HOSTNAME, str(os.getpid()))
     os.makedirs(d, exist_ok=True)
     return os.path.join(d, "spawned_processes")
 
 
-def register_spawned_process(pid, cmd=''):
+def register_spawned_process(pid: int, cmd: str = "") -> None:
     """
     Write a line to the ``spawned_processes`` file with the given
     ``pid`` and ``cmd``.
     """
-    if cmd != '':
+    if cmd != "":
         cmd = cmd.strip().split()[0]
     # This is safe, since only this process writes to this file.
     try:
-        with open(sage_spawned_process_file(), 'a') as o:
-            o.write('%s %s\n' % (pid, cmd))
+        with open(sage_spawned_process_file(), "a") as file:
+            file.write("%s %s\n" % (pid, cmd))
     except OSError:
         pass
     else:
@@ -53,13 +63,14 @@ def register_spawned_process(pid, cmd=''):
         # the cleaner ourselves upon being told that there will be
         # something to clean.
         from sage.interfaces.cleaner import start_cleaner
+
         start_cleaner()
 
 
-expect_objects = []
+expect_objects: list[ReferenceType[Expect]] = []
 
 
-def expect_quitall(verbose=False):
+def expect_quitall(verbose: bool = False) -> None:
     """
     EXAMPLES::
 
@@ -74,17 +85,17 @@ def expect_quitall(verbose=False):
         sage: sage.interfaces.quit.expect_quitall(verbose=True)                         # needs sage.libs.pari
         Exiting PARI/GP interpreter with PID ... running .../gp --fast --emacs --quiet --stacksize 10000000
     """
-    for P in expect_objects:
-        R = P()
-        if R is not None:
+    for reference in expect_objects:
+        process = reference()
+        if process is not None:
             try:
-                R.quit(verbose=verbose)
+                process.quit(verbose=verbose)
             except RuntimeError:
                 pass
     kill_spawned_jobs()
 
 
-def kill_spawned_jobs(verbose=False):
+def kill_spawned_jobs(verbose: bool = False):
     """
     INPUT:
 
@@ -110,19 +121,23 @@ def kill_spawned_jobs(verbose=False):
     if not os.path.exists(fname):
         return
 
-    with open(fname) as f:
-        for L in f:
-            i = L.find(' ')
-            pid = L[:i].strip()
+    with open(fname) as file:
+        for line in file:
+            i = line.find(" ")
+            pid = line[:i].strip()
             try:
                 if verbose:
                     print("Killing spawned job %s" % pid)
-                os.killpg(int(pid), 9)
+                if sys.platform == "win32":
+                    # From https://stackoverflow.com/a/47756757/873661
+                    subprocess.call(["taskkill", "/F", "/T", "/PID", pid])
+                else:
+                    os.killpg(int(pid), 9)
             except OSError:
                 pass
 
 
-def is_running(pid):
+def is_running(pid: int) -> bool:
     """
     Return ``True`` if and only if there is a process with id pid running.
     """
@@ -133,11 +148,11 @@ def is_running(pid):
         return False
 
 
-def invalidate_all():
+def invalidate_all() -> None:
     """
     Invalidate all of the expect interfaces.
 
-    This is used, e.g., by the fork-based @parallel decorator.
+    This is used, e.g., by the fork-based ``@parallel`` decorator.
 
     EXAMPLES::
 
@@ -157,7 +172,7 @@ def invalidate_all():
         sage: a, b                                                                      # needs sage.libs.pari sage.symbolic
         (2, 3)
     """
-    for I in expect_objects:
-        I1 = I()
-        if I1:
-            I1.detach()
+    for reference in expect_objects:
+        process = reference()
+        if process:
+            process.detach()

sage/misc/cython.py

@@ -61,7 +61,7 @@ def _standard_libs_libdirs_incdirs_aliases():
     if SAGE_LOCAL:
         standard_libdirs.append(os.path.join(SAGE_LOCAL, "lib"))
     standard_libdirs.extend(aliases["CBLAS_LIBDIR"] + aliases["NTL_LIBDIR"])
-    standard_incdirs = sage_include_directories() + aliases["CBLAS_INCDIR"] + aliases["NTL_INCDIR"]
+    standard_incdirs = sage_include_directories(use_sources=True) + aliases["CBLAS_INCDIR"] + aliases["NTL_INCDIR"]
     return standard_libs, standard_libdirs, standard_incdirs, aliases
 
 ################################################################

sage/misc/sage_input.py

@@ -1405,10 +1405,10 @@ class SageInputExpression:
             sage: sie(4)
             {call: {atomic:3}({atomic:4})}
         """
-        args = [self._sie_builder(_) for _ in args]
-        for k in kwargs:
-            kwargs[k] = self._sie_builder(kwargs[k])
-        return SIE_call(self._sie_builder, self, args, kwargs)
+        new_args = [self._sie_builder(arg) for arg in args]
+        new_kwargs = {key: self._sie_builder(val)
+                      for key, val in kwargs.items()}
+        return SIE_call(self._sie_builder, self, new_args, new_kwargs)
 
     def __getitem__(self, key):
         r"""

sage/tests/book_stein_ent.py

@@ -21,11 +21,11 @@ sage: factor(2007)
 3^2 * 223
 sage: factor(31415926535898)
 2 * 3 * 53 * 73 * 2531 * 534697
-sage: n = 7403756347956171282804679609742957314259318888\
-....: 9231289084936232638972765034028266276891996419625117\
-....: 8439958943305021275853701189680982867331732731089309\
-....: 0055250511687706329907239638078671008609696253793465\
-....: 0563796359
+sage: n = Integer('7403756347956171282804679609742957314259318888'
+....: '9231289084936232638972765034028266276891996419625117'
+....: '8439958943305021275853701189680982867331732731089309'
+....: '0055250511687706329907239638078671008609696253793465'
+....: '0563796359')
 sage: len(n.str(2))
 704
 sage: len(n.str(10))