passagemath-graphs 10.5.39__cp311-cp311-macosx_13_0_x86_64.whl → 10.5.41__cp311-cp311-macosx_13_0_x86_64.whl

{passagemath_graphs-10.5.39.dist-info → passagemath_graphs-10.5.41.dist-info}/METADATA

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: passagemath-graphs
-Version: 10.5.39
+Version: 10.5.41
 Summary: passagemath: Graphs, posets, hypergraphs, designs, abstract complexes, combinatorial polyhedra, abelian sandpiles, quivers
 Author-email: The Sage Developers <sage-support@googlegroups.com>
 Maintainer: Matthias Köppe, passagemath contributors
@@ -29,9 +29,9 @@ Classifier: Topic :: Scientific/Engineering :: Mathematics
 Requires-Python: <3.14,>=3.9
 Description-Content-Type: text/x-rst
 Requires-Dist: gmpy2~=2.1.b999
-Requires-Dist: cysignals==1.12.0rc2
+Requires-Dist: cysignals!=1.12.0,>=1.11.2
 Requires-Dist: memory_allocator
-Requires-Dist: passagemath-categories~=10.5.39.0
+Requires-Dist: passagemath-categories~=10.5.41.0
 Provides-Extra: test
 Requires-Dist: passagemath-repl; extra == "test"
 Provides-Extra: benzene

{passagemath_graphs-10.5.39.dist-info → passagemath_graphs-10.5.41.dist-info}/RECORD

@@ -1,8 +1,8 @@
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 passagemath_graphs.dylibs/libgmp.10.dylib,sha256=KWbopqse81gamnnS9s6RJUAT7etWefG99meCR47T7pI,580928
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 sage/all__sagemath_graphs.py,sha256=Az4kzTDShM1H7Ia4kpAbLF2MvAtsbOWwJACGSzPqOT8,752
 sage/topology/simplicial_complex_catalog.py,sha256=JGHpK2P6JilXIbnSIanraJTST2SQaHSqBWg8ZAlqhFU,4396
 sage/topology/simplicial_complex_homset.py,sha256=8wSfpi6t6qQpRW1CkLSb36eFieflaYQKpcshdEjutZ8,7425
@@ -22,73 +22,73 @@ sage/topology/simplicial_complex.py,sha256=5rPDy-11TzNggeM-QKDYt21KAGAzmcMULNAnk
 sage/topology/cell_complex.py,sha256=2La9yE3TJ5Rtm4CY-LqKC6LrUofaufqQUaoVN7G8p00,47382
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 sage/databases/knotinfo_db.py,sha256=EafNspIultVKdtZrwtzYySTGxPun0oTXN_zFCwagYQE,54188
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 sage/combinat/shard_order.py,sha256=hULsSgJS39xMwEe8UrNCkoTZii41V-cROxE0PAvsE8k,8060
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-sage/combinat/ordered_tree.py,sha256=yuJ10B1iJ1ylgll0mQ5XIO5Lv6dv7b6REedfAJrsq34,47856
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 sage/combinat/all__sagemath_graphs.py,sha256=zAse3aKr_WJaFWDL93rOM8mNuHUvs_hs0gJsoxfbqiQ,1329
 sage/combinat/yang_baxter_graph.py,sha256=BGcGaIfAnOzW4g9tCg6uDpKrHHeG-Q5z74TBQa0JYhc,33932
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 sage/combinat/designs/subhypergraph_search.pyx,sha256=HLopGk2XtAZXaMHWSrAhhBdJC87szaeaNrcKpvSAFvA,18125
 sage/combinat/designs/block_design.py,sha256=PHZG5Q9egUb7PwVnX2MQq6UPATxZPp5zq_VpJzWLAxU,38165
 sage/combinat/designs/database.py,sha256=3zky0T2enXCAIFXfsHUlB1z2JsGbIuNpC8HFEHltgT0,242946
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 sage/combinat/designs/designs_pyx.pxd,sha256=d78q7gQf58kZirLF1TXxNjLi50YYo-EIUM2e4kXS5C8,679
 sage/combinat/designs/all.py,sha256=z1avRgBKp3Gu_OhxVMFYtxWoXCBOcFd_t5-C1JcoAkw,2015
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 sage/combinat/designs/covering_design.py,sha256=7QpRR_ziEyHK5u1l9HgP4w5LdT4FOIk2h7d15NBdois,17375
 sage/combinat/designs/difference_family.py,sha256=0fhKdWJVL0uErG5BwLfJKt2cDgF8gHIkudLtF6So1rI,155391
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 sage/combinat/cluster_algebra_quiver/quiver.py,sha256=6-EKk63ZQdHekayChrNd24M8CZpGTNZ5DQujNDQ9tfQ,86317
 sage/combinat/cluster_algebra_quiver/mutation_type.py,sha256=MexdkgJF64f58LdVPDLaqdUYNtTbt4oCt7Gm5R-HKGg,76837
 sage/combinat/cluster_algebra_quiver/mutation_class.py,sha256=cv4g59ZLppsG55L2t5ec0TviJ0yuCqozpakIBGFAUUQ,24134
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 sage/combinat/cluster_algebra_quiver/quiver_mutation_type.py,sha256=24QBRRseafrBvShSJC_ilP7nY6QwDX0U1GkMDxFhoBA,92005
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 sage/combinat/posets/posets.py,sha256=IVvddH6UUbUjFI1WhY6zKQUJBeC7UuhhfOOKEmZI1o8,332834
 sage/combinat/posets/poset_examples.py,sha256=23w6JjtzVyOR9RV-L8K1zLP41wUcI7H2ENtoLURt_IU,77050
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 sage/combinat/posets/lattices.py,sha256=W2fN9oRs5dUUTX5cbw7iFFeEAj3c3oExhPQCEputFbQ,186239
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 sage/combinat/posets/linear_extension_iterator.pyx,sha256=1DVxfIsMvtsPGjOi3SUjWtVKFKXQfnk_UXKtmsTpQl4,9272
 sage/combinat/posets/elements.py,sha256=xKAD36BOIBtKi3AJ-ITCQMnjjrnjSSBfDPokdIdz2y8,7961
 sage/combinat/posets/mobile.py,sha256=1Fzspx-afq66PO_5BTJoprp4GemROCPnZOacqZiJXI4,10558
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 sage/combinat/posets/all.py,sha256=A-S_eIm6Io7aE5YjG_ETS9Fsam30I8xOIR56QG8hpMs,1438
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 sage/combinat/posets/hasse_diagram.py,sha256=Z87fc4ssKwWWxD2Mjvf5L0xZDyG8fheArbNQrelJTM4,133265
 sage/combinat/posets/hasse_cython.pyx,sha256=xGUFu90go4BA_LwmXkbbRT5wnb5WB71jmwU1JnW4fj4,5989
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 sage/ext_data/all__sagemath_graphs.py,sha256=hFccVjiRkLdUqyJcwgIkR5OUo1DvjVPZwsCZIWtgEXM,45
 sage/ext_data/kenzo/S4.txt,sha256=iSXavQqy7ep6HFOWnnsHtqoDhL4Hu3s1SpsaUKbizWs,272
 sage/ext_data/kenzo/CP4.txt,sha256=WXb63Qce3f9Z3Q6K3_zkI0W4-cHBM93XMn7K5bNQD3U,640878
@@ -102,10 +102,10 @@ sage/sandpiles/examples.py,sha256=NNlBeEP0Nd7G4FNDNbsGRH51a1vOX-Pxo2aUjY1cUao,55
 sage/groups/all__sagemath_graphs.py,sha256=hFccVjiRkLdUqyJcwgIkR5OUo1DvjVPZwsCZIWtgEXM,45
 sage/groups/perm_gps/all__sagemath_graphs.py,sha256=hFccVjiRkLdUqyJcwgIkR5OUo1DvjVPZwsCZIWtgEXM,45
 sage/groups/perm_gps/partn_ref/refinement_graphs.pyx,sha256=AyuBZ0MJ0x9EIiVzInK__7W4dy_hCONOBHyP4qy721M,56634
-sage/groups/perm_gps/partn_ref/refinement_graphs.cpython-311-darwin.so,sha256=2kUfGRxZoR4G2qF4Z8emA6U6SFaoFnW6tdEI8Rceq4o,346576
+sage/groups/perm_gps/partn_ref/refinement_graphs.cpython-311-darwin.so,sha256=E6zk3MNnI5EDUc1yfGz0FSw_4RrrX9UYFy6OidnC4jQ,346544
 sage/groups/perm_gps/partn_ref/all__sagemath_graphs.py,sha256=hFccVjiRkLdUqyJcwgIkR5OUo1DvjVPZwsCZIWtgEXM,45
 sage/groups/perm_gps/partn_ref/refinement_graphs.pxd,sha256=6sU1BVnxoySV9GhDXZsUKBlAgAMBqc8Bp3FELHB3neU,1759
-sage/graphs/weakly_chordal.cpython-311-darwin.so,sha256=8aRHG5uPJRfgfjrePD-7E7I_3rVo-06j1KKPUVj4sEM,185872
+sage/graphs/weakly_chordal.cpython-311-darwin.so,sha256=6EXcrjsKkDC7mNxpcFiZGs8aFZ8KB9KsmkgJCN-02GU,185840
 sage/graphs/graph_editor.py,sha256=_6wr59GPJfl0lylU_tMsqQbc1jH8E8GD6ZxQdVBxBYQ,2850
 sage/graphs/digraph_generators.py,sha256=QcVOE4jpqe8QxbEk79fFr33Mc0zZuIjJadkKTJG_-Bc,75899
 sage/graphs/asteroidal_triples.pyx,sha256=8y4J9SN8HNXQIBRQjXPAmeSfkqJ1KaHmOe-NV5_3dpI,10431
@@ -115,49 +115,49 @@ sage/graphs/independent_sets.pxd,sha256=ozW1INPrNhfTHx9P0yQBW9m4C0VyNILAr2MixvI-
 sage/graphs/matching_covered_graph.py,sha256=B_-x9cutL3AIMGaKIayFyMyIUIB6JjZSDY3fy9OB-kc,143004
 sage/graphs/trees.pxd,sha256=wyQiHIkw7Zf3CCJqf1hLxJsCHOg_4D2R8cDcTGPHe3E,377
 sage/graphs/traversals.pxd,sha256=B17xUmzx5ar22san3Zcz6iX2borzlmLYHQWBzJ8cuXY,481
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 sage/graphs/line_graph.pyx,sha256=fg92Q-gxnzRMjPmID7IztliBYP7n8JL0HhpK0CTCLio,22272
 sage/graphs/hyperbolicity.pyx,sha256=Xij4iR3b0gQ0095UklppcWc3uZfEeh3GlcjrYlN0jVM,64417
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 sage/graphs/domination.py,sha256=BRTVApP6SeB-NVe3rcuJDfpSbg6jWRc4rWgTPgMUsVo,48674
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 sage/graphs/tutte_polynomial.py,sha256=Wcid9JQ5dJFZITAzmJ18YnOskNPxCbzXvBDvgjNE-pA,21811
 sage/graphs/pq_trees.py,sha256=6z6pzjeApBLvjx4FTqxklFHjEcwoF9Z78LlvTpcv0G0,39418
 sage/graphs/partial_cube.py,sha256=u4X-fZgUIcaX9QSIv_N8kbVUYRx3dH51LCmEfc2nYkg,16402
-sage/graphs/genus.cpython-311-darwin.so,sha256=lcXdWs5mWAMWGv39oyxG8CQQ1BtKZZ2_oZl9RZcd8bU,147984
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 sage/graphs/graph_plot.py,sha256=EfcwzdjrtsUuEXoyWb6j1CbkJt170ASzCmgkJiFuMfI,70278
 sage/graphs/graph_list.py,sha256=7gWLlXkPTYI5C8MuWRJuevejpLVc6xcHbW2OjzQK0xw,12705
 sage/graphs/print_graphs.py,sha256=pBg_hHJxWAcsEzqbqDG4ehZg8C1LreySAbqcoHBmE_A,4931
@@ -166,7 +166,7 @@ sage/graphs/dot2tex_utils.py,sha256=nCUHldadHC4Jvdx3sOWypkwlRH7Lc3x_xCuJOk_o4jA,
 sage/graphs/traversals.pyx,sha256=si8EwslGcNTJYevubcuwqxmVgKTV0MhFk3ojDHGZnQw,66058
 sage/graphs/path_enumeration.pyx,sha256=5xXf3-5mobCohaddLgVx-jhyZaT7R4cB8lsNyVUb2zU,90410
 sage/graphs/isoperimetric_inequalities.pyx,sha256=4pdhidMCuISinpH-4v7yxppuLZ7niRrIr5LjY62bPMc,15689
-sage/graphs/graph_generators_pyx.cpython-311-darwin.so,sha256=epDuJJmqKThlqYaiUB9slwnsL_2JLhZs2S5SSDx59KM,99016
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 sage/graphs/weakly_chordal.pyx,sha256=hgEid9JOeR2WYmMbnVM2_E4DSUHrb5iaN3E6oFFhqs8,19988
 sage/graphs/graph_database.py,sha256=IR6SzI3zZXhWrAhWOat_rweckxNYsq108GTL5APxCco,49241
 sage/graphs/trees.pyx,sha256=fxCGm1lmkjsaLSg4L0IbnA_gMzYIWhPwbU07_C8e5UA,8733
@@ -174,18 +174,18 @@ sage/graphs/centrality.pyx,sha256=mJIHu3It0FzZsJ9vhNi5h1sr2_7SHFdPtXmUx6-c-R0,34
 sage/graphs/spanning_tree.pyx,sha256=WbPx-yeaNy_UQOOL6UqdHrYvJPhv3J-1t7rWgCo_Rks,55241
 sage/graphs/strongly_regular_db.pyx,sha256=FFxau4Zr8YjZp7wboDqJmCWcNOEHwxfizCnOrzicisU,132851
 sage/graphs/independent_sets.pyx,sha256=AA4D-pjoMyguifXSDRCZJmwZqfTMIv6tVpxXiDo83vs,13082
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 sage/graphs/cographs.py,sha256=LTajbKp8uk-4NPdnuEUyd181qDXgA4Qb73r7_RNrx8c,15187
 sage/graphs/graph_generators.py,sha256=TXNwxiDlyj8bBjkhA_bKhZljkk2k1pC736YYMyla3EA,133965
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 sage/graphs/orientations.py,sha256=ZMTASPviyKb4t2swDdTajNeGfemG3vbVmU9IwRUmCzU,53818
 sage/graphs/comparability.pyx,sha256=k6yGZH9qZbabyaIGPQBGY75Tmsl8EaT-_XyTgPtKPRI,30696
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 sage/graphs/generators/degree_sequence.py,sha256=oN9BFV3aC3g0Im_L9v1bx4aBzEf2qFRc8IHpxMVLkF8,8735
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 sage/graphs/generators/distance_regular.pyx,sha256=qnYVaHCpc7L4m2Z1pXuEg98tyJ2ED73bNky5_Fk9ASI,96145
 sage/graphs/generators/smallgraphs.py,sha256=Kwqzi6iXl36QRVJ8L9-YQcuRjIMlAVhJQpMDdXmwIBY,201988
 sage/graphs/generators/families.py,sha256=Ex6zqwclb1OXLs7uzuLaBzrWmiephaD0nwKSR5jYxGY,164644
@@ -197,39 +197,39 @@ sage/graphs/generators/platonic_solids.py,sha256=v3TMsnK2gI0vnhX9IxP3IsTWqw6GpYQ
 sage/graphs/generators/intersection.py,sha256=N3C3dLzBjL_Jeii1aU_Xm3O78yMLvZoAY1Y6Egu4MxA,20349
 sage/graphs/generators/classical_geometries.py,sha256=3xoCUEGmShNiGwvc5eKvFbLgeQH-lWM23Iv2uYVtp5A,63415
 sage/graphs/generators/world_map.py,sha256=YZ992gxxy6kXKaWvbXqG2tfxk5AaHw3a0t991pskPlY,34547
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 sage/graphs/base/static_sparse_backend.pyx,sha256=Gu5fS7Jq-p2jfNuU-QwV60YsUtyc2jVlZ9h9hWCM9eE,55323
-sage/graphs/base/dense_graph.cpython-311-darwin.so,sha256=NP0nUkaJtwptem-_PnLtoUg9qDUatiN3n43cxtnVBMk,191344
+sage/graphs/base/dense_graph.cpython-311-darwin.so,sha256=UVPqnK_v0PBrUVqEJVwk80A30nlz3Z3rpZLjRCFTgdE,191312
 sage/graphs/base/sparse_graph.pxd,sha256=O0oPH_Z1-fsxPK-mKMnNq-OL5cE0GcDILqDj-ajytlk,3485
 sage/graphs/base/dense_graph.pyx,sha256=HfZU7L2IScsA8_a6VCcs8rM6aWRkYTSz8oRhJWHX5mY,24167
-sage/graphs/base/static_sparse_backend.cpython-311-darwin.so,sha256=RFwE-tG4mwUDqbGkxCvT4zFXU1GX89YrZIY_DG6lNoo,339792
+sage/graphs/base/static_sparse_backend.cpython-311-darwin.so,sha256=DkIB6I-wXZTZA2tJb11GnYd1K5kcQEMpTgi-YG2yYOI,339760
 sage/graphs/base/graph_backends.pxd,sha256=DNjOnDRc2RPV-NtCHuoliKpNfJHC3aK7l0RifUR7DSY,150
 sage/graphs/base/static_dense_graph.pyx,sha256=XyiD925fEEu1z4qu-Mp490Z8Vme_ii_SLRnSAdiLu48,37439
 sage/graphs/base/all.py,sha256=hFccVjiRkLdUqyJcwgIkR5OUo1DvjVPZwsCZIWtgEXM,45
@@ -239,14 +239,14 @@ sage/graphs/base/dense_graph.pxd,sha256=VltYtRdTHhfpXG11C-lfMPSlm57dyP4Ot3E3FOzl
 sage/graphs/base/graph_backends.pyx,sha256=vl_Cs6xcJJSDlHEfSO55bUQMSziLY3WYnsOza3oK13o,24526
 sage/graphs/base/static_sparse_backend.pxd,sha256=DbBBsONS0Utp1szKGQaeTpoqiNC23XDaL9tnMrDAxvI,903
 sage/graphs/base/sparse_graph.pyx,sha256=dNMlc3m2Vl7fXCz5c7a-rse4boVsMSl3AevHmF0AIo0,56300
-sage/graphs/base/static_sparse_graph.cpython-311-darwin.so,sha256=blaveB4C9FVN2f5TueKPn5NrRC_HY0be0YuJswUV6Do,237744
-sage/graphs/base/boost_graph.cpython-311-darwin.so,sha256=a7ejc0cOyzyuA0n15wb3zeA1OMbt-ibVb1-wkCIouVw,916312
+sage/graphs/base/static_sparse_graph.cpython-311-darwin.so,sha256=of3BgjX1siYNTsi5UZ2ua4HV-EIwlJvCUIHntsuwtos,237712
+sage/graphs/base/boost_graph.cpython-311-darwin.so,sha256=PFTFQUe8nsFeMYZ1z1GqkQCRF1jZDLXwcm0rLmFwfUg,916288
 sage/graphs/base/c_graph.pxd,sha256=pUsZ48m4XXx4fq8fRWeeaFkM0gzX0r63Kkw7L0IJdfk,4281
 sage/graphs/base/boost_graph.pyx,sha256=mWfPc01Gtyy3YDQ93CcOWZMhsUXN5q2BiyKt4wls-c8,111074
-sage/graphs/base/static_dense_graph.cpython-311-darwin.so,sha256=_Oj_bAZH_EAYxU4NHwywuqqUVg4YrQMGfAQmvT1-Mns,274128
+sage/graphs/base/static_dense_graph.cpython-311-darwin.so,sha256=Lr5ao-XYkzjUPCRg6tP1BdFVNWtU1HEs2HDNM5jkT3U,274096
 sage/graphs/base/static_sparse_graph.pxd,sha256=YYCH7F6h1OteiFLfleAb57CCN-gx42n3W_9fzh8avkA,1500
-sage/graphs/base/c_graph.cpython-311-darwin.so,sha256=20N5EPmCou-FF1m_lYNggYCXp2Tuh9ff7e0Dk4cqcQ8,667808
-sage/graphs/base/sparse_graph.cpython-311-darwin.so,sha256=5LkSqZuIO-xr3wM7XWRi72IYK0mwRHLVw_A6J_tiE7Q,235376
+sage/graphs/base/c_graph.cpython-311-darwin.so,sha256=xBVz73LV4mpe-hlF28U6zsU92XC3bFBOuorFhreisd0,667776
+sage/graphs/base/sparse_graph.cpython-311-darwin.so,sha256=GU87CTICXDnPOkDLq4D8apZUpb_VsjF5TBxv_SYPzkQ,235344
 sage/knots/link.py,sha256=L6vA6oqMri3ZD5xY8zclLwuqywrzoWbfpVTskcyBtkk,177868
 sage/knots/free_knotinfo_monoid.py,sha256=IyaKmc4kQclQoAe9loqp9Cq2Ny7BoQXwjPFn_QYwMoY,19713
 sage/knots/knotinfo.py,sha256=ACmrGn9_t6Ff3y5xaTDLO8JJS0_Wkfb2qItWf6Nu9mI,101893

{passagemath_graphs-10.5.39.dist-info → passagemath_graphs-10.5.41.dist-info}/WHEEL

@@ -1,5 +1,5 @@
 Wheel-Version: 1.0
-Generator: setuptools (80.8.0)
+Generator: setuptools (80.9.0)
 Root-Is-Purelib: false
 Tag: cp311-cp311-macosx_13_0_x86_64
 Generator: delocate 0.13.0

sage/combinat/abstract_tree.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Abstract Recursive Trees
+Abstract recursive trees
 
 The purpose of this class is to help implement trees with a specific structure
 on the children of each node. For instance, one could want to define a tree in

sage/combinat/binary_tree.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 """
-Binary Trees
+Binary trees
 
 This module deals with binary trees as mathematical (in particular immutable)
 objects.

sage/combinat/cluster_algebra_quiver/all.py

@@ -2,7 +2,7 @@
 r"""
 Cluster algebras and quivers
 
-- A compendium on the cluster algebra and quiver package in Sage [MS2011]_
+A compendium on the cluster algebra and quiver package in Sage [MS2011]_
 
 - :ref:`sage.combinat.cluster_algebra_quiver.quiver_mutation_type`
 - :ref:`sage.combinat.cluster_algebra_quiver.quiver`

sage/combinat/cluster_algebra_quiver/cluster_seed.py

@@ -1,28 +1,34 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.graphs sage.modules sage.libs.singular
 r"""
-ClusterSeed
+Cluster seeds
 
-A *cluster seed* is a pair `(B,\mathbf{x})` with `B` being a *skew-symmetrizable* `(n+m) \times n` *-matrix*
-and with `\mathbf{x}` being an `n`-tuple of *independent elements* in the field of rational functions in `n` variables.
+A *cluster seed* is a pair `(B,\mathbf{x})` with `B` being a
+*skew-symmetrizable* `(n+m) \times n` *-matrix* and with `\mathbf{x}` being an
+`n`-tuple of *independent elements* in the field of rational functions in `n`
+variables.
 
 For the compendium on the cluster algebra and quiver package see
 [MS2011]_.
 
-AUTHORS:
-
-- Gregg Musiker: Initial Version
-- Christian Stump: Initial Version
-- Aram Dermenjian (2015-07-01): Updating ability to not rely solely on clusters
-- Jesse Levitt (2015-07-01): Updating ability to not rely solely on clusters
-
 REFERENCES:
 
 - [FZ2007]_
-
 - [BDP2013]_
 
-.. SEEALSO:: For mutation types of cluster seeds, see :meth:`sage.combinat.cluster_algebra_quiver.quiver_mutation_type.QuiverMutationType`. Cluster seeds are closely related to :meth:`sage.combinat.cluster_algebra_quiver.quiver.ClusterQuiver`.
+.. SEEALSO::
+
+    For mutation types of cluster seeds, see
+    :meth:`sage.combinat.cluster_algebra_quiver.quiver_mutation_type.QuiverMutationType`.
+    Cluster seeds are closely related to
+    :meth:`sage.combinat.cluster_algebra_quiver.quiver.ClusterQuiver`.
+
+AUTHORS:
+
+- Gregg Musiker: initial version
+- Christian Stump: initial version
+- Aram Dermenjian (2015-07-01): updating ability to not rely solely on clusters
+- Jesse Levitt (2015-07-01): updating ability to not rely solely on clusters
 """
 
 # ****************************************************************************

sage/combinat/cluster_algebra_quiver/interact.py

@@ -1,4 +1,8 @@
 # sage_setup: distribution = sagemath-graphs
+r"""
+Interactive window for cluster seed mutations
+"""
+
 import ipywidgets as widgets
 from sage.misc.latex import latex
 from sage.repl.rich_output.pretty_print import pretty_print

sage/combinat/designs/MOLS_handbook_data.py

@@ -1,11 +1,11 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Known lower bounds on the number of Mutually Orthogonal Latin
-Squares (MOLS) of a given size.
+Bounds on the number of mutually orthogonal Latin squares
 
-This module consists (almost) entirely of an internal, constant tuple
-of python integers corresponding to Table 3.87 in the Handbook of
-Combinatorial Designs, 2nd edition, by Colbourn and Dinitz. One public
+This module contains known lower bounds on the number of mutually orthogonal
+Latin squares (MOLS) of a given size, and consists (almost) entirely of an
+internal, constant tuple of Python integers corresponding to Table 3.87 in the
+Handbook of Combinatorial Designs, 2nd edition, by Colbourn and Dinitz. One public
 function, :func:`lower_bound`, is provided to access it.
 
 Make sure we have all of the entries::

sage/combinat/designs/bibd.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Balanced Incomplete Block Designs (BIBD)
+Balanced incomplete block designs (BIBD)
 
 This module gathers everything related to Balanced Incomplete Block Designs. One can build a
 BIBD (or check that it can be built) with :func:`balanced_incomplete_block_design`::

sage/combinat/designs/covering_array.py

@@ -1,13 +1,13 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Covering Arrays (CA)
+Covering arrays
 
-A Covering Array, denoted `CA(N;t,k,v)`, is an `N` by `k` array with
+A covering array, denoted `CA(N;t,k,v)`, is an `N` by `k` array with
 entries from a set of `v` elements with the property that in every
 selection of `t` columns, every sequence of `t` elements appears in at
 least one row.
 
-An Orthogonal Array, denoted `OA(N;t,k,v)` is a covering array with the
+An orthogonal array, denoted `OA(N;t,k,v)` is a covering array with the
 property that every sequence of `t`-elements appears in exactly one row.
 (See :mod:`sage.combinat.designs.orthogonal_arrays`).
 

sage/combinat/designs/difference_matrices.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.rings.finite_rings
 r"""
-Difference Matrices
+Difference matrices
 
 This module gathers code related to difference matrices. One can build those
 objects (or know if they can be built) with :func:`difference_matrix`::

sage/combinat/designs/ext_rep.py

@@ -1,13 +1,13 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-External Representations of Block Designs
+External representations of block designs
 
-The "ext_rep" module is an API to the abstract tree represented by
+This module is an API to the abstract tree represented by
 an XML document containing the External Representation of a list of
 block designs. The module also provides the related I/O operations for
-reading/writing ext-rep files or data. The parsing is based on expat.
+reading/writing ``ext-rep`` files or data. The parsing is based on expat.
 
-This is a modified form of the module ext_rep.py (version 0.8)
+This is a modified form of the module ``ext_rep.py`` (version 0.8)
 written by Peter Dobcsanyi [Do2009]_ peter@designtheory.org.
 
 .. TODO::
@@ -16,12 +16,9 @@ written by Peter Dobcsanyi [Do2009]_ peter@designtheory.org.
     information about things like automorphism groups, transitivity, cycle type
     representatives, etc, but none of this data is made available through the
     current implementation.
-
-Functions
----------
 """
 
-###########################################################################
+# ***********************************************************************
 # This software is released under the terms of the GNU General Public
 # License, version 2 or above (your choice). For details on licensing,
 # see the accompanying documentation.
@@ -29,9 +26,9 @@ Functions
 # This is a modified form of the module ext_rep.py (version 0.8)
 # written by Peter Dobcsanyi peter@designtheory.org.
 #
-# Copyright 2004 by Peter Dobcsanyi peter@designtheory.org, and copyright
-# 2009 Carlo Hamalainen carlo.hamalainen@gmail.com
-###########################################################################
+# Copyright 2004 Peter Dobcsanyi peter@designtheory.org
+#           2009 Carlo Hamalainen carlo.hamalainen@gmail.com
+# ***********************************************************************
 
 import sys
 import xml.parsers.expat
@@ -598,7 +595,6 @@ def _encode_attribute(string):
         sage: _encode_attribute('E')
         'E'
     """
-
     if pattern_integer.match(string):
         return int(string)
     elif pattern_decimal.match(string):
@@ -611,8 +607,7 @@ class XTree:
     '''
     A lazy class to wrap a rooted tree representing an XML document.
     The tree's nodes are tuples of the structure:
-
-        (name, {dictionary of attributes}, [list of children])
+    (name, {dictionary of attributes}, [list of children])
 
     Methods and services of an XTree object ``t``:
 

sage/combinat/designs/group_divisible_designs.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.rings.finite_rings
 r"""
-Group-Divisible Designs (GDD)
+Group-divisible designs (GDD)
 
 This module gathers everything related to Group-Divisible Designs. The
 constructions defined here can be accessed through ``designs.<tab>``::

sage/combinat/designs/latin_squares.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.modules
 r"""
-Mutually Orthogonal Latin Squares (MOLS)
+Mutually orthogonal Latin squares (MOLS)
 
 The main function of this module is :func:`mutually_orthogonal_latin_squares`
 and can be can be used to generate MOLS (or check that they exist)::

sage/combinat/designs/resolvable_bibd.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.rings.finite_rings
 r"""
-Resolvable Balanced Incomplete Block Design (RBIBD)
+Resolvable balanced incomplete block design (RBIBD)
 
 This module contains everything related to resolvable Balanced Incomplete Block
 Designs. The constructions implemented here can be obtained through the

sage/combinat/designs/steiner_quadruple_systems.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Steiner Quadruple Systems
+Steiner quadruple systems
 
 A Steiner Quadruple System on `n` points is a family `SQS_n \subset \binom {[n]}
 4` of `4`-sets, such that any set `S\subset [n]` of size three is a subset of

sage/combinat/finite_state_machine_generators.py

@@ -1,9 +1,9 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.graphs sage.modules
 r"""
-Common Automata and Transducers (Finite State Machines Generators)
+Common automata and transducers (finite state machines generators)
 
-Automata and Transducers in Sage can be built through the
+Automata and transducers in Sage can be built through the
 :class:`automata <AutomatonGenerators>`
 and :class:`transducers <TransducerGenerators>` objects, respectively.
 It contains generators for

sage/combinat/graph_path.py

@@ -1,8 +1,8 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Paths in Directed Acyclic Graphs
+Paths in directed acyclic graphs
 """
-#*****************************************************************************
+# ****************************************************************************
 #       Copyright (C) 2007 Mike Hansen <mhansen@gmail.com>,
 #
 #  Distributed under the terms of the GNU General Public License (GPL)
@@ -15,7 +15,7 @@ Paths in Directed Acyclic Graphs
 #  The full text of the GPL is available at:
 #
 #                  http://www.gnu.org/licenses/
-#*****************************************************************************
+# ****************************************************************************
 
 from sage.categories.finite_enumerated_sets import FiniteEnumeratedSets
 from sage.structure.parent import Parent

sage/combinat/ordered_tree.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 """
-Ordered Rooted Trees
+Ordered rooted trees
 
 AUTHORS:
 

sage/combinat/posets/cartesian_product.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 """
-Cartesian products of Posets
+Cartesian products of posets
 
 AUTHORS:
 

sage/combinat/posets/d_complete.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.combinat sage.modules
 r"""
-D-Complete Posets
+D-complete posets
 
 AUTHORS:
 

sage/combinat/posets/forest.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Forest Posets
+Forest posets
 
 AUTHORS:
 

sage/combinat/posets/incidence_algebras.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.modules
 r"""
-Incidence Algebras
+Incidence algebras
 """
 # ****************************************************************************
 #       Copyright (C) 2014 Travis Scrimshaw <tscrim at ucdavis.edu>

sage/combinat/posets/linear_extensions.py

@@ -1,16 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Linear Extensions of Posets
-
-This module defines two classes:
-
-- :class:`LinearExtensionOfPoset`
-- :class:`LinearExtensionsOfPoset`
-- :class:`LinearExtensionsOfPosetWithHooks`
-- :class:`LinearExtensionsOfForest`
-
-Classes and methods
--------------------
+Linear extensions of posets
 """
 # ****************************************************************************
 #       Copyright (C) 2012 Anne Schilling <anne at math.ucdavis.edu>

sage/combinat/posets/moebius_algebra.py

@@ -1,7 +1,7 @@
 # sage_setup: distribution = sagemath-graphs
 # sage.doctest: needs sage.modules
 r"""
-Möbius Algebras
+Möbius algebras
 """
 # ****************************************************************************
 #       Copyright (C) 2014 Travis Scrimshaw <tscrim at ucdavis.edu>,

sage/combinat/rooted_tree.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Rooted (Unordered) Trees
+Rooted (unordered) trees
 
 AUTHORS: