passagemath-glpk 10.6.39__cp312-cp312-win_amd64.whl

sage/numerical/backends/glpk_graph_backend.pyx

@@ -0,0 +1,1346 @@
+# sage_setup: distribution = sagemath-glpk
+# sage.doctest: needs sage.graphs
+"""
+GLPK Backend for access to GLPK graph functions
+
+AUTHORS:
+
+- Christian Kuper (2012-11): Initial implementation
+
+Methods index
+-------------
+
+**Graph creation and modification operations:**
+
+.. csv-table::
+    :class: contentstable
+    :widths: 30, 70
+    :delim: |
+
+    :meth:`~GLPKGraphBackend.add_vertex`          | Add an isolated vertex to the graph.
+    :meth:`~GLPKGraphBackend.add_vertices`        | Add vertices from an iterable container of vertices.
+    :meth:`~GLPKGraphBackend.set_vertex_demand`   | Set the vertex parameters.
+    :meth:`~GLPKGraphBackend.set_vertices_demand` | Set the parameters of selected vertices.
+    :meth:`~GLPKGraphBackend.get_vertex`          | Return a specific vertex as a dictionary Object.
+    :meth:`~GLPKGraphBackend.get_vertices`        | Return a dictionary of the dictionaries associated to each vertex.
+    :meth:`~GLPKGraphBackend.vertices`            | Return a ``list`` of all vertices.
+    :meth:`~GLPKGraphBackend.delete_vertex`       | Remove a vertex from the graph.
+    :meth:`~GLPKGraphBackend.delete_vertices`     | Remove vertices from the graph.
+    :meth:`~GLPKGraphBackend.add_edge`            | Add an edge between vertices ``u`` and ``v``.
+    :meth:`~GLPKGraphBackend.add_edges`           | Add edges to the graph.
+    :meth:`~GLPKGraphBackend.get_edge`            | Return an edge connecting two vertices.
+    :meth:`~GLPKGraphBackend.edges`               | Return a ``list`` of all edges in the graph.
+    :meth:`~GLPKGraphBackend.delete_edge`         | Delete an edge from the graph.
+    :meth:`~GLPKGraphBackend.delete_edges`        | Delete edges from the graph.
+
+**Graph writing operations:**
+
+.. csv-table::
+    :class: contentstable
+    :widths: 30, 70
+    :delim: |
+
+    :meth:`~GLPKGraphBackend.write_graph`    | Write the graph to a plain text file.
+    :meth:`~GLPKGraphBackend.write_ccdata`   | Write the graph to a text file in DIMACS format.
+    :meth:`~GLPKGraphBackend.write_mincost`  | Write the mincost flow problem data to a text file in DIMACS format.
+    :meth:`~GLPKGraphBackend.write_maxflow`  | Write the maximum flow problem data to a text file in DIMACS format.
+
+**Network optimization operations:**
+
+.. csv-table::
+    :class: contentstable
+    :widths: 30, 70
+    :delim: |
+
+    :meth:`~GLPKGraphBackend.mincost_okalg`  | Find solution to the mincost problem with the out-of-kilter algorithm.
+    :meth:`~GLPKGraphBackend.maxflow_ffalg`  | Find solution to the maxflow problem with Ford-Fulkerson algorithm.
+    :meth:`~GLPKGraphBackend.cpp`            | Solve the critical path problem of a project network.
+
+Classes and methods
+-------------------
+"""
+
+#*****************************************************************************
+#       Copyright (C) 2012 Christian Kuper <christian.kuper@t-online.de>
+#
+# This program is free software: you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation, either version 2 of the License, or
+# (at your option) any later version.
+#                  http://www.gnu.org/licenses/
+#*****************************************************************************
+
+from cysignals.memory cimport check_allocarray, sig_free
+
+from sage.cpython.string cimport str_to_bytes, char_to_str
+from sage.cpython.string import FS_ENCODING
+from sage.libs.glpk.constants cimport *
+from sage.libs.glpk.graph cimport *
+from sage.numerical.mip import MIPSolverException
+
+cdef class GLPKGraphBackend():
+    """
+    GLPK Backend for access to GLPK graph functions.
+
+    The constructor can either be called without arguments (which results in an
+    empty graph) or with arguments to read graph data from a file.
+
+    INPUT:
+
+    - ``data`` -- a filename or a :class:`Graph` object
+
+    - ``format`` -- when ``data`` is a filename, specifies the format of the
+      data read from a file.  The ``format`` parameter is a string and can take
+      values as described in the table below.
+
+    **Format parameters:**
+
+    .. list-table::
+     :widths: 10 70
+
+     * - ``plain``
+
+       - Read data from a plain text file containing the following information:
+
+           | nv na
+           | i[1] j[1]
+           | i[2] j[2]
+           | . . .
+           | i[na] j[na]
+
+         where:
+
+         * nv is the number of vertices (nodes);
+
+         * na is the number of arcs;
+
+         * i[k], k = 1, . . . , na, is the index of tail vertex of arc k;
+
+         * j[k], k = 1, . . . , na, is the index of head vertex of arc k.
+
+
+     * - ``dimacs``
+
+       - Read data from a plain ASCII text file in DIMACS format.
+         A description of the DIMACS format can be found at
+         http://dimacs.rutgers.edu/Challenges/.
+
+     * - ``mincost``
+
+       - Reads the mincost flow problem data from a text file in DIMACS format
+
+     * - ``maxflow``
+
+       - Reads the maximum flow problem data from a text file in DIMACS format
+
+    .. NOTE::
+
+        When ``data`` is a :class:`Graph`, the following restrictions are
+        applied.
+
+            * vertices -- the value of the demand of each vertex (see
+              :meth:`set_vertex_demand`) is obtained from the numerical
+              value associated with the key "rhs" if it is a dictionary.
+
+            * edges -- The edge values used in the algorithms are read from the
+              edges labels (and left undefined if the edge labels are equal to
+              ``None``). To be defined, the labels must be dictionary objects with
+              keys "low", "cap" and "cost". See :meth:`get_edge` for details.
+
+    EXAMPLES:
+
+    The following example creates an empty graph::
+
+        sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+        sage: gbe = GLPKGraphBackend()
+
+    The following example creates an empty graph, adds some data, saves the data
+    to a file and loads it::
+
+        sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+        sage: gbe = GLPKGraphBackend()
+        sage: gbe.add_vertices([None, None])
+        ['0', '1']
+        sage: a = gbe.add_edge('0', '1')
+        sage: import tempfile
+        sage: with tempfile.NamedTemporaryFile() as f:
+        ....:     _ = gbe.write_graph(f.name)
+        ....:     gbe1 = GLPKGraphBackend(f.name, "plain")
+        Writing graph to ...
+        4 lines were written
+        Reading graph from ...
+        Graph has 2 vertices and 1 edge
+        3 lines were read
+
+    The following example imports a Sage ``Graph`` and then uses it to solve a
+    maxflow problem::
+
+        sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+        sage: g = graphs.PappusGraph()
+        sage: for ed in g.edges(sort=False):
+        ....:     g.set_edge_label(ed[0], ed[1], {"cap":1})
+        sage: gbe = GLPKGraphBackend(g)
+        sage: gbe.maxflow_ffalg('1', '2')
+        3.0
+    """
+
+    def __cinit__(self, data=None, format="plain"):
+        """
+        Constructor.
+
+        The constructor can either be called without arguments creating an empty
+        graph or with arguments to read graph data from a file or a Sage
+        :class:`Graph`. See documentation of :class:`GLPKGraphBackend` for
+        details.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+        """
+
+        from sage.graphs.graph import Graph
+
+        self.graph = <glp_graph*> glp_create_graph(sizeof(c_v_data),
+                       sizeof(c_a_data))
+
+        if self.graph is NULL:
+            raise MemoryError("Error allocating memory.")
+
+        self.s = 1
+        self.t = 1
+
+        if isinstance(data, str):
+            fname = str_to_bytes(data, FS_ENCODING, 'surrogateescape')
+            res = 0
+            if format == "plain":
+                res = glp_read_graph(self.graph, fname)
+            elif format == "dimacs":
+                res = glp_read_ccdata(self.graph, 0, fname)
+            elif format == "mincost":
+                res = glp_read_mincost(self.graph, 0, 0, sizeof(double),
+                   sizeof(double) + sizeof(double), fname)
+            elif format == "maxflow":
+                res = glp_read_maxflow(self.graph, &self.s, &self.t,
+                   sizeof(double), fname)
+            if res != 0:
+                raise IOError("Could not read graph from file %s" % (fname))
+
+        elif isinstance(data, Graph):
+            self.__add_vertices_sage(data)
+            self.__add_edges_sage(data)
+        else:
+            ValueError("Input data is not supported")
+
+    cpdef add_vertex(self, name=None):
+        """
+        Add an isolated vertex to the graph.
+
+        If the vertex already exists, nothing is done.
+
+        INPUT:
+
+        - ``name`` -- string of max 255 chars length. If no name is
+          specified, then the vertex will be represented by the string
+          representation of the ID of the vertex or - if this already exists -
+          a string representation of the least integer not already representing
+          a vertex.
+
+        OUTPUT:
+
+        If no ``name`` is passed as an argument, the new vertex name is
+        returned. ``None`` otherwise.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: gbe.add_vertex()
+            '0'
+            sage: gbe.add_vertex("2")
+            sage: gbe.add_vertex()
+            '1'
+        """
+        cdef int n
+        cdef vn_t = 0
+
+        if name is not None and self._find_vertex(name) >= 0:
+            return None
+
+        cdef int vn = glp_add_vertices(self.graph, 1)
+
+        if name is not None:
+            glp_set_vertex_name(self.graph, vn, str_to_bytes(name))
+            return None
+
+        else:
+            s = str(vn - 1)
+            n = self._find_vertex(s)
+
+            # This is costly, but hopefully will not happen often.
+            while n >= 0:
+                vn_t += 1
+                s = str(vn_t - 1)
+                n = self._find_vertex(s)
+
+            glp_set_vertex_name(self.graph, vn, str_to_bytes(s))
+            return s
+
+    cpdef __add_vertices_sage(self, g):
+        """
+        Add vertices to the GLPK Graph.
+
+        This function is only used when importing a
+        :class:`~sage.graphs.generic_graph.GenericGraph` object.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: g = graphs.PappusGraph()
+            sage: for ed in g.edges(sort=False):
+            ....:     g.set_edge_label(ed[0], ed[1], {"cap":1})
+            sage: gbe = GLPKGraphBackend(g)
+            sage: gbe.maxflow_ffalg('1', '2')
+            3.0
+        """
+        cdef int n
+        cdef int i
+        cdef double rhs
+        cdef glp_vertex* vert
+
+        verts = g.vertices(sort=True)
+        n = len(verts)
+        if n < 1:
+            raise ValueError("Graph must contain vertices")
+
+        glp_add_vertices(self.graph, n)
+
+        for i in range(n):
+            vert = self.graph.v[i+1]
+            s = str(verts[i])
+            glp_set_vertex_name(self.graph, i + 1, str_to_bytes(s))
+
+            if g.get_vertex(verts[i]) is not None:
+                try:
+                    (<c_v_data *>vert.data).rhs = g.get_vertex(verts[i])["rhs"]
+                except AttributeError:
+                    pass
+
+        glp_create_v_index(self.graph)
+
+    cpdef list add_vertices(self, vertices):
+        """
+        Add vertices from an iterable container of vertices.
+
+        Vertices that already exist in the graph will not be added again.
+
+        INPUT:
+
+        - ``vertices`` -- iterator of vertex labels (string); a label can be
+          ``None``
+
+        OUTPUT:
+
+        Generated names of new vertices if there is at least one ``None`` value
+        present in ``vertices``. ``None`` otherwise.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: vertices = [None for i in range(3)]
+            sage: gbe.add_vertices(vertices)
+            ['0', '1', '2']
+            sage: gbe.add_vertices(['A', 'B', None])
+            ['5']
+            sage: gbe.add_vertices(['A', 'B', 'C'])
+            sage: gbe.vertices()
+            ['0', '1', '2', 'A', 'B', '5', 'C']
+
+        TESTS::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: gbe.add_vertices([None, None, None, '1'])
+            ['0', '2', '3']
+        """
+
+        # We do not want to have [None,None,None,1] as input as a vertex named
+        # "1" would be created twice (a first time when adding a 'None' vertex,
+        # and a second time when reading the last item of the list).
+        nonecount = 0
+        for v in vertices:
+            if v is None:
+                nonecount += 1
+            else:
+                self.add_vertex(v)
+
+        if nonecount:
+            return [self.add_vertex() for i in range(nonecount)]
+        else:
+            return None
+
+    cpdef set_vertex_demand(self, vertex, demand):
+        """
+        Set the demand of the vertex in a mincost flow algorithm.
+
+        INPUT:
+
+        - ``vertex`` -- name of the vertex
+
+        - ``demand`` -- the numerical value representing demand of the vertex in
+          a mincost flow algorithm (it could be for instance `-1` to represent a
+          sink, or `1` to represent a source and `0` for a neutral vertex). This
+          can either be an ``int`` or ``float`` value.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: vertices = [None for i in range(3)]
+            sage: gbe.add_vertices(vertices)
+            ['0', '1', '2']
+            sage: gbe.set_vertex_demand('0', 2)
+            sage: gbe.get_vertex('0')['rhs']
+            2.0
+            sage: gbe.set_vertex_demand('3', 2)
+            Traceback (most recent call last):
+            ...
+            KeyError: 'Vertex 3 does not exist.'
+        """
+        cdef int n = self._find_vertex(vertex)
+
+        if n < 0:
+            raise KeyError("Vertex " + vertex + " does not exist.")
+
+        cdef glp_vertex* vert = self.graph.v[n+1]
+        cdef double val = demand
+        (<c_v_data *>vert.data).rhs = val
+
+    cpdef set_vertices_demand(self, list pairs):
+        """
+        Set the parameters of selected vertices.
+
+        INPUT:
+
+        - ``pairs`` -- list of pairs ``(vertex, demand)`` associating a demand
+          to each vertex. For more information, see the documentation of
+          :meth:`set_vertex_demand`.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: vertices = [None for i in range(3)]
+            sage: gbe.add_vertices(vertices)
+            ['0', '1', '2']
+            sage: gbe.set_vertices_demand([('0', 2), ('1', 3), ('3', 4)])
+            sage: sorted(gbe.get_vertex('1').items())
+            [('cut', 0), ('es', 0.0), ('ls', 0.0), ('pi', 0.0), ('rhs', 3.0)]
+        """
+
+        for v, param in pairs:
+            try:
+                self.set_vertex_demand(v, param)
+            except KeyError:
+                pass
+
+    cpdef dict get_vertex(self, vertex):
+        """
+        Return a specific vertex as a dictionary Object.
+
+        INPUT:
+
+        - ``vertex`` -- the vertex label as string
+
+        OUTPUT:
+
+        The vertex as a dictionary object or ``None`` if the vertex does not
+        exist. The dictionary contains the values used or created by the different
+        algorithms. The values associated with the keys following keys contain:
+
+            * "rhs"  -- The supply / demand value the vertex (mincost alg)
+            * "pi"   -- The node potential (mincost alg)
+            * "cut"  -- The cut flag of the vertex (maxflow alg)
+            * "es"   -- The earliest start of task (cpp alg)
+            * "ls"   -- The latest start of task (cpp alg)
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: verts = ["A", "B", "C", "D"]
+            sage: gbe.add_vertices(verts)
+            sage: sorted(gbe.get_vertex("A").items())
+            [('cut', 0), ('es', 0.0), ('ls', 0.0), ('pi', 0.0), ('rhs', 0.0)]
+            sage: gbe.get_vertex("F") is None
+            True
+        """
+
+        cdef int i = self._find_vertex(vertex)
+        if i < 0:
+            return None
+
+        cdef glp_vertex* vert = self.graph.v[i+1]
+        cdef c_v_data * vdata = <c_v_data *> vert.data
+
+        return {
+            "rhs": vdata.rhs,
+            "pi": vdata.pi,
+            "cut": vdata.cut,
+            "es": vdata.es,
+            "ls": vdata.ls
+            }
+
+    cpdef dict get_vertices(self, verts):
+        """
+        Return a dictionary of the dictionaries associated to each vertex.
+
+        INPUT:
+
+        - ``verts`` -- iterable container of vertices
+
+        OUTPUT:
+
+        A list of pairs ``(vertex, properties)`` where ``properties`` is a
+        dictionary containing the numerical values associated with a vertex. For
+        more information, see the documentation of
+        :meth:`GLPKGraphBackend.get_vertex`.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: verts = ['A', 'B']
+            sage: gbe.add_vertices(verts)
+            sage: sorted(gbe.get_vertices(verts)['B'].items())
+            [('cut', 0), ('es', 0.0), ('ls', 0.0), ('pi', 0.0), ('rhs', 0.0)]
+            sage: gbe.get_vertices(["C", "D"])
+            {}
+        """
+        vl = [(v, self.get_vertex(v)) for v in verts]
+        return dict([(v, p) for v, p in vl if p is not None])
+
+    cpdef list vertices(self):
+        """
+        Return the list of all vertices.
+
+        .. NOTE::
+
+           Changing elements of the ``list`` will not change anything in the
+           the graph.
+
+        .. NOTE::
+
+           If a vertex in the graph does not have a name / label it will appear
+           as ``None`` in the resulting ``list``.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: verts = ["A", "B", "C"]
+            sage: gbe.add_vertices(verts)
+            sage: a = gbe.vertices(); a
+            ['A', 'B', 'C']
+            sage: a.pop(0)
+            'A'
+            sage: gbe.vertices()
+            ['A', 'B', 'C']
+        """
+
+        return [char_to_str(self.graph.v[i+1].name)
+                if self.graph.v[i+1].name is not NULL else None
+                for i in range(self.graph.nv)]
+
+    cpdef add_edge(self, u, v, dict params=None):
+        """
+        Add an edge between vertices ``u`` and ``v``.
+
+        Allows adding an edge and optionally providing parameters used by the
+        algorithms. If a vertex does not exist it is created.
+
+        INPUT:
+
+        - ``u`` -- the name (as string) of the tail vertex
+
+        - ``v`` -- the name (as string) of the head vertex
+
+        - ``params`` -- an optional dictionary containing the edge parameters used
+          for the algorithms. The following keys are used:
+
+            * ``low`` -- the minimum flow through the edge
+
+            * ``cap`` -- the maximum capacity of the edge
+
+            * ``cost`` -- the cost of transporting one unit through the edge
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: gbe.add_edge("A", "B", {"low":0.0, "cap":10.0, "cost":5})
+            sage: gbe.vertices()
+            ['A', 'B']
+            sage: for ed in gbe.edges():
+            ....:     print((ed[0], ed[1], ed[2]['cap'], ed[2]['cost'], ed[2]['low']))
+            ('A', 'B', 10.0, 5.0, 0.0)
+            sage: gbe.add_edge("B", "C", {"low":0.0, "cap":10.0, "cost":'5'})
+            Traceback (most recent call last):
+            ...
+            TypeError: Invalid edge parameter.
+        """
+        cdef int i = self._find_vertex(u)
+        cdef int j = self._find_vertex(v)
+
+        if i < 0:
+            self.add_vertex(u)
+            i = self._find_vertex(u)
+
+        if j < 0:
+            self.add_vertex(v)
+            j = self._find_vertex(v)
+
+        cdef glp_arc *a
+
+        a = glp_add_arc(self.graph, i+1, j+1)
+
+        if params is not None:
+            try:
+                if "low" in params:
+                    (<c_a_data *>a.data).low = params["low"]
+                if "cap" in params:
+                    (<c_a_data *>a.data).cap = params["cap"]
+                if "cost" in params:
+                    (<c_a_data *>a.data).cost = params["cost"]
+            except TypeError:
+                glp_del_arc(self.graph, a)
+                raise TypeError("Invalid edge parameter.")
+
+    cpdef list add_edges(self, edges):
+        """
+        Add edges to the graph.
+
+        INPUT:
+
+        - ``edges`` -- an iterable container of pairs of the form ``(u, v)``,
+          where ``u`` is name (as string) of the tail vertex and ``v`` is the
+          name (as string) of the head vertex or an iterable container of
+          triples of the form ``(u, v, params)`` where params is a dictionary as
+          described in ``add_edge``.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: edges = [("A", "B", {"low":0.0, "cap":10.0, "cost":5})]
+            sage: edges.append(("B", "C"))
+            sage: gbe.add_edges(edges)
+            sage: for ed in gbe.edges():
+            ....:     print((ed[0], ed[1], ed[2]['cap'], ed[2]['cost'], ed[2]['low']))
+            ('A', 'B', 10.0, 5.0, 0.0)
+            ('B', 'C', 0.0, 0.0, 0.0)
+            sage: edges = [("C", "D", {"low":0.0, "cap":10.0, "cost":5})]
+            sage: edges.append(("C", "E", 5))
+            sage: gbe.add_edges(edges)
+            Traceback (most recent call last):
+            ...
+            TypeError: Argument 'params' has incorrect type ...
+            sage: for ed in gbe.edges():
+            ....:     print((ed[0], ed[1], ed[2]['cap'], ed[2]['cost'], ed[2]['low']))
+            ('A', 'B', 10.0, 5.0, 0.0)
+            ('B', 'C', 0.0, 0.0, 0.0)
+            ('C', 'D', 10.0, 5.0, 0.0)
+        """
+        for ed in edges:
+            self.add_edge(*ed)
+
+    cpdef __add_edges_sage(self, g):
+        """
+        Add edges to the Graph.
+
+        This function is only used when importing a ``GenericGraph``.
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: g = graphs.PappusGraph()
+            sage: for ed in g.edges(sort=False):
+            ....:     g.set_edge_label(ed[0], ed[1], {"cap":1})
+            sage: gbe = GLPKGraphBackend(g)
+            sage: gbe.maxflow_ffalg('1', '2')
+            3.0
+        """
+        cdef glp_arc* a
+        cdef int u
+        cdef int v
+        cdef double cost
+        cdef double cap
+        cdef double low
+        cdef int isdirected = g.is_directed()
+
+        for eu, ev, label in g.edges(sort=False):
+            u_name = str(eu)
+            v_name = str(ev)
+            u = glp_find_vertex(self.graph, str_to_bytes(u_name))
+            v = glp_find_vertex(self.graph, str_to_bytes(v_name))
+            if u < 1 or v < 1:
+                raise IndexError(u_name + " or " + v_name + " not found")
+
+            a = glp_add_arc(self.graph, u, v)
+
+            if isinstance(label, dict):
+                if "cost" in label:
+                    cost = label["cost"]
+                    (<c_a_data *>a.data).cost = cost
+                if "cap" in label:
+                    cap = label["cap"]
+                    (<c_a_data *>a.data).cap = cap
+                if "low" in label:
+                    low = label["low"]
+                    (<c_a_data *>a.data).low = low
+
+            if not isdirected:
+                a = glp_add_arc(self.graph, v, u)
+                if isinstance(label, dict):
+                    if "cost" in label:
+                        (<c_a_data *>a.data).cost = cost
+                    if "cap" in label:
+                        (<c_a_data *>a.data).cap = cap
+                    if "low" in label:
+                        (<c_a_data *>a.data).low = low
+
+    cpdef tuple get_edge(self, u, v):
+        """
+        Return an edge connecting two vertices.
+
+        .. NOTE::
+
+           If multiple edges connect the two vertices only the first edge
+           found is returned.
+
+        INPUT:
+
+        - ``u`` -- name (as string) of the tail vertex
+        - ``v`` -- name (as string) of the head vertex
+
+        OUTPUT:
+
+        A ``triple`` describing if edge was found or ``None`` if not. The third
+        value of the triple is a dictionary containing the following edge
+        parameters:
+
+            * ``low`` -- the minimum flow through the edge
+            * ``cap`` -- the maximum capacity of the edge
+            * ``cost`` -- the cost of transporting one unit through the edge
+            * ``x`` -- the actual flow through the edge after solving
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: edges = [("A", "B"), ("A", "C"), ("B", "C")]
+            sage: gbe.add_edges(edges)
+            sage: ed = gbe.get_edge("A", "B")
+            sage: ed[0], ed[1], ed[2]['x']
+            ('A', 'B', 0.0)
+            sage: gbe.get_edge("A", "F") is None
+            True
+        """
+        cdef int i = self._find_vertex(u)
+        cdef int j = self._find_vertex(v)
+
+        if i < 0 or j < 0:
+            return None
+
+        cdef glp_vertex* vert_u = self.graph.v[i+1]
+        cdef glp_vertex* vert_v = self.graph.v[j+1]
+        cdef glp_arc* a = vert_u.out
+        while a is not NULL:
+            if a.head == vert_v:
+                return (u, v, {"low":(<c_a_data *>a.data).low,
+                               "cap":(<c_a_data *>a.data).cap,
+                               "cost":(<c_a_data *>a.data).cost,
+                               "x":(<c_a_data *>a.data).x})
+            a = a.t_next
+
+        return None
+
+    cpdef list edges(self):
+        """
+        Return a ``list`` of all edges in the graph.
+
+        OUTPUT: a ``list`` of ``triples`` representing the edges of the graph
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: edges = [("A", "B", {"low":0.0, "cap":10.0, "cost":5})]
+            sage: edges.append(("B", "C"))
+            sage: gbe.add_edges(edges)
+            sage: for ed in gbe.edges():
+            ....:     print((ed[0], ed[1], ed[2]['cost']))
+            ('A', 'B', 5.0)
+            ('B', 'C', 0.0)
+        """
+
+        cdef int i = 1
+        cdef glp_vertex* vert_u
+        cdef glp_vertex* vert_v
+        cdef glp_arc* a
+        edge_list = []
+
+        while i <= self.graph.nv:
+            vert_u = self.graph.v[i]
+            a = vert_u.out
+            while a is not NULL:
+                vert_v = a.head
+                if vert_u.name is NULL:
+                    u_name = None
+                else:
+                    u_name = char_to_str(vert_u.name)
+                if vert_v.name is NULL:
+                    v_name = None
+                else:
+                    v_name = char_to_str(vert_v.name)
+                edge_list.append((u_name, v_name,
+                              {"low":(<c_a_data *>a.data).low,
+                               "cap":(<c_a_data *>a.data).cap,
+                               "cost":(<c_a_data *>a.data).cost,
+                               "x":(<c_a_data *>a.data).x}))
+                a = a.t_next
+            i += 1
+        return edge_list
+
+    cpdef delete_vertex(self, vert):
+        r"""
+        Removes a vertex from the graph.
+
+        Trying to delete a non existing vertex will raise an exception.
+
+        INPUT:
+
+        - ``vert`` -- the name (as string) of the vertex to delete
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: verts = ["A", "D"]
+            sage: gbe.add_vertices(verts)
+            sage: gbe.delete_vertex("A")
+            sage: gbe.vertices()
+            ['D']
+            sage: gbe.delete_vertex("A")
+            Traceback (most recent call last):
+            ...
+            RuntimeError: Vertex A does not exist.
+        """
+
+        cdef int i = self._find_vertex(vert)
+
+        if i < 0:
+            raise RuntimeError("Vertex %s does not exist." % vert)
+
+        cdef int num[2]
+        num[1] = i + 1
+        cdef int ndel = 1
+
+        glp_del_vertices(self.graph, ndel, num)
+
+    cpdef delete_vertices(self, list verts):
+        r"""
+        Removes vertices from the graph.
+
+        Trying to delete a non existing vertex will raise an exception.
+
+        INPUT:
+
+        - ``verts`` -- iterable container containing names (as string) of the
+          vertices to delete
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: verts = ["A", "B", "C", "D"]
+            sage: gbe.add_vertices(verts)
+            sage: v_d = ["A", "B"]
+            sage: gbe.delete_vertices(v_d)
+            sage: gbe.vertices()
+            ['C', 'D']
+            sage: gbe.delete_vertices(["C", "A"])
+            Traceback (most recent call last):
+            ...
+            RuntimeError: Vertex A does not exist.
+            sage: gbe.vertices()
+            ['C', 'D']
+        """
+
+        verts_val = [self._find_vertex(v) for v in verts]
+        if -1 in verts_val:
+            i = verts_val.index(-1)
+            raise RuntimeError("Vertex %s does not exist." % verts[i])
+
+        cdef int * num = <int *>check_allocarray(len(verts_val) + 1, sizeof(int))
+        cdef int ndel = len(verts_val)
+
+        for i,(v) in enumerate(verts_val):
+            num[i+1] = v+1
+
+        glp_del_vertices(self.graph, ndel, num)
+
+        sig_free(num)
+
+    cpdef delete_edge(self, u, v, dict params=None):
+        """
+        Delete an edge from the graph.
+
+        If an edge does not exist it is ignored.
+
+        INPUT:
+
+        - ``u`` -- the name (as string) of the tail vertex of the edge
+        - ``v`` -- the name (as string) of the tail vertex of the edge
+        - ``params`` -- an optional dictionary containing the edge
+          parameters (see :meth:`add_edge`). If this parameter
+          is not provided, all edges connecting ``u`` and ``v`` are deleted.
+          Otherwise only edges with matching parameters are deleted.
+
+        .. SEEALSO::
+
+            :meth:`delete_edges`
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: edges = [("A", "B", {"low":0.0, "cap":10.0, "cost":5})]
+            sage: edges.append(("A", "B", {"low":0.0, "cap":15.0, "cost":10}))
+            sage: edges.append(("B", "C", {"low":0.0, "cap":20.0, "cost":1}))
+            sage: edges.append(("B", "C", {"low":0.0, "cap":10.0, "cost":20}))
+            sage: gbe.add_edges(edges)
+            sage: gbe.delete_edge("A", "B")
+            sage: gbe.delete_edge("B", "C", {"low":0.0, "cap":10.0, "cost":20})
+            sage: gbe.edges()[0][0], gbe.edges()[0][1], gbe.edges()[0][2]['cost']
+            ('B', 'C', 1.0)
+        """
+
+        cdef int i = self._find_vertex(u)
+        cdef int j = self._find_vertex(v)
+        if i < 0 or j < 0:
+            return
+
+        cdef glp_vertex* vert_u = self.graph.v[i+1]
+        cdef glp_vertex* vert_v = self.graph.v[j+1]
+        cdef glp_arc* a = vert_u.out
+        cdef glp_arc* a2 = a
+
+        cdef double low, cap, cost, x
+
+        if params is not None:
+            if "low" in params:
+                low = params["low"]
+            if "cap" in params:
+                cap = params["cap"]
+            if "cost" in params:
+                cost = params["cost"]
+            if "x" in params:
+                x = params["x"]
+
+        while a is not NULL:
+            a2 = a.t_next
+            if a.head == vert_v and params is None:
+                glp_del_arc(self.graph, a)
+            elif a.head == vert_v:
+                del_it = True
+                if "low" in params:
+                    if (<c_a_data *>a.data).low != low:
+                        del_it = False
+                if "cap" in params:
+                    if (<c_a_data *>a.data).cap != cap:
+                        del_it = False
+                if "cost" in params:
+                    if (<c_a_data *>a.data).cost != cost:
+                        del_it = False
+                if "x" in params:
+                    if (<c_a_data *>a.data).x != x:
+                        del_it = False
+                if del_it:
+                    glp_del_arc(self.graph, a)
+
+            a = a2
+
+    def delete_edges(self, edges):
+        """
+        Delete edges from the graph.
+
+        Non existing edges are ignored.
+
+        INPUT:
+
+        - ``edges`` -- an iterable container of edges
+
+        .. SEEALSO::
+
+            :meth:`delete_edge`
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: edges = [("A", "B", {"low":0.0, "cap":10.0, "cost":5})]
+            sage: edges.append(("A", "B", {"low":0.0, "cap":15.0, "cost":10}))
+            sage: edges.append(("B", "C", {"low":0.0, "cap":20.0, "cost":1}))
+            sage: edges.append(("B", "C", {"low":0.0, "cap":10.0, "cost":20}))
+            sage: gbe.add_edges(edges)
+            sage: gbe.delete_edges(edges[1:])
+            sage: len(gbe.edges())
+            1
+            sage: gbe.edges()[0][0], gbe.edges()[0][1], gbe.edges()[0][2]['cap']
+            ('A', 'B', 10.0)
+        """
+
+        for edge in edges:
+            self.delete_edge(*edge)
+
+    cpdef int _find_vertex(self, name) noexcept:
+        """
+        Return the index of a vertex specified by a name
+
+        INPUT:
+
+        - ``name`` -- name of the vertex
+
+        OUTPUT: the index of the vertex or ``-1`` if the vertex is not found
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: verts = ["A", "B", "C", "D"]
+            sage: gbe.add_vertices(verts)
+            sage: gbe._find_vertex("A")
+            0
+            sage: gbe._find_vertex("F")
+            -1
+        """
+
+        glp_create_v_index(self.graph)
+        return glp_find_vertex(self.graph, str_to_bytes(name)) - 1
+
+    cpdef int write_graph(self, fname) noexcept:
+        r"""
+        Writes the graph to a plain text file
+
+        INPUT:
+
+        - ``fname`` -- full name of the file
+
+        OUTPUT: zero if the operations was successful otherwise nonzero
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: a = gbe.add_edge("0", "1")
+            sage: import tempfile
+            sage: with tempfile.NamedTemporaryFile() as f:
+            ....:     gbe.write_graph(f.name)
+            Writing graph to ...
+            4 lines were written
+            0
+        """
+
+        fname = str_to_bytes(fname, FS_ENCODING, 'surrogateescape')
+        return glp_write_graph(self.graph, fname)
+
+    cpdef int write_ccdata(self, fname) noexcept:
+        r"""
+        Writes the graph to a text file in DIMACS format.
+
+        Writes the data to plain ASCII text file in DIMACS format.
+        A description of the DIMACS format can be found at
+        http://dimacs.rutgers.edu/Challenges/.
+
+        INPUT:
+
+        - ``fname`` -- full name of the file
+
+        OUTPUT: zero if the operations was successful otherwise nonzero
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: a = gbe.add_edge("0", "1")
+            sage: import tempfile
+            sage: with tempfile.NamedTemporaryFile() as f:
+            ....:     gbe.write_ccdata(f.name)
+            Writing graph to ...
+            6 lines were written
+            0
+        """
+
+        fname = str_to_bytes(fname, FS_ENCODING, 'surrogateescape')
+        return glp_write_ccdata(self.graph, 0, fname)
+
+    cpdef int write_mincost(self, fname) noexcept:
+        """
+        Writes the mincost flow problem data to a text file in DIMACS format
+
+        INPUT:
+
+        - ``fname`` -- full name of file
+
+        OUTPUT: zero if successful, otherwise nonzero
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: a = gbe.add_edge("0", "1")
+            sage: import tempfile
+            sage: with tempfile.NamedTemporaryFile() as f:
+            ....:     gbe.write_mincost(f.name)
+            Writing min-cost flow problem data to ...
+            4 lines were written
+            0
+        """
+
+        fname = str_to_bytes(fname, FS_ENCODING, 'surrogateescape')
+        return glp_write_mincost(self.graph, 0, 0, sizeof(double),
+                   sizeof(double) + sizeof(double), fname)
+
+    cpdef double mincost_okalg(self) except -1:
+        r"""
+        Finds solution to the mincost problem with the out-of-kilter algorithm.
+
+        The out-of-kilter algorithm requires all problem data to be integer
+        valued.
+
+        OUTPUT:
+
+        The solution to the mincost problem, i.e. the total cost, if operation
+        was successful.
+
+        .. NOTE::
+
+           This method raises ``MIPSolverException`` exceptions when
+           the solution cannot be computed for any reason (none
+           exists, or the LP solver was not able to find it, etc...)
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: vertices = (35, 50, 40, -45, -20, -30, -30)
+            sage: vs = gbe.add_vertices([None for i in range(len(vertices))])
+            sage: v_dict = {}
+            sage: for i, v in enumerate(vs):
+            ....:     v_dict[v] = vertices[i]
+            sage: gbe.set_vertices_demand(list(v_dict.items()))
+            sage: cost = ((8, 6, 10, 9), (9, 12, 13, 7), (14, 9, 16, 5))
+
+            sage: for i in range(len(cost)):
+            ....:     for j in range(len(cost[0])):
+            ....:         gbe.add_edge(str(i), str(j + len(cost)), {"cost":cost[i][j], "cap":100})
+            sage: gbe.mincost_okalg()
+            1020.0
+            sage: for ed in gbe.edges():
+            ....:     print("{} -> {} {}".format(ed[0], ed[1], ed[2]["x"]))
+            0 -> 6 0.0
+            0 -> 5 25.0
+            0 -> 4 10.0
+            0 -> 3 0.0
+            1 -> 6 0.0
+            1 -> 5 5.0
+            1 -> 4 0.0
+            1 -> 3 45.0
+            2 -> 6 30.0
+            2 -> 5 0.0
+            2 -> 4 10.0
+            2 -> 3 0.0
+        """
+        cdef double graph_sol
+        cdef int status = glp_mincost_okalg(self.graph, 0, 0, sizeof(double),
+              2 * sizeof(double), &graph_sol,
+              3 * sizeof(double), sizeof(double))
+        if status == 0:
+            pass
+        elif status == GLP_ENOPFS:
+            raise MIPSolverException("No (primal) feasible solution exists")
+        elif status == GLP_EDATA:
+            raise MIPSolverException("Unable to start search due to " +
+                                     "problem data")
+        elif status == GLP_ERANGE:
+            raise MIPSolverException("The search was prematurely terminated " +
+                                     "because of integer overflow")
+        elif status == GLP_EFAIL:
+            raise MIPSolverException("An error has been detected" +
+                                     "in the program logic")
+
+        return graph_sol
+
+    cpdef int write_maxflow(self, fname) except -1:
+        """
+        Writes the maximum flow problem data to a text file in DIMACS format.
+
+        INPUT:
+
+        - ``fname`` -- full name of file
+
+        OUTPUT:
+
+        ``Zero`` if successful, otherwise ``nonzero``
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: import tempfile
+            sage: with tempfile.NamedTemporaryFile() as f:
+            ....:     gbe.write_maxflow(f.name)
+            Traceback (most recent call last):
+            ...
+            OSError: Cannot write empty graph
+            sage: gbe.add_vertices([None for i in range(2)])
+            ['0', '1']
+            sage: a = gbe.add_edge('0', '1')
+            sage: gbe.maxflow_ffalg('0', '1')
+            0.0
+            sage: with tempfile.NamedTemporaryFile() as f:
+            ....:     gbe.write_maxflow(f.name)
+            Writing maximum flow problem data to ...
+            6 lines were written
+            0
+        """
+
+        if self.graph.nv <= 0:
+            raise IOError("Cannot write empty graph")
+
+        fname = str_to_bytes(fname, FS_ENCODING, 'surrogateescape')
+        return glp_write_maxflow(self.graph, self.s+1, self.t+1,
+                   sizeof(double), fname)
+
+    cpdef double maxflow_ffalg(self, u=None, v=None) except -1:
+        r"""
+        Finds solution to the maxflow problem with Ford-Fulkerson algorithm.
+
+        INPUT:
+
+        - ``u`` -- name (as string) of the tail vertex; default is ``None``
+        - ``v`` -- name (as string) of the head vertex; default is ``None``
+
+        If ``u`` or ``v`` are ``None``, the currently stored values for the
+        head or tail vertex are used. This behavior is useful when reading
+        maxflow data from a file. When calling this function with values for
+        ``u`` and ``v``, the head and tail vertex are stored for
+        later use.
+
+        OUTPUT: the solution to the maxflow problem, i.e. the maximum flow
+
+        .. NOTE::
+
+            * If the source or sink vertex does not exist, an :exc:`IndexError` is
+              raised.
+
+            * If the source and sink are identical, a :exc:`ValueError` is raised.
+
+            * This method raises ``MIPSolverException`` exceptions when the
+              solution cannot be computed for any reason (none exists, or the
+              LP solver was not able to find it, etc...)
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: v = gbe.add_vertices([None for i in range(5)])
+            sage: edges = ((0, 1, 2), (0, 2, 3), (1, 2, 3), (1, 3, 4),
+            ....:         (3, 4, 1), (2, 4, 2))
+            sage: for a in edges:
+            ....:     edge = gbe.add_edge(str(a[0]), str(a[1]), {"cap":a[2]})
+            sage: gbe.maxflow_ffalg('0', '4')
+            3.0
+            sage: gbe.maxflow_ffalg()
+            3.0
+            sage: gbe.maxflow_ffalg('0', '8')
+            Traceback (most recent call last):
+            ...
+            IndexError: Source or sink vertex does not exist
+        """
+        cdef int s, t
+
+        if u is not None and v is not None:
+            s = self._find_vertex(u)
+            t = self._find_vertex(v)
+        else:
+            s = self.s
+            t = self.t
+
+        if s < 0 or t < 0:
+            raise IndexError("Source or sink vertex does not exist")
+        if s == t:
+            raise ValueError("Source and sink are identical")
+
+        self.s = s
+        self.t = t
+
+        s += 1
+        t += 1
+
+        cdef double graph_sol
+        cdef int status = glp_maxflow_ffalg(self.graph, s, t, sizeof(double),
+                          &graph_sol, 3 * sizeof(double),
+                          4 * sizeof(double))
+        if status == 0:
+            pass
+        elif status == GLP_ENOPFS:
+            raise MIPSolverException("No (primal) feasible solution exists")
+        elif status == GLP_EDATA:
+            raise MIPSolverException("Unable to start search due " +
+                                     "to problem data")
+        elif status == GLP_ERANGE:
+            raise MIPSolverException("The search was prematurely terminated " +
+                                     "because of integer overflow")
+        elif status == GLP_EFAIL:
+            raise MIPSolverException("An error has been detected in the " +
+                                     "program logic")
+
+        return graph_sol
+
+    cpdef double cpp(self) noexcept:
+        r"""
+        Solve the critical path problem of a project network.
+
+        OUTPUT: the length of the critical path of the network
+
+        EXAMPLES::
+
+            sage: from sage.numerical.backends.glpk_graph_backend import GLPKGraphBackend
+            sage: gbe = GLPKGraphBackend()
+            sage: gbe.add_vertices([None for i in range(3)])
+            ['0', '1', '2']
+            sage: gbe.set_vertex_demand('0', 3)
+            sage: gbe.set_vertex_demand('1', 1)
+            sage: gbe.set_vertex_demand('2', 4)
+            sage: a = gbe.add_edge('0', '2')
+            sage: a = gbe.add_edge('1', '2')
+            sage: gbe.cpp()
+            7.0
+            sage: v = gbe.get_vertex('1')
+            sage: 1, v["rhs"], v["es"], v["ls"] # abs tol 1e-6
+            (1, 1.0, 0.0, 2.0)
+        """
+
+        return glp_cpp(self.graph, 0, 2 * sizeof(double),
+                   3 * sizeof(double))
+
+    def __dealloc__(self):
+        """
+        Destructor
+        """
+        if self.graph is not NULL:
+            glp_delete_graph(self.graph)
+        self.graph = NULL