partis-bcr 1.0.1__py3-none-any.whl → 1.0.3__py3-none-any.whl

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Files changed (14) hide show
  1. packages/ham/bcrham +0 -0
  2. {partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/METADATA +1 -1
  3. {partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/RECORD +14 -14
  4. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/cf-alleles.py +0 -0
  5. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/cf-germlines.py +0 -0
  6. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/extract-pairing-info.py +0 -0
  7. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/gctree-run.py +0 -0
  8. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/parse-output.py +0 -0
  9. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/split-loci.py +0 -0
  10. {partis_bcr-1.0.1.data → partis_bcr-1.0.3.data}/scripts/test.py +0 -0
  11. {partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/WHEEL +0 -0
  12. {partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/entry_points.txt +0 -0
  13. {partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/licenses/COPYING +0 -0
  14. {partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/top_level.txt +0 -0
packages/ham/bcrham CHANGED
Binary file
{partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/METADATA RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: partis-bcr
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- Version: 1.0.1
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+ Version: 1.0.3
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  Summary: B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference
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  Home-page: https://github.com/psathyrella/partis
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  Author: Duncan Ralph
{partis_bcr-1.0.1.dist-info → partis_bcr-1.0.3.dist-info}/RECORD RENAMED
@@ -296,16 +296,16 @@ data/substitution-profiles/GSSPs_for_VH_genes_with_at_least_300_lineages.txt,sha
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  data/substitution-profiles/GSSPs_for_VK_genes_with_at_least_300_lineages.txt,sha256=dyMU1R_Izk_ciOVTNWmGL5SQBIKDCCKpxXM6eTGO4Fg,184138
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  data/substitution-profiles/GSSPs_for_VL_genes_with_at_least_300_lineages.txt,sha256=CMFb1gk8MbfaMb6y0_qLLiKErrx866C2EafKRSPesB4,184979
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  data/substitution-profiles/notes.txt,sha256=-DK9E31YovqOWaXR1Q-LL5KFhjVJcSLwXbriajUq1TA,389
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- packages/ham/bcrham,sha256=DwQaLOc_OwKYj9mk3TGVVEqzBGMIl_0lje3SbMrgEYY,874648
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+ packages/ham/bcrham,sha256=4NstZkQgqdF1l_tNemIwuzVyN2zOFsw248qPoPldYWg,1194368
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  packages/ig-sw/src/ig_align/ig-sw,sha256=SNFYfMlvX9s9T64t9fYIB5ugD6cZ016SZVbRhrz5Pro,293464
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- partis_bcr-1.0.1.data/scripts/cf-alleles.py,sha256=AgFLoRfcwuX1InVpE3zG6-unqoCBGOeCTpEl_RZftvU,4723
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- partis_bcr-1.0.1.data/scripts/cf-germlines.py,sha256=8_bq0ue3ALFQ-a7-ntnhkbCaBdQ5mlWtQgNeQP_TvcQ,3135
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- partis_bcr-1.0.1.data/scripts/extract-pairing-info.py,sha256=IGPd4jYpsW3IPgsrxTJrk9jAwUKlb45eX3lOpb8Maos,2941
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- partis_bcr-1.0.1.data/scripts/gctree-run.py,sha256=BfSZCFgqdhUEqVsv2h20o6OkS6KbQgx5tfvBhySRx2U,13950
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- partis_bcr-1.0.1.data/scripts/parse-output.py,sha256=8nrg0ip3XDhme02NCiI45BrSqCNvbRIbKYErD8STk8U,19519
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- partis_bcr-1.0.1.data/scripts/split-loci.py,sha256=K0WXQYtloL5rs46mwvEXUecqT3iG8bbqwNOTNwfpvzY,20704
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- partis_bcr-1.0.1.data/scripts/test.py,sha256=aI-2mLH5WXYVWoS4zateeSgDynDUC_DK9QF-UAEpWms,63609
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- partis_bcr-1.0.1.dist-info/licenses/COPYING,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
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+ partis_bcr-1.0.3.data/scripts/cf-alleles.py,sha256=AgFLoRfcwuX1InVpE3zG6-unqoCBGOeCTpEl_RZftvU,4723
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+ partis_bcr-1.0.3.data/scripts/cf-germlines.py,sha256=8_bq0ue3ALFQ-a7-ntnhkbCaBdQ5mlWtQgNeQP_TvcQ,3135
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+ partis_bcr-1.0.3.data/scripts/extract-pairing-info.py,sha256=IGPd4jYpsW3IPgsrxTJrk9jAwUKlb45eX3lOpb8Maos,2941
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+ partis_bcr-1.0.3.data/scripts/gctree-run.py,sha256=BfSZCFgqdhUEqVsv2h20o6OkS6KbQgx5tfvBhySRx2U,13950
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+ partis_bcr-1.0.3.data/scripts/parse-output.py,sha256=8nrg0ip3XDhme02NCiI45BrSqCNvbRIbKYErD8STk8U,19519
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+ partis_bcr-1.0.3.data/scripts/split-loci.py,sha256=K0WXQYtloL5rs46mwvEXUecqT3iG8bbqwNOTNwfpvzY,20704
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+ partis_bcr-1.0.3.data/scripts/test.py,sha256=aI-2mLH5WXYVWoS4zateeSgDynDUC_DK9QF-UAEpWms,63609
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+ partis_bcr-1.0.3.dist-info/licenses/COPYING,sha256=jOtLnuWt7d5Hsx6XXB2QxzrSe2sWWh3NgMfFRetluQM,35147
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  python/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  python/alleleclusterer.py,sha256=x50E_lJMlKPc-CPkdkM1qe4AvVi-mkDJ1cBDxs5L-ms,30551
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  python/allelefinder.py,sha256=SgJjopk5ivLOcmTumsWq5PZ05aPZ6zQyjTd1fxeRjaM,80402
@@ -350,8 +350,8 @@ python/vrc01.py,sha256=f3PpRV9ZOU9kxJCKdoJlP9wvKB7FEgMM8WoNpevsEOE,10813
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  python/waterer.py,sha256=sPBsJchmK2EO3M5UCwZq_S5mRV3eYFuIZoite4Js62g,109955
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  python/cache/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
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  python/cache/cached_uncertainties.py,sha256=GNs18AG8ROdDg0OOrcArsU73Ev1U8k5Gsnf79WndHG8,4257821
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- partis_bcr-1.0.1.dist-info/METADATA,sha256=ZeWObwx6zCF4IYn1nWLwcMLHh_5_l-wadsojZX2A6ZM,4976
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- partis_bcr-1.0.1.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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- partis_bcr-1.0.1.dist-info/entry_points.txt,sha256=Q-AkAQ91YwiKNHruS32ACdY4_IQdpZhpij2EuVDmdnM,44
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- partis_bcr-1.0.1.dist-info/top_level.txt,sha256=J-z0poNcsv31IHB413--iOY8LoHBKiTHeybHX3abokI,7
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- partis_bcr-1.0.1.dist-info/RECORD,,
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+ partis_bcr-1.0.3.dist-info/METADATA,sha256=WgPvtDT5zsXki4qdT_NI9zqOu-lFgEj5m0VYS9kzycA,4976
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+ partis_bcr-1.0.3.dist-info/WHEEL,sha256=_zCd3N1l69ArxyTb8rzEoP9TpbYXkqRFSNOD5OuxnTs,91
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+ partis_bcr-1.0.3.dist-info/entry_points.txt,sha256=Q-AkAQ91YwiKNHruS32ACdY4_IQdpZhpij2EuVDmdnM,44
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+ partis_bcr-1.0.3.dist-info/top_level.txt,sha256=J-z0poNcsv31IHB413--iOY8LoHBKiTHeybHX3abokI,7
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+ partis_bcr-1.0.3.dist-info/RECORD,,