partis-bcr 1.0.12.post1.dev2__cp312-cp312-manylinux1_x86_64.whl → 1.0.12.post1.dev4__cp312-cp312-manylinux1_x86_64.whl
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- packages/bpp/lib/libbpp-core.a +0 -0
- packages/bpp/lib/libbpp-core.so +0 -0
- packages/bpp/lib/libbpp-core.so.2 +0 -0
- packages/bpp/lib/libbpp-core.so.2.0.3 +0 -0
- packages/bpp/lib/libbpp-phyl.a +0 -0
- packages/bpp/lib/libbpp-phyl.so +0 -0
- packages/bpp/lib/libbpp-phyl.so.9 +0 -0
- packages/bpp/lib/libbpp-phyl.so.9.1.3 +0 -0
- packages/bpp/lib/libbpp-seq.a +0 -0
- packages/bpp/lib/libbpp-seq.so +0 -0
- packages/bpp/lib/libbpp-seq.so.9 +0 -0
- packages/bpp/lib/libbpp-seq.so.9.1.3 +0 -0
- {partis_bcr-1.0.12.post1.dev2.dist-info → partis_bcr-1.0.12.post1.dev4.dist-info}/METADATA +1 -1
- {partis_bcr-1.0.12.post1.dev2.dist-info → partis_bcr-1.0.12.post1.dev4.dist-info}/RECORD +56 -44
- test/new-results/partition-new-simu/fasttree/iclust-0/log +2 -2
- test/new-results/run-times.csv +6 -6
- test/new-results/test.log +17 -17
- test/paired/new-results/partition-new-simu/fasttree/iclust-1/log +1 -1
- test/paired/new-results/partition-new-simu/fasttree/iclust-2/log +1 -1
- test/paired/new-results/partition-new-simu/igh+igk/partition-igh/fasttree/iclust-1/log +1 -1
- test/paired/new-results/partition-new-simu-annotation-performance/plots/flcount-matrix.svg +107 -107
- test/paired/new-results/partition-new-simu-annotation-performance/plots/func-non-func-per-drop-log.svg +83 -83
- test/paired/new-results/partition-new-simu-annotation-performance/plots/func-non-func-per-drop.svg +61 -61
- test/paired/new-results/partition-new-simu-annotation-performance/plots/paired-seqs-per-seq-after.svg +18 -18
- test/paired/new-results/partition-new-simu-annotation-performance/plots/paired-seqs-per-seq-before.svg +24 -24
- test/paired/new-results/partition-new-simu-annotation-performance/plots/pseq-matrix.svg +35 -35
- test/paired/new-results/partition-new-simu-annotation-performance/plots/seqs-per-droplet.svg +22 -22
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-correct-family.svg +45 -45
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-correct.svg +45 -45
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-mispaired.svg +45 -45
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-multiple.svg +15 -15
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-near-family.svg +15 -15
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-total.svg +47 -47
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance-unpaired.svg +48 -48
- test/paired/new-results/partition-new-simu-annotation-performance/plots/true-pair-clean-performance.svg +27 -27
- test/paired/new-results/run-times.csv +7 -7
- test/paired/new-results/subset-partition-new-simu/isub-0/partition.log +5 -5
- test/paired/new-results/subset-partition-new-simu/isub-1/partition.log +5 -5
- test/paired/new-results/subset-partition-new-simu/merged-partition.log +4 -4
- test/paired/new-results/subset-partition-new-simu/merged-subsets/parameters/igh/sw-cache.yaml +1 -1
- test/paired/new-results/subset-partition-new-simu/merged-subsets/parameters/igk/sw-cache.yaml +1 -1
- test/paired/new-results/subset-partition-new-simu/merged-subsets/parameters/igl/sw-cache.yaml +1 -1
- test/paired/new-results/test.log +74 -74
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/cf-alleles.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/cf-germlines.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/compare-plotdirs.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/extract-pairing-info.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/gctree-run.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/get-naive-probabilities.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/parse-output.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/partis-test.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.data → partis_bcr-1.0.12.post1.dev4.data}/scripts/split-loci.py +0 -0
- {partis_bcr-1.0.12.post1.dev2.dist-info → partis_bcr-1.0.12.post1.dev4.dist-info}/WHEEL +0 -0
- {partis_bcr-1.0.12.post1.dev2.dist-info → partis_bcr-1.0.12.post1.dev4.dist-info}/entry_points.txt +0 -0
- {partis_bcr-1.0.12.post1.dev2.dist-info → partis_bcr-1.0.12.post1.dev4.dist-info}/licenses/COPYING +0 -0
- {partis_bcr-1.0.12.post1.dev2.dist-info → partis_bcr-1.0.12.post1.dev4.dist-info}/top_level.txt +0 -0
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<g id="ytick_4">
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<use xlink:href="#
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<use xlink:href="#ma80e5c66f0" x="82.944" y="127.1808" style="fill: #262626; stroke: #262626; stroke-width: 0.8"/>
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<g id="text_10">
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@@ -153,7 +153,7 @@ L -3.5 0
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<g id="ytick_5">
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<use xlink:href="#
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<use xlink:href="#ma80e5c66f0" x="82.944" y="77.4144" style="fill: #262626; stroke: #262626; stroke-width: 0.8"/>
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@@ -163,7 +163,7 @@ L -3.5 0
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<g id="ytick_6">
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<use xlink:href="#ma80e5c66f0" x="82.944" y="27.648" style="fill: #262626; stroke: #262626; stroke-width: 0.8"/>
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<g id="text_12">
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