parsl 2024.6.17__py3-none-any.whl → 2024.7.1__py3-none-any.whl

parsl/app/bash.py

@@ -1,5 +1,5 @@
 import logging
-from functools import partial, update_wrapper
+from functools import partial
 from inspect import Parameter, signature
 
 from parsl.app.app import AppBase
@@ -123,11 +123,10 @@ class BashApp(AppBase):
             if sig.parameters[s].default is not Parameter.empty:
                 self.kwargs[s] = sig.parameters[s].default
 
-        # update_wrapper allows remote_side_bash_executor to masquerade as self.func
         # partial is used to attach the first arg the "func" to the remote_side_bash_executor
         # this is done to avoid passing a function type in the args which parsl.serializer
         # doesn't support
-        remote_fn = partial(update_wrapper(remote_side_bash_executor, self.func), self.func)
+        remote_fn = partial(remote_side_bash_executor, self.func)
         remote_fn.__name__ = self.func.__name__
         self.wrapped_remote_function = wrap_error(remote_fn)
 

parsl/channels/local/local.py

@@ -55,6 +55,7 @@ class LocalChannel(Channel, RepresentationMixin):
         current_env.update(envs)
 
         try:
+            logger.debug("Creating process with command '%s'", cmd)
             proc = subprocess.Popen(
                 cmd,
                 stdout=subprocess.PIPE,
@@ -64,12 +65,16 @@ class LocalChannel(Channel, RepresentationMixin):
                 shell=True,
                 preexec_fn=os.setpgrp
             )
+            logger.debug("Created process with pid %s. Performing communicate", proc.pid)
             (stdout, stderr) = proc.communicate(timeout=walltime)
             retcode = proc.returncode
+            logger.debug("Process %s returned %s", proc.pid, proc.returncode)
 
-        except Exception as e:
-            logger.warning("Execution of command '{}' failed due to \n{}".format(cmd, e))
+        except Exception:
+            logger.exception(f"Execution of command failed:\n{cmd}")
             raise
+        else:
+            logger.debug("Execution of command in process %s completed normally", proc.pid)
 
         return (retcode, stdout.decode("utf-8"), stderr.decode("utf-8"))
 

parsl/configs/ASPIRE1.py

@@ -4,6 +4,7 @@ from parsl.executors import HighThroughputExecutor
 from parsl.launchers import MpiRunLauncher
 from parsl.monitoring.monitoring import MonitoringHub
 from parsl.providers import PBSProProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
         executors=[
@@ -39,5 +40,6 @@ config = Config(
         strategy='simple',
         retries=3,
         app_cache=True,
-        checkpoint_mode='task_exit'
+        checkpoint_mode='task_exit',
+        usage_tracking=LEVEL_1,
 )

parsl/configs/Azure.py

@@ -8,6 +8,7 @@ from parsl.data_provider.http import HTTPInTaskStaging
 from parsl.data_provider.rsync import RSyncStaging
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import AzureProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 vm_reference = {
     # All fields below are required
@@ -33,5 +34,6 @@ config = Config(
                             FTPInTaskStaging(),
                             RSyncStaging(getpass.getuser() + "@" + address_by_query())],
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/ad_hoc.py

@@ -4,6 +4,7 @@ from parsl.channels import SSHChannel
 from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import AdHocProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 user_opts: Dict[str, Dict[str, Any]]
 user_opts = {'adhoc':
@@ -33,4 +34,5 @@ config = Config(
     ],
     #  AdHoc Clusters should not be setup with scaling strategy.
     strategy='none',
+    usage_tracking=LEVEL_1,
 )

parsl/configs/bridges.py

@@ -3,6 +3,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 """ This config assumes that it is used to launch parsl tasks from the login nodes
 of Bridges at PSC. Each job submitted to the scheduler will request 2 nodes for 10 minutes.
@@ -34,5 +35,6 @@ config = Config(
                 cmd_timeout=120,
             ),
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/cc_in2p3.py

@@ -2,6 +2,7 @@ from parsl.channels import LocalChannel
 from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import GridEngineProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -19,4 +20,5 @@ config = Config(
             ),
         )
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/ec2.py

@@ -1,6 +1,7 @@
 from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import AWSProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -25,4 +26,5 @@ config = Config(
             ),
         )
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/expanse.py

@@ -2,6 +2,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -24,5 +25,6 @@ config = Config(
                 nodes_per_block=2,
             ),
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/frontera.py

@@ -3,6 +3,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 """ This config assumes that it is used to launch parsl tasks from the login nodes
 of Frontera at TACC. Each job submitted to the scheduler will request 2 nodes for 10 minutes.
@@ -32,4 +33,5 @@ config = Config(
             ),
         )
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/htex_local.py

@@ -2,6 +2,7 @@ from parsl.channels import LocalChannel
 from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import LocalProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -15,4 +16,5 @@ config = Config(
             ),
         )
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/illinoiscluster.py

@@ -2,6 +2,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 """ This config assumes that it is used to launch parsl tasks from the login nodes
 of the Campus Cluster at UIUC. Each job submitted to the scheduler will request 2 nodes for 10 minutes.
@@ -25,4 +26,5 @@ config = Config(
                ),
           )
      ],
+     usage_tracking=LEVEL_1,
 )

parsl/configs/kubernetes.py

@@ -2,6 +2,7 @@ from parsl.addresses import address_by_route
 from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import KubernetesProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -36,5 +37,6 @@ config = Config(
                 max_blocks=10,
             ),
         ),
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/local_threads.py

@@ -1,4 +1,8 @@
 from parsl.config import Config
 from parsl.executors.threads import ThreadPoolExecutor
+from parsl.usage_tracking.levels import LEVEL_1
 
-config = Config(executors=[ThreadPoolExecutor()])
+config = Config(
+    executors=[ThreadPoolExecutor()],
+    usage_tracking=LEVEL_1,
+)

parsl/configs/midway.py

@@ -3,6 +3,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -28,4 +29,5 @@ config = Config(
             ),
         )
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/osg.py

@@ -1,6 +1,7 @@
 from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.providers import CondorProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -26,5 +27,6 @@ python3 -m venv parsl_env; source parsl_env/bin/activate; python3 -m pip install
             worker_logdir_root='$OSG_WN_TMP',
             worker_ports=(31000, 31001)
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/polaris.py

@@ -3,6 +3,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import MpiExecLauncher
 from parsl.providers import PBSProProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 # There are three user parameters to change for the PBSProProvider:
 #  YOUR_ACCOUNT: Account to charge usage
@@ -34,5 +35,6 @@ config = Config(
                 cpus_per_node=64,
             ),
         ),
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/stampede2.py

@@ -4,6 +4,7 @@ from parsl.data_provider.globus import GlobusStaging
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -34,4 +35,5 @@ config = Config(
         )
 
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/summit.py

@@ -3,6 +3,7 @@ from parsl.config import Config
 from parsl.executors import HighThroughputExecutor
 from parsl.launchers import JsrunLauncher
 from parsl.providers import LSFProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -26,4 +27,5 @@ config = Config(
         )
 
     ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/toss3_llnl.py

@@ -2,6 +2,7 @@ from parsl.config import Config
 from parsl.executors import FluxExecutor
 from parsl.launchers import SrunLauncher
 from parsl.providers import SlurmProvider
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -24,5 +25,6 @@ config = Config(
                 cmd_timeout=120,
             ),
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/vineex_local.py

@@ -2,6 +2,7 @@ import uuid
 
 from parsl.config import Config
 from parsl.executors.taskvine import TaskVineExecutor, TaskVineManagerConfig
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -15,5 +16,6 @@ config = Config(
             # To disable status reporting, comment out the project_name.
             manager_config=TaskVineManagerConfig(project_name="parsl-vine-" + str(uuid.uuid4())),
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/configs/wqex_local.py

@@ -2,6 +2,7 @@ import uuid
 
 from parsl.config import Config
 from parsl.executors import WorkQueueExecutor
+from parsl.usage_tracking.levels import LEVEL_1
 
 config = Config(
     executors=[
@@ -21,5 +22,6 @@ config = Config(
             # A shared filesystem is not needed when using Work Queue.
             shared_fs=False
         )
-    ]
+    ],
+    usage_tracking=LEVEL_1,
 )

parsl/executors/high_throughput/errors.py

@@ -1,3 +1,36 @@
+import time
+
+
+class ManagerLost(Exception):
+    """
+    Task lost due to manager loss.  Manager is considered lost when multiple heartbeats
+    have been missed.
+    """
+    def __init__(self, manager_id: bytes, hostname: str) -> None:
+        self.manager_id = manager_id
+        self.tstamp = time.time()
+        self.hostname = hostname
+
+    def __str__(self) -> str:
+        return (
+            f"Task failure due to loss of manager {self.manager_id.decode()} on"
+            f" host {self.hostname}"
+        )
+
+
+class VersionMismatch(Exception):
+    """Manager and Interchange versions do not match"""
+    def __init__(self, interchange_version: str, manager_version: str):
+        self.interchange_version = interchange_version
+        self.manager_version = manager_version
+
+    def __str__(self) -> str:
+        return (
+            f"Manager version info {self.manager_version} does not match interchange"
+            f" version info {self.interchange_version}, causing a critical failure"
+        )
+
+
 class WorkerLost(Exception):
     """Exception raised when a worker is lost
     """

parsl/executors/high_throughput/executor.py

@@ -551,6 +551,7 @@ class HighThroughputExecutor(BlockProviderExecutor, RepresentationMixin, UsageIn
         logger.debug("Popened interchange process. Writing config object")
         stdin.write(config_pickle)
         stdin.flush()
+        stdin.close()
         logger.debug("Sent config object. Requesting worker ports")
         try:
             (self.worker_task_port, self.worker_result_port) = self.command_client.run("WORKER_PORTS", timeout_s=120)

parsl/executors/high_throughput/interchange.py

@@ -17,6 +17,7 @@ import zmq
 
 from parsl import curvezmq
 from parsl.app.errors import RemoteExceptionWrapper
+from parsl.executors.high_throughput.errors import ManagerLost, VersionMismatch
 from parsl.executors.high_throughput.manager_record import ManagerRecord
 from parsl.monitoring.message_type import MessageType
 from parsl.process_loggers import wrap_with_logs
@@ -31,32 +32,6 @@ LOGGER_NAME = "interchange"
 logger = logging.getLogger(LOGGER_NAME)
 
 
-class ManagerLost(Exception):
-    ''' Task lost due to manager loss. Manager is considered lost when multiple heartbeats
-    have been missed.
-    '''
-    def __init__(self, manager_id: bytes, hostname: str) -> None:
-        self.manager_id = manager_id
-        self.tstamp = time.time()
-        self.hostname = hostname
-
-    def __str__(self) -> str:
-        return "Task failure due to loss of manager {} on host {}".format(self.manager_id.decode(), self.hostname)
-
-
-class VersionMismatch(Exception):
-    ''' Manager and Interchange versions do not match
-    '''
-    def __init__(self, interchange_version: str, manager_version: str):
-        self.interchange_version = interchange_version
-        self.manager_version = manager_version
-
-    def __str__(self) -> str:
-        return "Manager version info {} does not match interchange version info {}, causing a critical failure".format(
-            self.manager_version,
-            self.interchange_version)
-
-
 class Interchange:
     """ Interchange is a task orchestrator for distributed systems.
 

parsl/executors/workqueue/executor.py

@@ -215,6 +215,13 @@ class WorkQueueExecutor(BlockProviderExecutor, putils.RepresentationMixin):
             This requires a version of Work Queue / cctools after commit
             874df524516441da531b694afc9d591e8b134b73 (release 7.5.0 is too early).
             Default is False.
+
+        scaling_cores_per_worker: int
+            When using Parsl scaling, this specifies the number of cores that a
+            worker is expected to have available for computation. Default 1. This
+            parameter can be ignored when using a fixed number of blocks, or when
+            using one task per worker (by omitting a ``cores`` resource
+            specifiation for each task).
     """
 
     radio_mode = "filesystem"
@@ -244,12 +251,14 @@ class WorkQueueExecutor(BlockProviderExecutor, putils.RepresentationMixin):
                  full_debug: bool = True,
                  worker_executable: str = 'work_queue_worker',
                  function_dir: Optional[str] = None,
-                 coprocess: bool = False):
+                 coprocess: bool = False,
+                 scaling_cores_per_worker: int = 1):
         BlockProviderExecutor.__init__(self, provider=provider,
                                        block_error_handler=True)
         if not _work_queue_enabled:
             raise OptionalModuleMissing(['work_queue'], "WorkQueueExecutor requires the work_queue module.")
 
+        self.scaling_cores_per_worker = scaling_cores_per_worker
         self.label = label
         self.task_queue = multiprocessing.Queue()  # type: multiprocessing.Queue
         self.collector_queue = multiprocessing.Queue()  # type: multiprocessing.Queue
@@ -469,6 +478,8 @@ class WorkQueueExecutor(BlockProviderExecutor, putils.RepresentationMixin):
         # Create a Future object and have it be mapped from the task ID in the tasks dictionary
         fu = Future()
         fu.parsl_executor_task_id = executor_task_id
+        assert isinstance(resource_specification, dict)
+        fu.resource_specification = resource_specification
         logger.debug("Getting tasks_lock to set WQ-level task entry")
         with self.tasks_lock:
             logger.debug("Got tasks_lock to set WQ-level task entry")
@@ -654,20 +665,29 @@ class WorkQueueExecutor(BlockProviderExecutor, putils.RepresentationMixin):
 
     @property
     def outstanding(self) -> int:
-        """Count the number of outstanding tasks. This is inefficiently
+        """Count the number of outstanding slots required. This is inefficiently
         implemented and probably could be replaced with a counter.
         """
+        logger.debug("Calculating outstanding task slot load")
         outstanding = 0
+        tasks = 0  # only for log message...
         with self.tasks_lock:
             for fut in self.tasks.values():
                 if not fut.done():
-                    outstanding += 1
-        logger.debug(f"Counted {outstanding} outstanding tasks")
+                    # if a task does not specify a core count, Work Queue will allocate an entire
+                    # worker node to that task. That's approximated here by saying that it uses
+                    # scaling_cores_per_worker.
+                    resource_spec = getattr(fut, 'resource_specification', {})
+                    cores = resource_spec.get('cores', self.scaling_cores_per_worker)
+
+                    outstanding += cores
+                    tasks += 1
+        logger.debug(f"Counted {tasks} outstanding tasks with {outstanding} outstanding slots")
         return outstanding
 
     @property
     def workers_per_node(self) -> Union[int, float]:
-        return 1
+        return self.scaling_cores_per_worker
 
     def scale_in(self, count: int) -> List[str]:
         """Scale in method.

parsl/tests/test_bash_apps/test_memoize_ignore_args.py

@@ -1,7 +1,5 @@
 import os
 
-import pytest
-
 import parsl
 from parsl.app.app import bash_app
 
@@ -23,24 +21,18 @@ def no_checkpoint_stdout_app_ignore_args(stdout=None):
     return "echo X"
 
 
-def test_memo_stdout():
+def test_memo_stdout(tmpd_cwd):
+    path_x = tmpd_cwd / "test.memo.stdout.x"
 
     # this should run and create a file named after path_x
-    path_x = "test.memo.stdout.x"
-    if os.path.exists(path_x):
-        os.remove(path_x)
-
-    no_checkpoint_stdout_app_ignore_args(stdout=path_x).result()
-    assert os.path.exists(path_x)
-
-    # this should be memoized, so not create benc.test.y
-    path_y = "test.memo.stdout.y"
+    no_checkpoint_stdout_app_ignore_args(stdout=str(path_x)).result()
+    assert path_x.exists()
 
-    if os.path.exists(path_y):
-        os.remove(path_y)
+    # this should be memoized, so should not get created
+    path_y = tmpd_cwd / "test.memo.stdout.y"
 
     no_checkpoint_stdout_app_ignore_args(stdout=path_y).result()
-    assert not os.path.exists(path_y)
+    assert not path_y.exists(), "For memoization, expected NO file written"
 
     # this should also be memoized, so not create an arbitrary name
     z_fut = no_checkpoint_stdout_app_ignore_args(stdout=parsl.AUTO_LOGNAME)

parsl/tests/test_bash_apps/test_memoize_ignore_args_regr.py

@@ -1,5 +1,4 @@
 import copy
-import os
 from typing import List
 
 import pytest
@@ -30,21 +29,17 @@ def no_checkpoint_stdout_app(stdout=None):
     return "echo X"
 
 
-def test_memo_stdout():
-
+def test_memo_stdout(tmpd_cwd):
     assert const_list_x == const_list_x_arg
 
-    path_x = "test.memo.stdout.x"
-    if os.path.exists(path_x):
-        os.remove(path_x)
+    path_x = tmpd_cwd / "test.memo.stdout.x"
 
     # this should run and create a file named after path_x
-    no_checkpoint_stdout_app(stdout=path_x).result()
-    assert os.path.exists(path_x)
+    no_checkpoint_stdout_app(stdout=str(path_x)).result()
+    path_x.unlink(missing_ok=False)
 
-    os.remove(path_x)
-    no_checkpoint_stdout_app(stdout=path_x).result()
-    assert not os.path.exists(path_x)
+    no_checkpoint_stdout_app(stdout=str(path_x)).result()
+    assert not path_x.exists(), "For memoization, expected NO file written"
 
     # this should also be memoized, so not create an arbitrary name
     z_fut = no_checkpoint_stdout_app(stdout=parsl.AUTO_LOGNAME)

parsl/tests/test_error_handling/test_retries.py

@@ -1,9 +1,7 @@
-import argparse
 import os
 
 import pytest
 
-import parsl
 from parsl import bash_app, python_app
 from parsl.tests.configs.local_threads import fresh_config
 
@@ -68,8 +66,6 @@ def test_fail_nowait(numtasks=10):
         assert isinstance(
             e, TypeError), "Expected a TypeError, got {}".format(e)
 
-    print("Done")
-
 
 @pytest.mark.local
 def test_fail_delayed(numtasks=10):
@@ -94,19 +90,12 @@ def test_fail_delayed(numtasks=10):
         assert isinstance(
             e, TypeError), "Expected a TypeError, got {}".format(e)
 
-    print("Done")
-
 
 @pytest.mark.local
-def test_retry():
+def test_retry(tmpd_cwd):
     """Test retries via app that succeeds on the Nth retry.
     """
 
-    fname = "retry.out"
-    try:
-        os.remove(fname)
-    except OSError:
-        pass
-    fu = succeed_on_retry(fname)
-
-    fu.result()
+    fpath = tmpd_cwd / "retry.out"
+    sout = str(tmpd_cwd / "stdout")
+    succeed_on_retry(str(fpath), stdout=sout).result()

parsl/tests/test_serialization/test_3495_deserialize_managerlost.py

@@ -0,0 +1,47 @@
+import os
+import signal
+
+import pytest
+
+import parsl
+from parsl import Config, HighThroughputExecutor
+from parsl.executors.high_throughput.errors import ManagerLost
+
+
+@parsl.python_app
+def get_manager_pgid():
+    import os
+    return os.getpgid(os.getpid())
+
+
+@parsl.python_app
+def lose_manager():
+    import os
+    import signal
+
+    manager_pid = os.getppid()
+    os.kill(manager_pid, signal.SIGSTOP)
+
+
+@pytest.mark.local
+def test_manager_lost_system_failure(tmpd_cwd):
+    hte = HighThroughputExecutor(
+        label="htex_local",
+        address="127.0.0.1",
+        max_workers_per_node=2,
+        cores_per_worker=1,
+        worker_logdir_root=str(tmpd_cwd),
+        heartbeat_period=1,
+        heartbeat_threshold=1,
+    )
+    c = Config(executors=[hte], strategy='simple', strategy_period=0.1)
+
+    with parsl.load(c):
+        manager_pgid = get_manager_pgid().result()
+        try:
+            with pytest.raises(ManagerLost):
+                lose_manager().result()
+        finally:
+            # Allow process to clean itself up
+            os.killpg(manager_pgid, signal.SIGCONT)
+            os.killpg(manager_pgid, signal.SIGTERM)

parsl/tests/test_staging/test_file.py

@@ -22,11 +22,11 @@ def test_files():
 
 
 @pytest.mark.local
-def test_open():
-    with open('test-open.txt', 'w') as tfile:
-        tfile.write('Hello')
+def test_open(tmpd_cwd):
+    fpath = tmpd_cwd / 'test-open.txt'
+    fpath.write_text('Hello')
 
-    pfile = File('test-open.txt')
+    pfile = File(fpath)
 
-    with open(str(pfile), 'r') as opfile:
-        assert (opfile.readlines()[0] == 'Hello')
+    with open(pfile) as opfile:
+        assert (opfile.read() == 'Hello')

parsl/version.py

@@ -3,4 +3,4 @@
 Year.Month.Day[alpha/beta/..]
 Alphas will be numbered like this -> 2024.12.10a0
 """
-VERSION = '2024.06.17'
+VERSION = '2024.07.01'

{parsl-2024.6.17.data → parsl-2024.7.1.data}/scripts/interchange.py

@@ -17,6 +17,7 @@ import zmq
 
 from parsl import curvezmq
 from parsl.app.errors import RemoteExceptionWrapper
+from parsl.executors.high_throughput.errors import ManagerLost, VersionMismatch
 from parsl.executors.high_throughput.manager_record import ManagerRecord
 from parsl.monitoring.message_type import MessageType
 from parsl.process_loggers import wrap_with_logs
@@ -31,32 +32,6 @@ LOGGER_NAME = "interchange"
 logger = logging.getLogger(LOGGER_NAME)
 
 
-class ManagerLost(Exception):
-    ''' Task lost due to manager loss. Manager is considered lost when multiple heartbeats
-    have been missed.
-    '''
-    def __init__(self, manager_id: bytes, hostname: str) -> None:
-        self.manager_id = manager_id
-        self.tstamp = time.time()
-        self.hostname = hostname
-
-    def __str__(self) -> str:
-        return "Task failure due to loss of manager {} on host {}".format(self.manager_id.decode(), self.hostname)
-
-
-class VersionMismatch(Exception):
-    ''' Manager and Interchange versions do not match
-    '''
-    def __init__(self, interchange_version: str, manager_version: str):
-        self.interchange_version = interchange_version
-        self.manager_version = manager_version
-
-    def __str__(self) -> str:
-        return "Manager version info {} does not match interchange version info {}, causing a critical failure".format(
-            self.manager_version,
-            self.interchange_version)
-
-
 class Interchange:
     """ Interchange is a task orchestrator for distributed systems.
 

{parsl-2024.6.17.dist-info → parsl-2024.7.1.dist-info}/METADATA

@@ -1,9 +1,9 @@
 Metadata-Version: 2.1
 Name: parsl
-Version: 2024.6.17
+Version: 2024.7.1
 Summary: Simple data dependent workflows in Python
 Home-page: https://github.com/Parsl/parsl
-Download-URL: https://github.com/Parsl/parsl/archive/2024.06.17.tar.gz
+Download-URL: https://github.com/Parsl/parsl/archive/2024.07.01.tar.gz
 Author: The Parsl Team
 Author-email: parsl@googlegroups.com
 License: Apache 2.0

{parsl-2024.6.17.dist-info → parsl-2024.7.1.dist-info}/RECORD

@@ -8,10 +8,10 @@ parsl/multiprocessing.py,sha256=MyaEcEq-Qf860u7V98u-PZrPNdtzOZL_NW6EhIJnmfQ,1937
 parsl/process_loggers.py,sha256=uQ7Gd0W72Jz7rrcYlOMfLsAEhkRltxXJL2MgdduJjEw,1136
 parsl/py.typed,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/utils.py,sha256=91FjQiTUY383ueAjkBAgE21My9nba6SP2a2SrbB1r1Q,11250
-parsl/version.py,sha256=bW2OSs-fGwn8vVUB6s290nY4Qe21tYD0iIBDkqvY198,131
+parsl/version.py,sha256=rymKA_7RPC0NJoPK5DYnRc2K1WmH8LD0xsv3iQyTwDA,131
 parsl/app/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/app/app.py,sha256=D5Ok_gt99mlclM_QfZbquHUBkibyG4tYdUN9ijRwUnQ,8345
-parsl/app/bash.py,sha256=iTpWH1K5E0e60nH23bwl97zNgg5BssFIqfp-182wkjA,5656
+parsl/app/bash.py,sha256=jm2AvePlCT9DZR7H_4ANDWxatp5dN_22FUlT_gWhZ-g,5528
 parsl/app/errors.py,sha256=nJmOEPglAISfD3R1UsTZH-avqiSOJgx_DkpdL9B591w,3917
 parsl/app/futures.py,sha256=XU1NwkoNVsxy3KF5y0Ihsla5hPbhhuSikZInfS7h7Uo,2910
 parsl/app/python.py,sha256=0hrz2BppVOwwNfh5hnoP70Yv56gSRkIoT-fP9XNb4v4,2331
@@ -21,7 +21,7 @@ parsl/channels/__init__.py,sha256=DNFoy_e_vhNTABHVzo4nWilvBYe9W4Na6jj4vYf9El4,37
 parsl/channels/base.py,sha256=bS43-Qv4VSxa83V6fJ54lNBL_eHCu-Ce7-aoy1C9vCc,4193
 parsl/channels/errors.py,sha256=Dp0FhtHpygn0IjX8nGurx-WrTJm9aw-Jjz3SSUT-jCc,3283
 parsl/channels/local/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-parsl/channels/local/local.py,sha256=YWJdsLBTG6Ri01pd_28Ha1ZkgdbrPpxCEOdRLOmnavs,4995
+parsl/channels/local/local.py,sha256=xqH4HnipUN95NgvyB1r33SiqgQKkARgRKmg0_HnumUk,5311
 parsl/channels/oauth_ssh/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/channels/oauth_ssh/oauth_ssh.py,sha256=GrVOpJ6M6BwtGG4zOU4zakyphzuGY5M3suQ8PyjwyOA,3509
 parsl/channels/ssh/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -29,27 +29,27 @@ parsl/channels/ssh/ssh.py,sha256=pwbekDM55dwQHrWwNk5wXcQUAf7cGmRahAwZQ89lxDw,950
 parsl/channels/ssh_il/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/channels/ssh_il/ssh_il.py,sha256=5XjotlA83UM4zGfnVriC9pE2NzaCT5hqvXZ9v4GG3pg,2410
 parsl/concurrent/__init__.py,sha256=TvIVceJYaJAsxedNBF3Vdo9lEQNHH_j3uxJv0zUjP7w,3288
-parsl/configs/ASPIRE1.py,sha256=nQ8Sa-hHyT7Pr4pC15iBcM4rEXRAq_DhpiWoH7Htkug,1637
-parsl/configs/Azure.py,sha256=RTwyvzGY5F5yiTCCzQYy2Hs4PZk2J0PoYeJLDnuFu_M,1191
+parsl/configs/ASPIRE1.py,sha256=eKnmz0QD3V522emtXMjS6Ppeooe5lzcBgCE6cxunbYY,1718
+parsl/configs/Azure.py,sha256=CJms3xWmdb-S3CksbHrPF2TfMxJC5I0faqUKCOzVg0k,1268
 parsl/configs/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-parsl/configs/ad_hoc.py,sha256=Ju7rvpJd55x1_hnsBoKBHb6vLemFnY5O9bzcT5ZyGII,1276
-parsl/configs/bridges.py,sha256=4-DUwDaiSvtwyxZLnMFwudNh2UJglTDYB1ZxyojYn8E,1446
-parsl/configs/cc_in2p3.py,sha256=Owa6d_kw0NeLYy12UD8JHWr64xuUTEgeiSraaFFGfNg,709
-parsl/configs/ec2.py,sha256=JVSe3p5DpV0wjBaZJknVzUX0lhpkWOsu8SzECfaZs3Y,868
-parsl/configs/expanse.py,sha256=HNdJdg52xC0GycX7nz7MiumqFPpNNyPVAwZreVZISmQ,956
-parsl/configs/frontera.py,sha256=1aExG0qoNwYlJPCQpwH9OwEsAnO8zkMMPesunvOxXdg,1419
-parsl/configs/htex_local.py,sha256=z0X_rMC4A8qUS6VgFXWZ4_iPPCUT8CkSaDORK0_fSn0,466
-parsl/configs/illinoiscluster.py,sha256=bxQ1bcWGk2EikAvE4s4Sz5FG8QOra3RSfiB2Z8l0oDI,1093
-parsl/configs/kubernetes.py,sha256=3WcoG_pq9FHcLvY2IbXYX7_vaiMlCuch7buQJKod75s,1248
-parsl/configs/local_threads.py,sha256=RbqOr2ELWBDFwmCCbvmyd4zEJDvonQGRbs7Apc6cy9g,138
-parsl/configs/midway.py,sha256=zZOV512IrKJllDXgZ5DkbLD3i8djicbkt1xFgW96ETE,1145
-parsl/configs/osg.py,sha256=5ikeEzc70797pjWT8C7m77XHyyTJ2DFfL4Njk0hN0Rs,1143
-parsl/configs/polaris.py,sha256=SZ-XJmPoFQKDl4p8hc-Nr5Zt2lg-XM82Bf7URxI9ZwY,1654
-parsl/configs/stampede2.py,sha256=dIfatCJPUwW68o1ud09fNM3uC5brqyuHGBkbrJcDeME,1329
-parsl/configs/summit.py,sha256=gXiBSt5QztvqGEm89WRhkTK0P1NThXsAi9EqxqYZMM0,1077
-parsl/configs/toss3_llnl.py,sha256=iaUbhWkywGObbIaNLsAihP560F185rrjpVfjkM6lBDQ,997
-parsl/configs/vineex_local.py,sha256=IyqD-VnUefJYhz0XE1Ik0DKgCgqGHKD3NRXXfayobz8,660
-parsl/configs/wqex_local.py,sha256=cjqaUHL9SfL45hgl1Gg6DjhGDbFMHeuTlzVeF367FZQ,794
+parsl/configs/ad_hoc.py,sha256=Gwnehd5_K6IzUSPECHnNBljyO-LQ9fyaBClHiT_myp8,1352
+parsl/configs/bridges.py,sha256=NsTvCiHZHbJj-BsOXOpgS4hCblCHW_lnMa_VMb3SIww,1523
+parsl/configs/cc_in2p3.py,sha256=T9PjUt2OFFv3w2uXFeKfIDmE7j_nllD3jVouvCmPrCc,785
+parsl/configs/ec2.py,sha256=5xtlZI4Fc558sYXdM4nQQvQDBNPdzhRRCO14F-8H7Y4,944
+parsl/configs/expanse.py,sha256=ADUY3GZWSfVKmqFWbgdfC85kRxNPChqOGwly0XdcKSw,1033
+parsl/configs/frontera.py,sha256=6n0TMvF2IFdJ3g5NdFcM-rg5Na_6dDroF0ZIozk3-LU,1495
+parsl/configs/htex_local.py,sha256=v6VG9UoWoosy3ls66lToTyGahZFjoLb5ni0nVWKfKNY,542
+parsl/configs/illinoiscluster.py,sha256=ZR22A8uwFb8tzSzmU1D0kR0qcr5Thr0j-7Nb5hiCgQ8,1170
+parsl/configs/kubernetes.py,sha256=s6ABVRwHEKsIFi-w9gc5OK-P0UDmlAZsoHc6OZ3oOD4,1325
+parsl/configs/local_threads.py,sha256=I1VFfGo2TMTrBL9g_rlG3TEqEWkhL-AHpkqJ3lvcTf8,221
+parsl/configs/midway.py,sha256=An2Z-TbL3b6AP3uQwauxtUqZaYO2CtUiP8XH05hpWks,1221
+parsl/configs/osg.py,sha256=OVpR2Q33EL6OYGRyj-VpfpbGDhRwGAu3_rT388n1UaY,1220
+parsl/configs/polaris.py,sha256=rbUdeFC-R4YGcs3cShfs66IuZEKyBx_sFrVdjje_l_g,1731
+parsl/configs/stampede2.py,sha256=2FTUZ6lQ-0_b0xtpDC6ZngFBhqc_vI45dHOSwrtzl3Y,1405
+parsl/configs/summit.py,sha256=wCiYDwNomgVAy79Of1_gywtEO0oajlgm9mOvUTBaGSc,1153
+parsl/configs/toss3_llnl.py,sha256=73ZckKIwTSd-DkAXtqg2U6l8ObPKMAJjs5CerUpJnsQ,1074
+parsl/configs/vineex_local.py,sha256=6T7A5zYOoEedRQHjRW8GAXzXLCPmSlWOfLfbJl0jZGU,737
+parsl/configs/wqex_local.py,sha256=XzjAvpHFaBSRVmSkbViTizKSkLR_2XXBP_zJ69KGBCg,871
 parsl/data_provider/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/data_provider/data_manager.py,sha256=2pbjNbf-WXAk2PRO_uGRGpH1dma5xfSw0YZpg1SdqHg,7319
 parsl/data_provider/file_noop.py,sha256=hxg6QNaBPsdTuio8jYJRkprXX9uuneMTXNCUe0YYP-E,498
@@ -79,9 +79,9 @@ parsl/executors/flux/execute_parsl_task.py,sha256=gRN7F4HhdrKQ-bvn4wXrquBzFOp_9W
 parsl/executors/flux/executor.py,sha256=gPq49CQwtSZYZggLZ0dCXdpUlllKHJbvR8WRKeGh9xE,16977
 parsl/executors/flux/flux_instance_manager.py,sha256=2KVcphlybF-ALYD_3_YjMUi0f5LkjdoJOT_783CW4H0,2036
 parsl/executors/high_throughput/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
-parsl/executors/high_throughput/errors.py,sha256=77ZGrw9suLh9tSWjyhCaIvnC9nRAOmrXsZmvHM6nT68,626
-parsl/executors/high_throughput/executor.py,sha256=iRmAdQpHpmC0UDC5jDZ0O-BlZe_RhfItlqL5RIiD7os,37039
-parsl/executors/high_throughput/interchange.py,sha256=6avQQ8Ljtmuzpa5yjClswqdVEBPDnNBeKb_yn0XbVW4,31462
+parsl/executors/high_throughput/errors.py,sha256=Sak8e8UpiEcXefUjMHbhyXc4Rn7kJtOoh7L8wreBQdk,1638
+parsl/executors/high_throughput/executor.py,sha256=XO0QkRdQIXYUOdabTTIJ6HIlMai0Tvu78bYHMFT-tNc,37061
+parsl/executors/high_throughput/interchange.py,sha256=IRuiaBmks_R4cU-Sx0Q_Fjv4PdFtzU05GiPdeJstOoA,30578
 parsl/executors/high_throughput/manager_record.py,sha256=9XppKjDW0DJ7SMkPNxsiDs-HvXGPLrTg6Ceyh4b6gNs,433
 parsl/executors/high_throughput/monitoring_info.py,sha256=HC0drp6nlXQpAop5PTUKNjdXMgtZVvrBL0JzZJebPP4,298
 parsl/executors/high_throughput/mpi_executor.py,sha256=B2CR1pHaGQzIwTrQ-_i08NZG-NwS6yr8y7nxPaa_rkA,3760
@@ -107,7 +107,7 @@ parsl/executors/taskvine/utils.py,sha256=iSrIogeiauL3UNy_9tiZp1cBSNn6fIJkMYQRVi1
 parsl/executors/workqueue/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/executors/workqueue/errors.py,sha256=XO2naYhAsHHyiOBH6hpObg3mPNDmvMoFqErsj0-v7jc,541
 parsl/executors/workqueue/exec_parsl_function.py,sha256=RUkJ4JSJAjr7YyRZ58zhMdg8cR5dVV9odUl3AuzNf3k,7802
-parsl/executors/workqueue/executor.py,sha256=X6mNMj-qP8uXZFJrNokIc2jJdq3tkGWdW4omtT79ATA,49272
+parsl/executors/workqueue/executor.py,sha256=K5q-poZU37LVF4YhX34jKVMIBw5jpBfQ1rUadgPeQBU,50519
 parsl/executors/workqueue/parsl_coprocess.py,sha256=cF1UmTgVLoey6QzBcbYgEiEsRidSaFfuO54f1HFw_EM,5737
 parsl/executors/workqueue/parsl_coprocess_stub.py,sha256=_bJmpPIgL42qM6bVzeEKt1Mn1trSP41rtJguXxPGfHI,735
 parsl/jobs/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
@@ -301,8 +301,8 @@ parsl/tests/test_bash_apps/test_error_codes.py,sha256=jJ3BwhFpvTGKElKyuiCMWFeBaV
 parsl/tests/test_bash_apps/test_keyword_overlaps.py,sha256=8bfN2qw4uXJsYquppR1lZQrYW834AZc3zjYIIHTfDoE,209
 parsl/tests/test_bash_apps/test_kwarg_storage.py,sha256=OMMD3sKSngBSjVCHK9wju0hHzszOqbYuWtscyMuh5_8,720
 parsl/tests/test_bash_apps/test_memoize.py,sha256=gFhDNFxdRv8DNtErbwtdEvAph6SDFPaWY0tABZGS4I4,1383
-parsl/tests/test_bash_apps/test_memoize_ignore_args.py,sha256=ffABk6psbjGYatZiUicb-BYLmzqnxbUCNhMh0h4Ctus,1322
-parsl/tests/test_bash_apps/test_memoize_ignore_args_regr.py,sha256=8geUkrr09Oc4ZfPklf-sHl5WErVjlfhuQvV7KJ_cOhM,1362
+parsl/tests/test_bash_apps/test_memoize_ignore_args.py,sha256=dCDvf_iVuU5aq5gLlOUwcCZTbWtNJ4Uj0Zjx1ZbBOhQ,1257
+parsl/tests/test_bash_apps/test_memoize_ignore_args_regr.py,sha256=3cMYYNhSncDshWfbbyMld5z1ZrJHPpxz_0u8DMBgRdA,1341
 parsl/tests/test_bash_apps/test_multiline.py,sha256=stpMEv2eopGG-ietxjUtD5gYMOVpwPdLauDizjUfTdA,1082
 parsl/tests/test_bash_apps/test_pipeline.py,sha256=1kQDD8-Dh5H9SKFcKHzN_mSrdxAV_VYzk8ZnDyna3l8,2444
 parsl/tests/test_bash_apps/test_std_uri.py,sha256=CvAt8BUhNl2pA5chq9YyhkD6eo2IUH6PjWfe3SQ-YRU,3752
@@ -330,7 +330,7 @@ parsl/tests/test_error_handling/test_fail.py,sha256=xx4TGWfL7le4cQ9nvnUkrlmKQJks
 parsl/tests/test_error_handling/test_python_walltime.py,sha256=rdmGZHIkuann2Njt3i62odKJ0FaODGr7-L96rOXNVYg,950
 parsl/tests/test_error_handling/test_rand_fail.py,sha256=crFg4GmwdDpvx49_7w5Xt2P7H2R_V9f6i1Ar-QkASuU,3864
 parsl/tests/test_error_handling/test_resource_spec.py,sha256=bk0h2KRZ1lKga_dfhkqq4-tvUJimPtO6gJikUzXJJrU,1565
-parsl/tests/test_error_handling/test_retries.py,sha256=Hgy-1y9nx-unB4KE2-Em3OUvdWxoYzAWq-EY7ImEgIE,2446
+parsl/tests/test_error_handling/test_retries.py,sha256=zJ9D2hrvXQURnK2OIf5LfQFcSDVZ8rhdpp6peGccY7s,2372
 parsl/tests/test_error_handling/test_retry_handler.py,sha256=8fMHffMBLhRyNreIqkrwamx9TYRZ498uVYNlkcbAoLU,1407
 parsl/tests/test_error_handling/test_retry_handler_failure.py,sha256=GaGtZZCB9Wb7ieShqTrxUFEUSKy07ZZWytCY4Qixk9Y,552
 parsl/tests/test_error_handling/test_serialization_fail.py,sha256=5nnGyaOH0Quyjo3eTKkDfAvYcNYxL8OfMi1KccyncaM,647
@@ -427,6 +427,7 @@ parsl/tests/test_scaling/test_scale_down_htex_unregistered.py,sha256=4DYZB9BMDzy
 parsl/tests/test_scaling/test_shutdown_scalein.py,sha256=Jzi0OH7UE6qvQ4ZpsfHu8lySpkMDgorn2elAzMNE6wI,2397
 parsl/tests/test_serialization/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU,0
 parsl/tests/test_serialization/test_2555_caching_deserializer.py,sha256=jEXJvbriaLVI7frV5t-iJRKYyeQ7a9_-t3X9lhhBWQo,767
+parsl/tests/test_serialization/test_3495_deserialize_managerlost.py,sha256=23phMEstEWWQUHxlyZh4Ta1DC94by8f_-OYCcykyNu8,1144
 parsl/tests/test_serialization/test_basic.py,sha256=4_1Rkq5tNl9EC0nfneF8kHTws7I0E6ovE_0DE97BEfU,544
 parsl/tests/test_serialization/test_htex_code_cache.py,sha256=dd0XwlNDn6Lgj6-nHHjYWzl1FnhFLY_8Buxj77dyZ28,1840
 parsl/tests/test_serialization/test_pack_resource_spec.py,sha256=-Vtyh8KyezZw8e7M2Z4m3LawY1Au4U-H3KRmVKXSut0,641
@@ -440,7 +441,7 @@ parsl/tests/test_staging/test_1316.py,sha256=eS0e2BDM2vmPNF60aDr35wcuGgDPfXjTjRV
 parsl/tests/test_staging/test_docs_1.py,sha256=HxFoBYRNkoJoCDIok9QEIDJLICmaF3RCklSWYtG8BEQ,628
 parsl/tests/test_staging/test_docs_2.py,sha256=DrxoUVowwzdQebewfyQ6v-IHVFJfs5qGzWVQ4UVSbkA,464
 parsl/tests/test_staging/test_elaborate_noop_file.py,sha256=8FHXraFrXDBB2wsKx15AQ6vOgpWwtDL6O6PejOkfdOM,2448
-parsl/tests/test_staging/test_file.py,sha256=Dqen1RJ-uLfzX8xIyJN2Qw3oVy4cFkQQVh6KC72xFDA,950
+parsl/tests/test_staging/test_file.py,sha256=Jsmn-4jaIuMz6ocmACMJmylx-thKky7QGWISkl4Mxjs,924
 parsl/tests/test_staging/test_file_apps.py,sha256=zTwLAf4R-lFLoqeyz9ZfFeVTs9PL9dmpKjeZEVG7C2s,1540
 parsl/tests/test_staging/test_file_staging.py,sha256=PTBZhTQJsNtUi38uUZOdIb8yw18-qxMoY9GFodzPYuE,674
 parsl/tests/test_staging/test_output_chain_filenames.py,sha256=9Mxfl9oU_x1ZSP8JSxT_t4WFCfDTprLjSeFNMm4vVxA,894
@@ -464,13 +465,13 @@ parsl/usage_tracking/__init__.py,sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hS
 parsl/usage_tracking/api.py,sha256=iaCY58Dc5J4UM7_dJzEEs871P1p1HdxBMtNGyVdzc9g,1821
 parsl/usage_tracking/levels.py,sha256=xbfzYEsd55KiZJ-mzNgPebvOH4rRHum04hROzEf41tU,291
 parsl/usage_tracking/usage.py,sha256=qNEJ7nPimqd3Y7OWFLdYmNwJ6XDKlyfV_fTzasxsQw8,8690
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